Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > FGC4077 > FGC12948 > FGC12950 > A2182

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
S4C39
14436676-C-T 12315949-C-T FGC12944 Y+
23274603-T-A 21112717-T-A FGC12949 YY+
4463002-C-T 4594961-C-T FGC12936 +
8193510-G-C 8325469-G-C FGC12938 YY+
9156869-G-A 9319260-G-A FGC12940 +
17734836-A-G 15622956-A-G FGC12945 Y+
8185668-CT-C 8317627-CT-C FGC12951 +
13652878-C-A 11497202-C-A FGC12943 +
21655482-T-C 19493596-T-C FGC12947 YY+
18969348-T-G 16857468-T-G FGC12946 Y+
13313721-C-G 11158045-C-G FGC12942 +
5767662-G-T 5899621-G-T FGC12937 *
13241794-G-A 11086118-G-A FGC12941 *
8214408-G-A 8346367-G-A FGC12939 YY*
22789552-G-T 20627666-G-T **
22516115-G-A 20354229-G-A FGC60032 **
15924414-G-T 13812534-G-T **
15671815-G-A 13559935-G-A **
4395387-T-C 4527346-T-C **
13469318-G-C 11313642-G-C **
58893222-GTCCATTCCGTTCGAT-G 56697615-GGGAATCGAACGGAAT-G **
9075188-CTTTTTTT-C 9237579-CTTTTTTT-C 20×T**
7671307-TACAC-T 7803266-TACAC-T 17×AC**
14410374-A-G 12289671-A-G **
14343140-T-A 12222435-T-A **
13473447-C-A 11317771-C-A **
4474309-G-T 4606268-G-T **
13383436-A-C 11227760-A-C **
24387102-A-C 22240955-A-C **
24387101-T-C 22240954-T-C **
58862644-C-G 56728227-G-C **
13492247-A-T 11336571-A-T **
13492264-C-A 11336588-C-A **
13517368-GACT-G 11361692-GACT-G **
13329179-G-T 11173503-G-T **
19029607-A-T 16917727-A-T **
17928143-T-A 15816263-T-A **
7632434-T-C 7764393-T-C **
13251630-T-C 11095954-T-C **
7968397-G-A 8100356-G-A **
7577693-T-C 7709652-T-C **
7340204-A-T 7472163-A-T **
20354926-T-C 18193040-T-C P5_Dst **
8135898-G-A 8267857-G-A **
5303394-G-T 5435353-G-T FGC60031 **
5186392-G-A 5318351-G-A **
27370023-T-C 25223876-T-C P1_g3 ***
27581650-C-T 25435503-C-T P1_Y2 ***
58841385-T-C 56749486-A-G ***
58832602-C-T 56758269-G-A ***
28082482-A-G 25936335-A-G P1_Y2 ***
28082481-A-G 25936334-A-G P1_Y2 ***
28082479-A-G 25936332-A-G P1_Y2 ***
27981718-C-A 25835571-C-A P1_Y2 ***
58832604-A-T 56758267-T-A ***
27702244-A-G 25556097-A-G P1_Y2 ***
27637566-C-G 25491419-C-G P1_Y2 ***
27581651-C-T 25435504-C-T P1_Y2 ***
58832605-T-G 56758266-A-C ***
58833124-A-G 56757747-T-C ***
58841334-T-C 56749537-A-G ***
58833134-G-A 56757737-C-T ***
27578917-G-A 25432770-G-A P1_Y2 ***
58832575-T-A 56758296-A-T ***
58833136-G-T 56757735-C-A ***
27476544-C-G 25330397-C-G P1_Y2 ***
27369980-C-T 25223833-C-T P1_g3 ***
27476543-A-G 25330396-A-G P1_Y2 ***
27476524-T-A 25330377-T-A P1_Y2 ***
27409185-G-T 25263038-G-T P1_g3 ***
58833148-G-A 56757723-C-T ***
58833149-A-G 56757722-T-C ***
27409182-C-T 25263035-C-T P1_g3 ***
27409181-A-T 25263034-A-T P1_g3 ***
27578910-G-A 25432763-G-A P1_Y2 ***
58823533-T-C 56767338-A-G ***
58832569-A-G 56758302-T-C ***
58832554-T-A 56758317-A-T ***
58824622-T-A 56766249-A-T ***
58826823-A-T 56764048-T-A ***
58826829-C-T 56764042-G-A ***
58826831-A-T 56764040-T-A ***
58823033-T-A 56767838-A-T ***
58823031-C-A 56767840-G-T ***
58823026-C-G 56767845-G-C ***
58823024-C-T 56767847-G-A ***
58823022-C-T 56767849-G-A ***
