Tree Position

R-U106/S21 > Z2265 > Z381/S263 > Z301/S499 > L48 > L47/S170 > Z160 > S3251 > FGC8604 > ZZ66 > Y3264 > Y3465 > Y3265 > Y3462 > FGC8587 > BY3316 > FGC8580 > FGC8591 > FGC8571 > FGC8597

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
NUMH7
6940516-G-A 7072475-G-A FGC8572 YY+
7507622-G-A 7639581-G-A FGC8577 Y+
13623297-C-T 11467621-C-T FGC8581 +
14883859-G-A 12771925-G-A FGC8585 YY+
16009380-T-C 13897500-T-C FGC8588 Y+
28517942-G-A 26371795-G-A FGC8603 +
17265701-C-T 15153821-C-T FGC8592 Y*
18818270-C-T 16706390-C-T FGC8595 Y*
18975680-A-G 16863800-A-G FGC8596 Y*
21450574-G-A 19288688-G-A FGC8598 YY*
22794483-C-CT 20632597-C-CT *
7211965-A-C 7343924-A-C **
21376157-T-C 19214271-T-C **
3685702-T-A 3817661-T-A **
13324604-T-C 11168928-T-C **
13717009-A-G 11561333-A-G **
14165217-G-A 12044511-G-A **
19746077-G-GTATC 17634197-G-GTATC P5_Prx 5×TATC**
58841040-G-C 56749831-C-G 4×CATTC***
22236745-T-C 20074859-T-C DYZ19 ***
58843684-A-G 56747187-T-C ***
22366506-CAA-GAG 20204620-CAA-GAG DYZ19 ***
22421783-GC-CT 20259897-GC-CT DYZ19 ***
13489820-TGGT-CGGC 11334144-TGGT-CGGC ***
10033512-C-T 10195903-C-T ***
27056034-T-C 24909887-T-C P1_r4 ***
22421969-G-T 20260083-G-T DYZ19 ***
9215444-G-T 9377835-G-T ***
13484476-G-A 11328800-G-A ***
22231785-A-T 20069899-A-T DYZ19 ***
22263842-T-C 20101956-T-C BY214780 DYZ19 ***
58840716-T-C 56750155-A-G ***
58848367-G-C 56742504-C-G ***
19937284-G-GCCCCCCCCCCC 17825404-G-GCCCCCCCCCCC P5_Prx 13×C***
22503401-AAC-CAG 20341515-AAC-CAG DYZ19 ***
58903878-ATTCCTTTCCATTAAT-A 56686973-TGGAAATTAATGGAAA-T ***
22236511-C-A 20074625-C-A DYZ19 ***
22421683-T-A 20259797-T-A DYZ19 ***
27637426-A-G 25491279-A-G P1_Y2 ***
58840611-C-A 56750260-G-T ***
58843791-T-A 56747080-A-T ***
58848519-G-C 56742352-C-G ***
58856239-T-C 56734632-A-G ***
58868293-G-A 56722578-C-T ***
13489029-TGCGC-CACGT 11333353-TGCGC-CACGT ***
22319024-T-TC 20157138-T-TC DYZ19 ***
58910658-GCATTCCATTC-G 56680183-AAATGGAATGG-A 5×CATTC***
22364847-T-G 20202961-T-G DYZ19 ***
22292233-T-A 20130347-T-A DYZ19 ***
22357635-G-T 20195749-G-T DYZ19 ***
22420952-T-C 20259066-T-C DYZ19 ***
22420975-C-G 20259089-C-G DYZ19 ***
58838400-C-A 56752471-G-T ***
58874519-T-C 56716352-A-G ***
58874539-A-C 56716332-T-G ***
13483584-AC-A 11327908-AC-A ***
22341141-GTG-ATT 20179255-GTG-ATT DYZ19 ***
22420995-TG-AT 20259109-TG-AT DYZ19 ***
22367155-T-A 20205269-T-A DYZ19 ***
22367160-G-T 20205274-G-T DYZ19 ***
