Pecknold
FGC: ZWT7E, FTDNA: 262388Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC ZWT7E |
---|---|---|---|---|---|---|---|---|
2731859-T-C | 2863818-T-C | FGC16727 | Y | Y | + | |||
5235100-C-T | 5367059-C-T | FGC16728 | + | |||||
8768238-C-G | 8900197-C-G | FGC16733 | Y | Y | + | |||
8809558-G-T | 8941517-G-T | FGC16734 | Y | Y | + | |||
9039408-A-G | 9201799-A-G | FGC16735 | Y | + | ||||
14284526-C-A | 12163820-C-A | FGC16736 | Y | + | ||||
15519162-A-G | 13407282-A-G | FGC16738 | Y | Y | + | |||
15888315-A-G | 13776435-A-G | FGC16739 | Y | + | ||||
19188593-G-C | 17076713-G-C | FGC16742 | Y | Y | + | |||
21406508-G-T | 19244622-G-T | FGC16743 | Y | Y | + | |||
21832167-C-T | 19670281-C-T | FGC16744 | Y | + | ||||
28592053-G-T | 26445906-G-T | FGC16745 | + | |||||
28638144-A-G | 26491997-A-G | FGC16746 | + | |||||
5386142-C-T | 5518101-C-T | FGC16729 | * | |||||
5661801-A-G | 5793760-A-G | FGC16730 | * | |||||
5864550-C-A | 5996509-C-A | FGC16731 | * | |||||
58845839-CATTCGAGTCCATTCG-C | 56745015-TTCGAATGGACTCGAA-T | ** | ||||||
13423560-C-T | 11267884-C-T | ** | ||||||
13432695-G-C | 11277019-G-C | ** | ||||||
23316016-C-CTTTATTTA | 21154130-C-CTTTATTTA | 11×TTTA | ** | |||||
7270276-C-CTTTTTT | 7402235-C-CTTTTTT | 25×T | ** | |||||
22241462-A-C | 20079576-A-C | DYZ19 | *** | |||||
22250888-T-A | 20089002-T-A | DYZ19 | *** | |||||
22251519-A-T | 20089633-A-T | DYZ19 | *** | |||||
22251518-A-C | 20089632-A-C | DYZ19 | *** | |||||
22232065-G-A | 20070179-G-A | DYZ19 | *** | |||||
22365649-G-A | 20203763-G-A | DYZ19 | *** | |||||
22503693-T-C | 20341807-T-C | DYZ19 | *** | |||||
22252645-TCTTCCTTTTGGC-CCTTAATTCTGGG | 20090759-TCTTCCTTTTGGC-CCTTAATTCTGGG | DYZ19 | *** | |||||
22435744-TGA-AGC | 20273858-TGA-AGC | DYZ19 | *** | |||||
22503151-CAGAA-AAGAG | 20341265-CAGAA-AAGAG | DYZ19 | *** | |||||
22366443-C-T | 20204557-C-T | DYZ19 | *** | |||||
58843764-A-C | 56747107-T-G | *** | ||||||
22248431-C-T | 20086545-C-T | DYZ19 | *** | |||||
22435950-C-T | 20274064-C-T | DYZ19 | *** | |||||
58874506-A-T | 56716365-T-A | *** | ||||||
58908683-G-T | 56682188-C-A | *** | ||||||
13486004-AA-TC | 11330328-AA-TC | *** | ||||||
22262664-AC-A | 20100778-AC-A | DYZ19 | *** | |||||
58910658-GCATTCCATTC-G | 56680183-AAATGGAATGG-A | 5×CATTC | *** | |||||
13740850-C-T | 11585174-C-T | *** | ||||||
58843740-A-C | 56747131-T-G | *** | ||||||
58909129-A-C | 56681742-T-G | *** | ||||||
13467509-GAAG-TACT | 11311833-GAAG-TACT | *** | ||||||
19098471-AC-A | 16986591-AC-A | *** | ||||||