58829066-T-G 56761805-A-C ***
58823018-A-G 56767853-T-C ***
58823014-T-G 56767857-A-C ***
58820585-G-C 56770286-C-G ***
28082507-T-A 25936360-T-A P1_Y2 ***
58820475-T-A 56770396-A-T ***
58820472-C-T 56770399-G-A ***
58819791-T-G 56771080-A-C ***
28751349-C-A 26605202-C-A ***
28751348-G-C 26605201-G-C ***
28583163-T-C 26437016-T-C ***
28478008-A-T 26331861-A-T 15×AT***
58832557-T-C 56758314-A-G ***
28213287-A-G 26067140-A-G P1_b4 ***
28082509-T-A 25936362-T-A P1_Y2 ***
58832563-C-T 56758308-G-A ***
28082508-G-A 25936361-G-A P1_Y2 ***
58823035-C-T 56767836-G-A ***
13726203-C-G 11570527-C-G ***
27235508-T-A 25089361-T-A P1_g3 ***
27369979-A-C 25223832-A-C P1_g3 ***
22495822-G-A 20333936-G-A DYZ19 ***
22369637-G-T 20207751-G-T DYZ19 ***
22421924-A-G 20260038-A-G DYZ19 ***
22424201-A-T 20262315-A-T DYZ19 ***
22424207-G-T 20262321-G-T DYZ19 ***
22450500-G-C 20288614-G-C DYZ19 ***
22450507-T-G 20288621-T-G DYZ19 ***
22491790-C-T 20329904-C-T DYZ19 ***
22495786-C-G 20333900-C-G DYZ19 ***
22496072-G-A 20334186-G-A DYZ19 ***
22366813-C-T 20204927-C-T DYZ19 ***
22499753-C-T 20337867-C-T DYZ19 ***
22499816-A-T 20337930-A-T DYZ19 ***
22499817-C-T 20337931-C-T DYZ19 ***
22499843-A-G 20337957-A-G DYZ19 ***
22503330-A-G 20341444-A-G DYZ19 ***
22504674-G-C 20342788-G-C DYZ19 ***
22984360-T-A 20822474-T-A ***
22988241-A-G 20826355-A-G ***
22367094-A-T 20205208-A-T DYZ19 ***
22365801-T-G 20203915-T-G DYZ19 ***
23228052-A-T 21066166-A-T ***
22337305-G-T 20175419-G-T DYZ19 ***
22276110-A-G 20114224-A-G DYZ19 ***
22282156-T-C 20120270-T-C DYZ19 ***
22289787-T-G 20127901-T-G DYZ19 ***
22308389-T-A 20146503-T-A DYZ19 ***
22308397-G-T 20146511-G-T DYZ19 ***
22308469-G-C 20146583-G-C DYZ19 ***
22322618-G-A 20160732-G-A DYZ19 ***
22330004-A-G 20168118-A-G DYZ19 ***
22337327-G-T 20175441-G-T DYZ19 ***
22365604-T-C 20203718-T-C DYZ19 ***
22341243-A-T 20179357-A-T DYZ19 ***
22342899-A-G 20181013-A-G DYZ19 ***
22344146-A-C 20182260-A-C DYZ19 ***
22344147-T-C 20182261-T-C DYZ19 ***
22344149-G-A 20182263-G-A YFS041871 DYZ19 ***
22360537-T-A 20198651-T-A DYZ19 ***
22361069-C-A 20199183-C-A DYZ19 ***
22364607-C-A 20202721-C-A DYZ19 ***
23205789-G-T 21043903-G-T ***
23228053-A-T 21066167-A-T ***
27369962-T-G 25223815-T-G P1_g3 ***
26923397-G-A 24777250-G-A P1_r3 ***
26093749-C-T 23947602-C-T P1_Y1 ***
26139671-C-A 23993524-C-A P1_Y1 ***
26260530-A-C 24114383-A-C P1_Y1 ***
26260540-T-G 24114393-T-G P1_Y1 ***
26260543-G-A 24114396-G-A P1_Y1 ***
26446524-T-A 24300377-T-A P1_Y1 ***
26446540-A-G 24300393-A-G P1_Y1 ***
26446798-C-T 24300651-C-T P1_Y1 ***
27054251-C-T 24908104-C-T FGC60033 P1_r4 ***
26093735-G-A 23947588-G-A P1_Y1 ***
27235485-C-A 25089338-C-A P1_g3 ***
27235505-C-A 25089358-C-A P1_g3 ***
58843660-C-A 56747211-G-T ***
27235513-C-A 25089366-C-A P1_g3 ***
27235514-T-G 25089367-T-G P1_g3 ***
27235515-T-A 25089368-T-A P1_g3 ***
27265904-G-C 25119757-G-C P1_g3 ***
27274787-T-G 25128640-T-G P1_g3 ***
26093736-G-T 23947589-G-T P1_Y1 ***
26093723-T-C 23947576-T-C P1_Y1 ***
23516621-G-A 21354735-G-A ***