22367164-T-G 20205278-T-G DYZ19 ***
58843797-A-T 56747074-T-A ***
58848529-G-C 56742342-C-G ***
58874924-A-C 56715947-T-G ***
26152094-TCTC-CCTT 24005947-TCTC-CCTT P1_Y1 ***
58848518-AG-TC 56742352-CT-GA ***
22292968-A-G 20131082-A-G DYZ19 ***
22245026-T-C 20083140-T-C DYZ19 ***
22292969-T-A 20131083-T-A DYZ19 ***
22491445-T-G 20329559-T-G DYZ19 ***
58877109-G-C 56713762-C-G ***
13460530-TC-CCT 11304854-TC-CCT ***
27462490-C-A 25316343-C-A P1_Y2 ***
13486126-T-C 11330450-T-C BY30135 ***
13728253-A-T 11572577-A-T ***
13728254-C-G 11572578-C-G ***
22226618-A-C 20064732-A-C DYZ19 ***
22292227-A-G 20130341-A-G DYZ19 ***
58881418-G-A 56709453-C-T ***
58838370-C-A 56752501-G-T ***
20574448-C-T 18412562-C-T P5_Dst ***
22504416-C-A 20342530-C-A DYZ19 ***
28802798-T-G 26656651-T-G ***
13486155-A-G 11330479-A-G ***
58868288-A-C 56722583-T-G ***
58831534-A-T 56759337-T-A ***
58882545-T-G 56708326-A-C ***
22360294-GGC-CGA 20198408-GGC-CGA DYZ19 ***
28802746-TTCAAATTGCATA-ATGGAATGGAAAG 26656599-TTCAAATTGCATA-ATGGAATGGAAAG ***
58848953-T-C 56741918-A-G ***
58836578-T-A 56754293-A-T ***
13110184-C-T 10599670-C-T ***
21482757-C-T 19320871-C-T ***
13110261-T-G 10599747-T-G ***
58847206-T-A 56743665-A-T ***
13476136-CAAGC-TAAGA 11320460-CAAGC-TAAGA ***
10015025-A-G 10177416-A-G ***
13728606-G-A 11572930-G-A ***
13728612-C-T 11572936-C-T ***
15885057-T-G 13773177-T-G ***
20574360-G-A 18412474-G-A P5_Dst ***
20574361-G-A 18412475-G-A P5_Dst ***
22355178-C-G 20193292-C-G DYZ19 ***
22297112-AGTTTG-TTTTT 20135226-AGTTTG-TTTTT DYZ19 ***
20005659-A-T 17893779-A-T P5_Prx ***
22292975-T-A 20131089-T-A DYZ19 ***
22421550-A-T 20259664-A-T DYZ19 ***
58865793-A-C 56725078-T-G ***
8462064-C-CAAAA 8594023-C-CAAAA 26×A***
13110584-C-A 10600070-C-A ***
22421675-A-T 20259789-A-T DYZ19 ***
13465631-AGC-TGA 11309955-AGC-TGA ***
8005623-T-C 8137582-T-C ***
8005624-A-T 8137583-A-T ***
20574943-TG-T 18413057-TG-T P5_Dst ***
58865679-C-A 56725192-G-T ***
58865656-G-T 56725215-C-A ***
58877047-A-C 56713824-T-G ***
58893216-C-A 56697655-G-T ***
13734147-TC-GA 11578471-TC-GA ***
22426444-T-G 20264558-T-G DYZ19 ***
22504362-G-T 20342476-G-T DYZ19 ***
59007959-C-CAAAAAAAA 56861812-C-CAAAAAAAA 26×A***
13110187-A-G 10599673-A-G ***
58843685-G-C 56747186-C-G ***
13648336-C-G 11492660-C-G 4×AATGG***
22244984-TA-GC 20083098-TA-GC DYZ19 ***
22289731-TG-GA 20127845-TG-GA DYZ19 ***
13734057-G-C 11578381-G-C ***
58873038-T-C 56717833-A-G ***
