Byrne
BigY3: 56563, FTDNA: 56563, BigY2: 56563Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 56563 | FTDNA 56563 | BigY2 56563 |
---|---|---|---|---|---|---|---|---|---|---|
58978772-G-A | 56832625-G-A | A* | ||||||||
6233872-G-A | 6365831-G-A | IR3_Dst | A* | *** | A* | |||||
19682799-A-G | 17570919-A-G | P5_Prx | A* | *** | A* | |||||
13488782-G-A | 11333106-G-A | A* | ||||||||
18336563-C-G | 16224683-C-G | P6_Prx | A* | |||||||
14852779-T-A | 12740845-T-A | BY11189 | Y | Y | + | + | + | |||
15140735-T-C | 13028822-T-C | BY11190 | Y | Y | ** | + | + | |||
22477674-G-T | 20315788-G-T | FT460009 | DYZ19 | ** | ** | + | ||||
16271791-A-G | 14159911-A-G | FT85021 | Y | Y | + | ** | ||||
14016624-C-A | 11895918-C-A | FT84901 | Y | + | ||||||
22280366-A-T | 20118480-A-T | DYZ19 | * | *** | * | |||||
13140540-C-T | 10630026-C-T | ** | ||||||||
9347988-CTG-C | 9510379-CTG-C | 8×TG | ** | |||||||
4281910-C-A | 4413869-C-A | ** | ** | |||||||
13358265-C-T | 11202589-C-T | ** | ||||||||
13358325-T-C | 11202649-T-C | PF511 | ** | |||||||
18908112-A-G | 16796232-A-G | FGC10762 | ** | |||||||
8462064-C-CA | 8594023-C-CA | 26×A | ** | |||||||
14426037-A-AAT | 12305312-A-AAT | 8×AT | ** | |||||||
15658042-TTA-T | 13546162-TTA-T | ** | ||||||||
19112538-CCCTT-C | 17000658-CCCTT-C | 7×CCTT | ** | |||||||
19492802-G-A | 17380922-G-A | Z22101 | ** | |||||||
58998740-C-A | 56852593-C-A | ** | ||||||||
59027271-C-T | 56881124-C-T | ** | ||||||||
9735652-A-T | 9898043-A-T | IR3_Prx | ** | |||||||
13140505-T-C | 10629991-T-C | ** | ||||||||
24415718-TTATATATATATATATA-T | 22269571-TTATATATATATATATA-T | 31×TA | ** | |||||||
18733562-AT-A | 16621682-AT-A | 9×T | ** | |||||||
5241257-A-C | 5373216-A-C | ** | ||||||||
13463757-T-A | 11308081-T-A | ** | ||||||||
5844567-C-A | 5976526-C-A | ** | ||||||||
14250140-G-C | 12129434-G-C | ** | ||||||||
9983154-T-C | 10145545-T-C | ** | ||||||||
19271549-TAA-T | 17159669-TAA-T | 14×A | ** | |||||||
10761781-CTTCCA-C | ** | |||||||||
10693128-C-CCATTCCACTCCACTCCATTA | ** | |||||||||
18271018-GTTTT-G | 16159138-GTTTT-G | 17×T | ** | |||||||
7353528-GA-G | 7485487-GA-G | 8×A | ** | |||||||
13468320-G-A | 11312644-G-A | ** | ||||||||
14324894-CTTTT-C | 12204188-CTTTT-C | 26×T | ** | |||||||
10950409-T-A | ** | |||||||||
56707182-A-T | ** | |||||||||
10846847-T-G | ** | |||||||||
10846853-C-G | FT433895 | ** | ||||||||
15778648-CTTTT-C | 13666768-CTTTT-C | 15×T | ** | |||||||
28660484-C-A | 26514337-C-A | ** | ||||||||
17332630-C-A | 15220750-C-A | ** | ||||||||
10772642-A-C | ** | |||||||||
13468183-T-C | 11312507-T-C | ** | ||||||||
15622597-CAAAA-C | 13510717-CAAAA-C | 16×A | ** | |||||||
10790222-G-A | ** | |||||||||
13585274-C-A | 11429598-C-A | ** | ||||||||
13202779-C-A | 11047103-C-A | ** | ||||||||
20306164-C-A | 18144278-C-A | P5_Dst | ** | |||||||
10629996-C-G | ** | |||||||||
14278349-C-A | 12157643-C-A | ** | ||||||||
22204505-G-T | 20042619-G-T | ** | ||||||||
16783310-C-A | 14671430-C-A | ** | ||||||||
13971653-AAGTCAGGCAGGCAGGC-A | 11850947-AAGTCAGGCAGGCAGGC-A | ** | ||||||||
7221331-C-A | 7353290-C-A | ** | ||||||||
13468261-C-T | 11312585-C-T | ** | ||||||||
19479688-A-AGT | 17367808-A-AGT | 20×GT | *** | ** | ||||||
28731864-C-A | 26585717-C-A | ** | ||||||||
11017366-T-C | ** | |||||||||
