Larsson
FTDNA: 552270, BigY2: 552270MDKA Birth: Sweden
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 552270 | BigY2 552270 |
---|---|---|---|---|---|---|---|---|---|
21755804-G-A | 19593918-G-A | Y107410 | Y | Y | + | + | |||
13859991-T-A | 11739285-T-A | DYZ17 | ** | ||||||
26544646-T-A | 24398499-T-A | P1_g2 | ** | ||||||
13859994-T-G | 11739288-T-G | DYZ17 | ** | ||||||
13859990-A-G | 11739284-A-G | DYZ17 | ** | ||||||
13919225-AG-A | 11798519-AG-A | ** | |||||||
14463278-G-T | 12342551-G-T | ** | |||||||
14463284-G-T | 12342557-G-T | ** | |||||||
16729202-A-T | 14617322-A-T | ** | |||||||
18825653-T-G | 16713773-T-G | ** | |||||||
21464561-G-A | 19302675-G-A | ** | |||||||
15921675-C-A | 13809795-C-A | A7094 | ** | ||||||
26544663-G-T | 24398516-G-T | P1_g2 | ** | ||||||
28627353-G-A | 26481206-G-A | ** | |||||||
15252824-T-A | 13140910-T-A | ** | |||||||
15252823-C-A | 13140909-C-A | ** | |||||||
14639064-C-T | 12527133-C-T | 18×T | ** | ||||||
14463291-C-T | 12342564-C-T | 16×T | ** | ||||||
18895707-GAA-G | 16783827-GAA-G | 12×A | ** | ||||||
19529254-C-A | 17417374-C-A | ** | |||||||
15866203-T-A | 13754323-T-A | ** | |||||||
5358751-C-A | 5490710-C-A | ** | ** | ||||||
26204651-G-A | 24058504-G-A | P1_Y1 | ** | ||||||
19309422-C-CATATATAT | 17197542-C-CATATATAT | 19×AT | ** | ||||||
14463287-C-T | 12342560-C-T | ** | |||||||
24636427-C-T | 22490280-C-T | P3_t2 | ** | ||||||
26376486-C-A | 24230339-C-A | P1_Y1 | ** | ||||||
17367856-C-A | 15255976-C-A | ** | |||||||
13405096-G-T | 11249420-G-T | ** | |||||||
23126947-C-A | 20965061-C-A | ** | |||||||
13468244-G-A | 11312568-G-A | ** | |||||||
13468250-A-T | 11312574-A-T | ** | |||||||
13468300-T-C | 11312624-T-C | ** | |||||||
10785265-T-A | ** | ||||||||
10785270-T-TAG | ** | ||||||||
10808591-C-A | ** | ||||||||
10808602-A-T | ** | ||||||||
10808615-C-A | ** | ||||||||
10808617-A-G | ** | ||||||||
23421035-C-T | 21259149-C-T | ** | |||||||
10984474-C-T | ** | ||||||||
2855454-A-C | 2987413-A-C | ** | |||||||
10935544-C-A | ** | ||||||||
13962073-G-A | 11841367-G-A | ** | |||||||
17821825-G-GAA | 15709945-G-GAA | 17×A | ** | ||||||
10823113-G-C | ** | ||||||||
26010325-C-T | 23864178-C-T | P1_Y1 | ** | ||||||
10922013-C-A | ** | ||||||||
10994233-T-C | ** | ||||||||
10658485-A-T | ** | ||||||||
21133462-C-A | 18971576-C-A | ** | |||||||
13962069-TTG-T | 11841363-TTG-T | ** | |||||||
22113186-TCAA-T | 19951300-TCAA-T | ** | |||||||
10949448-C-A | ** | ||||||||
11010246-A-C | ** | ||||||||
11010278-C-G | ** | ||||||||
13486608-A-T | 11330932-A-T | ** | |||||||
7252239-A-G | 7384198-A-G | ** | |||||||
10866087-A-T | ** | ||||||||
10866089-T-C | ** | ||||||||