22366640-C-T 20204754-C-T DYZ19 ***
58847152-G-A 56743719-C-T ***
58847196-T-A 56743675-A-T ***
13434927-A-C 11279251-A-C ***
22355309-G-C 20193423-G-C DYZ19 ***
58874533-T-C 56716338-A-G ***
22361163-GT-TC 20199277-GT-TC DYZ19 ***
20143886-N-A 18032006-A-. P5_Dst ***
58828858-C-G 56762013-G-C ***
58847150-C-T 56743721-G-A ***
22292230-C-A 20130344-C-A DYZ19 ***
22292962-T-G 20131076-T-G DYZ19 ***
22292963-G-T 20131077-G-T DYZ19 ***
22426441-A-T 20264555-A-T DYZ19 ***
22426450-T-G 20264564-T-G DYZ19 ***
58909253-G-T 56681618-C-A ***
22292254-C-T 20130368-C-T DYZ19 ***
22292259-G-T 20130373-G-T DYZ19 ***
5815590-A-G 5947549-A-G ***
13258092-T-C 11102416-T-C ***
15278811-A-T 13166905-A-T ***
18230822-G-T 16118942-G-T ***
26834299-C-T 24688152-C-T P1_g2 ***
58881117-T-C 56709754-A-G ***
20462569-G-C 18300683-G-C P5_Dst ***
20462571-GTATAAG-CT 18300685-GTATAAG-CT P5_Dst ***
58874534-G-C 56716337-C-G ***
26152094-T-C 24005947-T-C P1_Y1 ***
9570727-T-G 9733118-T-G IR3_Prx ***
9570733-G-A 9733124-G-A IR3_Prx ***
9754157-A-T 9916548-A-T ***
24535791-G-T 22389644-G-T P3_t2 ***
58843676-G-A 56747195-C-T ***
10006444-A-C 10168835-A-C ***
13728417-A-T 11572741-A-T ***
13482874-T-A 11327198-T-A ***
27421392-C-T 25275245-C-T P1_g3 ***
10033526-A-G 10195917-A-G S13018 ***
13418645-T-TA 11262969-T-TA ***
13206784-C-A 11051108-C-A 14×A***
22337546-C-T 20175660-C-T DYZ19 ***
22344224-T-A 20182338-T-A DYZ19 ***
13804794-CTCGTAT-ATCAAAG 11684088-CTCGTAT-ATCAAAG ***
13110188-T-G 10599674-T-G ***
25709386-G-GTTTTTTTTT 23563239-G-GTTTTTTTTT P1_b3 31×T***
19012969-A-C 16901089-A-C ***
58837915-TCCATTTGATGCCATC-T 56752936-CATGGGATGGCATCAA-C ***
13475731-T-G 11320055-T-G ***
58893713-G-T 56697158-C-A ***
22355142-GGT-AGG 20193256-GGT-AGG DYZ19 ***
22355195-CAA-AAG 20193309-CAA-AAG DYZ19 ***
21840735-C-T 19678849-C-T ***
22491364-G-A 20329478-G-A DYZ19 ***
58836589-G-T 56754282-C-A ***
58836590-C-T 56754281-G-A 4×CCATT***
22421656-T-C 20259770-T-C DYZ19 ***
22421661-C-T 20259775-C-T DYZ19 ***
22421663-C-A 20259777-C-A DYZ19 ***
22421685-C-A 20259799-C-A DYZ19 ***
13203968-GACCACCCCGCCTC-AATGACGGTAT 11048292-GACCACCCCGCCTC-AATGACGGTAT ***
22355106-GTTATG-TTTGTT 20193220-GTTATG-TTTGTT DYZ19 ***
28120142-A-C 25973995-A-C P1_b4 ***
7573145-C-A 7705104-C-A 22×A***
22364840-C-T 20202954-C-T DYZ19 ***
7414305-G-A 7546264-G-A BY25523 ***
22337491-C-T 20175605-C-T DYZ19 ***
22491372-T-C 20329486-T-C DYZ19 ***
13256068-GTG-TTA 11100392-GTG-TTA ***