16180943-C-A | 14069063-C-A | ** | ||||||||
10825208-T-A | ** | |||||||||
10954629-G-T | ** | |||||||||
14286928-CTTTT-C | 12166222-CTTTT-C | 16×T | ** | |||||||
28768752-C-T | 26622605-C-T | ** | ||||||||
13465986-C-A | 11310310-C-A | ** | ||||||||
13465990-G-A | 11310314-G-A | ** | ||||||||
7224288-C-A | 7356247-C-A | ** | ||||||||
23395834-A-T | 21233948-A-T | ** | ||||||||
8069959-ATTTT-A | 8201918-ATTTT-A | 19×T | ** | |||||||
14216311-C-A | 12095605-C-A | ** | ||||||||
6780620-C-A | 6912579-C-A | ** | ||||||||
13939626-C-A | 11818920-C-A | ** | ||||||||
10765824-C-A | ** | |||||||||
7409710-C-A | 7541669-C-A | ** | ||||||||
3073831-C-A | 3205790-C-A | ** | ||||||||
8658453-GATA-G | 8790412-GATA-G | 6×ATA | ** | |||||||
19189479-G-C | 17077599-G-C | ** | ||||||||
6435278-G-T | 6567237-G-T | ** | ||||||||
8389597-G-A | 8521556-G-A | ** | ||||||||
13446532-T-TCCAC | 11290856-T-TCCAC | ** | ||||||||
16417468-C-A | 14305588-C-A | ** | ||||||||
18929897-C-A | 16818017-C-A | ** | ||||||||
19030072-TAA-T | 16918192-TAA-T | 13×A | ** | |||||||
10800419-G-T | ** | |||||||||
10950447-C-CATCT | ** | |||||||||
10950460-ACCACTCTAATCCACT-A | ** | |||||||||
10869063-C-A | ** | |||||||||
19346663-C-A | 17234783-C-A | ** | ||||||||
28793781-T-A | 26647634-T-A | ** | ||||||||
17920845-G-C | 15808965-G-C | ** | ||||||||
14076902-C-A | 11956196-C-A | ** | ||||||||
13928816-C-A | 11808110-C-A | ** | ||||||||
24445490-C-A | 22299343-C-A | ** | ||||||||
28500125-C-A | 26353978-C-A | ** | ||||||||
7564370-C-A | 7696329-C-A | ** | ||||||||
13521181-C-A | 11365505-C-A | ** | ||||||||
17462086-C-A | 15350206-C-A | ** | ||||||||
9524180-G-T | 9686571-G-T | ** | ||||||||
15440020-T-A | 13328140-T-A | ** | ||||||||
28622245-C-A | 26476098-C-A | ** | ||||||||
56841133-T-A | ** | |||||||||
13909826-C-A | 11789120-C-A | ** | ||||||||
7222045-C-A | 7354004-C-A | ** | ||||||||
18710175-T-C | 16598295-T-C | ** | ||||||||
14316347-C-A | 12195641-C-A | ** | ||||||||
10670953-T-C | ** | |||||||||
56876251-C-A | ** | |||||||||
13466038-G-GGTTT | 11310362-G-GGTTT | ** | ||||||||
13466039-TGCAG-T | 11310363-TGCAG-T | ** | ||||||||
7414275-C-T | 7546234-C-T | ** | ||||||||
27978562-T-TC | 25832415-T-TC | P1_Y2 | ** | |||||||
11017316-C-T | ** | |||||||||
18792788-T-A | 16680908-T-A | ** | ||||||||
11017338-A-T | ** | |||||||||
11017350-A-G | ** | |||||||||
11017359-A-T | ** | |||||||||
11017360-A-G | ** | |||||||||
11017380-G-C | ** | |||||||||
11017391-C-G | ** | |||||||||
18100828-C-A | 15988948-C-A | ** | ||||||||
10801975-C-T | ** | |||||||||
21267843-C-A | 19105957-C-A | ** | ||||||||
10685777-C-A | ** | |||||||||
15776294-C-A | 13664414-C-A | ** | ||||||||
14430621-C-A | 12309894-C-A | ** | ||||||||
15106974-A-G | 12995061-A-G | ** | ||||||||
28707545-C-A | 26561398-C-A | ** | ||||||||
7258624-G-A | 7390583-G-A | ** | ||||||||
18329506-T-TC | 16217626-T-TC | P6_Prx | ** | |||||||
7045699-G-T | 7177658-G-T | ** | ||||||||
13565531-C-A | 11409855-C-A | ** | ||||||||
19391196-C-A | 17279316-C-A | ** | ||||||||
6773315-C-A | 6905274-C-A | ** | ||||||||
22864474-C-A | 20702588-C-A | ** | ||||||||
15392343-C-A | 13280463-C-A | ** | ||||||||
4229223-G-T | 4361182-G-T | ** | ||||||||
4756561-C-A | 4888520-C-A | ** | ||||||||
4087832-C-A | 4219791-C-A | ** | ||||||||
15698634-C-A | 13586754-C-A | ** | ||||||||