10866097-C-CGT | ** | ||||||||
10866099-C-CAAT | ** | ||||||||
27808430-C-A | 25662283-C-A | P1_Y2 | ** | ||||||
27808438-C-A | 25662291-C-A | P1_Y2 | ** | ||||||
13999279-C-A | 11878573-C-A | ** | |||||||
20809480-C-A | 18647594-C-A | P4_Gap | ** | ||||||
3804762-T-A | 3936721-T-A | ** | |||||||
10958481-C-A | ** | ||||||||
16018367-C-A | 13906487-C-A | ** | |||||||
13461024-C-A | 11305348-C-A | ** | |||||||
20579339-A-C | 18417453-A-C | P5_Dst | ** | ||||||
4769339-C-A | 4901298-C-A | ** | |||||||
17722497-C-A | 15610617-C-A | ** | |||||||
5562334-C-A | 5694293-C-A | ** | |||||||
13899246-C-A | 11778540-C-A | ** | |||||||
7270303-A-G | 7402262-A-G | ** | |||||||
26415672-G-C | 24269525-G-C | P1_Y1 | ** | ||||||
19042682-C-A | 16930802-C-A | ** | |||||||
19532581-C-A | 17420701-C-A | ** | |||||||
17752052-C-A | 15640172-C-A | ** | |||||||
26100545-GGTG-T | 23954398-GGTG-T | P1_Y1 | ** | ||||||
6352521-G-T | 6484480-G-T | ** | |||||||
9986005-C-A | 10148396-C-A | ** | |||||||
15971206-C-T | 13859326-C-T | ** | |||||||
10772434-T-TC | ** | ||||||||
18008645-CTTT-C | 15896765-CTTT-C | P7_Dst | 30×T | ** | |||||
26379161-C-A | 24233014-C-A | P1_Y1 | ** | ||||||
11643647-A-C | DYZ17 | ** | |||||||
12512452-T-TAC | 20×AC | ** | |||||||
17934218-G-A | 15822338-G-A | ** | |||||||
23825100-C-T | 21663214-C-T | ** | |||||||
11025431-A-G | ** | ||||||||
21141439-C-A | 18979553-C-A | ** | |||||||
10994249-G-A | ** | ||||||||
10994251-A-T | ** | ||||||||
10994254-C-A | ** | ||||||||
20791852-G-A | 18629966-G-A | BY51856 | P4_Prx | ** | |||||
10984437-C-A | ** | ||||||||
10984458-C-T | ** | ||||||||
10984472-G-T | ** | ||||||||
10866044-T-A | ** | ||||||||
10866055-T-C | ** | ||||||||
10866067-C-T | ** | ||||||||
13316152-C-A | 11160476-C-A | ** | |||||||
9440307-C-A | 9602698-C-A | ** | |||||||
10799595-C-A | ** | ||||||||
11008777-C-A | ** | ||||||||
4261804-C-A | 4393763-C-A | ** | |||||||
14366360-C-A | 12245655-C-A | ** | |||||||
23350626-CTTTT-C | 21188740-CTTTT-C | 21×T | ** | ||||||
56844182-G-T | ** | ||||||||
13468323-A-G | 11312647-A-G | ** | |||||||
14485192-G-T | 12364461-G-T | ** | |||||||
4534135-G-T | 4666094-G-T | ** | |||||||
10972368-A-C | ** | ||||||||
10964787-C-A | ** | ||||||||
13512085-G-T | 11356409-G-T | ** | |||||||
21163145-C-A | 19001259-C-A | ** | |||||||
7723948-CTTTT-C | 7855907-CTTTT-C | 25×T | ** | ||||||
3829006-C-A | 3960965-C-A | ** | |||||||
14858658-C-T | 12746724-C-T | ** | |||||||
21614759-C-A | 19452873-C-A | ** | |||||||
26376476-G-T | 24230329-G-T | P1_Y1 | ** | ||||||
14184421-T-C | 12063715-T-C | ** | |||||||
14413113-C-A | 12292410-C-A | ** | |||||||
13441614-C-A | 11285938-C-A | ** | |||||||
