Bruen
BigY2: 228829, FTDNA: 228829MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 228829 | FTDNA 228829 |
---|---|---|---|---|---|---|---|---|---|
19643962-G-A | 17532082-G-A | P5_Prx | A* | *** | |||||
20039848-T-C | 17927968-T-C | P5_Prx | A* | *** | |||||
6267718-G-A | 6399677-G-A | IR3_Dst | A* | ||||||
13470474-G-A | 11314798-G-A | A* | |||||||
24300843-G-T | 22154696-G-T | P3_t1 | A* | ||||||
13470489-C-T | 11314813-C-T | A* | |||||||
20652992-G-A | 18491106-G-A | P4_Prx | A* | ||||||
6248294-T-C | 6380253-T-C | BY59536 | IR3_Dst | + | *** | ||||
14591050-A-C | 12479250-A-C | Y | Y | ** | + | ||||
15088768-C-G | 12976857-C-G | Y | Y | + | + | ||||
16971071-G-C | 14859191-G-C | Y | Y | + | + | ||||
17872533-G-T | 15760653-G-T | Y | Y | + | + | ||||
17880341-C-T | 15768461-C-T | Y100501 | Y | Y | + | + | |||
17896494-G-C | 15784614-G-C | BY118241 | Y | Y | + | + | |||
21319182-C-T | 19157296-C-T | Y | Y | + | + | ||||
22267212-G-C | 20105326-G-C | BY171714 | DYZ19 | + | *** | ||||
22447818-T-C | 20285932-T-C | DYZ19 | ** | + | |||||
22466237-C-T | 20304351-C-T | BY33694 | DYZ19 | + | + | ||||
22485356-G-A | 20323470-G-A | DYZ19 | ** | + | |||||
6881911-CT-C | 7013870-CT-C | + | |||||||
15078281-T-G | 12966371-T-G | BY99614 | Y | Y | + | ||||
22095738-A-G | 19933852-A-G | Y | Y | + | |||||
13464486-C-A | 11308810-C-A | * | |||||||
28601661-G-A | 26455514-G-A | CTS12523 | ** | ||||||
8333480-TTTCTTC-T | 8465439-TTTCTTC-T | 31×TTC | ** | ||||||
6919388-C-A | 7051347-C-A | ** | |||||||
13447098-A-G | 11291422-A-G | ** | |||||||
6467373-G-T | 6599332-G-T | ** | |||||||
6467388-G-T | 6599347-G-T | ** | |||||||
6467392-C-T | 6599351-C-T | 15×T | ** | ||||||
23350617-A-T | 21188731-A-T | ** | |||||||
9964325-A-G | 10126716-A-G | ** | |||||||
16424657-C-A | 14312777-C-A | ** | |||||||
19358110-C-A | 17246230-C-A | ** | |||||||
18255888-T-A | 16144008-T-A | 22×A | ** | ||||||
5231926-G-T | 5363885-G-T | ** | |||||||
5231932-G-T | 5363891-G-T | ** | |||||||
20510996-C-T | 18349110-C-T | P5_Dst | ** | ||||||
22342070-G-A | 20180184-G-A | DYZ19 | ** | ||||||
22342067-A-G | 20180181-A-G | DYZ19 | ** | ||||||
19233033-T-C | 17121153-T-C | BY41918 | ** | ||||||
4630189-ATG-A | 4762148-ATG-A | ** | |||||||
5231929-C-T | 5363888-C-T | ** | |||||||
24235461-G-A | 22089314-G-A | P3_b1 | ** | ||||||
13205592-AAAAAT-A | 11049916-AAAAAT-A | ** | |||||||
15146353-A-G | 13034440-A-G | ** | |||||||
9700821-G-A | 9863212-G-A | IR3_Prx | ** | ||||||
17648536-ATTTTT-A | 15536656-ATTTTT-A | 22×T | ** | ||||||
23350625-A-T | 21188739-A-T | ** | |||||||
13448796-C-CTCCACTCCACTCCACTCCAG | 11293120-C-CTCCACTCCACTCCACTCCAG | ** | |||||||
15901424-C-A | 13789544-C-A | ** | |||||||
13468876-C-G | 11313200-C-G | ** | |||||||
10992288-T-TC | ** | ||||||||
6765640-G-T | 6897599-G-T | 21×T | ** | ||||||
10673898-C-T | ** | ||||||||
11030184-A-G | ** | ||||||||
18361488-G-A | 16249608-G-A | P6_Prx | ** | ||||||
21464536-C-A | 19302650-C-A | 19×A | ** | ||||||
16278595-C-A | 14166715-C-A | ** | |||||||
10964751-C-G | ** | ||||||||
13330430-C-A | 11174754-C-A | ** | |||||||
20434792-A-T | 18272906-A-T | P5_Dst | ** | ||||||
10865992-C-T | ** | ||||||||
23807569-A-C | 21645683-A-C | ** | |||||||
28704089-C-A | 26557942-C-A | ** | |||||||
10937422-C-T | ** | ||||||||
10937454-C-A | ** | ||||||||
10937456-A-C | ** | ||||||||
10937466-A-T | ** | ||||||||
10669417-T-TA | ** | ||||||||
17310939-GTT-G | 15199059-GTT-G | 13×T | ** | ||||||
22240955-C-A | 20079069-C-A | DYZ19 | ** | ||||||
15866115-T-A | 13754235-T-A | ** | |||||||
13404799-C-A | 11249123-C-A | ** | |||||||
24877503-CTTTTT-C | 22731356-CTTTTT-C | g1 | 23×T | ** | |||||
15940296-G-A | 13828416-G-A | ** | |||||||
21464518-C-A | 19302632-C-A | ** | |||||||
10983949-C-G | ** | ||||||||
18361473-G-A | 16249593-G-A | P6_Prx | ** | ||||||
23225500-C-A | 21063614-C-A | ** | |||||||
10821829-T-G | ** | ||||||||
13457690-C-G | 11302014-C-G | ** | |||||||
22023247-A-G | 19861361-A-G | ** | |||||||
10982173-C-T | ** | ||||||||
10982176-G-C | ** | ||||||||
10982186-A-T | ** | ||||||||
10983964-C-A | ** | ||||||||
21464529-T-C | 19302643-T-C | ** | |||||||
24509455-C-A | 22363308-C-A | ** | |||||||
10673830-T-C | BY83661 | ** | |||||||
