Drummond
FTDNA: 171834, BigY2: 171834Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 171834 | BigY2 171834 |
---|---|---|---|---|---|---|---|---|---|
8070115-G-A | 8202074-G-A | Y10955 FGC7943 ZS4957 | Y | Y | + | + | |||
8359977-C-G | 8491936-C-G | BY71980 | Y | Y | + | + | |||
21052835-G-A | 18890949-G-A | BY11242 | Y | Y | + | + | |||
23153585-A-G | 20991699-A-G | BY143422 | Y | Y | + | + | |||
15358761-G-GAA | 13246880-G-GA | 26×A | ** | ||||||
7009185-TTC-T | 7141144-TTC-T | ** | |||||||
16250669-C-T | 14138789-C-T | ** | |||||||
14076164-A-G | 11955458-A-G | ** | |||||||
9369169-A-T | 9531560-A-T | ** | |||||||
25899735-T-G | 23753588-T-G | P1_Y1 | ** | ||||||
13961473-C-A | 11840767-C-A | ** | |||||||
28480658-C-A | 26334511-C-A | ** | |||||||
28661676-T-C | 26515529-T-C | CTS12663 | ** | ** | |||||
13461084-T-G | 11305408-T-G | ** | |||||||
6901307-C-A | 7033266-C-A | ** | |||||||
19187417-C-T | 17075537-C-T | ** | |||||||
23448041-C-A | 21286155-C-A | ** | |||||||
15679892-C-A | 13568012-C-A | FT117180 | ** | ||||||
19250714-A-T | 17138834-A-T | ** | |||||||
10935624-T-TTCCAA | ** | ||||||||
7107084-ATT-A | 7239043-ATT-A | 14×T | ** | ||||||
14331155-TTGC-T | 12210449-TTGC-T | ** | |||||||
3818121-C-A | 3950080-C-A | ** | |||||||
19129053-CTTTTT-C | 17017173-CTTTTT-C | 16×T | ** | ||||||
15352883-C-A | 13241002-C-A | ** | |||||||
15894414-T-C | 13782534-T-C | ** | |||||||
11036084-A-G | ** | ||||||||
16045054-ATT-A | 13933174-ATT-A | 13×T | ** | ||||||
13336278-G-T | 11180602-G-T | ** | |||||||
11036042-T-C | ** | ||||||||
20325901-G-T | 18164015-G-T | P5_Dst | ** | ||||||
11036085-C-A | ** | ||||||||
56825740-CATATATATATAT-C | 12×AT | ** | |||||||
15446934-C-A | 13335054-C-A | ** | |||||||
13461093-C-G | 11305417-C-G | ** | |||||||
28708286-C-A | 26562139-C-A | ** | |||||||
11036118-T-A | ** | ||||||||
11036132-C-CTCCAA | ** | ||||||||
11036141-AT-A | ** | ||||||||
6444836-CTATATA-C | 6576795-CTATATA-C | 12×TA | ** | ||||||
15735521-C-A | 13623641-C-A | ** | |||||||
26500422-C-A | 24354275-C-A | P1_Y1 | ** | ||||||
10683128-C-T | ** | ||||||||
10666950-A-T | ** | ||||||||
4416881-AAAA-C | 4548840-AAAA-C | ** | |||||||
14390026-C-A | 12269322-C-A | ** | |||||||
10751143-C-A | ** | ||||||||
21054379-CAAA-C | 18892493-CAAA-C | 18×A | ** | ||||||
2745876-GAA-G | 2877835-GAA-G | 14×A | ** | ||||||
21912175-C-A | 19750289-C-A | ** | |||||||
5863111-AT-A | 5995070-AT-A | 9×T | ** | ||||||
13466278-C-A | 11310602-C-A | ** | |||||||
13854495-C-A | 11733789-C-A | ** | |||||||
19992570-A-AT | 17880690-A-AT | P5_Prx | 9×T | ** | |||||
5247484-C-A | 5379443-C-A | ** | |||||||
28587252-C-A | 26441105-C-A | ** | |||||||
13461024-C-T | 11305348-C-T | ** | |||||||