24583101-C-T 22436954-C-T P3_t2 ***
23518625-T-C 21356739-T-C ***
24147777-T-C 22001630-T-C P3_b1 ***
24260569-C-A 22114422-C-A P3_b1 ***
24260604-T-A 22114457-T-A P3_b1 ***
24260617-T-A 22114470-T-A P3_b1 ***
24260620-A-G 22114473-A-G P3_b1 ***
24583079-C-A 22436932-C-A P3_t2 ***
24583080-C-A 22436933-C-A P3_t2 ***
24862279-T-A 22716132-T-A P3_b2 ***
26085236-C-T 23939089-C-T P1_Y1 ***
25268540-G-A 23122393-G-A P2_r1 ***
25505504-G-T 23359357-G-T P1_gr1 ***
25505516-C-T 23359369-C-T P1_gr1 ***
25593693-A-T 23447546-A-T P1_gr1 ***
26039437-C-G 23893290-C-G P1_Y1 ***
26039451-T-A 23893304-T-A P1_Y1 ***
26039457-T-A 23893310-T-A P1_Y1 ***
26039466-C-T 23893319-C-T P1_Y1 ***
58841404-C-T 56749467-G-A ***
58847762-T-C 56743109-A-G ***
58843764-A-G 56747107-T-C ***
13478509-TT-GG 11322833-TT-GG ***
13254160-CTTT-TTTC 11098484-CTTT-TTTC ***
13374677-CAAAA-AAAAT 11219001-CAAAA-AAAAT ***
13424285-CCCAT-TCCAC 11268609-CCCAT-TCCAC ***
13467725-AA-CT 11312049-AA-CT ***
13471978-GACC-CACT 11316302-GACC-CACT ***
13476136-CAAGC-TAAGA 11320460-CAAGC-TAAGA ***
13476502-GGTTG-TGTTT 11320826-GGTTG-TGTTT ***
13487284-CACT-GACC 11331608-CACT-GACC ***
13138885-GTATTCCATT-ACATTATATC 10628371-GTATTCCATT-ACATTATATC ***
13606877-C-CAAAAAA 11451201-C-CAAAAAA 25×A***
13701778-TGA-GGC 11546102-TGA-GGC ***
13723586-GGCAAG-TTAAAC 11567910-GGCAAG-TTAAAC ***
13723596-GG-AT 11567920-GG-AT ***
13740758-GAAGGAAATCA-G 11585082-GAAGGAAATCA-G ***
13811104-GAATGGAATGGAATGGAATGC-G 11690398-GAATGGAATGGAATGGAATGC-G ***
13838485-AGGAAT-A 11717779-AGGAAT-A 9×GGAAT***
15263355-G-GTTAAAT 13151440-GTAAATT-TTAAATG ***
13250598-GT-TC 11094922-GT-TC ***
10019063-GGGTA-TGGTG 10181454-GGGTA-TGGTG ***
17298771-G-GA 15186891-G-GA 9×A***
5308801-GAGAGAG-TATATAT 5440760-GAGAGAG-TATATAT ***
2840099-C-CAA 2972058-C-CAA 20×A***
3358526-ACCAT-CCCA 3490485-ACCAT-CCCA ***
3474540-AACCA-CAACC 3606499-AACCA-CAACC ***
3561527-CT-TA 3693486-CT-TA ***
3902502-TAAAAATATAATACATTCAAATAGAA-T 4034461-TAAAAATATAATACATTCAAATAGAA-T ***
4562018-G-GA 4693977-G-GA 10×A***
5107036-ACCAT-CCCAC 5238995-ACCAT-CCCAC ***
5227086-GC-AA 5359045-GC-AA ***
5365351-GTTTCC-CGATCT 5497310-GTTTCC-CGATCT ***
10004740-CA-C 10167131-CA-C ***
5557238-C-CA 5689197-C-CA 23×A***
7076642-TAC-AAA 7208601-TAC-AAA ***
7125199-C-CAA 7257158-C-CAA 16×A***
8065144-CCA-TCT 8197103-CCA-TCT ***
9301402-TA-AG 9463793-TA-AG ***
9303733-GAGGACG-CCGATCT 9466124-GAGGACG-CCGATCT ***
9936877-CACAAA-TGCAAT 10099268-CACAAA-TGCAAT ***
9952729-ATAGCCAGTT-TTTGCCAGGC 10115120-ATAGCCAGTT-TTTGCCAGGC ***
15947951-CTTTTTT-C 13836071-CTTTTTT-C 19×T***
18230849-TT-GG 16118969-TT-GG ***
4031513-C-CA 4163472-C-CA 16×A***
58870596-CACCCA-GATCTC 56720270-TGGGTG-GAGATC ***
58843776-GTA-TTT 56747093-TAC-AAA ***
58847034-TCACTCTAG-CCATTGCAT 56743829-CTAGAGTGA-ATGCAATGG ***
58847060-AATT-GATG 56743808-AATT-CATC ***
58847072-CTCT-TTCC 56743796-AGAG-GGAA ***
58847087-TTCA-AATC 56743781-TGAA-GATT ***
58847190-CATTCG-GATGCC 56743676-CGAATG-GGCATC ***
58848553-GTCATT-G 56742312-GAATGA-G ***