22359154-C-A 20197268-C-A DYZ19 ***
13728657-GTGG-TTGT 11572981-GTGG-TTGT ***
6216398-C-T 6348357-C-T IR3_Dst ***
19098441-A-G 16986561-A-G ***
22251587-CACTA-AACTT 20089701-CACTA-AACTT DYZ19 ***
8724678-A-G 8856637-A-G ***
13481775-C-A 11326099-C-A ***
26500980-A-G 24354833-A-G P1_Y1 ***
58893720-A-T 56697151-T-A ***
2676836-T-A 2808795-T-A ***
3902522-A-T 4034481-A-T ***
4152225-T-A 4284184-T-A ***
5065667-A-C 5197626-A-C ***
5179977-G-A 5311936-G-A ***
5555653-A-C 5687612-A-C ***
5624078-A-G 5756037-A-G ***
5779371-T-C 5911330-T-C ***
5903240-G-T 6035199-G-T ***
6148672-G-A 6280631-G-A IR3_Dst ***
6172777-C-G 6304736-C-G IR3_Dst ***
6216346-G-A 6348305-G-A IR3_Dst ***
6216354-C-A 6348313-C-A IR3_Dst ***
6216359-G-A 6348318-G-A IR3_Dst ***
6216363-C-T 6348322-C-T IR3_Dst ***
6216372-A-G 6348331-A-G IR3_Dst ***
6216429-T-C 6348388-T-C IR3_Dst ***
6216447-C-T 6348406-C-T IR3_Dst ***
6233703-G-A 6365662-G-A IR3_Dst ***
6233719-A-T 6365678-A-T IR3_Dst ***
6233731-C-T 6365690-C-T IR3_Dst ***
6235367-G-A 6367326-G-A IR3_Dst ***
6235370-T-A 6367329-T-A IR3_Dst ***
6235384-C-A 6367343-C-A IR3_Dst ***
6235387-G-A 6367346-G-A IR3_Dst ***
6235390-C-G 6367349-C-G IR3_Dst ***
6235405-C-A 6367364-C-A IR3_Dst ***
6235406-C-A 6367365-C-A IR3_Dst ***
6262524-G-A 6394483-G-A IR3_Dst ***
6262528-T-G 6394487-T-G IR3_Dst ***
6262550-A-T 6394509-A-T IR3_Dst ***
6262579-A-T 6394538-A-T IR3_Dst ***
6262580-A-T 6394539-A-T IR3_Dst ***
6262584-A-C 6394543-A-C IR3_Dst ***
6262585-A-T 6394544-A-T IR3_Dst ***
6305947-T-A 6437906-T-A IR3_Dst ***
6612580-A-T 6744539-A-T ***
7985410-G-A 8117369-G-A ***
8004680-G-A 8136639-G-A ***
8174714-G-T 8306673-G-T ***
9302436-C-G 9464827-C-G ***
9354306-T-A 9516697-T-A ***
9367739-A-G 9530130-A-G ***
9570652-C-T 9733043-C-T IR3_Prx ***
9570654-A-T 9733045-A-T IR3_Prx ***
9570692-A-G 9733083-A-G IR3_Prx ***
9570696-A-C 9733087-A-C IR3_Prx ***
9570707-A-G 9733098-A-G IR3_Prx ***
9570732-T-C 9733123-T-C IR3_Prx ***
9570738-A-C 9733129-A-C IR3_Prx ***
9570741-C-A 9733132-C-A IR3_Prx ***
9570742-A-G 9733133-A-G IR3_Prx ***
9570753-A-T 9733144-A-T IR3_Prx ***
9570771-A-C 9733162-A-C IR3_Prx ***
9570810-C-T 9733201-C-T IR3_Prx ***
9611104-C-A 9773495-C-A IR3_Prx ***
9611107-A-G 9773498-A-G IR3_Prx ***
9611108-T-G 9773499-T-G IR3_Prx ***
9611113-T-C 9773504-T-C IR3_Prx ***
9754155-G-T 9916546-G-T ***
9754164-A-T 9916555-A-T ***
10006430-A-G 10168821-A-G ***
10059236-C-T 10221627-C-T ***