10834571-T-C | ** | ||||||||
10834577-T-G | ** | ||||||||
3620876-C-A | 3752835-C-A | ** | |||||||
23801730-T-A | 21639844-T-A | ** | |||||||
26079206-G-T | 23933059-G-T | P1_Y1 | ** | ||||||
9198238-C-G | 9360629-C-G | ** | |||||||
19293766-G-C | 17181886-G-C | ** | |||||||
28533750-T-G | 26387603-T-G | ** | |||||||
24884205-C-T | 22738058-C-T | g1 | ** | ||||||
6429635-C-A | 6561594-C-A | ** | |||||||
6147529-C-A | 6279488-C-A | IR3_Dst | ** | ||||||
19775351-C-T | 17663471-C-T | P5_Prx | ** | ||||||
15882072-C-T | 13770192-C-T | ** | |||||||
18166085-C-A | 16054205-C-A | ** | |||||||
14579479-C-A | 12467679-C-A | ** | |||||||
24003085-C-A | 21856938-C-A | ** | |||||||
10987976-C-G | ** | ||||||||
14253233-C-G | 12132527-C-G | ** | |||||||
56838517-C-A | ** | ||||||||
5294405-C-A | 5426364-C-A | ** | |||||||
15432940-C-A | 13321060-C-A | ** | |||||||
23808228-CT-C | 21646342-CT-C | 8×T | ** | ||||||
15410623-G-A | 13298743-G-A | ** | |||||||
14925933-G-GT | 12813998-G-GT | ** | |||||||
8672932-C-A | 8804891-C-A | ** | |||||||
15786111-C-A | 13674231-C-A | ** | |||||||
17224456-C-A | 15112576-C-A | ** | |||||||
7253767-G-T | 7385726-G-T | ** | |||||||
5368381-G-T | 5500340-G-T | ** | |||||||
15595179-T-C | 13483299-T-C | ** | |||||||
10974015-T-C | ** | ||||||||
15252788-C-A | 13140874-C-A | ** | |||||||
26544668-G-A | 24398521-G-A | P1_g2 | ** | ||||||
19479163-A-C | 17367283-A-C | ** | |||||||
14213197-T-A | 12092491-T-A | ** | |||||||
15151500-C-T | 13039587-C-T | ** | |||||||
13937337-C-A | 11816631-C-A | ** | |||||||
21134914-A-C | 18973028-A-C | ** | |||||||
7150733-C-A | 7282692-C-A | ** | |||||||
18948041-C-A | 16836161-C-A | ** | |||||||
19558304-C-A | 17446424-C-A | ** | |||||||
16284150-C-A | 14172270-C-A | ** | |||||||
56685542-A-T | ** | ||||||||
13460984-A-C | 11305308-A-C | ** | |||||||
23952408-C-A | 21806261-C-A | ** | |||||||
2981428-G-T | 3113387-G-T | ** | |||||||
10081296-C-A | 10243687-C-A | ** | |||||||
10655927-T-G | ** | ||||||||
16574789-C-A | 14462909-C-A | ** | |||||||
20815669-C-A | 18653783-C-A | P4_Gap | ** | ||||||
17426983-C-A | 15315103-C-A | ** | |||||||
14802954-C-A | 12691025-C-A | ** | |||||||
14316293-C-A | 12195587-C-A | ** | |||||||
28560908-C-A | 26414761-C-A | ** | |||||||
6816750-T-C | 6948709-T-C | ** | |||||||
13894314-C-A | 11773608-C-A | ** | |||||||
10798176-G-T | ** | ||||||||
10762628-T-C | ** | ||||||||
15928684-C-A | 13816804-C-A | ** | |||||||
7180064-C-A | 7312023-C-A | ** | |||||||
24359622-C-A | 22213475-C-A | ** | |||||||
20409584-G-T | 18247698-G-T | P5_Dst | ** | ||||||
28515389-C-A | 26369242-C-A | ** | |||||||
13253188-T-C | 11097512-T-C | ** | |||||||