58870710-CATTC-AATTT 56720157-GAATG-AAATT ***
58832554-TTTT-ATTC 56758314-AAAA-GAAT ***
58870720-GATTGCA-CC 56720145-TGCAATC-GG ***
58889797-GTTTGATG-ATTAGATT 56701067-CATCAAAC-AATCTAAT ***
58898203-GCAC-CGAA 56692665-GTGC-TTCG ***
58907248-TTTATCA-CCGATCT 56683617-TGATAAA-AGATCGG ***
58908611-ATTCAAT-CTTACAC 56682254-ATTGAAT-GTGTAAG ***
58917661-NN-N ***
58995228-TAA-CAG 56849081-TAA-CAG ***
58917656-CN-C ***
58832563-CATTTCATTCGATTCC-TATTCCGTTCCAATCA 56758293-GGAATCGAATGAAATG-TGATTGGAACGGAATA ***
58823348-ATTCA-GATC 56767519-TGAAT-GATC ***
19052414-C-CA 16940534-C-CA 24×A***
22343913-TT-AC 20182027-TT-AC DYZ19 ***
20326007-C-CTTTCTTTT 18164121-C-CTTTCTTTT P5_Dst 29×T***
21913467-TTGACA-CGATCT 19751581-TTGACA-CGATCT ***
21994005-GCA-G 19832119-GCA-G ***
22236553-ACTCTAGAC-TCACTGGAT 20074667-ACTCTAGAC-TCACTGGAT DYZ19 ***
22252915-TGGT-ATGA 20091029-TGGT-ATGA DYZ19 ***
22256980-ACTTA-TCTTG 20095094-ACTTA-TCTTG DYZ19 ***
22337261-TCTT-ACTA 20175375-TCTT-ACTA DYZ19 ***
22337345-GT-CA 20175459-GT-CA DYZ19 ***
22366801-TTTCGTGG-GTTAATGC 20204915-TTTCGTGG-GTTAATGC DYZ19 ***
58823062-AATTC-GATTA 56767805-GAATT-TAATC ***
24387101-TA-CC 22240954-TA-CC ***
25709386-G-GTTTCTT 23563239-G-GTTTCTT P1_b3 31×T***
26260540-TGCG-GGCA 24114393-TGCG-GGCA P1_Y1 ***
28549327-GC-G 26403180-GC-G ***
28549330-AAAGGGAGGGCAGGGCC-A 26403183-AAAGGGAGGGCAGGGCC-A ***
28818194-G-GTGGAATGGAATGTAA 26672047-G-GTGGAATGGAATGTAA 5×TGGAA***
58820649-TCA-CCG 56770220-TGA-CGG ***
58823046-CAATTCCA-GGATTACT 56767818-TGGAATTG-AGTAATCC ***
4964910-A-AT 5096869-A-AT 15×T***
5252833-AT-A 5384792-AT-A 16×T***
58843767-T-G 56747104-A-C ***
58875185-C-T 56715686-G-A ***
58857792-T-C 56733079-A-G ***
58863512-T-G 56727359-A-C ***
58870538-C-G 56720333-G-C ***
58870790-G-C 56720081-C-G ***
58872197-A-T 56718674-T-A ***
58872202-A-G 56718669-T-C ***
58872285-C-A 56718586-G-T ***
58876405-A-C 56714466-T-G ***
58857773-A-T 56733098-T-A ***
58876422-A-T 56714449-T-A ***
58876425-C-A 56714446-G-T ***
58876441-C-A 56714430-G-T ***
58877064-A-C 56713807-T-G ***
58879380-T-A 56711491-A-T ***
58879621-G-T 56711250-C-A ***
58879639-C-A 56711232-G-T ***
58879656-T-A 56711215-A-T ***
58857776-C-A 56733095-G-T ***
58857771-C-T 56733100-G-A ***
58889797-G-A 56701074-C-T ***
58847094-C-G 56743777-G-C ***
58843782-T-C 56747089-A-G ***
58843783-T-A 56747088-A-T ***
58843787-T-A 56747084-A-T ***
58845140-T-G 56745731-A-C ***
58846261-A-T 56744610-T-A ***
58846333-C-T 56744538-G-A ***
58846339-A-C 56744532-T-G ***
58847083-T-G 56743788-A-C ***
58847101-A-T 56743770-T-A ***
58857762-C-G 56733109-G-C ***
22252927-C-T 20091041-C-T DYZ19 ***
58851772-T-G 56739099-A-C ***
58851813-G-A 56739058-C-T ***
58854179-G-A 56736692-C-T ***
58856200-C-T 56734671-G-A ***
58857168-A-T 56733703-T-A ***
58857180-A-T 56733691-T-A ***
58857538-C-A 56733333-G-T ***
58880162-G-T 56710709-C-A ***
58889804-G-T 56701067-C-A ***
13466543-CC-GG 11310867-CC-GG ***
18818389-GA-G 16706509-GA-G 17×A***
58915915-A-C 56674956-T-G ***
58915916-A-C 56674955-T-G ***