10785547-C-A | ** | |||||||||
10799617-CTCCAT-C | ** | |||||||||
16971276-C-A | 14859396-C-A | ** | ||||||||
9385169-C-A | 9547560-C-A | ** | ||||||||
21002537-CT-C | 18840651-CT-C | P4_Dst | ** | |||||||
13463734-T-C | 11308058-T-C | ** | ||||||||
13202730-C-A | 11047054-C-A | ** | ||||||||
18194526-C-A | 16082646-C-A | ** | ||||||||
14502589-C-A | 12390794-C-A | ** | ||||||||
10645960-C-A | ** | |||||||||
8987644-G-T | 9150035-G-T | ** | ||||||||
26204662-A-C | 24058515-A-C | P1_Y1 | ** | |||||||
15753249-C-A | 13641369-C-A | ** | ||||||||
6402330-C-A | 6534289-C-A | ** | ||||||||
17864899-C-A | 15753019-C-A | ** | ||||||||
14425694-C-A | 12304969-C-A | ** | ||||||||
14774294-C-A | 12662363-C-A | ** | ||||||||
16052046-C-A | 13940166-C-A | ** | ||||||||
24629532-T-TA | 22483385-T-TA | P3_t2 | ** | |||||||
28636035-G-T | 26489888-G-T | ** | ||||||||
23141996-G-T | 20980110-G-T | FGC30607 Y8384 | ** | |||||||
14835377-G-T | 12723444-G-T | ** | ||||||||
22011823-C-A | 19849937-C-A | ** | ||||||||
5084239-C-A | 5216198-C-A | ** | ||||||||
13880870-C-A | 11760164-C-A | ** | ||||||||
4271254-C-A | 4403213-C-A | ** | ||||||||
14295278-C-A | 12174572-C-A | ** | ||||||||
16084256-C-A | 13972376-C-A | ** | ||||||||
18443567-G-A | 16331687-G-A | P6_Dst | ** | |||||||
15496801-C-A | 13384921-C-A | ** | ||||||||
19126321-C-A | 17014441-C-A | ** | ||||||||
17301208-C-A | 15189328-C-A | ** | ||||||||
6770554-C-A | 6902513-C-A | ** | ||||||||
4433536-C-A | 4565495-C-A | ** | ||||||||
13217880-C-A | 11062204-C-A | ** | ||||||||
14088815-C-A | 11968109-C-A | ** | ||||||||
17128636-C-A | 15016756-C-A | ** | ||||||||
4502913-A-T | 4634872-A-T | ** | ||||||||
21116786-C-A | 18954900-C-A | ** | ||||||||
16008027-G-T | 13896147-G-T | ** | ||||||||
20569408-G-T | 18407522-G-T | P5_Dst | ** | |||||||
24363689-G-T | 22217542-G-T | ** | ||||||||
24508345-C-A | 22362198-C-A | ** | ||||||||
15177989-C-A | 13066075-C-A | ** | ||||||||
18990349-C-A | 16878469-C-A | ** | ||||||||
9892573-C-A | 10054964-C-A | ** | ||||||||
14180973-A-G | 12060267-A-G | ** | ||||||||
21473731-C-A | 19311845-C-A | ** | ||||||||
15937248-C-A | 13825368-C-A | ** | ||||||||
13463755-C-T | 11308079-C-T | ** | ||||||||
13641041-C-A | 11485365-C-A | ** | ||||||||
13316034-C-A | 11160358-C-A | ** | ||||||||
14428089-C-A | 12307364-C-A | ** | ||||||||
4887907-C-A | 5019866-C-A | ** | ||||||||
9940097-C-T | 10102488-C-T | ** | ||||||||
7038606-C-A | 7170565-C-A | ** | ||||||||
21115583-C-A | 18953697-C-A | ** | ||||||||
9057275-C-A | ** | |||||||||
17889868-C-A | 15777988-C-A | Y100537 | ** | |||||||
18534006-C-A | 16422126-C-A | P6_Dst | ** | |||||||
2665629-G-A | 2797588-G-A | ** | ||||||||
2803333-C-A | 2935292-C-A | ** | ||||||||
2810435-A-ATT | 2942394-A-ATT | 15×T | ** | |||||||
2906615-G-T | 3038574-G-T | ** | ||||||||
2909089-T-C | 3041048-T-C | ** | ||||||||
2977688-G-T | 3109647-G-T | ** | ||||||||
3165150-A-T | 3297109-A-T | ** | ||||||||
3167290-C-T | 3299249-C-T | ** | ||||||||
3192194-G-T | 3324153-G-T | ** | ||||||||
3230010-G-T | 3361969-G-T | ** | ||||||||
3416137-C-A | 3548096-C-A | ** | ||||||||
3557924-G-T | 3689883-G-T | ** | ||||||||
3570121-G-T | 3702080-G-T | ** | ||||||||
3845541-G-T | 3977500-G-T | ** | ||||||||
3986888-T-A | 4118847-T-A | ** | ||||||||