13461045-A-T | 11305369-A-T | ** | |||||||
13461075-A-T | 11305399-A-T | ** | |||||||
10895839-T-C | ** | ||||||||
3815165-G-T | 3947124-G-T | ** | |||||||
15423473-TCA-T | 13311593-TCA-T | ** | |||||||
10895852-A-T | ** | ||||||||
10944494-C-A | ** | ||||||||
15131747-C-A | 13019834-C-A | ** | |||||||
18930591-C-A | 16818711-C-A | ** | |||||||
14380206-A-AT | 12259502-A-AT | 10×T | ** | ||||||
11020219-A-G | ** | ||||||||
10745207-C-A | ** | ||||||||
4426105-C-A | 4558064-C-A | ** | |||||||
23276618-C-A | 21114732-C-A | ** | |||||||
2855467-A-T | 2987426-A-T | 16×T | ** | ||||||
23188612-C-A | 21026726-C-A | ** | |||||||
16170242-C-A | 14058362-C-A | ** | |||||||
17250104-G-T | 15138224-G-T | ** | |||||||
23832996-C-A | 21671110-C-A | ** | |||||||
15899064-TAA-T | 13787184-TAA-T | 11×A | ** | ||||||
3250661-C-A | 3382620-C-A | ** | |||||||
15909418-C-A | 13797538-C-A | ** | |||||||
11027111-A-C | ** | ||||||||
22023236-C-A | 19861350-C-A | ** | |||||||
9057228-C-A | ** | ||||||||
2833234-C-A | 2965193-C-A | ** | |||||||
10786862-C-A | ** | ||||||||
17048155-C-A | 14936275-C-A | ** | |||||||
19416511-C-A | 17304631-C-A | ** | |||||||
10786381-C-T | ** | ||||||||
10786428-T-A | ** | ||||||||
10786429-T-C | ** | ||||||||
10786448-T-C | ** | ||||||||
10786451-C-T | ** | ||||||||
15921259-C-A | 13809379-C-A | ** | |||||||
18630751-C-A | 16518871-C-A | ** | |||||||
21118673-C-A | 18956787-C-A | ** | |||||||
10958828-T-C | ** | ||||||||
5170492-C-A | 5302451-C-A | ** | |||||||
18190455-C-A | 16078575-C-A | ** | |||||||
7038601-C-A | 7170560-C-A | ** | |||||||
10941985-G-T | ** | ||||||||
15619435-C-A | 13507555-C-A | ** | |||||||
25964916-T-C | 23818769-T-C | P1_Y1 | ** | ||||||
14077066-C-A | 11956360-C-A | ** | |||||||
14799825-C-A | 12687896-C-A | ** | |||||||
13927409-C-A | 11806703-C-A | ** | |||||||
10750731-G-T | ** | ||||||||
16246191-C-A | 14134311-C-A | ** | |||||||
15556056-C-A | 13444176-C-A | ** | |||||||
13998130-A-G | 11877424-A-G | ** | |||||||
28518912-C-A | 26372765-C-A | ** | |||||||
28727852-C-A | 26581705-C-A | ** | |||||||
28592150-C-A | 26446003-C-A | ** | |||||||
6028268-C-A | 6160227-C-A | ** | |||||||
26098025-AG-A | 23951878-AG-A | P1_Y1 | ** | ||||||
10773320-C-A | ** | ||||||||
10825216-A-G | ** | ||||||||
15332326-C-A | 13220444-C-A | ** | |||||||
10969458-G-A | ** | ||||||||
8408476-C-A | 8540435-C-A | ** | |||||||
15918613-C-A | 13806733-C-A | ** | |||||||
6402952-C-A | 6534911-C-A | ** | |||||||
26067555-T-A | 23921408-T-A | P1_Y1 | ** | ||||||
5393274-A-G | 5525233-A-G | ** | |||||||
3961527-C-A | 4093486-C-A | ** | |||||||
15557176-C-A | 13445296-C-A | ** | |||||||
21410102-C-A | 19248216-C-A | ** | |||||||
11016053-G-T | ** | ||||||||
14610567-TC-T | 12498769-TC-T | ** | |||||||