5502254-CA-C 5634213-CA-C 16×A***
13292229-TCC-T 11136553-TCC-T 9×C***
3587292-C-CTTT 3719251-C-CTTT 22×T***
19202953-AG-A 17091073-AG-A ***
58844027-T-TC 56746843-A-AG ***
59030173-GT-G 56884026-GT-G ***
58912433-C-T 56678438-G-A ***
25200855-G-GAC 23054708-G-GAC g1 ***
13467767-CACCCA-TAACCT 11312091-CACCCA-TAACCT ***
13460921-TACA-CACT 11305245-TACA-CACT ***
13467717-CTA-TTG 11312041-CTA-TTG ***
4998922-C-CA 5130881-C-CA 12×A***
27997643-G-GA 25851496-G-GA P1_Y2 16×A***
7200820-A-AT 7332779-A-AT 15×T***
21202094-CT-C 19040208-CT-C 15×T***
58913120-T-G 56677751-A-C ***
58912427-C-T 56678444-G-A ***
58889812-A-G 56701059-T-C ***
58890457-A-T 56700414-T-A ***
58889826-A-C 56701045-T-G ***
58889827-A-T 56701044-T-A ***
58889833-G-A 56701038-C-T ***
58889834-A-T 56701037-T-A ***
58889922-G-A 56700949-C-T ***
58889931-A-G 56700940-T-C ***
58890447-A-T 56700424-T-A ***
58890453-T-G 56700418-A-C ***
58890465-G-T 56700406-C-A ***
58912413-C-A 56678458-G-T ***
58890620-C-T 56700251-G-A ***
58890647-C-A 56700224-G-T ***
58890649-T-A 56700222-A-T ***
58898168-C-T 56692703-G-A ***
58898184-C-T 56692687-G-A ***
58907248-T-C 56683623-A-G ***
58907249-T-C 56683622-A-G ***
58909851-A-C 56681020-T-G ***
22256876-A-T 20094990-A-T DYZ19 ***
20591286-G-C 18429400-G-C P5_Dst ***
22252907-C-G 20091021-C-G DYZ19 ***
22343981-T-C 20182095-T-C DYZ19 ***
13481508-T-A 11325832-T-A ***
58917665-N-A 56673206-N-T ***
58917663-N-G 56673208-N-C ***
13601077-T-C 11445401-T-C ***
13517436-C-A 11361760-C-A ***
22337346-T-A 20175460-T-A DYZ19 ***
22234445-A-G 20072559-A-G DYZ19 ***
22365599-G-T 20203713-G-T DYZ19 ***
13467784-A-G 11312108-A-G ***
26499946-G-T 24353799-G-T P1_Y1 ***
22234424-CTCT-GTCA 20072538-CTCT-GTCA DYZ19 ***
13253741-G-T 11098065-G-T ***
10026158-C-T 10188549-C-T ***
26180188-T-C 24034041-T-C P1_Y1 ***
5841289-G-A 5973248-G-A ***
21482757-C-T 19320871-C-T ***
22341175-C-A 20179289-C-A DYZ19 ***
13473607-G-A 11317931-G-A ***
13618653-G-A 11462977-G-A ***
25505519-G-T 23359372-G-T P1_gr1 ***
24895672-T-A 22749525-T-A g1 ***
58840421-G-C 56750450-C-G ***
58912478-C-G 56678393-G-C ***
3628709-G-GA 3760668-G-GA 26×A***
22341180-GC-CT 20179294-GC-CT DYZ19 ***
13473880-AGGAT-TGGAC 11318204-AGGAT-TGGAC ***
22234374-C-T 20072488-C-T DYZ19 ***
25505521-A-T 23359374-A-T P1_gr1 ***
28583137-G-A 26436990-G-A ***
25505522-A-T 23359375-A-T P1_gr1 ***
25505528-G-T 23359381-G-T P1_gr1 ***
58840380-G-C 56750491-C-G ***
58870180-TG-AT 56720690-CA-AT ***
5378192-C-CA 5510151-C-CA 21×A***
9951786-G-C 10114177-G-C ***
13256715-G-A 11101039-G-A ***
58864089-T-A 56726782-A-T ***
13245000-A-G 11089324-A-G ***
13346809-C-T 11191133-C-T ***
22337286-G-C 20175400-G-C DYZ19 ***
5704071-C-A 5836030-C-A ***
4071051-T-G 4203010-T-G ***
4228689-G-T 4360648-G-T ***
4359374-A-G 4491333-A-G ***
4732060-A-G 4864019-A-G ***
4843052-A-G 4975011-A-G ***
5116330-G-T 5248289-G-T ***
5378576-G-T 5510535-G-T ***
5766067-C-G 5898026-C-G ***
3313749-A-G 3445708-A-G ***
5837257-T-A 5969216-T-A ***