10059250-A-G 10221641-A-G ***
10073454-A-T 10235845-A-T ***
13105939-C-T 10595425-C-T ***
13105944-A-C 10595430-A-C ***
13105945-G-C 10595431-G-C ***
13106407-G-A 10595893-G-A ***
13106417-C-A 10595903-C-A ***
13106441-A-G 10595927-A-G ***
13106444-C-G 10595930-C-G ***
13106451-C-T 10595937-C-T ***
13110247-T-A 10599733-T-A ***
13110251-C-T 10599737-C-T ***
13110259-G-C 10599745-G-C ***
13110260-A-T 10599746-A-T ***
13110595-A-G 10600081-A-G ***
13407276-G-A 11251600-G-A ***
13465400-G-T 11309724-G-T ***
13473072-A-G 11317396-A-G ***
13475654-C-G 11319978-C-G ***
13475712-T-G 11320036-T-G ***
13475763-T-A 11320087-T-A ***
13481814-A-T 11326138-A-T ***
13483541-A-G 11327865-A-G ***
13606899-A-G 11451223-A-G ***
13716365-A-G 11560689-A-G ***
13716371-A-T 11560695-A-T ***
13716373-G-A 11560697-G-A ***
13716375-A-G 11560699-A-G ***
13734257-G-A 11578581-G-A ***
13799428-T-A 11678722-T-A ***
13825422-A-G 11704716-A-G ***
13862333-G-T 11741627-G-T ***
14045562-C-T 11924856-C-T ***
14473323-C-T 12352592-C-T ***
14556196-C-A 12444397-C-A ***
15215182-C-A 13103268-C-A ***
15287376-C-T 13175475-C-T ***
15293907-T-C 13182006-T-C ***
15350683-C-T 13238802-C-T ***
15509380-C-A 13397500-C-A ***
15636590-G-A 13524710-G-A ***
15672330-A-G 13560450-A-G ***
15806439-A-C 13694559-A-C ***
15806450-C-T 13694570-C-T ***
16313122-A-G 14201242-A-G ***
16313125-A-G 14201245-A-G ***
16313129-A-G 14201249-A-G ***
16815579-G-A 14703699-G-A ***
18042518-T-G 15930638-T-G ***
18530837-C-A 16418957-C-A P6_Dst ***
18952906-A-G 16841026-A-G ***
19013061-A-C 16901181-A-C ***
19319850-A-T 17207970-A-T ***
19656811-C-A 17544931-C-A P5_Prx ***
19657044-C-G 17545164-C-G P5_Prx ***
19657067-T-C 17545187-T-C P5_Prx ***
19657091-G-C 17545211-G-C P5_Prx ***
19657106-G-T 17545226-G-T P5_Prx ***
19657113-G-A 17545233-G-A P5_Prx ***
19657121-C-T 17545241-C-T P5_Prx ***
19699515-C-T 17587635-C-T P5_Prx ***
19699519-T-A 17587639-T-A P5_Prx ***
19699521-A-C 17587641-A-C P5_Prx ***
19699526-T-A 17587646-T-A P5_Prx ***
19699527-T-A 17587647-T-A P5_Prx ***
19699558-G-T 17587678-G-T P5_Prx ***
19753115-C-A 17641235-C-A P5_Prx ***
19753129-T-A 17641249-T-A P5_Prx ***
19753139-G-T 17641259-G-T P5_Prx ***
19753149-G-A 17641269-G-A P5_Prx ***
19827791-C-A 17715911-C-A P5_Prx ***
19847631-C-T 17735751-C-T P5_Prx ***
19888003-T-C 17776123-T-C P5_Prx ***
19888007-A-G 17776127-A-G P5_Prx ***
20001588-A-T 17889708-A-T P5_Prx ***
20005608-A-T 17893728-A-T P5_Prx ***