9514934-C-A | 9677325-C-A | ** | |||||||
21054407-C-A | 18892521-C-A | ** | |||||||
14458057-C-A | 12337330-C-A | ** | |||||||
5800509-C-A | 5932468-C-A | ** | |||||||
9927280-C-A | 10089671-C-A | ** | |||||||
10683117-G-T | ** | ||||||||
10693681-C-A | ** | ||||||||
21447852-C-A | 19285966-C-A | ** | |||||||
10884722-C-A | ** | ||||||||
11676125-C-A | ** | ||||||||
11030086-C-T | ** | ||||||||
17511722-C-A | 15399842-C-A | FT330438 | ** | ||||||
9702910-G-A | 9865301-G-A | IR3_Prx | ** | ||||||
10765559-G-T | ** | ||||||||
23468604-C-A | 21306718-C-A | ** | |||||||
22776971-C-A | 20615085-C-A | ** | |||||||
2699592-G-A | 2831551-G-A | FTB6130 | ** | ||||||
2708080-G-T | 2840039-G-T | ** | |||||||
2759516-C-G | 2891475-C-G | ** | |||||||
2759602-C-G | 2891561-C-G | ** | |||||||
2784262-G-T | 2916221-G-T | ** | |||||||
2790323-C-A | 2922282-C-A | ** | |||||||
2916487-G-T | 3048446-G-T | ** | |||||||
2974033-T-A | 3105992-T-A | ** | |||||||
3048246-C-A | 3180205-C-A | ** | |||||||
3227487-A-G | 3359446-A-G | ** | |||||||
3250696-C-T | 3382655-C-T | 14×T | ** | ||||||
3268210-C-A | 3400169-C-A | ** | |||||||
3279829-A-T | 3411788-A-T | ** | |||||||
3332478-C-A | 3464437-C-A | ** | |||||||
3418585-C-A | 3550544-C-A | ** | |||||||
3501870-G-T | 3633829-G-T | ** | |||||||
3517578-G-T | 3649537-G-T | ** | |||||||
3535678-C-A | 3667637-C-A | ** | |||||||
3617580-G-T | 3749539-G-T | ** | |||||||
3618909-G-T | 3750868-G-T | ** | |||||||
3620305-T-G | 3752264-T-G | ** | |||||||
3620371-A-G | 3752330-A-G | ** | |||||||
3620796-C-A | 3752755-C-A | ** | |||||||
3721307-C-A | 3853266-C-A | ** | |||||||
3804501-T-A | 3936460-T-A | ** | |||||||
3855489-G-T | 3987448-G-T | ** | |||||||
3896159-G-T | 4028118-G-T | ** | |||||||
3922891-C-A | 4054850-C-A | ** | |||||||
3951477-C-T | 4083436-C-T | ** | |||||||
3960939-G-A | 4092898-G-A | ** | |||||||
4087706-C-A | 4219665-C-A | ** | |||||||
4103218-C-G | 4235177-C-G | ** | |||||||
4111277-T-G | 4243236-T-G | ** | |||||||
4252030-C-A | 4383989-C-A | ** | |||||||
4255623-T-C | 4387582-T-C | ** | |||||||
4281962-C-A | 4413921-C-A | ** | |||||||
4308514-G-T | 4440473-G-T | ** | |||||||
4416817-G-T | 4548776-G-T | ** | |||||||
4439265-T-C | 4571224-T-C | ** | |||||||
4446047-T-G | 4578006-T-G | ** | |||||||
4468151-C-CA | 4600110-C-CA | 8×A | ** | ||||||
4540055-T-A | 4672014-T-A | ** | |||||||
4575905-C-G | 4707864-C-G | ** | |||||||
4604377-A-G | 4736336-A-G | ** | |||||||
4627049-C-A | 4759008-C-A | ** | |||||||
4630761-G-T | 4762720-G-T | ** | |||||||
4701475-G-T | 4833434-G-T | ** | |||||||
4764216-G-T | 4896175-G-T | ** | |||||||
4764260-CA-C | 4896219-CA-C | ** | |||||||
4769130-C-G | 4901089-C-G | ** | |||||||
4950865-C-A | 5082824-C-A | ** | |||||||