10779937-G-T | ** | ||||||||
56685556-G-GAATGC | ** | ||||||||
2948880-C-A | 3080839-C-A | ** | |||||||
11010212-A-C | ** | ||||||||
17158995-G-TTT | 15047115-G-TTT | ** | |||||||
14422354-C-A | 12301629-C-A | ** | |||||||
26834599-C-G | 24688452-C-G | P1_g2 | 16×AAAG | ** | |||||
3286628-A-C | 3418587-A-C | ** | |||||||
3622393-C-A | 3754352-C-A | ** | |||||||
13846748-T-A | 11726042-T-A | DYZ17 | ** | ||||||
28559037-C-A | 26412890-C-A | ** | |||||||
27792033-A-T | 25645886-A-T | P1_Y2 | ** | ||||||
10762713-T-A | ** | ||||||||
10762725-A-G | ** | ||||||||
6891-C-A | ** | ||||||||
24729751-A-C | 22583604-A-C | P3_b2 | ** | ||||||
6911327-C-A | 7043286-C-A | ** | |||||||
2668994-G-T | 2800953-G-T | ** | |||||||
2689626-C-T | 2821585-C-T | ** | |||||||
2738813-A-T | 2870772-A-T | ** | |||||||
2752602-T-G | 2884561-T-G | ** | |||||||
2793018-G-T | 2924977-G-T | ** | |||||||
2917678-T-C | 3049637-T-C | ** | |||||||
2986435-C-A | 3118394-C-A | ** | |||||||
3105449-C-A | 3237408-C-A | ** | |||||||
3209576-G-T | 3341535-G-T | ** | |||||||
3231884-A-G | 3363843-A-G | ** | |||||||
3332008-C-A | 3463967-C-A | ** | |||||||
3346181-C-A | 3478140-C-A | ** | |||||||
3373968-T-C | 3505927-T-C | ** | |||||||
3409173-T-C | 3541132-T-C | ** | |||||||
3490911-G-A | 3622870-G-A | ** | |||||||
3492766-A-T | 3624725-A-T | ** | |||||||
3500591-T-C | 3632550-T-C | ** | |||||||
3500625-A-G | 3632584-A-G | ** | |||||||
3568634-C-A | 3700593-C-A | ** | |||||||
3599514-A-C | 3731473-A-C | ** | |||||||
3650864-G-T | 3782823-G-T | ** | |||||||
3658009-G-T | 3789968-G-T | ** | |||||||
3681346-G-T | 3813305-G-T | ** | |||||||
3723896-G-T | 3855855-G-T | ** | |||||||
3723923-G-T | 3855882-G-T | ** | |||||||
3724032-G-T | 3855991-G-T | ** | |||||||
3732029-C-A | 3863988-C-A | ** | |||||||
3804762-T-TAA | 3936721-T-TAA | ** | |||||||
3815226-T-C | 3947185-T-C | ** | |||||||
3818020-A-C | 3949979-A-C | ** | |||||||
3849065-G-A | 3981024-G-A | ** | |||||||
3850440-A-C | 3982399-A-C | ** | |||||||
3865463-A-C | 3997422-A-C | ** | |||||||
3877037-T-A | 4008996-T-A | ** | |||||||
3961064-C-A | 4093023-C-A | ** | |||||||
3966908-T-G | 4098867-T-G | ** | |||||||
3987199-T-C | 4119158-T-C | ** | |||||||
3987263-A-G | 4119222-A-G | ** | |||||||
4065917-A-T | 4197876-A-T | ** | |||||||
4077589-C-A | 4209548-C-A | ** | |||||||
4095041-T-A | 4227000-T-A | ** | |||||||
4161780-C-A | 4293739-C-A | ** | |||||||
4177932-A-G | 4309891-A-G | ** | |||||||
4208794-G-T | 4340753-G-T | ** | |||||||
4212764-A-T | 4344723-A-T | ** | |||||||
4212768-A-T | 4344727-A-T | ** | |||||||
4212771-A-T | 4344730-A-T | ** | |||||||
4240087-T-A | 4372046-T-A | ** | |||||||