20005611-A-T 17893731-A-T P5_Prx ***
20005623-A-T 17893743-A-T P5_Prx ***
20005634-C-A 17893754-C-A P5_Prx ***
20005636-C-A 17893756-C-A P5_Prx ***
20005638-G-T 17893758-G-T P5_Prx ***
20022617-G-A 17910737-G-A P5_Prx ***
20022630-C-A 17910750-C-A P5_Prx ***
20022631-T-A 17910751-T-A P5_Prx ***
20022633-C-A 17910753-C-A P5_Prx ***
20062826-A-T 17950946-A-T P5_Prx ***
20318576-G-A 18156690-G-A P5_Dst ***
20489344-G-A 18327458-G-A P5_Dst ***
20500800-G-A 18338914-G-A P5_Dst ***
20535994-A-G 18374108-A-G P5_Dst ***
20535997-T-C 18374111-T-C P5_Dst ***
20540749-C-G 18378863-C-G P5_Dst ***
20540770-G-A 18378884-G-A P5_Dst ***
20540992-T-C 18379106-T-C P5_Dst ***
20541018-C-T 18379132-C-T P5_Dst ***
20570467-T-A 18408581-T-A P5_Dst ***
20574443-A-G 18412557-A-G P5_Dst ***
20655028-G-A 18493142-G-A P4_Prx ***
21085805-A-C 18923919-A-C ***
21539469-A-T 19377583-A-T ***
21840745-T-C 19678859-T-C ***
21840747-T-G 19678861-T-G ***
21887940-A-G 19726054-A-G ***
22232380-A-T 20070494-A-T DYZ19 ***
22236518-G-T 20074632-G-T DYZ19 ***
22248371-G-A 20086485-G-A DYZ19 ***
22252790-T-A 20090904-T-A DYZ19 ***
22252793-T-A 20090907-T-A DYZ19 ***
22252802-C-T 20090916-C-T DYZ19 ***
22252816-T-C 20090930-T-C DYZ19 ***
22292255-C-T 20130369-C-T DYZ19 ***
22297502-A-G 20135616-A-G DYZ19 ***
22337497-G-A 20175611-G-A DYZ19 ***
22337541-C-A 20175655-C-A DYZ19 ***
22337551-A-C 20175665-A-C DYZ19 ***
22337552-G-T 20175666-G-T DYZ19 ***
22342105-C-T 20180219-C-T DYZ19 ***
22342113-G-T 20180227-G-T DYZ19 ***
22344201-A-C 20182315-A-C DYZ19 ***
22364753-C-A 20202867-C-A DYZ19 ***
22364754-C-A 20202868-C-A DYZ19 ***
22364829-A-G 20202943-A-G DYZ19 ***
22364843-A-T 20202957-A-T DYZ19 ***
22365995-T-C 20204109-T-C DYZ19 ***
22366006-G-T 20204120-G-T DYZ19 ***
22367149-G-C 20205263-G-C DYZ19 ***
22367151-G-T 20205265-G-T DYZ19 ***
22421829-G-T 20259943-G-T DYZ19 ***
22421832-C-T 20259946-C-T DYZ19 ***
22447734-G-T 20285848-G-T BY168963 DYZ19 ***
22490094-G-A 20328208-G-A DYZ19 ***
22490201-G-T 20328315-G-T DYZ19 ***
22490983-T-G 20329097-T-G DYZ19 ***
22490989-A-C 20329103-A-C DYZ19 ***
22491318-A-T 20329432-A-T DYZ19 ***
22491326-G-T 20329440-G-T DYZ19 ***
22504811-A-G 20342925-A-G DYZ19 ***
22534903-A-T 20373017-A-T ***
22534917-A-T 20373031-A-T ***
22534925-C-A 20373039-C-A ***
22534964-C-A 20373078-C-A F14638 ***
22534965-G-A 20373079-G-A FTB21841 ***
22790950-A-T 20629064-A-T ***
23109823-C-T 20947937-C-T ***