5021042-G-T | 5153001-G-T | ** | |||||||
5062473-C-A | 5194432-C-A | 21×A | ** | ||||||
5170369-G-A | 5302328-G-A | ** | |||||||
5214017-T-A | 5345976-T-A | ** | |||||||
5226570-C-G | 5358529-C-G | ** | |||||||
5231323-A-G | 5363282-A-G | ** | |||||||
5243639-T-C | 5375598-T-C | ** | |||||||
5295447-A-AT | 5427406-A-AT | 10×T | ** | ||||||
5295549-C-T | 5427508-C-T | ** | |||||||
5443412-T-G | 5575371-T-G | ** | |||||||
5454583-C-A | 5586542-C-A | ** | |||||||
5501057-G-T | 5633016-G-T | ** | |||||||
5505770-T-C | 5637729-T-C | ** | |||||||
5534778-CCT-C | 5666737-CCT-C | ** | |||||||
5612745-C-A | 5744704-C-A | ** | |||||||
5679968-C-A | 5811927-C-A | ** | |||||||
5733858-C-A | 5865817-C-A | ** | |||||||
5812326-C-A | 5944285-C-A | ** | |||||||
5916517-A-T | 6048476-A-T | ** | |||||||
5927386-A-G | 6059345-A-G | ** | |||||||
6354252-C-A | 6486211-C-A | ** | |||||||
6417914-G-T | 6549873-G-T | ** | |||||||
6446152-T-A | 6578111-T-A | ** | |||||||
6476736-C-A | 6608695-C-A | ** | |||||||
6479419-C-A | 6611378-C-A | ** | |||||||
6519262-A-G | 6651221-A-G | ** | |||||||
6519317-A-G | 6651276-A-G | ** | |||||||
6519338-AT-A | 6651297-AT-A | ** | |||||||
6578038-G-T | 6709997-G-T | ** | |||||||
6579733-A-G | 6711692-A-G | ** | |||||||
6644894-C-A | 6776853-C-A | ** | |||||||
6918357-T-C | 7050316-T-C | ** | |||||||
7028028-C-A | 7159987-C-A | ** | |||||||
7102501-C-A | 7234460-C-A | ** | |||||||
7156960-T-C | 7288919-T-C | ** | |||||||
7159195-C-A | 7291154-C-A | ** | |||||||
7165378-C-A | 7297337-C-A | ** | |||||||
7243278-G-A | 7375237-G-A | ** | |||||||
7255004-G-T | 7386963-G-T | ** | |||||||
7258957-A-T | 7390916-A-T | ** | |||||||
7264589-T-C | 7396548-T-C | ** | |||||||
7275072-C-A | 7407031-C-A | ** | |||||||
7287059-C-A | 7419018-C-A | ** | |||||||
7311519-C-G | 7443478-C-G | ** | |||||||
7311649-C-A | 7443608-C-A | ** | |||||||
7417561-CTTTT-C | 7549520-CTTTT-C | 14×T | ** | ||||||
7430749-G-T | 7562708-G-T | ** | |||||||
7446344-CT-C | 7578303-CT-C | ** | |||||||
7650363-C-A | 7782322-C-A | ** | |||||||
7918408-C-A | 8050367-C-A | ** | |||||||
7969972-C-A | 8101931-C-A | ** | |||||||
8063962-C-T | 8195921-C-T | ** | |||||||
8159067-C-A | 8291026-C-A | ** | |||||||
8166986-C-A | 8298945-C-A | ** | |||||||
8674028-C-A | 8805987-C-A | ** | |||||||
8678163-C-A | 8810122-C-A | ** | |||||||
8736373-C-A | 8868332-C-A | ** | |||||||
8851105-C-A | 8983064-C-A | ** | |||||||
8913535-G-T | 9045494-G-T | ** | |||||||
9034499-C-A | 9196890-C-A | ** | |||||||
9079315-T-A | 9241706-T-A | ** | |||||||
9223120-T-C | 9385511-T-C | ** | |||||||
9461780-C-A | 9624171-C-A | ** | |||||||
9511546-C-T | 9673937-C-T | ** | |||||||
9605326-T-TGC | 9767717-T-TGC | IR3_Prx | ** | ||||||