4240881-T-A | 4372840-T-A | ** | |||||||
4240895-T-G | 4372854-T-G | ** | |||||||
4244682-C-A | 4376641-C-A | ** | |||||||
4248662-C-A | 4380621-C-A | ** | |||||||
4250639-C-A | 4382598-C-A | ** | |||||||
4256831-A-T | 4388790-A-T | ** | |||||||
4256840-C-A | 4388799-C-A | ** | |||||||
4416342-AT-A | 4548301-AT-A | 9×T | ** | ||||||
4433336-T-G | 4565295-T-G | ** | |||||||
4433388-C-A | 4565347-C-A | ** | |||||||
4439801-C-A | 4571760-C-A | ** | |||||||
4449258-C-A | 4581217-C-A | ** | |||||||
4450706-C-A | 4582665-C-A | ** | |||||||
4468282-C-A | 4600241-C-A | ** | |||||||
4468309-T-C | 4600268-T-C | ** | |||||||
4502913-A-C | 4634872-A-C | ** | |||||||
4521933-A-G | 4653892-A-G | ** | |||||||
4536807-C-T | 4668766-C-T | ** | |||||||
4580640-C-A | 4712599-C-A | ** | |||||||
4582529-C-T | 4714488-C-T | ** | |||||||
4604259-T-C | 4736218-T-C | ** | |||||||
4661490-C-A | 4793449-C-A | ** | |||||||
4672394-C-A | 4804353-C-A | ** | |||||||
4728234-G-C | 4860193-G-C | ** | |||||||
4770472-G-T | 4902431-G-T | ** | |||||||
4789424-C-A | 4921383-C-A | ** | |||||||
4808554-T-C | 4940513-T-C | ** | |||||||
4808677-A-G | 4940636-A-G | ** | |||||||
4811391-C-G | 4943350-C-G | ** | |||||||
4861951-T-G | 4993910-T-G | ** | |||||||
4888109-T-C | 5020068-T-C | ** | |||||||
4898068-A-T | 5030027-A-T | ** | |||||||
4920190-G-C | 5052149-G-C | ** | |||||||
4920203-A-T | 5052162-A-T | ** | |||||||
4920215-G-T | 5052174-G-T | ** | |||||||
4920228-A-C | 5052187-A-C | ** | |||||||
4925993-C-T | 5057952-C-T | ** | |||||||
4952074-T-G | 5084033-T-G | ** | |||||||
5011453-T-G | 5143412-T-G | ** | |||||||
5015458-C-A | 5147417-C-A | ** | |||||||
5021959-G-A | 5153918-G-A | ** | |||||||
5261872-C-A | 5393831-C-A | ** | |||||||
5309593-G-A | 5441552-G-A | ** | |||||||
5412353-T-C | 5544312-T-C | ** | |||||||
5458562-T-A | 5590521-T-A | ** | |||||||
5620893-T-G | 5752852-T-G | ** | |||||||
5627863-A-G | 5759822-A-G | ** | |||||||
5701018-C-A | 5832977-C-A | ** | |||||||
5712388-G-T | 5844347-G-T | ** | |||||||
5755920-G-T | 5887879-G-T | ** | |||||||
5819131-C-A | 5951090-C-A | ** | |||||||
5819331-C-A | 5951290-C-A | ** | |||||||
5829713-T-C | 5961672-T-C | ** | |||||||
5852473-T-G | 5984432-T-G | ** | |||||||
5927687-A-T | 6059646-A-T | ** | |||||||
5935373-C-A | 6067332-C-A | ** | |||||||
5949602-A-T | 6081561-A-T | ** | |||||||
5969815-C-A | 6101774-C-A | ** | |||||||
6086304-A-G | 6218263-A-G | ** | |||||||
6177457-TA-T | 6309416-TA-T | IR3_Dst | ** | ||||||
6384654-C-A | 6516613-C-A | ** | |||||||
6424830-C-A | 6556789-C-A | ** | |||||||
6431929-T-G | 6563888-T-G | ** | |||||||
6465454-T-C | 6597413-T-C | ** | |||||||
6514185-G-T | 6646144-G-T | ** | |||||||