3998678-C-A | 4130637-C-A | ** | ||||||||
4016560-T-C | 4148519-T-C | ** | ||||||||
4036520-C-T | 4168479-C-T | ** | ||||||||
4088537-C-G | 4220496-C-G | ** | ||||||||
4141423-A-G | 4273382-A-G | ** | ||||||||
4190046-C-A | 4322005-C-A | ** | ||||||||
4256873-C-T | 4388832-C-T | ** | ||||||||
4388716-C-A | 4520675-C-A | ** | ||||||||
4404132-C-A | 4536091-C-A | ** | ||||||||
4597016-G-T | 4728975-G-T | ** | ||||||||
4597085-T-C | 4729044-T-C | ** | ||||||||
4626260-T-C | 4758219-T-C | ** | ||||||||
4633186-G-T | 4765145-G-T | ** | ||||||||
4769187-G-A | 4901146-G-A | ** | ||||||||
4789204-C-A | 4921163-C-A | ** | ||||||||
4859781-G-T | 4991740-G-T | ** | ||||||||
4859849-G-T | 4991808-G-T | ** | ||||||||
4957594-C-T | 5089553-C-T | ** | ||||||||
4958298-A-T | 5090257-A-T | ** | ||||||||
4966510-C-A | 5098469-C-A | ** | ||||||||
5059701-C-T | 5191660-C-T | ** | ||||||||
5085238-G-T | 5217197-G-T | ** | ||||||||
5549862-A-T | 5681821-A-T | ** | ||||||||
5549960-G-T | 5681919-G-T | ** | ||||||||
5611128-C-A | 5743087-C-A | ** | ||||||||
5612662-C-A | 5744621-C-A | ** | ||||||||
5796133-A-G | 5928092-A-G | ** | ||||||||
5874482-C-A | 6006441-C-A | ** | ||||||||
5880199-T-C | 6012158-T-C | ** | ||||||||
5924385-C-A | 6056344-C-A | ** | ||||||||
5938929-C-A | 6070888-C-A | FTB85903 | ** | |||||||
5999619-C-A | 6131578-C-A | ** | ||||||||
6048391-G-T | 6180350-G-T | ** | ||||||||
6056442-C-A | 6188401-C-A | ** | ||||||||
6332788-C-A | 6464747-C-A | IR3_Dst | ** | |||||||
6352711-A-G | 6484670-A-G | ** | ||||||||
6413148-G-T | 6545107-G-T | ** | ||||||||
6414481-A-G | 6546440-A-G | ** | ||||||||
6445171-T-G | 6577130-T-G | ** | ||||||||
6461022-T-C | 6592981-T-C | ** | ||||||||
6580068-T-C | 6712027-T-C | ** | ||||||||
6596023-C-A | 6727982-C-A | ** | ||||||||
6688701-C-A | 6820660-C-A | ** | ||||||||
6814541-C-A | 6946500-C-A | FT388114 | ** | |||||||
6821246-C-A | 6953205-C-A | ** | ||||||||
6948139-C-T | 7080098-C-T | ** | ||||||||
7038447-C-A | 7170406-C-A | ** | ||||||||
7048668-G-T | 7180627-G-T | ** | ||||||||
7101458-C-A | 7233417-C-A | ** | ||||||||
7103405-C-A | 7235364-C-A | ** | ||||||||
7154658-A-C | 7286617-A-C | ** | ||||||||
7157154-G-A | 7289113-G-A | ** | ||||||||
7186363-G-T | 7318322-G-T | ** | ||||||||
7208545-C-A | 7340504-C-A | ** | ||||||||
7209129-G-C | 7341088-G-C | ** | ||||||||
7209138-T-A | 7341097-T-A | ** | ||||||||
7209146-G-A | 7341105-G-A | FT73327 | ** | |||||||
7209157-A-C | 7341116-A-C | ** | ||||||||
7243084-C-T | 7375043-C-T | ** | ||||||||
7270063-C-A | 7402022-C-A | ** | ||||||||
7336380-C-A | 7468339-C-A | ** | ||||||||
7345150-G-T | 7477109-G-T | ** | ||||||||
7347811-C-A | 7479770-C-A | ** | ||||||||
7409358-C-A | 7541317-C-A | ** | ||||||||
7418684-C-A | 7550643-C-A | ** | ||||||||
7426257-A-T | 7558216-A-T | ** | ||||||||
7430762-A-T | 7562721-A-T | ** | ||||||||
7434932-C-A | 7566891-C-A | ** | ||||||||
7656662-A-T | 7788621-A-T | ** | ||||||||
7757322-C-A | 7889281-C-A | ** | ||||||||
7860149-A-G | 7992108-A-G | ** | ||||||||
7994199-C-T | 8126158-C-T | ** | ||||||||
8027869-T-C | 8159828-T-C | ** | ||||||||
8385183-C-A | 8517142-C-A | ** | ||||||||
8670009-C-G | 8801968-C-G | ** | ||||||||
8699655-A-G | 8831614-A-G | ** | ||||||||
9109137-A-G | ** | |||||||||
9371589-TA-T | 9533980-TA-T | ** | ||||||||