6194832-A-G 6326791-A-G IR3_Dst ***
6298483-A-T 6430442-A-T IR3_Dst ***
6346100-A-G 6478059-A-G ***
7044870-A-G 7176829-A-G ***
7343477-C-A 7475436-C-A ***
9303739-G-T 9466130-G-T ***
3902497-A-T 4034456-A-T ***
3167207-C-A 3299166-C-A ***
5308805-G-T 5440764-G-T ***
9930372-C-T 10092763-C-T ***
27636947-C-T 25490800-C-T P1_Y2 ***
9930303-T-C 10092694-T-C ***
18067460-A-G 15955580-A-G BY12411 ***
27636916-G-A 25490769-G-A P1_Y2 ***
58990017-A-T 56843870-A-T ***
3459526-A-G 3591485-A-G ***
3612219-A-C 3744178-A-C ***
3902604-A-G 4034563-A-G ***
3087288-C-T 3219247-C-T ***
58870594-G-T 56720277-C-A ***
5506028-C-T 5637987-C-T ***
58847514-C-G 56743357-G-C ***
13468540-G-C 11312864-G-C ***
13467726-A-T 11312050-A-T ***
13483817-G-A 11328141-G-A ***
13484462-G-T 11328786-G-T ***
13540842-G-A 11385166-G-A ***
22365813-C-G 20203927-C-G DYZ19 ***
22337250-C-T 20175364-C-T DYZ19 ***
9428436-G-T 9590827-G-T ***
22366697-T-C 20204811-T-C DYZ19 ***
13484485-G-C 11328809-G-C ***
13484461-T-A 11328785-T-A ***
13484476-G-A 11328800-G-A ***
22250224-G-A 20088338-G-A DYZ19 ***
22337291-C-A 20175405-C-A DYZ19 ***
22341206-T-G 20179320-T-G DYZ19 ***
22341217-G-C 20179331-G-C DYZ19 ***
22367222-G-T 20205336-G-T DYZ19 ***
14258539-CA-TG 12137833-CA-TG ***
58843820-A-C 56747051-T-G ***
58843827-G-C 56747044-C-G ***
58843829-A-C 56747042-T-G ***
58843831-A-C 56747040-T-G ***
58843833-T-G 56747038-A-C ***
13378119-GC-CT 11222443-GC-CT ***
58846437-TTCCATTCAAA-T 56744416-GGAATGGATTT-G ***
13246280-G-T 11090604-G-T ***
9930334-CGGCT-TGGCG 10092725-CGGCT-TGGCG ***
13484493-T-A 11328817-T-A ***
22311623-G-T 20149737-G-T DYZ19 ***
19250664-G-GTT 17138784-G-GTT 45×T***
13467152-C-A 11311476-C-A ***
22491469-T-C 20329583-T-C DYZ19 ***
58876789-G-C 56714082-C-G 4×CATTC***
58912938-A-C 56677933-T-G ***
21482762-C-T 19320876-C-T 19×T***
58835766-GCATTC-G 56755075-AAATGG-A 5×CATTC***
58912947-C-T 56677924-G-A ***
58874574-C-G 56716297-G-C ***
22268233-G-T 20106347-G-T DYZ19 ***
19611206-C-T 17499326-C-T P5_Prx 26×T***
22232168-A-T 20070282-A-T DYZ19 ***
22232192-G-T 20070306-G-T DYZ19 ***
22353445-A-G 20191559-A-G DYZ19 ***
58841320-C-T 56749551-G-A ***
58843619-C-G 56747252-G-C ***
58867576-C-G 56723295-G-C ***
6093471-G-A 6225430-G-A ***
13515340-G-T 11359664-G-T ***
22337235-G-A 20175349-G-A DYZ19 ***
20368187-A-C 18206301-A-C P5_Dst ***
20368163-T-A 18206277-T-A P5_Dst ***
20368166-C-A 18206280-C-A P5_Dst ***
20368169-T-C 18206283-T-C P5_Dst ***
20368170-G-A 18206284-G-A P5_Dst ***
20368174-G-A 18206288-G-A P5_Dst ***
20368175-G-A 18206289-G-A P5_Dst ***
20368186-T-G 18206300-T-G P5_Dst ***
20368191-A-T 18206305-A-T P5_Dst ***
20368157-C-T 18206271-C-T P5_Dst ***
20368200-A-T 18206314-A-T P5_Dst ***
22252900-C-A 20091014-C-A DYZ19 ***
22481317-C-A 20319431-C-A DYZ19 ***
22498439-T-G 20336553-T-G DYZ19 ***
58829081-T-A 56761790-A-T ***
58844918-A-T 56745953-T-A ***
22337206-C-G 20175320-C-G DYZ19 ***
20368162-A-G 18206276-A-G P5_Dst ***
20368153-T-C 18206267-T-C P5_Dst ***
13514085-A-G 11358409-A-G ***