9940192-C-A | 10102583-C-A | ** | |||||||
9942135-C-A | 10104526-C-A | ** | |||||||
9959087-A-T | 10121478-A-T | ** | |||||||
9959218-A-G | 10121609-A-G | ** | |||||||
9963424-A-G | 10125815-A-G | ** | |||||||
10005947-A-G | 10168338-A-G | ** | |||||||
10032877-C-T | 10195268-C-T | ** | |||||||
10051236-T-C | 10213627-T-C | ** | |||||||
10658639-A-C | ** | ||||||||
10660741-TTTCCATTCCATTCCATTCCATTCCATTCCA-T | ** | ||||||||
10661109-C-A | ** | ||||||||
10745369-C-A | ** | ||||||||
10754273-TC-T | ** | ||||||||
10762229-C-A | ** | ||||||||
10775576-G-T | ** | ||||||||
10778015-C-T | ** | ||||||||
10779414-ACTCC-A | ** | ||||||||
10803868-C-A | ** | ||||||||
10803932-A-G | ** | ||||||||
10823681-G-T | ** | ||||||||
10824279-C-A | ** | ||||||||
10833838-T-C | ** | ||||||||
10835782-C-T | FT433383 | ** | |||||||
10841592-C-A | ** | ||||||||
10843576-C-T | ** | ||||||||
10868191-C-A | ** | ||||||||
10880504-C-A | ** | ||||||||
10918196-G-T | ** | ||||||||
10920807-C-A | ** | ||||||||
10926116-C-A | ** | ||||||||
10942246-T-C | ** | ||||||||
10946372-T-C | ** | ||||||||
10950896-C-T | ** | ||||||||
10951108-C-A | ** | ||||||||
10954731-C-A | ** | ||||||||
10954834-T-C | ** | ||||||||
10969437-C-G | ** | ||||||||
10978317-G-T | ** | ||||||||
10980843-C-A | ** | ||||||||
10984363-C-A | ** | ||||||||
10985498-C-A | ** | ||||||||
10986309-C-A | ** | ||||||||
10992087-C-A | ** | ||||||||
10997456-C-A | ** | ||||||||
11009665-G-T | ** | ||||||||
11010067-C-A | ** | ||||||||
11014140-G-T | ** | ||||||||
11015194-C-A | ** | ||||||||
11037927-C-A | ** | ||||||||
13310953-C-A | 11155277-C-A | ** | |||||||
13361477-T-C | 11205801-T-C | ** | |||||||
13484671-C-A | 11328995-C-A | ** | |||||||
13507664-C-A | 11351988-C-A | ** | |||||||
13594825-T-C | 11439149-T-C | ** | |||||||
13598596-T-C | 11442920-T-C | ** | |||||||
13621908-G-T | 11466232-G-T | ** | |||||||
11663570-T-C | ** | ||||||||
13879677-C-A | 11758971-C-A | ** | |||||||
13879768-C-A | 11759062-C-A | ** | |||||||
13895967-C-A | 11775261-C-A | ** | |||||||
13902969-C-A | 11782263-C-A | ** | |||||||
13938730-G-A | 11818024-G-A | FT198569 | ** | ||||||
13940831-C-A | 11820125-C-A | ** | |||||||
13941052-G-T | 11820346-G-T | FT380508 | ** | ||||||
13949590-TCA-T | 11828884-TCA-T | ** | |||||||
13953276-C-G | 11832570-C-G | ** | |||||||
13981681-C-A | 11860975-C-A | ** | |||||||
13994724-A-C | 11874018-A-C | ** | |||||||
13997767-G-T | 11877061-G-T | ** | |||||||
14025690-G-A | 11904984-G-A | ** | |||||||
14025678-GAAGGAAGGAAGGAAGA-G | 11904972-GAAGGAAGGAAGGAAGA-G | ** | |||||||
14041169-G-T | 11920463-G-T | ** | |||||||
14136051-C-A | 12015345-C-A | ** | |||||||
14168208-C-A | 12047502-C-A | ** | |||||||
14303047-C-A | 12182341-C-A | ** | |||||||