9371593-C-CAT | 9533984-C-CAT | ** | ||||||||
9427764-G-T | 9590155-G-T | ** | ||||||||
9655555-C-A | 9817946-C-A | IR3_Prx | ** | |||||||
9890960-C-A | 10053351-C-A | ** | ||||||||
9928091-C-A | 10090482-C-A | ** | ||||||||
9990039-C-A | 10152430-C-A | ** | ||||||||
10661503-C-G | ** | |||||||||
10670954-T-G | ** | |||||||||
10670965-C-A | ** | |||||||||
10684649-T-C | ** | |||||||||
10689458-G-A | ** | |||||||||
10773316-C-A | ** | |||||||||
10799560-C-CATTTG | ** | |||||||||
10799656-A-C | ** | |||||||||
10841814-T-C | ** | |||||||||
10872707-C-A | ** | |||||||||
10878353-C-A | ** | |||||||||
10907207-C-A | ** | |||||||||
11004543-T-C | ** | |||||||||
11017369-C-G | ** | |||||||||
13225948-C-T | 11070272-C-T | ** | ||||||||
13228962-C-A | 11073286-C-A | ** | ||||||||
13324178-C-G | 11168502-C-G | ** | ||||||||
13329241-G-A | 11173565-G-A | ** | ||||||||
13446504-G-T | 11290828-G-T | ** | ||||||||
13452725-C-A | 11297049-C-A | ** | ||||||||
13459459-C-A | 11303783-C-A | ** | ||||||||
13465965-G-A | 11310289-G-A | ** | ||||||||
13465988-G-AT | 11310312-G-AT | ** | ||||||||
13468240-C-T | 11312564-C-T | ** | ||||||||
13486433-C-A | 11330757-C-A | ** | ||||||||
11657358-G-T | ** | |||||||||
11659495-T-A | ** | |||||||||
13840680-GGAGT-G | 11719974-GGAGT-G | ** | ||||||||
13939042-T-C | 11818336-T-C | ** | ||||||||
13940771-T-A | 11820065-T-A | ** | ||||||||
13944706-A-T | 11824000-A-T | ** | ||||||||
13970764-G-T | 11850058-G-T | ** | ||||||||
14053540-GA-G | 11932834-GA-G | ** | ||||||||
14152318-C-A | 12031612-C-A | ** | ||||||||
14161835-C-A | 12041129-C-A | ** | ||||||||
14246765-A-G | 12126059-A-G | ** | ||||||||
14324897-T-C | 12204191-T-C | ** | ||||||||
14363515-G-T | 12242810-G-T | ** | ||||||||
14425988-A-C | 12305263-A-C | ** | ||||||||
14462672-C-A | 12341945-C-A | ** | ||||||||
14549629-C-T | 12437830-C-T | ** | ||||||||
14627106-G-A | 12515174-G-A | ** | ||||||||
14695501-C-CA | 12583567-C-CA | 10×A | ** | |||||||
14698347-T-C | 12586413-T-C | ** | ||||||||
14717783-T-A | 12605851-T-A | ** | ||||||||
14718627-C-A | 12606695-C-A | ** | ||||||||
14802750-C-A | 12690821-C-A | ** | ||||||||
15202482-G-A | 13090568-G-A | ** | ||||||||
15290096-T-C | 13178195-T-C | ** | ||||||||
15379956-G-T | 13268076-G-T | ** | ||||||||
15396863-T-C | 13284983-T-C | ** | ||||||||
15404205-T-C | 13292325-T-C | ** | ||||||||
15431877-C-A | 13319997-C-A | ** | ||||||||
15432826-T-C | 13320946-T-C | ** | ||||||||
15444502-C-A | 13332622-C-A | ** | ||||||||
15606828-C-A | 13494948-C-A | ** | ||||||||
15648926-C-A | 13537046-C-A | ** | ||||||||
15649983-A-G | 13538103-A-G | ** | ||||||||
15733030-C-A | 13621150-C-A | ** | ||||||||
15808897-G-T | 13697017-G-T | ** | ||||||||
15922418-C-A | 13810538-C-A | ** | ||||||||
15927037-A-G | 13815157-A-G | FT207319 | ** | |||||||
15943722-G-T | 13831842-G-T | ** | ||||||||
16184061-A-T | 14072181-A-T | ** | ||||||||
16213991-C-T | 14102111-C-T | ** | ||||||||
16272320-G-T | 14160440-G-T | ** | ||||||||
16317093-C-A | 14205213-C-A | ** | ||||||||
16424145-C-A | 14312265-C-A | ** | ||||||||
16450252-C-T | 14338372-C-T | ** | ||||||||
16604495-C-A | 14492615-C-A | ** | ||||||||
16881497-G-C | 14769617-G-C | ** | ||||||||
16938452-C-A | 14826572-C-A | ** | ||||||||
17095387-C-A | 14983507-C-A | ** | ||||||||