15866117-T-A | 13754237-T-A | ** | |||||||
15882049-T-A | 13770169-T-A | ** | |||||||
9040925-A-ATATAT | 9203316-A-ATATAT | 17×AT | ** | ||||||
13584734-C-A | 11429058-C-A | ** | |||||||
3367115-C-A | 3499074-C-A | ** | |||||||
17159016-G-C | 15047136-G-C | ** | |||||||
16952570-C-A | 14840690-C-A | ** | |||||||
6882478-CT-C | 7014437-CT-C | 10×T | ** | ||||||
17158999-C-G | 15047119-C-G | ** | |||||||
17159011-C-T | 15047131-C-T | ** | |||||||
13963371-C-A | 11842665-C-A | ** | |||||||
7706332-C-A | 7838291-C-A | ** | |||||||
8016963-TG-T | 8148922-TG-T | ** | |||||||
2909234-CAAAA-C | 3041193-CAAAA-C | 16×A | ** | ||||||
7397674-C-A | 7529633-C-A | ** | |||||||
5204565-C-A | 5336524-C-A | ** | |||||||
10669404-ATCTCC-A | ** | ||||||||
10669425-A-T | ** | ||||||||
11673774-T-G | ** | ||||||||
2729681-A-T | 2861640-A-T | ** | |||||||
10955474-T-A | ** | ||||||||
26153981-G-T | 24007834-G-T | P1_Y1 | ** | ||||||
4908213-G-T | 5040172-G-T | FT49113 | ** | ||||||
3965264-G-T | 4097223-G-T | ** | |||||||
28779043-A-T | 26632896-A-T | ** | |||||||
9700819-G-A | 9863210-G-A | IR3_Prx | ** | ||||||
26153990-G-T | 24007843-G-T | P1_Y1 | ** | ||||||
10673834-A-T | BY83662 | ** | |||||||
9034570-T-G | 9196961-T-G | ** | |||||||
19567070-C-A | 17455190-C-A | ** | |||||||
10974962-A-G | ** | ||||||||
15753203-C-A | 13641323-C-A | MF4150 | ** | ||||||
7886506-C-A | 8018465-C-A | FT195587 | ** | ||||||
2708588-C-A | 2840547-C-A | ** | |||||||
18361475-T-A | 16249595-T-A | P6_Prx | ** | ||||||
10955488-T-C | ** | ||||||||
21477030-C-A | 19315144-C-A | ** | |||||||
10955463-T-A | ** | ||||||||
20568507-T-A | 18406621-T-A | P5_Dst | ** | ||||||
24475401-C-A | 22329254-C-A | ** | |||||||
2860159-C-A | 2992118-C-A | ** | |||||||
17323508-G-A | 15211628-G-A | ** | |||||||
11646236-CGGAAT-C | ** | ||||||||
20650574-T-A | 18488688-T-A | P4_Prx | ** | ||||||
22791072-C-A | 20629186-C-A | ** | |||||||
13527688-C-A | 11372012-C-A | ** | |||||||
15747973-G-T | 13636093-G-T | ** | |||||||
9764123-T-C | 9926514-T-C | ** | |||||||
9764125-T-C | 9926516-T-C | ** | |||||||
9764145-AAT-A | 9926536-AAT-A | ** | |||||||
5219481-C-A | 5351440-C-A | ** | |||||||
4077677-T-A | 4209636-T-A | ** | |||||||
18906172-C-A | 16794292-C-A | ** | |||||||
23807564-G-C | 21645678-G-C | ** | |||||||
17263213-C-A | 15151333-C-A | ** | |||||||
16071316-C-A | 13959436-C-A | ** | |||||||
15943898-C-A | 13832018-C-A | ** | |||||||
56836344-C-CA | ** | ||||||||
6881268-C-A | 7013227-C-A | ** | |||||||
28773011-C-A | 26626864-C-A | ** | |||||||
13196136-C-A | 11040460-C-A | ** | |||||||
15650664-C-A | 13538784-C-A | ** | |||||||
17217152-C-A | 15105272-C-A | ** | |||||||
10983998-T-C | ** | ||||||||
2738743-A-T | 2870702-A-T | ** | |||||||
17653881-T-A | 15542001-T-A | ** | |||||||
14807385-C-A | 12695456-C-A | ** | |||||||
6671362-C-A | 6803321-C-A | ** | |||||||
16932793-C-A | 14820913-C-A | ** | |||||||
9735695-A-T | 9898086-A-T | IR3_Prx | ** | ||||||
10679320-G-T | ** | ||||||||
3367077-C-A | 3499036-C-A | ** | |||||||
13446798-C-A | 11291122-C-A | ** | |||||||
16319304-C-A | 14207424-C-A | ** | |||||||
11673751-G-T | ** | ||||||||
17122216-AT-A | 15010336-AT-A | 8×T | ** | ||||||
13932472-C-A | 11811766-C-A | ** | |||||||
25974655-C-A | 23828508-C-A | P1_Y1 | ** | ||||||
59013615-T-A | 56867468-T-A | ** | |||||||
56867480-T-TAA | ** | ||||||||
10988859-C-A | ** | ||||||||
13482920-C-A | 11327244-C-A | ** | |||||||
5231923-C-T | 5363882-C-T | ** | |||||||
13456923-TTTCCA-T | 11301247-TTTCCA-T | ** | |||||||
2833403-C-A | 2965362-C-A | ** | |||||||
56742673-A-G | ** | ||||||||
7336878-C-A | 7468837-C-A | ** | |||||||
56835034-T-G | ** | ||||||||
56835036-T-C | ** | ||||||||
18125570-C-A | 16013690-C-A | ** | |||||||
7334203-C-A | 7466162-C-A | ** | |||||||
11651056-C-A | ** | ||||||||
24595386-C-G | 22449239-C-G | P3_t2 | ** | ||||||
14512076-C-A | 12400281-C-A | ** | |||||||
18361477-G-A | 16249597-G-A | P6_Prx | ** | ||||||
6510534-C-A | 6642493-C-A | ** | |||||||
14599045-G-T | 12487245-G-T | ** | |||||||
9955376-C-A | 10117767-C-A | ** | |||||||
14826540-A-T | 12714607-A-T | ** | |||||||
17648566-G-T | 15536686-G-T | ** | |||||||
20888625-T-A | 18726739-T-A | P4_Dst | ** | ||||||