14345036-T-C | 12224331-T-C | ** | |||||||
14427294-C-A | 12306569-C-A | ** | |||||||
14428211-C-A | 12307486-C-A | ** | |||||||
14436527-G-T | 12315800-G-T | ** | |||||||
14473058-C-A | 12352327-C-A | ** | |||||||
14473153-G-A | 12352422-G-A | ** | |||||||
14474742-C-A | 12354011-C-A | ** | |||||||
14505447-G-T | 12393652-G-T | ** | |||||||
14532090-A-G | 12420291-A-G | ** | |||||||
14557727-G-T | 12445928-G-T | ** | |||||||
14585996-G-T | 12474196-G-T | ** | |||||||
14614838-C-A | 12503036-C-A | ** | |||||||
14620308-G-T | 12508506-G-T | ** | |||||||
14624412-C-A | 12512612-C-A | ** | |||||||
14788184-C-A | 12676255-C-A | ** | |||||||
14831857-C-T | 12719924-C-T | ** | |||||||
14858766-C-A | 12746832-C-A | ** | |||||||
14965106-T-G | 12853181-T-G | ** | |||||||
15424427-G-T | 13312547-G-T | ** | |||||||
15432788-TG-T | 13320908-TG-T | ** | |||||||
15576830-C-A | 13464950-C-A | ** | |||||||
15593271-T-A | 13481391-T-A | ** | |||||||
15679921-T-C | 13568041-T-C | ** | |||||||
15785916-C-A | 13674036-C-A | ** | |||||||
15882603-C-A | 13770723-C-A | ** | |||||||
15963700-G-T | 13851820-G-T | ** | |||||||
16007106-C-A | 13895226-C-A | ** | |||||||
16008037-C-A | 13896157-C-A | ** | |||||||
16035558-TA-T | 13923678-TA-T | ** | |||||||
16059035-T-TTC | 13947155-T-TTC | ** | |||||||
16062143-T-A | 13950263-T-A | ** | |||||||
16675569-G-A | 14563689-G-A | FTB53892 | ** | ||||||
16831064-C-A | 14719184-C-A | ** | |||||||
16842789-C-A | 14730909-C-A | ** | |||||||
16868848-C-A | 14756968-C-A | ** | |||||||
16874737-GA-G | 14762857-GA-G | ** | |||||||
17137015-T-G | 15025135-T-G | ** | |||||||
17262969-C-G | 15151089-C-G | ** | |||||||
17367654-C-A | 15255774-C-A | ** | |||||||
17452390-C-CA | 15340510-C-CA | ** | |||||||
17454955-G-T | 15343075-G-T | ** | |||||||
17464925-C-A | 15353045-C-A | ** | |||||||
17466690-C-A | 15354810-C-A | ** | |||||||
17538496-G-T | 15426616-G-T | ** | |||||||
17539443-C-T | 15427563-C-T | ** | |||||||
17545533-AG-A | 15433653-AG-A | ** | |||||||
17568202-C-A | 15456322-C-A | ** | |||||||
17588745-G-A | 15476865-G-A | ** | |||||||
17605189-A-T | 15493309-A-T | ** | |||||||
17628662-G-T | 15516782-G-T | ** | |||||||
17858900-G-T | 15747020-G-T | ** | |||||||
17870967-G-A | 15759087-G-A | ** | |||||||
17923915-G-T | 15812035-G-T | ** | |||||||
17993062-A-AG | 15881182-A-AG | P7_Prx | ** | ||||||
17994969-ATTC-A | 15883089-ATTC-A | P7_Prx | ** | ||||||
18089195-C-A | 15977315-C-A | ** | |||||||
18159775-T-C | 16047895-T-C | ** | |||||||
18173164-T-A | 16061284-T-A | ** | |||||||
18211141-C-A | 16099261-C-A | ** | |||||||
18212370-C-A | 16100490-C-A | ** | |||||||
18232178-TC-T | 16120298-TC-T | ** | |||||||
18291535-A-G | 16179655-A-G | P6_Prx | ** | ||||||