6520694-G-T | 6652653-G-T | ** | |||||||
6606000-C-A | 6737959-C-A | ** | |||||||
6611362-T-A | 6743321-T-A | ** | |||||||
6630576-C-A | 6762535-C-A | ** | |||||||
6637175-C-A | 6769134-C-A | ** | |||||||
6640263-T-C | 6772222-T-C | ** | |||||||
6664074-G-T | 6796033-G-T | ** | |||||||
6691065-A-C | 6823024-A-C | ** | |||||||
6691112-C-A | 6823071-C-A | ** | |||||||
6730316-T-C | 6862275-T-C | ** | |||||||
6807319-C-T | 6939278-C-T | ** | |||||||
6816732-AG-T | 6948691-AG-T | ** | |||||||
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21371659-G-A | 19209773-G-A | ** | |||||||
21387149-T-C | 19225263-T-C | ** | |||||||
21447914-T-C | 19286028-T-C | ** | |||||||
21515860-CTC-A | 19353974-CTC-A | ** | |||||||
21555377-A-G | 19393491-A-G | ** | |||||||
21589602-T-A | 19427716-T-A | ** | |||||||
21616011-C-A | 19454125-C-A | ** | |||||||
21681721-G-A | 19519835-G-A | ** | |||||||
21700465-G-A | 19538579-G-A | ** | |||||||
21714768-A-T | 19552882-A-T | ** | |||||||
21738738-C-A | 19576852-C-A | ** | |||||||
21775227-C-A | 19613341-C-A | ** | |||||||
21912102-A-G | 19750216-A-G | ** | |||||||
21935138-T-A | 19773252-T-A | FTB12920 | ** | ||||||
21974830-T-A | 19812944-T-A | ** | |||||||
21984065-C-A | 19822179-C-A | ** | |||||||
22010436-C-A | 19848550-C-A | ** | |||||||
22060362-C-A | 19898476-C-A | ** | |||||||
22060414-C-A | 19898528-C-A | ** | |||||||
22068577-C-A | 19906691-C-A | ** | |||||||
22077331-G-T | 19915445-G-T | ** | |||||||
22097279-T-A | 19935393-T-A | ** | |||||||
22100884-G-A | 19938998-G-A | ** | |||||||
22166661-C-A | 20004775-C-A | ** | |||||||
22520538-C-A | 20358652-C-A | ** | |||||||
22588033-A-C | 20426147-A-C | ** | |||||||
22658266-G-T | 20496380-G-T | ** | |||||||
22658270-T-A | 20496384-T-A | ** | |||||||
22800743-G-T | 20638857-G-T | ** | |||||||
22882096-A-T | 20720210-A-T | ** | |||||||
22903746-A-C | 20741860-A-C | ** | |||||||
22997514-A-T | 20835628-A-T | FTA51251 | ** | ||||||
23009994-G-T | 20848108-G-T | ** | |||||||
23055282-A-C | 20893396-A-C | ** | |||||||
23059610-T-A | 20897724-T-A | ** | |||||||
23061145-C-A | 20899259-C-A | ** | |||||||
23096981-G-A | 20935095-G-A | ** | |||||||
23145303-C-A | 20983417-C-A | ** | |||||||
23185883-G-T | 21023997-G-T | ** | |||||||
23252723-C-A | 21090837-C-A | ** | |||||||
23261249-T-G | 21099363-T-G | ** | |||||||
23434340-T-A | 21272454-T-A | ** | |||||||
23442734-TA-T | 21280848-TA-T | ** | |||||||
23623268-C-A | 21461382-C-A | ** | |||||||
23818531-C-A | 21656645-C-A | ** | |||||||
23825086-T-A | 21663200-T-A | ** | |||||||
23825087-TTTGAG-T | 21663201-TTTGAG-T | ** | |||||||
23848670-G-A | 21686784-G-A | ** | |||||||