11004353-T-C | ** | ||||||||
8776635-C-T | 8908594-C-T | ** | |||||||
15940136-T-A | 13828256-T-A | ** | |||||||
16777984-C-A | 14666104-C-A | ** | |||||||
6954827-A-G | 7086786-A-G | ** | |||||||
15986732-C-A | 13874852-C-A | ** | |||||||
13480431-C-T | 11324755-C-T | ** | |||||||
21391588-C-T | 19229702-C-T | FT2163 | ** | ||||||
18037807-C-A | 15925927-C-A | ** | |||||||
10928930-C-A | ** | ||||||||
56823247-G-T | ** | ||||||||
13715653-C-A | 11559977-C-A | ** | |||||||
13891580-A-C | 11770874-A-C | ** | |||||||
13422834-C-A | 11267158-C-A | ** | |||||||
14423322-C-A | 12302597-C-A | ** | |||||||
56861825-A-ACAAAC | ** | ||||||||
28734782-C-A | 26588635-C-A | FT349302 | ** | ||||||
28767794-C-A | 26621647-C-A | ** | |||||||
13898844-A-T | 11778138-A-T | ** | |||||||
14520893-C-A | 12409094-C-A | ** | |||||||
15767030-C-A | 13655150-C-A | ** | |||||||
15423453-C-T | 13311573-C-T | FTB52223 | ** | ||||||
4757120-T-A | 4889079-T-A | ** | |||||||
14538714-C-A | 12426915-C-A | ** | |||||||
28507481-C-A | 26361334-C-A | ** | |||||||
20569358-G-T | 18407472-G-T | P5_Dst | ** | ||||||
20927101-T-TC | 18765215-T-TC | P4_Dst | ** | ||||||
10861108-C-A | ** | ||||||||
11010411-G-A | ** | ||||||||
19249481-C-A | 17137601-C-A | ** | |||||||
23435714-C-T | 21273828-C-T | ** | |||||||
21139464-C-A | 18977578-C-A | ** | |||||||
15753200-A-T | 13641320-A-T | ** | |||||||
5459991-C-A | 5591950-C-A | FTB16598 | ** | ||||||
8119225-C-A | 8251184-C-A | ** | |||||||
3440433-C-A | 3572392-C-A | ** | |||||||
17255121-C-A | 15143241-C-A | ** | |||||||
26834681-A-G | 24688534-A-G | P1_g2 | ** | ||||||
15649947-C-A | 13538067-C-A | ** | |||||||
10648069-C-A | ** | ||||||||
28369981-T-A | 26223834-T-A | P1_gr2 | ** | ||||||
10995447-C-A | ** | ||||||||
22316357-C-A | 20154471-C-A | DYZ19 | ** | ||||||
14367596-C-A | 12246892-C-A | S15879 | ** | ||||||
14422224-C-A | 12301499-C-A | ** | |||||||
27862454-T-A | 25716307-T-A | P1_Y2 | ** | ||||||
17426295-C-A | 15314415-C-A | ** | |||||||
28530862-C-T | 26384715-C-T | ** | |||||||
6791840-A-G | 6923799-A-G | ** | |||||||
14099904-C-A | 11979198-C-A | ** | |||||||
7183664-C-A | 7315623-C-A | ** | |||||||
15940140-T-A | 13828260-T-A | ** | |||||||
28553991-TC-T | 26407844-TC-T | ** | |||||||
13468198-C-A | 11312522-C-A | ** | |||||||
8974532-G-T | 9136923-G-T | ** | |||||||
25334008-A-T | 23187861-A-T | P2_r1 | ** | ||||||
13480399-T-A | 11324723-T-A | ** | |||||||
13480407-C-T | 11324731-C-T | ** | |||||||
13480412-C-G | 11324736-C-G | ** | |||||||
13480416-G-C | 11324740-G-C | ** | |||||||
21438327-C-A | 19276441-C-A | ** | |||||||
2852630-C-A | 2984589-C-A | ** | |||||||
21939653-G-T | 19777767-G-T | ZQ161 | ** | ||||||
13453386-G-T | 11297710-G-T | ** | |||||||
14106876-C-A | 11986170-C-A | ** | |||||||
2729675-A-G | 2861634-A-G | ** | |||||||
10847617-C-A | ** | ||||||||
7008754-C-A | 7140713-C-A | ** | |||||||
7235006-C-A | 7366965-C-A | ** | |||||||
10039938-C-A | 10202329-C-A | ** | |||||||
7402113-C-A | 7534072-C-A | ** | |||||||
4271234-G-T | 4403193-G-T | ** | |||||||
21391582-C-A | 19229696-C-A | ** | |||||||
56835067-T-C | ** | ||||||||
4243722-C-A | 4375681-C-A | ** | |||||||
7108230-C-A | 7240189-C-A | ** | |||||||
15475068-T-C | 13363188-T-C | ** | |||||||
22134099-C-A | 19972213-C-A | ** | |||||||
6086069-C-A | 6218028-C-A | ** | |||||||
21363182-C-A | 19201296-C-A | ** | |||||||
5708517-C-A | 5840476-C-A | ** | |||||||
20101637-C-T | 17989757-C-T | P5_Dst | ** | ||||||
13218966-CAAAAAAAA-C | 11063290-CAAAAAAAA-C | 21×A | ** | ||||||
17192570-C-A | 15080690-C-A | ** | |||||||
7221391-C-A | 7353350-C-A | ** | |||||||
22287076-A-G | 20125190-A-G | DYZ19 | ** | ||||||
10668930-C-A | ** | ||||||||
10759994-C-CTGGT | ** | ||||||||
10765714-C-A | ** | ||||||||
22732671-C-A | 20570785-C-A | ** | |||||||
19088445-C-A | 16976565-C-A | ** | |||||||
10774274-G-T | ** | ||||||||
18401197-C-A | 16289317-C-A | P6_Gap | ** | ||||||
5977031-C-A | 6108990-C-A | ** | |||||||
3405448-C-A | 3537407-C-A | ** | |||||||
7053682-T-C | 7185641-T-C | ** | |||||||
2649626-C-A | 2781585-C-A | ** | |||||||
2697637-C-A | 2829596-C-A | ** | |||||||
2701196-G-C | 2833155-G-C | ** | |||||||
2970404-CT-C | 3102363-CT-C | ** | |||||||