18519351-C-A | 16407471-C-A | P6_Dst | ** | ||||||
18730422-A-G | 16618542-A-G | ** | |||||||
18906425-C-A | 16794545-C-A | ** | |||||||
19104650-T-C | 16992770-T-C | ** | |||||||
19129410-T-C | 17017530-T-C | ** | |||||||
19145545-C-T | 17033665-C-T | ** | |||||||
19146382-C-A | 17034502-C-A | ** | |||||||
19300274-T-C | 17188394-T-C | ** | |||||||
19356210-C-A | 17244330-C-A | ** | |||||||
19465051-C-A | 17353171-C-A | ** | |||||||
19552215-C-A | 17440335-C-A | ** | |||||||
19753793-C-A | 17641913-C-A | P5_Prx | ** | ||||||
19842227-G-T | 17730347-G-T | P5_Prx | ** | ||||||
20603825-A-G | 18441939-A-G | P5_Dst | ** | ||||||
20640445-G-T | 18478559-G-T | P4_Prx | ** | ||||||
21248760-A-G | 19086874-A-G | ** | |||||||
21297577-G-T | 19135691-G-T | ** | |||||||
21323582-A-G | 19161696-A-G | ** | |||||||
21340173-T-C | 19178287-T-C | ** | |||||||
21394841-C-A | 19232955-C-A | ** | |||||||
21455810-C-A | 19293924-C-A | ** | |||||||
21495510-A-G | 19333624-A-G | ** | |||||||
21744541-G-T | 19582655-G-T | ** | |||||||
21966264-A-G | 19804378-A-G | ** | |||||||
21968859-T-A | 19806973-T-A | ** | |||||||
22052509-C-A | 19890623-C-A | ** | |||||||
22135117-G-T | 19973231-G-T | ** | |||||||
22135199-G-T | 19973313-G-T | ** | |||||||
22150257-G-A | 19988371-G-A | ** | |||||||
22171151-G-C | 20009265-G-C | ** | |||||||
22171234-G-T | 20009348-G-T | ** | |||||||
22204388-A-C | 20042502-A-C | ** | |||||||
22212114-C-A | 20050228-C-A | Y108726 | ** | ||||||
22593255-A-G | 20431369-A-G | ** | |||||||
22876568-C-A | 20714682-C-A | ** | |||||||
23004599-T-G | 20842713-T-G | ** | |||||||
23340279-G-T | 21178393-G-T | ** | |||||||
23355225-C-A | 21193339-C-A | ** | |||||||
23355394-C-A | 21193508-C-A | ** | |||||||
23355533-A-T | 21193647-A-T | ** | |||||||
23391477-C-A | 21229591-C-A | ** | |||||||
23395939-A-C | 21234053-A-C | ** | |||||||
23425447-G-A | 21263561-G-A | ** | |||||||
23465762-G-T | 21303876-G-T | ** | |||||||
23952731-A-G | 21806584-A-G | ** | |||||||
24618868-CTTT-C | 22472721-CTTT-C | P3_t2 | 12×T | ** | |||||
24883615-A-C | 22737468-A-C | g1 | ** | ||||||
25029935-C-T | 22883788-C-T | g1 | ** | ||||||
25802574-A-G | 23656427-A-G | P1_b3 | ** | ||||||
25899745-T-C | 23753598-T-C | P1_Y1 | ** | ||||||
27699844-A-G | 25553697-A-G | P1_Y2 | ** | ||||||
27861916-G-T | 25715769-G-T | P1_Y2 | ** | ||||||
27906857-G-T | 25760710-G-T | P1_Y2 | ** | ||||||
28462042-C-A | 26315895-C-A | ** | |||||||
28475369-C-A | 26329222-C-A | ** | |||||||
28480836-C-A | 26334689-C-A | ** | |||||||
28485391-C-A | 26339244-C-A | ** | |||||||
28499360-C-A | 26353213-C-A | ** | |||||||
28500005-C-A | 26353858-C-A | ** | |||||||
28532940-C-A | 26386793-C-A | ** | |||||||
28550413-A-G | 26404266-A-G | ** | |||||||
28640097-C-A | 26493950-C-A | ** | |||||||