23848705-G-A | 21686819-G-A | ** | |||||||
24385107-T-C | 22238960-T-C | ** | |||||||
24405281-T-G | 22259134-T-G | ** | |||||||
24415763-TA-T | 22269616-TA-T | ** | |||||||
24450481-G-T | 22304334-G-T | ** | |||||||
24458784-G-C | 22312637-G-C | ** | |||||||
24509255-C-G | 22363108-C-G | ** | |||||||
24582354-T-TC | 22436207-T-TC | P3_t2 | ** | ||||||
24671220-C-T | 22525073-C-T | P3_b2 | ** | ||||||
26054127-A-G | 23907980-A-G | P1_Y1 | ** | ||||||
26054136-A-AG | 23907989-A-AG | P1_Y1 | ** | ||||||
26054139-C-A | 23907992-C-A | P1_Y1 | ** | ||||||
26064983-A-C | 23918836-A-C | P1_Y1 | ** | ||||||
26078773-G-T | 23932626-G-T | P1_Y1 | ** | ||||||
26248867-G-T | 24102720-G-T | P1_Y1 | ** | ||||||
27676254-C-A | 25530107-C-A | P1_Y2 | ** | ||||||
27971825-T-G | 25825678-T-G | P1_Y2 | ** | ||||||
28062677-C-G | 25916530-C-G | P1_Y2 | ** | ||||||
28469446-G-T | 26323299-G-T | ** | |||||||
28484477-C-A | 26338330-C-A | ** | |||||||
28486044-G-A | 26339897-G-A | ** | |||||||
28533749-G-A | 26387602-G-A | ** | |||||||
28583115-A-G | 26436968-A-G | ** | |||||||
28633527-C-A | 26487380-C-A | ** | |||||||
28644445-C-A | 26498298-C-A | ** | |||||||
28658360-C-A | 26512213-C-A | ** | |||||||
28658540-GT-G | 26512393-GT-G | 8×T | ** | ||||||
28699898-T-C | 26553751-T-C | ** | |||||||
28707489-G-T | 26561342-G-T | ** | |||||||
28711973-C-A | 26565826-C-A | ** | |||||||
28712058-T-C | 26565911-T-C | ** | |||||||
28719936-C-A | 26573789-C-A | ** | |||||||
28727683-C-A | 26581536-C-A | ** | |||||||
28730034-T-A | 26583887-T-A | ** | |||||||
28731493-C-A | 26585346-C-A | ** | |||||||
28742567-G-T | 26596420-G-T | ** | |||||||
28754987-A-T | 26608840-A-T | ** | |||||||
28774479-A-T | 26628332-A-T | ** | |||||||
28808577-C-A | 26662430-C-A | ** | |||||||
28812337-A-G | 26666190-A-G | ** | |||||||
56825780-G-A | ** | ||||||||
56840013-C-A | ** | ||||||||
56847235-A-T | ** | ||||||||
56847817-C-A | ** | ||||||||
56850550-G-T | ** | ||||||||
58974763-T-C | 56828616-T-C | *** | |||||||
58974713-T-A | 56828566-T-A | *** | |||||||
22456875-T-G | 20294989-T-G | DYZ19 | *** | ||||||
4049389-C-A | 4181348-C-A | *** | |||||||
6807698-G-T | 6939657-G-T | *** | |||||||
14319589-ATG-A | 12198883-ATG-A | *** | |||||||
15057757-G-T | 12945849-G-T | *** | |||||||
58982078-C-T | 56835931-C-T | *** | |||||||
23608749-A-AT | 21446863-A-AT | 10×T | *** | ||||||
24105911-T-C | 21959764-T-C | P3_b1 | *** | ||||||
10690740-C-G | *** | ||||||||
21555237-TC-T | 19393351-TC-T | *** | |||||||
10935561-C-G | *** | ||||||||
17361058-C-A | 15249178-C-A | 25×A | *** | ||||||
10895827-A-G | *** | ||||||||
11012308-C-A | *** | ||||||||
15477273-C-A | 13365393-C-A | *** | |||||||