17098966-C-T | 14987086-C-T | BZ2233 | ** | |||||||
17217421-A-T | 15105541-A-T | ** | ||||||||
17244334-A-G | 15132454-A-G | ** | ||||||||
17466443-C-A | 15354563-C-A | ** | ||||||||
17474682-C-A | 15362802-C-A | ** | ||||||||
17535389-T-C | 15423509-T-C | ** | ||||||||
17605489-C-A | 15493609-C-A | ** | ||||||||
18147538-G-TTTT | 16035658-G-TTTT | ** | ||||||||
18340620-G-A | 16228740-G-A | P6_Prx | ** | |||||||
18491470-G-T | 16379590-G-T | P6_Dst | ** | |||||||
18701685-C-A | 16589805-C-A | ** | ||||||||
18754827-A-G | 16642947-A-G | ** | ||||||||
18853504-G-T | 16741624-G-T | ** | ||||||||
18948032-T-C | 16836152-T-C | ** | ||||||||
19019874-C-A | 16907994-C-A | ** | ||||||||
19079278-C-A | 16967398-C-A | FT305893 | ** | |||||||
19184553-C-A | 17072673-C-A | FT88130 | ** | |||||||
19498124-C-A | 17386244-C-A | ** | ||||||||
19527220-C-A | 17415340-C-A | ** | ||||||||
19604918-A-T | 17493038-A-T | P5_Prx | ** | |||||||
19604950-G-T | 17493070-G-T | P5_Prx | ** | |||||||
20807083-T-A | 18645197-T-A | P4_Gap | ** | |||||||
21088781-GC-G | 18926895-GC-G | ** | ||||||||
21109881-G-C | 18947995-G-C | ** | ||||||||
21201215-C-A | 19039329-C-A | ** | ||||||||
21409070-G-T | 19247184-G-T | ** | ||||||||
21438311-C-A | 19276425-C-A | ** | ||||||||
21522211-A-T | 19360325-A-T | ** | ||||||||
21522254-G-T | 19360368-G-T | ** | ||||||||
21544012-T-G | 19382126-T-G | ** | ||||||||
21737823-T-A | 19575937-T-A | ** | ||||||||
21813728-C-A | 19651842-C-A | ** | ||||||||
22128612-C-A | 19966726-C-A | ** | ||||||||
22425701-G-C | 20263815-G-C | DYZ19 | ** | |||||||
22614197-G-A | 20452311-G-A | ** | ||||||||
22842388-ATGGCAC-A | 20680502-ATGGCAC-A | ** | ||||||||
22962008-GTTTTTT-G | 20800122-GTTTTTT-G | 27×T | ** | |||||||
23185423-C-A | 21023537-C-A | ** | ||||||||
23201479-G-T | 21039593-G-T | ** | ||||||||
23259209-C-A | 21097323-C-A | ** | ||||||||
23345510-C-A | 21183624-C-A | ** | ||||||||
23420640-C-A | 21258754-C-A | ** | ||||||||
24003105-C-A | 21856958-C-A | ** | ||||||||
24235417-G-GAA | 22089270-G-GAA | P3_b1 | ** | |||||||
24363807-T-C | 22217660-T-C | ** | ||||||||
24404213-C-A | 22258066-C-A | ** | ||||||||
24673047-G-T | 22526900-G-T | P3_b2 | ** | |||||||
26041891-C-A | 23895744-C-A | P1_Y1 | ** | |||||||
26440647-G-T | 24294500-G-T | P1_Y1 | ** | |||||||
27838299-C-G | 25692152-C-G | P1_Y2 | ** | |||||||
28484981-C-T | 26338834-C-T | ** | ||||||||
28526964-T-C | 26380817-T-C | ** | ||||||||
28575115-C-A | 26428968-C-A | ** | ||||||||
28594207-T-C | 26448060-T-C | ** | ||||||||
28620813-C-A | 26474666-C-A | ** | ||||||||
28626101-C-A | 26479954-C-A | ** | ||||||||
28643557-T-C | 26497410-T-C | ** | ||||||||
28726833-C-A | 26580686-C-A | ** | ||||||||
28769263-G-A | 26623116-G-A | ** | ||||||||
28781635-C-A | 26635488-C-A | ** | ||||||||
56699835-G-A | ** | |||||||||
56835933-C-A | ** | |||||||||
56861649-C-T | ** | |||||||||
25994015-CAAAA-C | 23847868-CAAAA-C | P1_Y1 | 14×A | ** | ||||||
10604234-A-G | ** | |||||||||
13481799-C-T | 11326123-C-T | ** | ||||||||
14119205-G-A | 11998499-G-A | ** | ||||||||
15890865-T-C | 13778985-T-C | ** | ||||||||
16945201-C-T | 14833321-C-T | ** | ||||||||
17061178-A-G | 14949298-A-G | ** | ||||||||
19932018-T-C | 17820138-T-C | P5_Prx | ** | |||||||
21002530-T-C | 18840644-T-C | P4_Dst | ** | |||||||