2975673-C-G | 3107632-C-G | ** | |||||||
3074727-C-A | 3206686-C-A | ** | |||||||
3076046-C-A | 3208005-C-A | ** | |||||||
3094532-G-T | 3226491-G-T | ** | |||||||
3228644-T-C | 3360603-T-C | ** | |||||||
3242235-G-T | 3374194-G-T | ** | |||||||
3376137-C-A | 3508096-C-A | ** | |||||||
3452736-C-A | 3584695-C-A | ** | |||||||
3461172-C-A | 3593131-C-A | ** | |||||||
3461316-C-A | 3593275-C-A | ** | |||||||
3461330-C-A | 3593289-C-A | ** | |||||||
3650140-C-A | 3782099-C-A | ** | |||||||
3651301-G-T | 3783260-G-T | ** | |||||||
3897784-G-T | 4029743-G-T | ** | |||||||
3920256-G-T | 4052215-G-T | ** | |||||||
3942659-G-T | 4074618-G-T | ** | |||||||
3946286-C-T | 4078245-C-T | ** | |||||||
3953945-C-A | 4085904-C-A | ** | |||||||
3975782-G-T | 4107741-G-T | ** | |||||||
4138139-C-A | 4270098-C-A | ** | |||||||
4138146-C-A | 4270105-C-A | ** | |||||||
4151102-G-T | 4283061-G-T | ** | |||||||
4217409-G-T | 4349368-G-T | ** | |||||||
4446560-G-T | 4578519-G-T | ** | |||||||
4473107-G-T | 4605066-G-T | ** | |||||||
4489288-G-A | 4621247-G-A | ** | |||||||
4524253-C-A | 4656212-C-A | ** | |||||||
4540966-A-G | 4672925-A-G | ** | |||||||
4562325-C-A | 4694284-C-A | ** | |||||||
4707025-G-T | 4838984-G-T | ** | |||||||
4790099-G-T | 4922058-G-T | ** | |||||||
4796538-C-A | 4928497-C-A | ** | |||||||
4828766-C-A | 4960725-C-A | ** | |||||||
4949345-G-T | 5081304-G-T | ** | |||||||
4968461-A-G | 5100420-A-G | ** | |||||||
5038625-G-T | 5170584-G-T | ** | |||||||
5117757-T-G | 5249716-T-G | ** | |||||||
5130439-C-T | 5262398-C-T | ** | |||||||
5130530-G-T | 5262489-G-T | ** | |||||||
5164756-G-T | 5296715-G-T | ** | |||||||
5190756-T-C | 5322715-T-C | ** | |||||||
5220515-C-A | 5352474-C-A | ** | |||||||
5231913-GA-G | 5363872-GA-G | ** | |||||||
5231939-A-C | 5363898-A-C | ** | |||||||
5282603-G-T | 5414562-G-T | ** | |||||||
5292874-C-A | 5424833-C-A | ** | |||||||
5317025-A-G | 5448984-A-G | ** | |||||||
5413755-G-T | 5545714-G-T | ** | |||||||
5426720-G-T | 5558679-G-T | ** | |||||||
5558436-G-T | 5690395-G-T | ** | |||||||
5631288-T-TC | 5763247-T-TC | ** | |||||||
5829367-G-T | 5961326-G-T | ** | |||||||
5853519-A-C | 5985478-A-C | ** | |||||||
5925075-C-A | 6057034-C-A | ** | |||||||
5999524-G-A | 6131483-G-A | ** | |||||||
6013680-G-T | 6145639-G-T | ** | |||||||
6095835-A-C | 6227794-A-C | ** | |||||||
6099068-A-G | 6231027-A-G | ** | |||||||
6228315-A-G | 6360274-A-G | IR3_Dst | ** | ||||||
6411244-C-A | 6543203-C-A | ** | |||||||
6434643-G-A | 6566602-G-A | ** | |||||||
6467378-A-T | 6599337-A-T | ** | |||||||
6723920-C-A | 6855879-C-A | ** | |||||||
6728533-G-T | 6860492-G-T | ** | |||||||
6728566-G-T | 6860525-G-T | ** | |||||||
6762799-C-A | 6894758-C-A | ** | |||||||
6795376-C-A | 6927335-C-A | ** | |||||||
6881200-T-G | 7013159-T-G | ** | |||||||
6918336-A-T | 7050295-A-T | ** | |||||||
6918479-T-A | 7050438-T-A | ** | |||||||
7029898-G-C | 7161857-G-C | ** | |||||||
7075949-A-T | 7207908-A-T | ** | |||||||
7108207-C-A | 7240166-C-A | ** | |||||||
7111154-C-A | 7243113-C-A | ** | |||||||
7112544-C-A | 7244503-C-A | ** | |||||||
7115381-T-G | 7247340-T-G | ** | |||||||
7165333-A-T | 7297292-A-T | ** | |||||||
7184860-T-C | 7316819-T-C | ** | |||||||
7202174-G-T | 7334133-G-T | ** | |||||||
7221387-C-A | 7353346-C-A | ** | |||||||
7228850-C-A | 7360809-C-A | ** | |||||||
7255535-T-C | 7387494-T-C | ** | |||||||
7269377-C-A | 7401336-C-A | ** | |||||||
7299622-G-T | 7431581-G-T | ** | |||||||
7313163-C-A | 7445122-C-A | ** | |||||||
7318587-G-A | 7450546-G-A | ** | |||||||
7321920-C-A | 7453879-C-A | ** | |||||||
7336348-C-A | 7468307-C-A | ** | |||||||
7363864-G-T | 7495823-G-T | ** | |||||||
7380362-G-A | 7512321-G-A | 10×A | ** | ||||||
7400314-C-A | 7532273-C-A | ** | |||||||
7469369-T-A | 7601328-T-A | IR1_L | ** | ||||||
7590675-G-T | 7722634-G-T | ** | |||||||
7759308-G-T | 7891267-G-T | ** | |||||||
7861307-C-T | 7993266-C-T | ** | |||||||
7989215-C-A | 8121174-C-A | ** | |||||||
7994210-G-A | 8126169-G-A | ** | |||||||
8085691-G-A | 8217650-G-A | ** | |||||||
8166610-C-A | 8298569-C-A | ** | |||||||
8325508-G-T | 8457467-G-T | ** | |||||||
8513579-T-A | 8645538-T-A | ** | |||||||
8694080-G-T | 8826039-G-T | ** | |||||||
8776640-C-T | 8908599-C-T | ** | |||||||