24013508-G-A 21867361-G-A ***
24013522-T-A 21867375-T-A ***
24013526-T-A 21867379-T-A ***
24052239-A-T 21906092-A-T P3_b1 ***
24115436-C-T 21969289-C-T P3_b1 ***
24535759-A-T 22389612-A-T P3_t2 ***
24535761-A-T 22389614-A-T P3_t2 ***
24535766-G-C 22389619-G-C P3_t2 ***
24535839-C-T 22389692-C-T P3_t2 ***
24535971-A-G 22389824-A-G P3_t2 ***
24535972-A-T 22389825-A-T P3_t2 ***
24535982-A-T 22389835-A-T P3_t2 ***
24535997-G-A 22389850-G-A P3_t2 ***
24616388-C-A 22470241-C-A P3_t2 ***
24616390-T-A 22470243-T-A P3_t2 ***
24892987-A-G 22746840-A-G g1 ***
26174547-C-A 24028400-C-A P1_Y1 ***
26174548-T-A 24028401-T-A P1_Y1 ***
26174568-A-T 24028421-A-T P1_Y1 ***
26174574-C-G 24028427-C-G P1_Y1 ***
26248667-T-A 24102520-T-A P1_Y1 ***
26249289-G-A 24103142-G-A P1_Y1 ***
26483512-T-G 24337365-T-G P1_Y1 ***
27270593-T-A 25124446-T-A P1_g3 ***
27378596-G-T 25232449-G-T P1_g3 ***
27421360-C-T 25275213-C-T P1_g3 ***
27421420-A-G 25275273-A-G P1_g3 ***
27421436-G-A 25275289-G-A P1_g3 ***
27522875-T-A 25376728-T-A P1_Y2 ***
27816169-G-A 25670022-G-A P1_Y2 ***
27816191-T-C 25670044-T-C P1_Y2 ***
27967192-G-A 25821045-G-A P1_Y2 ***
27967610-C-A 25821463-C-A P1_Y2 ***
27967612-T-A 25821465-T-A P1_Y2 ***
27967617-T-A 25821470-T-A P1_Y2 ***
27967625-G-A 25821478-G-A P1_Y2 ***
28000099-C-A 25853952-C-A P1_Y2 ***
28000110-G-A 25853963-G-A P1_Y2 ***
28000122-T-A 25853975-T-A P1_Y2 ***
28000123-G-T 25853976-G-T P1_Y2 ***
28245727-T-C 26099580-T-C P1_b4 ***
58828923-C-G 56761948-G-C ***
58829105-A-T 56761766-T-A ***
58831512-C-T 56759359-G-A ***
58831515-T-G 56759356-A-C ***
58831537-C-A 56759334-G-T ***
58833577-C-T 56757294-G-A ***
58836567-G-A 56754304-C-T ***
58836592-C-A 56754279-G-T ***
58838423-C-T 56752448-G-A ***
58838835-G-C 56752036-C-G ***
58841266-G-C 56749605-C-G ***
58841329-T-A 56749542-A-T ***
58842326-T-G 56748545-A-C ***
58842331-A-T 56748540-T-A ***
58843674-C-G 56747197-G-C ***
58843726-A-T 56747145-T-A ***
58845973-C-A 56744898-G-T ***
58846254-C-T 56744617-G-A ***
58847198-T-G 56743673-A-C ***
58847919-C-T 56742952-G-A ***
58847925-C-T 56742946-G-A ***
58848424-C-T 56742447-G-A ***
58848452-T-A 56742419-A-T ***
58848551-A-T 56742320-T-A ***
58856612-C-A 56734259-G-T ***
58863692-C-A 56727179-G-T ***
58865660-G-T 56725211-C-A ***
58865667-A-C 56725204-T-G ***
58865703-C-T 56725168-G-A ***
58865704-A-G 56725167-T-C ***
58865808-A-T 56725063-T-A ***
58865833-T-A 56725038-A-T ***
58868219-T-C 56722652-A-G ***