22193740-A-G | 20031854-A-G | ** | ||||||||
24241109-G-A | 22094962-G-A | P3_b1 | ** | |||||||
25617287-G-T | 23471140-G-T | P1_gr1 | ** | |||||||
14025562-A-AAAAGAAAG | 11904856-A-AAAAGAAAG | 12×AAAG | *** | |||||||
13744209-A-G | 11588533-A-G | *** | ||||||||
58977390-G-C | 56831243-G-C | *** | ||||||||
13478967-G-A | 11323291-G-A | *** | ||||||||
58977391-A-C | 56831244-A-C | *** | ||||||||
3252831-G-A | 3384790-G-A | *** | ||||||||
13808515-A-C | 11687809-A-C | *** | ||||||||
3015575-T-TAC | 3147534-T-TAC | 17×AC | *** | |||||||
13833720-T-C | 11713014-T-C | *** | ||||||||
22454622-G-C | 20292736-G-C | DYZ19 | *** | |||||||
23196336-C-A | 21034450-C-A | PF1894 CTS11622 | *** | *** | ||||||
24216568-A-G | 22070421-A-G | P3_b1 | *** | |||||||
22894151-G-A | 20732265-G-A | 28×A | *** | |||||||
13463823-C-T | 11308147-C-T | *** | ||||||||
16627726-G-GTA | 14515846-G-GTA | 10×TA | *** | |||||||
23300266-G-GA | 21138380-G-GA | 10×A | *** | |||||||
17527438-GTATA-G | 15415558-GTATA-G | 18×TA | *** | |||||||
15106356-T-TA | 12994444-T-TA | 10×A | *** | |||||||
22205320-T-TA | 20043434-T-TA | 9×A | *** | |||||||
25201103-G-A | 23054956-G-A | ZS7956 | g1 | *** | ||||||
13457815-C-T | 11302139-C-T | *** | ||||||||
18763554-GTGTA-G | 16651674-GTGTA-G | 6×TGTA | *** | |||||||
13488838-C-A | 11333162-C-A | *** | ||||||||
13488292-C-T | 11332616-C-T | *** | ||||||||
13808508-T-A | 11687802-T-A | *** | ||||||||
13456988-G-A | 11301312-G-A | *** | ||||||||
13487462-T-G | 11331786-T-G | *** | ||||||||
8403272-CAA-C | 8535231-CAA-C | 28×A | *** | |||||||
23747205-CTTT-C | 21585319-CTTT-C | 29×T | *** | |||||||
16749740-TTG-T | 14637860-TTG-T | 12×TG | *** | |||||||
19337633-CTTTT-C | 17225753-CTTTT-C | 22×T | *** | |||||||
19047817-C-CGT | 16935937-C-CGT | 16×GT | *** | |||||||
14657601-G-GA | 12545666-G-GA | 10×A | *** | |||||||
56831393-C-CCACTCCATTT,CCACTTCATTT | *** | |||||||||
24278185-A-AGAAAGAAG,AGAAAGAAGGAAA | 22132038-A-AGAAAGAAG,AGAAAGAAGGAAA | P3_b1 | *** | |||||||
2855305-CTTT-C | 2987264-CTTT-C | 16×T | *** | |||||||
10934772-C-T | *** | |||||||||
6630512-CTTTT-C | 6762471-CTTTT-C | 15×T | *** | |||||||
10889287-C-T | *** | |||||||||
10889288-C-A | *** | |||||||||
13466051-T-A | 11310375-T-A | *** | ||||||||
19091406-GTT-G | 16979526-GTT-G | 14×T | *** | |||||||
18106353-GTT-G | 15994473-GTT-G | 15×T | *** | |||||||
13489629-CCACCCA-C,CCATCCCA | 11333953-CCACCCA-C,CCATCCCA | *** | ||||||||
10796671-C-G | *** | |||||||||
10986883-A-G | *** | |||||||||
13477475-A-G | 11321799-A-G | *** | ||||||||
13453692-C-T | 11298016-C-T | *** | ||||||||
10789360-C-G | *** | |||||||||
10986872-C-G,T | *** | |||||||||
8354178-TAAA-T | 8486137-TAAA-T | 14×A | *** | |||||||
10987790-A-T | *** | |||||||||
13488859-C-T | 11333183-C-T | *** | ||||||||
13488797-G-T | 11333121-G-T | *** | ||||||||
4244622-ATTT-A | 4376581-ATTT-A | 16×T | *** | |||||||
23648241-G-T | 21486355-G-T | *** | ||||||||
2762705-CTTTTT-C | 2894664-CTTTTT-C | 16×T | *** | |||||||
4788057-TA-T | 4920016-TA-T | 11×A | *** | |||||||
14562386-T-G | 12450586-T-G | *** | ||||||||
13485899-A-T | 11330223-A-T | *** | ||||||||
8568465-GTTTTT-G | 8700424-GTTTTT-G | 22×T | *** | |||||||
27399126-G-T | 25252979-G-T | P1_g3 | *** | |||||||
10796651-C-A | *** | |||||||||
21092191-CTT-C,CT | 18930305-CTT-C,CT | 18×T | *** | |||||||