8827327-A-G | 8959286-A-G | ** | |||||||
8865816-T-G | 8997775-T-G | ** | |||||||
8912994-G-T | 9044953-G-T | ** | |||||||
9125614-T-G | ** | ||||||||
9034569-T-G | 9196960-T-G | ** | |||||||
9034572-T-A | 9196963-T-A | ** | |||||||
9063782-T-A | 9226173-T-A | ** | |||||||
9088825-G-T | 9251216-G-T | ** | |||||||
9193075-C-G | 9355466-C-G | ** | |||||||
9408454-C-A | 9570845-C-A | ** | |||||||
9440285-C-T | 9602676-C-T | ** | |||||||
9511375-G-T | 9673766-G-T | ** | |||||||
9558158-G-T | 9720549-G-T | IR3_Prx | ** | ||||||
9832620-T-A | 9995011-T-A | ** | |||||||
9849805-C-A | 10012196-C-A | FT130636 | ** | ||||||
9952096-C-A | 10114487-C-A | ** | |||||||
10008125-A-T | 10170516-A-T | ** | |||||||
10631525-T-C | ** | ||||||||
10685507-C-T | ** | ||||||||
10753276-A-G | ** | ||||||||
10770009-T-C | ** | ||||||||
10774289-C-G | ** | ||||||||
10785595-C-T | ** | ||||||||
10809471-T-C | ** | ||||||||
10811410-C-A | ** | ||||||||
10811442-TTCC-T | ** | ||||||||
10832302-A-T | ** | ||||||||
10836914-C-T | FT433456 | ** | |||||||
10863765-T-C | ** | ||||||||
10885707-A-T | ** | ||||||||
10949459-A-G | ** | ||||||||
10951930-A-C | ** | ||||||||
10951934-T-C | ** | ||||||||
10951935-T-A | ** | ||||||||
10983976-A-AC | ** | ||||||||
10983977-T-TGCAC | ** | ||||||||
10983985-C-CACTCA | ** | ||||||||
11000006-C-A | ** | ||||||||
11004339-A-C | ** | ||||||||
11004357-CT-C | ** | ||||||||
11004804-C-A | ** | ||||||||
13194735-C-T | 11039059-C-T | ** | |||||||
13236223-G-C | 11080547-G-C | ** | |||||||
13287407-G-A | 11131731-G-A | ** | |||||||
13324662-C-A | 11168986-C-A | ** | |||||||
13371810-A-G | 11216134-A-G | ** | |||||||
13452773-C-A | 11297097-C-A | ** | |||||||
13545079-C-A | 11389403-C-A | ** | |||||||
13611896-G-T | 11456220-G-T | ** | |||||||
13643484-C-G | 11487808-C-G | ** | |||||||
13643485-A-G | 11487809-A-G | ** | |||||||
13643491-G-A | 11487815-G-A | ** | |||||||
13671391-T-G | 11515715-T-G | ** | |||||||
13705472-A-G | 11549796-A-G | ** | |||||||
11664767-A-G | ** | ||||||||
13856605-A-C | 11735899-A-C | ** | |||||||
13874599-C-A | 11753893-C-A | ** | |||||||
13891595-C-A | 11770889-C-A | ** | |||||||
13895887-C-A | 11775181-C-A | ** | |||||||
13902283-T-G | 11781577-T-G | ** | |||||||
13928069-A-C | 11807363-A-C | ** | |||||||
13939704-C-A | 11818998-C-A | ** | |||||||
13941711-G-A | 11821005-G-A | ** | |||||||
13941712-A-T | 11821006-A-T | ** | |||||||
13961717-C-A | 11841011-C-A | ** | |||||||
13967021-C-A | 11846315-C-A | ** | |||||||
14029374-C-T | 11908668-C-T | FT186258 | ** | ||||||
14045624-C-A | 11924918-C-A | ** | |||||||
14046552-C-A | 11925846-C-A | FT276928 | ** | ||||||
14047896-G-T | 11927190-G-T | ** | |||||||
14135099-A-C | 12014393-A-C | ** | |||||||
14195840-G-T | 12075134-G-T | ** | |||||||
14195934-T-A | 12075228-T-A | ** | |||||||
14218687-C-T | 12097981-C-T | ** | |||||||
14227680-G-T | 12106974-G-T | ** | |||||||
14245113-C-A | 12124407-C-A | ** | |||||||
14285778-T-C | 12165072-T-C | FTB80888 | ** | ||||||
14345065-A-G | 12224360-A-G | ** | |||||||
14356576-T-C | 12235871-T-C | ** | |||||||
14358382-C-A | 12237677-C-A | ** | |||||||
14361624-A-T | 12240919-A-T | ** | |||||||
14364088-C-A | 12243383-C-A | ** | |||||||
14379177-T-C | 12258473-T-C | ** | |||||||
14406692-C-T | 12285990-C-T | Y66660 | ** | ||||||
14474932-C-T | 12354201-C-T | ** | |||||||
14566632-A-T | 12454832-A-T | ** | |||||||
14577477-C-T | 12465677-C-T | FT180057 | ** | ||||||
14582214-C-A | 12470414-C-A | ** | |||||||
14609795-GTC-G | 12497997-GTC-G | ** | |||||||
14842533-C-A | 12730599-C-A | ** | |||||||
15011866-T-C | 12899954-T-C | ** | |||||||
15198608-C-A | 13086694-C-A | ** | |||||||
15202324-A-T | 13090410-A-T | ** | |||||||
15324113-C-A | 13212231-C-A | ** | |||||||
15423423-C-G | 13311543-C-G | ** | |||||||
15423429-C-A | 13311549-C-A | ** | |||||||
15423431-C-T | 13311551-C-T | ** | |||||||
15556862-C-A | 13444982-C-A | ** | |||||||
15606383-C-A | 13494503-C-A | ** | |||||||
15606409-C-T | 13494529-C-T | ** | |||||||
15739684-T-A | 13627804-T-A | ** | |||||||
15768934-T-C | 13657054-T-C | ** | |||||||
15786035-T-A | 13674155-T-A | ** | |||||||
15818512-T-C | 13706632-T-C | ** | |||||||
15839817-TG-T | 13727937-TG-T | ** | |||||||