58843749-T-C 56747122-A-G ***
13842510-T-A 11721804-T-A ***
22252915-T-A 20091029-T-A DYZ19 ***
22252918-T-A 20091032-T-A DYZ19 ***
58856239-T-C 56734632-A-G ***
22420952-T-C 20259066-T-C DYZ19 ***
22420975-C-G 20259089-C-G DYZ19 ***
26508288-C-G 24362141-C-G P1_Y1 ***
22252883-ATGA-GTGT 20090997-ATGA-GTGT DYZ19 ***
20367955-G-T 18206069-G-T P5_Dst ***
22361163-GT-AC 20199277-GT-AC DYZ19 ***
22420995-TG-AT 20259109-TG-AT DYZ19 ***
22480990-GTG-ATT 20319104-GTG-ATT DYZ19 ***
13256418-A-G 11100742-A-G ***
20367902-A-T 18206016-A-T P5_Dst ***
20367923-A-T 18206037-A-T P5_Dst ***
20367939-T-A 18206053-T-A P5_Dst ***
20367949-G-C 18206063-G-C P5_Dst ***
9330338-A-G 9492729-A-G ***
9541730-C-A 9704121-C-A IR3_Prx ***
22250896-T-A 20089010-T-A DYZ19 ***
17569254-G-A 15457374-G-A ***
15912055-C-T 13800175-C-T M12014 21×T***
16309113-C-T 14197233-C-T ***
16411070-A-G 14299190-A-G ***
16701644-A-G 14589764-A-G ***
16713525-C-T 14601645-C-T ***
16995108-A-G 14883228-A-G ***
17481418-G-A 15369538-G-A ***
17597744-G-A 15485864-G-A 14×A***
15639980-A-T 13528100-A-T ***
17885608-T-C 15773728-T-C ***
17994916-T-A 15883036-T-A P7_Prx ***
17994917-C-A 15883037-C-A P7_Prx ***
18016222-A-T 15904342-A-T P7_Dst ***
18141213-T-G 16029333-T-G ***
18141280-A-T 16029400-A-T ***
18141927-G-A 16030047-G-A ***
15853509-G-T 13741629-G-T ***
15116669-C-T 13004756-C-T Y67764 ***
18456287-C-T 16344407-C-T P6_Dst ***
13726743-G-A 11571067-G-A ***
13723586-G-T 11567910-G-T ***
13723587-G-T 11567911-G-T ***
13723591-G-C 11567915-G-C ***
13723596-G-A 11567920-G-A ***
13725379-A-T 11569703-A-T ***
13725399-C-T 11569723-C-T ***
13726697-C-G 11571021-C-G ***
13734889-T-A 11579213-T-A ***
14630546-T-C 12518615-T-C ***
13734894-T-G 11579218-T-G ***
13734913-A-C 11579237-A-C ***
13734919-T-A 11579243-T-A ***
13734934-A-T 11579258-A-T ***
13734936-G-T 11579260-G-T ***
13740743-A-G 11585067-A-G ***
13740865-A-C 11585189-A-C ***
14097927-A-G 11977221-A-G ***
18294058-A-C 16182178-A-C P6_Prx ***
18728740-G-A 16616860-G-A ***
13722523-G-A 11566847-G-A ***
20775697-A-T 18613811-A-T P4_Prx ***
20591292-T-G 18429406-T-G P5_Dst ***
20591293-T-C 18429407-T-C P5_Dst ***
20725975-G-T 18564089-G-T P4_Prx ***
20725983-T-A 18564097-T-A P4_Prx ***
20725996-C-A 18564110-C-A P4_Prx ***
20775694-C-T 18613808-C-T P4_Prx ***
20775696-C-T 18613810-C-T P4_Prx ***
20793475-T-C 18631589-T-C P4_Prx ***
20591279-A-C 18429393-A-C P5_Dst ***
21417853-A-G 19255967-A-G ***
21676853-A-G 19514967-A-G ***
21915473-G-A 19753587-G-A ***
22234424-C-G 20072538-C-G DYZ19 ***
22234427-T-A 20072541-T-A DYZ19 ***
22248457-G-T 20086571-G-T DYZ19 ***
22250887-G-C 20089001-G-C DYZ19 ***
7484034-G-GA 7615993-G-GA IR1_L 11×A***
20591277-A-C 18429391-A-C P5_Dst ***
19012978-G-A 16901098-G-A ***
19644389-T-A 17532509-T-A P5_Prx ***
19016764-T-G 16904884-T-G ***
19071305-T-G 16959425-T-G ***
19579887-C-A 17468007-C-A P5_Prx ***
19579893-G-A 17468013-G-A P5_Prx ***
19579894-T-A 17468014-T-A P5_Prx ***
19579906-T-A 17468026-T-A P5_Prx ***