58868529-T-A 56722342-A-T ***
58876421-A-T 56714450-T-A ***
58877093-T-G 56713778-A-C ***
58880105-A-T 56710766-T-A ***
58880122-T-C 56710749-A-G ***
58889942-A-T 56700929-T-A ***
58890696-G-C 56700175-C-G ***
58893205-C-A 56697666-G-T ***
58893209-C-G 56697662-G-C ***
58893225-C-T 56697646-G-A ***
58893226-A-C 56697645-T-G ***
58893230-C-A 56697641-G-T ***
58893256-C-T 56697615-G-A ***
58893265-G-C 56697606-C-G ***
58893267-T-G 56697604-A-C ***
58893268-T-C 56697603-A-G ***
58909196-A-C 56681675-T-G ***
58909205-C-T 56681666-G-A ***
58909263-G-A 56681608-C-T ***
58909269-C-T 56681602-G-A ***
58910388-C-G 56680483-G-C ***
58913127-C-A 56677744-G-T ***
58916956-A-C 56673915-T-G ***
58916957-C-T 56673914-G-A ***
18872078-CCTTT-C 16760198-CCTTT-C ***
13467563-CCT-TCC 11311887-CCT-TCC ***
13477181-AGA-CGG 11321505-AGA-CGG ***
3374847-C-CAAAAA 3506806-C-CAAAAA 23×A***
6495498-GG-CT 6627457-GG-CT ***
6863818-CTTTTTTTTT-C 6995777-CTTTTTTTTT-C 21×T***
7131401-ACCG-CCCC 7263360-ACCG-CCCC ***
8481414-TATA-T 8613373-TATA-T ***
10061941-GCAA-ATAG 10224332-GCAA-ATAG ***
10073440-ATTCA-GCTCT 10235831-ATTCA-GCTCT ***
13203980-TC-T 11048304-TC-T ***
13392965-AG-CA 11237289-AG-CA ***
13459516-GTTCCATTCCATTCCATTCCA-G 11303840-GTTCCATTCCATTCCATTCCA-G 11×TTCCA***
13475703-GAGGC-AATAA 11320027-GAGGC-AATAA ***
13480166-CAGAGTA-TGGAGCC 11324490-CAGAGTA-TGGAGCC ***
13483555-TTTATATCACA-AATATGCCAC 11327879-TTTATATCACA-AATATGCCAC ***
13483612-TTCAG-ATCAC 11327936-TTCAG-ATCAC ***
14613459-C-CTTTTTTTT 12501657-C-CTTTTTTTT 26×T***
16996654-CTT-C 14884774-CTT-C 15×T***
18565061-C-CAAAAAA 16453181-C-CAAAAAA 27×A***
19071237-CA-AG 16959357-CA-AG ***
19071263-G-GT 16959383-G-GT ***
19071265-GGAA-G 16959385-GGAA-G ***
19853737-TGC-AA 17741857-TGC-AA P5_Prx ***
20569648-G-AAA 18407762-G-AAA P5_Dst ***
20655024-GTGTG-A 18493138-GTGTG-A P4_Prx ***
21553429-T-TTTTTTTTTTTTTTTA 19391543-T-TTTTTTTTTTTTTTTA ***
22232429-TACC-CACA 20070543-TACC-CACA DYZ19 ***
22421829-GCAC-TCAT 20259943-GCAC-TCAT DYZ19 ***
22480701-TTG-GTT 20318815-TTG-GTT DYZ19 ***
22894151-G-GAAAAAAA 20732265-G-GAAAAAAA 28×A***
23091485-TGG-T 20929599-TGG-T ***
24686428-C-CTTTTTT 22540281-C-CTTTTTT P3_b2 23×T***
27967197-C-CTT 25821050-C-CTT P1_Y2 ***
28491337-A-ACAACCACCCCC 26345190-A-ACAACCACCCCC ***
58829127-TC-CG 56761743-GA-CG ***
58873098-CTCC-GTCA 56717770-GGAG-TGAC ***
59004520-AAAGG-TTTAT 56858373-AAAGG-TTTAT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.