15844947-C-A | 13733067-C-A | ** | |||||||
15866891-A-G | 13755011-A-G | ** | |||||||
15882056-C-G | 13770176-C-G | ** | |||||||
15897673-C-A | 13785793-C-A | ** | |||||||
15987553-G-T | 13875673-G-T | ** | |||||||
16017688-T-A | 13905808-T-A | ** | |||||||
16021146-C-A | 13909266-C-A | ** | |||||||
16029139-C-A | 13917259-C-A | ** | |||||||
16029142-C-A | 13917262-C-A | ** | |||||||
16032438-A-G | 13920558-A-G | ** | |||||||
16045428-G-T | 13933548-G-T | ** | |||||||
16074745-G-T | 13962865-G-T | ** | |||||||
16085629-G-C | 13973749-G-C | ** | |||||||
16179684-G-C | 14067804-G-C | ** | |||||||
16352986-T-C | 14241106-T-C | ** | |||||||
16413630-C-A | 14301750-C-A | ** | |||||||
16573409-C-A | 14461529-C-A | ** | |||||||
16573458-A-T | 14461578-A-T | ** | |||||||
16635817-C-A | 14523937-C-A | FT154172 | ** | ||||||
16666193-T-C | 14554313-T-C | ** | |||||||
16675981-T-A | 14564101-T-A | ** | |||||||
16700203-A-C | 14588323-A-C | ** | |||||||
16704655-C-A | 14592775-C-A | ** | |||||||
16707502-G-T | 14595622-G-T | ** | |||||||
16876850-T-C | 14764970-T-C | ** | |||||||
16881449-G-A | 14769569-G-A | ** | |||||||
16999097-G-T | 14887217-G-T | ** | |||||||
17093324-A-G | 14981444-A-G | ** | |||||||
17151430-C-A | 15039550-C-A | ** | |||||||
17196343-A-T | 15084463-A-T | ** | |||||||
17259671-C-A | 15147791-C-A | ** | |||||||
17323588-CA-C | 15211708-CA-C | ** | |||||||
17346262-C-A | 15234382-C-A | ** | |||||||
17374635-C-A | 15262755-C-A | ** | |||||||
17385554-C-T | 15273674-C-T | ** | |||||||
17434116-C-A | 15322236-C-A | ** | |||||||
17434161-C-A | 15322281-C-A | ** | |||||||
17449279-C-A | 15337399-C-A | ** | |||||||
17518733-C-A | 15406853-C-A | ** | |||||||
17580787-G-A | 15468907-G-A | ** | |||||||
17691931-C-A | 15580051-C-A | ** | |||||||
17863355-G-T | 15751475-G-T | ** | |||||||
18058997-GT-G | 15947117-GT-G | ** | |||||||
18127891-C-T | 16016011-C-T | ** | |||||||
18185189-T-G | 16073309-T-G | ** | |||||||
18187849-G-T | 16075969-G-T | ** | |||||||
18205023-C-G | 16093143-C-G | ** | |||||||
18238927-T-C | 16127047-T-C | ** | |||||||
18523119-A-C | 16411239-A-C | P6_Dst | ** | ||||||
18565966-C-A | 16454086-C-A | ** | |||||||
18602173-G-A | 16490293-G-A | ** | |||||||
18605353-C-A | 16493473-C-A | ** | |||||||
18687532-A-T | 16575652-A-T | ** | |||||||
18692719-C-A | 16580839-C-A | ** | |||||||
18707886-C-A | 16596006-C-A | ** | |||||||
18766833-G-C | 16654953-G-C | ** | |||||||
18766838-C-CA | 16654958-C-CA | ** | |||||||
18789598-G-A | 16677718-G-A | ** | |||||||
18869901-A-C | 16758021-A-C | ** | |||||||
18919864-T-A | 16807984-T-A | ** | |||||||
18925507-T-C | 16813627-T-C | ** | |||||||
19007728-A-G | 16895848-A-G | ** | |||||||
19007749-C-G | 16895869-C-G | ** | |||||||
19007753-A-GT | 16895873-A-GT | ** | |||||||
19007755-TG-T | 16895875-TG-T | ** | |||||||
19007760-G-T | 16895880-G-T | ** | |||||||
19007769-T-C | 16895889-T-C | ** | |||||||
19007792-T-AA | 16895912-T-AA | ** | |||||||
19007799-A-G | 16895919-A-G | ** | |||||||
19007840-T-G | 16895960-T-G | ** | |||||||
19066110-T-A | 16954230-T-A | ** | |||||||
19104580-A-T | 16992700-A-T | ** | |||||||
19209826-C-A | 17097946-C-A | ** | |||||||
19218160-C-T | 17106280-C-T | ** | |||||||
19443484-C-A | 17331604-C-A | ** | |||||||
19449259-T-A | 17337379-T-A | ** | |||||||
19449261-T-A | 17337381-T-A | ** | |||||||
19732352-A-T | 17620472-A-T | P5_Prx | ** | ||||||
19732403-C-T | 17620523-C-T | P5_Prx | ** | ||||||
19732412-C-CTTCCT | 17620532-C-CTTCCT | P5_Prx | ** | ||||||
19740971-C-A | 17629091-C-A | P5_Prx | ** | ||||||
19740979-C-G | 17629099-C-G | P5_Prx | ** | ||||||
19740980-T-A | 17629100-T-A | P5_Prx | ** | ||||||
20340704-G-A | 18178818-G-A | P5_Dst | ** | ||||||
20376818-C-A | 18214932-C-A | P5_Dst | ** | ||||||
20497548-TCTTCC-T | 18335662-TCTTCC-T | P5_Dst | ** | ||||||
20557636-T-A | 18395750-T-A | P5_Dst | ** | ||||||
20569348-G-T | 18407462-G-T | P5_Dst | ** | ||||||
20695483-C-A | 18533597-C-A | P4_Prx | ** | ||||||
20695486-AC-A | 18533600-AC-A | P4_Prx | ** | ||||||
20695516-C-A | 18533630-C-A | P4_Prx | ** | ||||||
20741288-T-C | 18579402-T-C | P4_Prx | ** | ||||||
20755593-T-G | 18593707-T-G | P4_Prx | ** | ||||||
20778691-C-A | 18616805-C-A | P4_Prx | ** | ||||||