19610119-C-T 17498239-C-T P5_Prx ***
19644390-T-A 17532510-T-A P5_Prx ***
20591273-T-C 18429387-T-C P5_Dst ***
19644393-T-A 17532513-T-A P5_Prx ***
19644395-C-A 17532515-C-A P5_Prx ***
19644398-C-A 17532518-C-A P5_Prx ***
19644401-C-T 17532521-C-T P5_Prx ***
20368176-G-A 18206290-G-A P5_Dst ***
20486995-A-T 18325109-A-T P5_Dst ***
20591266-C-T 18429380-C-T P5_Dst ***
20591272-A-C 18429386-A-C P5_Dst ***
13722528-G-T 11566852-G-T ***
13716290-C-A 11560614-C-A ***
9541831-G-T 9704222-G-T IR3_Prx ***
13251461-C-A 11095785-C-A ***
13222177-G-A 11066501-G-A ***
13222207-A-G 11066531-A-G ***
13222326-A-G 11066650-A-G ***
13223569-A-G 11067893-A-G ***
13223697-A-C 11068021-A-C ***
13250569-T-G 11094893-T-G ***
13251387-C-A 11095711-C-A ***
13251978-A-T 11096302-A-T ***
13110261-T-G 10599747-T-G ***
13253040-C-A 11097364-C-A ***
13254522-C-A 11098846-C-A ***
13256023-C-A 11100347-C-A ***
13258251-G-C 11102575-G-C ZS7857 ***
13322814-G-A 11167138-G-A ***
13328664-G-T 11172988-G-T ***
13329200-G-C 11173524-G-C ***
13222169-A-G 11066493-A-G ***
13110242-C-A 10599728-C-A ***
13460172-G-T 11304496-G-T ***
10034827-T-G 10197218-T-G ***
9576371-G-A 9738762-G-A IR3_Prx ***
9576374-G-T 9738765-G-T IR3_Prx ***
9576375-G-C 9738766-G-C IR3_Prx ***
9784020-A-T 9946411-A-T ***
9930349-C-G 10092740-C-G ***
9962341-A-C 10124732-A-C ***
10034819-T-G 10197210-T-G ***
13107719-G-A 10597205-G-A ***
13110228-C-A 10599714-C-A ***
13109014-A-C 10598500-A-C ***
13109044-C-A 10598530-C-A ***
13109060-A-G 10598546-A-G ***
13109068-T-A 10598554-T-A ***
13109084-A-T 10598570-A-T ***
13109087-C-G 10598573-C-G ***
13109091-A-G 10598577-A-G ***
13109093-A-G 10598579-A-G ***
13407401-C-T 11251725-C-T ***
13460770-A-C 11305094-A-C ***
13716288-G-T 11560612-G-T ***
13562246-T-C 11406570-T-C ***
13480909-C-A 11325233-C-A ***
13481470-C-T 11325794-C-T ***
13483013-T-G 11327337-T-G ***
13484490-G-T 11328814-G-T ***
13484765-A-T 11329089-A-T ***
13516726-G-A 11361050-G-A ***
13517372-A-G 11361696-A-G ***
13612939-T-C 11457263-T-C ***
13480727-A-G 11325051-A-G ***
13703120-G-A 11547444-G-A ***
13714956-C-G 11559280-C-G ***
13714969-C-A 11559293-C-A ***
13716262-C-T 11560586-C-T ***
13716272-A-T 11560596-A-T ***
13716275-A-T 11560599-A-T ***
13716283-G-T 11560607-G-T ***
13480736-C-T 11325060-C-T ***
13479696-G-C 11324020-G-C ***
13460945-A-T 11305269-A-T ***
13465637-T-A 11309961-T-A ***
13463997-T-A 11308321-T-A ***
13464005-C-A 11308329-C-A ***
13464026-G-A 11308350-G-A ***
13465319-A-G 11309643-A-G ***
13465321-C-A 11309645-C-A ***
13465398-C-A 11309722-C-A ***
13465634-T-G 11309958-T-G ***
13465640-A-T 11309964-A-T ***
13479550-C-A 11323874-C-A ***
13467711-C-A 11312035-C-A ***
13470126-G-T 11314450-G-T ***
13473401-T-C 11317725-T-C ***
13473498-G-C 11317822-G-C ***
13473535-G-A 11317859-G-A ***
13475539-G-A 11319863-G-A ***
13478730-A-C 11323054-A-C ***
13478978-G-T 11323302-G-T ***
58917656-CNN-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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