28693503-G-T | 26547356-G-T | ** | |||||||
28706363-G-C | 26560216-G-C | ** | |||||||
28714963-C-A | 26568816-C-A | ** | |||||||
28743002-C-A | 26596855-C-A | ** | |||||||
28774671-C-A | 26628524-C-A | ** | |||||||
28774722-C-A | 26628575-C-A | ** | |||||||
56823311-C-T | ** | ||||||||
56838254-G-T | ** | ||||||||
56848505-G-T | ** | ||||||||
56858376-GGAAAGA-G | ** | ||||||||
56879812-T-C | ** | ||||||||
13136633-A-G | 10626119-A-G | *** | |||||||
13136636-T-G | 10626122-T-G | *** | |||||||
13143380-G-T | 10632866-G-T | *** | |||||||
13452803-T-C | 11297127-T-C | *** | |||||||
16945899-G-A | 14834019-G-A | 9×A | *** | *** | |||||
13847547-T-C | 11726841-T-C | FTB39460 | *** | ||||||
13847562-T-C | 11726856-T-C | *** | |||||||
13847531-A-G | 11726825-A-G | *** | |||||||
7288120-C-T | 7420079-C-T | CTS1237 AMM436 | *** | *** | |||||
22484225-C-T | 20322339-C-T | BY53276 | DYZ19 | *** | |||||
13462158-C-T | 11306482-C-T | *** | |||||||
13138763-C-T | 10628249-C-T | *** | |||||||
9327729-T-A | 9490120-T-A | *** | |||||||
10023861-G-GTCTC | 10186252-G-GTCTC | *** | |||||||
13136566-C-T | 10626052-C-T | *** | |||||||
13136567-A-G | 10626053-A-G | *** | |||||||
18098741-CT-C | 15986861-CT-C | 10×T | *** | *** | |||||
22236318-G-A,C | 20074432-G-A,C | DYZ19 | *** | ||||||
18398174-TAC-T | 16286294-TAC-T | P6_Gap | 9×AC | *** | |||||
14967881-TA-T | 12855956-TA-T | 10×A | *** | ||||||
10799592-C-A | *** | ||||||||
10799599-C-G | *** | ||||||||
11014473-A-G | *** | ||||||||
10899991-G-T | *** | ||||||||
19479688-AGTGT-A,AGT | 17367808-AGTGT-A,AGT | 20×GT | *** | ||||||
10776512-C-T | *** | ||||||||
10781661-C-A | *** | ||||||||
27546676-TAA-T | 25400529-TAA-T | P1_Y2 | 13×A | *** | |||||
15474790-CTTT-C | 13362910-CTTT-C | 12×T | *** | ||||||
13809679-G-T | 11688973-G-T | *** | |||||||
9798229-AT-A | 9960620-AT-A | 8×T | *** | ||||||
2819960-CTTTTTT-C | 2951919-CTTTTTT-C | 17×T | *** | ||||||
4357677-G-T | 4489636-G-T | *** | |||||||
4919738-C-A | 5051697-C-A | *** | |||||||
6694042-G-T | 6826001-G-T | *** | |||||||
7390689-T-C | 7522648-T-C | *** | |||||||
7897325-G-T | 8029284-G-T | *** | |||||||
9952266-A-G | 10114657-A-G | *** | |||||||
10023173-C-A | 10185564-C-A | *** | |||||||
10653479-A-G,T | *** | ||||||||
10653496-C-G,T | *** | ||||||||
10944526-C-A | *** | ||||||||
16412785-G-A | 14300905-G-A | *** | |||||||
17101586-C-A | 14989706-C-A | *** | |||||||
17946635-CTTT-C,CTT | 15834755-CTTT-C,CTT | 20×T | *** | ||||||
18263424-C-A | 16151544-C-A | *** | |||||||
18390185-C-A | 16278305-C-A | P6_Gap | *** | ||||||
25850655-G-T | 23704508-G-T | P1_Y1 | *** | ||||||
28711651-C-A | 26565504-C-A | *** | |||||||
56849623-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.