20779930-A-AG | 18618044-A-AG | P4_Prx | ** | ||||||
21029277-G-T | 18867391-G-T | P4_Dst | ** | ||||||
21112975-C-A | 18951089-C-A | ** | |||||||
21113050-C-G | 18951164-C-G | ** | |||||||
21136653-C-A | 18974767-C-A | ** | |||||||
21196650-C-A | 19034764-C-A | ** | |||||||
21281679-C-A | 19119793-C-A | ** | |||||||
21394369-G-A | 19232483-G-A | ** | |||||||
21416739-C-A | 19254853-C-A | ** | |||||||
21435154-C-A | 19273268-C-A | ** | |||||||
21457887-T-C | 19296001-T-C | ** | |||||||
21464532-G-A | 19302646-G-A | ** | |||||||
21747626-G-T | 19585740-G-T | ** | |||||||
21789664-G-T | 19627778-G-T | ** | |||||||
21824942-C-A | 19663056-C-A | ** | |||||||
21852645-A-G | 19690759-A-G | ** | |||||||
21959298-T-C | 19797412-T-C | FGC41341 | ** | ||||||
22044104-G-T | 19882218-G-T | ** | |||||||
22236212-T-G | 20074326-T-G | DYZ19 | ** | ||||||
22236223-G-C | 20074337-G-C | DYZ19 | ** | ||||||
22236230-G-A | 20074344-G-A | DYZ19 | ** | ||||||
22489476-C-T | 20327590-C-T | DYZ19 | ** | ||||||
22614819-T-A | 20452933-T-A | ** | |||||||
22714488-C-A | 20552602-C-A | ** | |||||||
22800670-A-T | 20638784-A-T | ** | |||||||
22800789-C-A | 20638903-C-A | ** | |||||||
22838992-C-T | 20677106-C-T | Y34995 | ** | ||||||
22881350-C-A | 20719464-C-A | ** | |||||||
22951156-GGT-G | 20789270-GGT-G | ** | |||||||
23007903-G-T | 20846017-G-T | Y26094 Z42216 | ** | ||||||
23059691-C-A | 20897805-C-A | ** | |||||||
23099833-C-T | 20937947-C-T | ** | |||||||
23099836-C-A | 20937950-C-A | ** | |||||||
23099844-C-A | 20937958-C-A | ** | |||||||
23099851-C-T | 20937965-C-T | ** | |||||||
23099852-A-G | 20937966-A-G | ** | |||||||
23099857-T-G | 20937971-T-G | ** | |||||||
23099861-A-C | 20937975-A-C | ** | |||||||
23099862-G-A | 20937976-G-A | ** | |||||||
23185420-C-A | 21023534-C-A | ** | |||||||
23229019-C-A | 21067133-C-A | ** | |||||||
23350610-A-C | 21188724-A-C | ** | |||||||
23401430-T-A | 21239544-T-A | ** | |||||||
23818414-G-C | 21656528-G-C | ** | |||||||
23825090-GA-T | 21663204-GA-T | ** | |||||||
24466467-C-T | 22320320-C-T | ** | |||||||
24466470-A-C | 22320323-A-C | ** | |||||||
24466478-C-A | 22320331-C-A | ** | |||||||
24512208-C-A | 22366061-C-A | ** | |||||||
24634137-G-A | 22487990-G-A | P3_t2 | ** | ||||||
25995084-C-CAT | 23848937-C-CAT | P1_Y1 | ** | ||||||
25995093-AGG-A | 23848946-AGG-A | P1_Y1 | ** | ||||||
27595501-T-G | 25449354-T-G | P1_Y2 | ** | ||||||
28462072-A-C | 26315925-A-C | ** | |||||||
28469307-A-G | 26323160-A-G | ** | |||||||
28500317-G-C | 26354170-G-C | ** | |||||||
28535779-T-C | 26389632-T-C | ** | |||||||
28537778-C-A | 26391631-C-A | ** | |||||||
28540872-G-T | 26394725-G-T | ** | |||||||
28554679-G-T | 26408532-G-T | ** | |||||||
28602597-C-A | 26456450-C-A | ** | |||||||
28731923-C-A | 26585776-C-A | ** | |||||||
28748766-T-C | 26602619-T-C | ** | |||||||
28754842-C-A | 26608695-C-A | ** | |||||||
28782326-C-A | 26636179-C-A | FT461663 | ** | ||||||
28788139-A-G | 26641992-A-G | ** | |||||||
28788142-G-A | 26641995-G-A | ** | |||||||
56707034-T-A | ** | ||||||||
56849504-T-C | ** | ||||||||
56880496-C-A | ** | ||||||||
30950-C-A | ** | ||||||||
22446625-T-A | 20284739-T-A | DYZ19 | *** | ||||||
58980014-A-C,T | 56833867-A-C,T | *** | |||||||
13456294-T-TATTCC | 11300618-T-TATTCC | 9×ATTCC | *** | ||||||
13728219-G-T | 11572543-G-T | *** | |||||||
22285144-T-C | 20123258-T-C | DYZ19 | *** | ||||||
7847574-G-GA | 7979533-G-GA | 10×A | *** | ||||||
13545333-AAG-A | 11389657-AAG-A | *** | |||||||
7029456-CCT-C | 7161415-CCT-C | *** | |||||||
22189233-AC-A | 20027347-AC-A | *** | |||||||
28700822-TTA-T | 26554675-TTA-T | *** | |||||||
14073653-T-TTAAATAAA | 11952947-T-TTAAATAAA | 9×TAAA | *** | ||||||
15171265-G-T | 13059351-G-T | *** | |||||||
19187385-ATT-A,AT | 17075505-ATT-A,AT | 28×T | *** | ||||||
58975243-TTTTATTCCATTTCAC-T,TTTGATTCCATTTCAC | 56829096-TTTTATTCCATTTCAC-T,TTTGATTCCATTTCAC | *** | |||||||
13464013-G-T | 11308337-G-T | *** | |||||||
17680075-A-T | 15568195-A-T | *** | |||||||
7098884-T-A | 7230843-T-A | *** | |||||||
13448821-T-A | 11293145-T-A | *** | |||||||
21515849-C-G | 19353963-C-G | *** | |||||||
10798332-A-T | *** | ||||||||
10798337-A-T | *** | ||||||||
10798347-A-G | *** | ||||||||