19183865-G-T | 17071985-G-T | *** | |||||||
21086136-TAAA-T | 18924250-TAAA-T | 24×A | *** | ||||||
13488795-G-A,T | 11333119-G-A,T | *** | |||||||
6878095-C-A | 7010054-C-A | *** | |||||||
2844149-G-T | 2976108-G-T | 16×T | *** | ||||||
3272888-C-A | 3404847-C-A | *** | |||||||
16416819-C-A | 14304939-C-A | *** | |||||||
56835924-C-G | *** | ||||||||
13990112-C-A | 11869406-C-A | *** | |||||||
6120222-C-A | 6252181-C-A | *** | |||||||
9798063-GTT-G,GTTT | 9960454-GTT-G,GTTT | 17×T | *** | ||||||
8666748-TG-T | 8798707-TG-T | *** | |||||||
13478261-GGCA-G | 11322585-GGCA-G | *** | |||||||
13976083-CAAAA-C | 11855377-CAAAA-C | 15×A | *** | ||||||
14061351-C-T | 11940645-C-T | *** | |||||||
13294577-G-T | 11138901-G-T | *** | |||||||
15507827-G-T | 13395947-G-T | *** | |||||||
17361057-T-A | 15249177-T-A | *** | |||||||
10671075-C-A | *** | ||||||||
14285942-C-A | 12165236-C-A | A18285 | *** | ||||||
23831277-TTG-T | 21669391-TTG-T | *** | |||||||
3012715-C-A | 3144674-C-A | *** | |||||||
8736275-A-T | 8868234-A-T | *** | |||||||
21974958-C-A | 19813072-C-A | *** | |||||||
10691344-CTCCATTCCAT-C | *** | ||||||||
2665161-G-A | 2797120-G-A | *** | |||||||
2762681-C-T | 2894640-C-T | M12001 | *** | ||||||
3047688-G-A | 3179647-G-A | *** | |||||||
3640874-T-C | 3772833-T-C | *** | |||||||
4063977-C-A | 4195936-C-A | *** | |||||||
6037574-T-C | 6169533-T-C | *** | |||||||
6347496-G-T | 6479455-G-T | *** | |||||||
6490887-C-A | 6622846-C-A | *** | |||||||
6663209-T-C | 6795168-T-C | *** | |||||||
6694064-C-A | 6826023-C-A | *** | |||||||
7939205-C-A | 8071164-C-A | *** | |||||||
8172781-A-T | 8304740-A-T | *** | |||||||
8967748-T-C | 9130139-T-C | *** | |||||||
8970135-C-A | 9132526-C-A | *** | |||||||
9980705-C-A | 10143096-C-A | *** | |||||||
10694005-CCACTCCACT-C | *** | ||||||||
10949928-T-C | *** | ||||||||
10987056-T-A | *** | ||||||||
10987069-G-A | *** | ||||||||
10987074-C-G | *** | ||||||||
11012315-T-A | *** | ||||||||
11019489-T-A | *** | ||||||||
11033938-C-T | *** | ||||||||
11033954-T-C | *** | ||||||||
13466208-A-G | 11310532-A-G | *** | |||||||
14488292-G-T | 12367561-G-T | *** | |||||||
14622032-T-G | 12510230-T-G | *** | |||||||
14938487-C-A | 12826562-C-A | *** | |||||||
15495481-T-C | 13383601-T-C | *** | |||||||
15507823-C-T | 13395943-C-T | M12044 | *** | ||||||
16274427-A-T | 14162547-A-T | *** | |||||||
16427408-A-G | 14315528-A-G | *** | |||||||
16889730-C-A | 14777850-C-A | F21172 | *** | ||||||
18218913-C-A | 16107033-C-A | *** | |||||||
22849711-C-A | 20687825-C-A | *** | |||||||
23633412-T-C | 21471526-T-C | BY173638 | *** | ||||||
23803039-C-A | 21641153-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.