13485908-T-C | 11330232-T-C | *** | ||||||||
10956594-C-CGGAAG,CGGATG | *** | |||||||||
10889303-C-GTGTTT | *** | |||||||||
9944037-G-T | 10106428-G-T | *** | ||||||||
10818940-G-A | *** | |||||||||
13808516-G-A | 11687810-G-A | *** | ||||||||
13808519-T-A | 11687813-T-A | *** | ||||||||
56835426-C-A,T | *** | |||||||||
21663262-TAAAA-T,TAAA | 19501376-TAAAA-T,TAAA | 15×A | *** | |||||||
13488276-C-G | 11332600-C-G | *** | ||||||||
16648115-GTTT-G | 14536235-GTTT-G | 29×T | *** | |||||||
2752698-C-A | 2884657-C-A | *** | ||||||||
7020319-C-A | 7152278-C-A | *** | ||||||||
56830292-C-A | *** | |||||||||
10755400-TTCATT-T,TTCATC | *** | |||||||||
56861838-AC-A | *** | |||||||||
13704934-C-G | 11549258-C-G | *** | ||||||||
2840069-C-A | 2972028-C-A | *** | ||||||||
5189977-T-A | 5321936-T-A | *** | ||||||||
7098902-TAAAAAA-T,TAAAAA | 7230861-TAAAAAA-T,TAAAAA | 16×A | *** | |||||||
7377371-G-T | 7509330-G-T | *** | ||||||||
7699784-C-A | 7831743-C-A | *** | ||||||||
8344065-C-A | 8476024-C-A | *** | ||||||||
9047755-A-C | 9210146-A-C | FTB75755 | *** | |||||||
9498927-T-C | 9661318-T-C | *** | ||||||||
9858038-C-A | 10020429-C-A | *** | ||||||||
10016838-C-A | 10179229-C-A | *** | ||||||||
10647779-C-A | *** | |||||||||
10744568-C-A | *** | |||||||||
10801651-C-A | *** | |||||||||
10818967-A-G | *** | |||||||||
10987259-C-A | *** | |||||||||
13311168-C-A | 11155492-C-A | *** | ||||||||
13324564-C-A | 11168888-C-A | *** | ||||||||
13404592-C-A | 11248916-C-A | *** | ||||||||
13434543-A-G | 11278867-A-G | *** | ||||||||
13474346-C-A | 11318670-C-A | *** | ||||||||
13482857-G-A | 11327181-G-A | *** | ||||||||
14626350-C-A | 12514418-C-A | *** | ||||||||
15392620-C-G | 13280740-C-G | *** | ||||||||
15635880-GA-G | 13524000-GA-G | *** | ||||||||
15767300-C-A | 13655420-C-A | *** | ||||||||
16970350-C-A | 14858470-C-A | *** | ||||||||
17251118-G-T | 15139238-G-T | *** | ||||||||
17363391-C-A | 15251511-C-A | *** | ||||||||
17414908-CAAAAAA-C | 15303028-CAAAAAA-C | 18×A | *** | |||||||
21235227-CAA-C,CA | 19073341-CAA-C,CA | 19×A | *** | |||||||
21402441-C-A | 19240555-C-A | *** | ||||||||
23350676-C-G | 21188790-C-G | *** | ||||||||
24402478-T-C | 22256331-T-C | *** | ||||||||
28485687-A-G | 26339540-A-G | *** | ||||||||
56830308-C-A | *** | |||||||||
15272028-CTATATA-C | 13160117-CTATATA-C | 11×TA | *** | |||||||
21992963-TAAAAAA-T,TAAAA | 19831077-TAAAAAA-T,TAAAA | 23×A | *** | |||||||
4932741-G-A | 5064700-G-A | *** | ||||||||
18943093-A-G | 16831213-A-G | *** | ||||||||
18943094-C-T | 16831214-C-T | *** | ||||||||
6068017-CT-C | 6199976-CT-C | 10×T | *** | |||||||
4067508-CTTTT-C,CTTT | 4199467-CTTTT-C,CTTT | 29×T | *** | |||||||
5305775-A-T | 5437734-A-T | *** | ||||||||
6089764-GTTTT-G,GTTT | 6221723-GTTTT-G,GTTT | 31×T | *** | |||||||
13429435-G-C | 11273759-G-C | *** | ||||||||
13466371-T-G | 11310695-T-G | *** | ||||||||
13535625-A-G | 11379949-A-G | *** | ||||||||
14243719-TTGTG-T,TTG | 12123013-TTGTG-T,TTG | 15×TG | *** | |||||||
12374566-T-A | *** | |||||||||
16095621-A-G | 13983741-A-G | *** | ||||||||
20819998-CTT-C,CT | 18658112-CTT-C,CT | P4_Gap | 21×T | *** | ||||||
26730255-A-T | 24584108-A-T | P1_g2 | *** | |||||||
28600906-A-T | 26454759-A-T | *** | ||||||||
56862643-G-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.