10798351-C-A | *** | ||||||||
10798388-T-C | *** | ||||||||
10785287-C-CTGTT | *** | ||||||||
10801768-A-T | *** | ||||||||
17632600-A-G | 15520720-A-G | *** | |||||||
17632606-A-T | 15520726-A-T | *** | |||||||
14656152-AAC-A,AAA | 12544217-AAC-A,AAA | *** | |||||||
22816365-T-A | 20654479-T-A | *** | |||||||
56834832-T-A | *** | ||||||||
10935601-C-T | *** | ||||||||
10807265-T-C | *** | ||||||||
13465926-C-T | 11310250-C-T | *** | |||||||
17632610-C-T | 15520730-C-T | *** | |||||||
15904146-T-A | 13792266-T-A | *** | |||||||
10994359-C-A | *** | ||||||||
15791419-C-A | 13679539-C-A | *** | |||||||
10669454-C-G | *** | ||||||||
10669403-C-T | *** | ||||||||
13456363-C-A | 11300687-C-A | *** | |||||||
21162690-C-A | 19000804-C-A | *** | |||||||
10987841-T-A | *** | ||||||||
13483311-A-G | 11327635-A-G | *** | |||||||
10999885-A-T | *** | ||||||||
23186658-C-A | 21024772-C-A | *** | |||||||
5242536-C-A | 5374495-C-A | *** | |||||||
15352861-CAAA-C,CAA | 13240980-CAAA-C,CAA | 17×A | *** | ||||||
5358634-C-A | 5490593-C-A | *** | |||||||
5358816-C-A | 5490775-C-A | *** | |||||||
8462064-C-A | 8594023-C-A | 26×A | *** | ||||||
7107757-C-A | 7239716-C-A | *** | |||||||
19172826-G-T | 17060946-G-T | *** | |||||||
14730386-G-A | 12618454-G-A | *** | |||||||
15185315-C-A | 13073401-C-A | *** | |||||||
24673163-G-A | 22527016-G-A | P3_b2 | *** | ||||||
10999890-A-G | *** | ||||||||
13489622-C-CATCA | 11333946-C-CATCA | *** | |||||||
13457722-A-T | 11302046-A-T | *** | |||||||
23435711-A-G | 21273825-A-G | *** | |||||||
14065847-C-A | 11945141-C-A | *** | |||||||
9936004-C-A | 10098395-C-A | *** | |||||||
56832336-A-G | *** | ||||||||
10648776-C-A | *** | ||||||||
21505554-C-T | 19343668-C-T | *** | |||||||
3550573-T-A,C | 3682532-T-A,C | *** | |||||||
9398165-C-T | 9560556-C-T | *** | |||||||
56835456-C-A | *** | ||||||||
13483334-C-G | 11327658-C-G | *** | |||||||
8768500-C-A | 8900459-C-A | *** | |||||||
16929849-C-A | 14817969-C-A | *** | |||||||
4138569-G-T | 4270528-G-T | *** | |||||||
5957032-G-A | 6088991-G-A | *** | |||||||
6780638-A-G | 6912597-A-G | *** | |||||||
7013244-AT-A | 7145203-AT-A | *** | |||||||
7284282-C-A | 7416241-C-A | *** | |||||||
7784612-G-T | 7916571-G-T | *** | |||||||
9427847-G-A | 9590238-G-A | *** | |||||||
9706449-C-A | 9868840-C-A | IR3_Prx | *** | ||||||
10038429-C-A | 10200820-C-A | *** | |||||||
10657359-C-A | *** | ||||||||
10789395-C-A | *** | ||||||||
10789402-T-C | *** | ||||||||
11017599-C-A | *** | ||||||||
13227368-C-A | 11071692-C-A | *** | |||||||
13243259-C-A | 11087583-C-A | *** | |||||||
13446622-C-A | 11290946-C-A | *** | |||||||
13446630-CA-C | 11290954-CA-C | *** | |||||||
13482651-G-A | 11326975-G-A | *** | |||||||
13485210-C-A | 11329534-C-A | *** | |||||||
13489660-C-G | 11333984-C-G | *** | |||||||
13643459-G-C | 11487783-G-C | *** | |||||||
13643459-G-GATTCA | 11487783-G-GATTCA | *** | |||||||
13643474-T-C | 11487798-T-C | *** | |||||||
13799041-G-T | 11678335-G-T | *** | |||||||
14008940-G-T | 11888234-G-T | *** | |||||||
14313834-C-A | 12193128-C-A | *** | |||||||
14315717-C-A | 12195011-C-A | *** | |||||||
14823630-C-A | 12711697-C-A | *** | |||||||
15612189-C-A | 13500309-C-A | *** | |||||||
15860362-C-A | 13748482-C-A | *** | |||||||
16552765-C-A | 14440885-C-A | *** | |||||||
16552793-T-C | 14440913-T-C | *** | |||||||
16961274-G-A | 14849394-G-A | *** | |||||||
16967447-G-A | 14855567-G-A | *** | |||||||
17244189-G-T | 15132309-G-T | *** | |||||||
17446903-A-T | 15335023-A-T | *** | |||||||
18017144-TATATATATAC-T | 15905264-TATATATATAC-T | *** | |||||||
19213280-T-A | 17101400-T-A | *** | |||||||
19461339-C-A | 17349459-C-A | *** | |||||||
21370889-C-A | 19209003-C-A | *** | |||||||
21625283-C-A | 19463397-C-A | *** | |||||||
23096754-G-C | 20934868-G-C | *** | |||||||
23741950-G-T | 21580064-G-T | *** | |||||||
23779965-C-T | 21618079-C-T | *** | |||||||
23789390-A-G | 21627504-A-G | *** | |||||||
24402601-C-A | 22256454-C-A | *** | |||||||
24880567-G-T | 22734420-G-T | g1 | *** | ||||||
28788148-G-A | 26642001-G-A | FT461810 | *** | ||||||
28788150-G-T | 26642003-G-T | *** | |||||||
28788155-G-A | 26642008-G-A | *** | |||||||
56832842-G-C,T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.