22357694-C-A | 20195808-C-A | DYZ19 | *** | |||||
22309358-ATT-GTG | 20147472-ATT-GTG | DYZ19 | *** | |||||
22309318-GC-CG | 20147432-GC-CG | DYZ19 | *** | |||||
13414797-A-ATCTT | 11259121-A-ATCTT | 20×T | *** | |||||
22353013-G-A | 20191127-G-A | DYZ19 | *** | |||||
22353012-GG-AA | 20191126-GG-AA | DYZ19 | *** | |||||
22309544-GTGGT-CTGGG | 20147658-GTGGT-CTGGG | DYZ19 | *** | |||||
22352967-GT-TA | 20191081-GT-TA | DYZ19 | *** | |||||
22353018-TG-T | 20191132-TG-T | DYZ19 | *** | |||||
23832825-TTT-C | 21670939-TTT-C | *** | ||||||
22241386-C-T | 20079500-C-T | DYZ19 | *** | |||||
22480676-C-G | 20318790-C-G | DYZ19 | *** | |||||
22495918-G-C | 20334032-G-C | DYZ19 | *** | |||||
9951397-CAGACT-TAGACC | 10113788-CAGACT-TAGACC | *** | ||||||
13460356-T-G | 11304680-T-G | *** | ||||||
13876452-G-A | 11755746-G-A | *** | ||||||
22488496-G-T | 20326610-G-T | DYZ19 | *** | |||||
22292227-ATCCAGT-GTCAAGA | 20130341-ATCCAGT-GTCAAGA | DYZ19 | *** | |||||
22480925-ACTGG-TGTGA | 20319039-ACTGG-TGTGA | DYZ19 | *** | |||||
13716281-T-A | 11560605-T-A | *** | ||||||
19740992-C-A | 17629112-C-A | P5_Prx | 24×A | *** | ||||
22292454-G-T | 20130568-G-T | DYZ19 | *** | |||||
22292480-C-A | 20130594-C-A | DYZ19 | *** | |||||
58867514-T-A | 56723357-A-T | *** | ||||||
58867539-T-C | 56723332-A-G | *** | ||||||
58867556-C-T | 56723315-G-A | *** | ||||||
58910238-T-C | 56680633-A-G | *** | ||||||
58844025-C-CG | 56746845-T-TC | *** | ||||||
22257282-TACG-CATT | 20095396-TACG-CATT | DYZ19 | *** | |||||
22268165-CTTAGTGG-ATTGGTGT | 20106279-CTTAGTGG-ATTGGTGT | DYZ19 | *** | |||||
22488535-GAAGCTACC-TAAGTTGCA | 20326649-GAAGCTACC-TAAGTTGCA | DYZ19 | *** | |||||
58867576-CAGTCC-GAGTAA | 56723290-GGACTG-TTACTC | *** | ||||||
9930543-T-C | 10092934-T-C | FGC24635 | *** | |||||
22337810-C-T | 20175924-C-T | DYZ19 | *** | |||||
22503798-A-C | 20341912-A-C | DYZ19 | *** | |||||
13473565-G-C | 11317889-G-C | *** | ||||||
6489371-C-CAAAAAAAAAAA | 6621330-C-CAAAAAAAAAAA | 25×A | *** | |||||
22326778-CC-TA | 20164892-CC-TA | DYZ19 | *** | |||||
27617980-C-CAAAA | 25471833-C-CAAAA | P1_Y2 | 29×A | *** | ||||
8972605-T-C | 9134996-T-C | *** | ||||||
22252925-C-G | 20091039-C-G | DYZ19 | *** | |||||
24836738-A-G | 22690591-A-G | P3_b2 | *** | |||||
58874436-T-C | 56716435-A-G | *** | ||||||
22364988-T-A | 20203102-T-A | DYZ19 | *** | |||||
24643529-C-G | 22497382-C-G | P3_t2 | *** | |||||
10052639-C-A | 10215030-C-A | *** | ||||||
10052645-G-C | 10215036-G-C | *** | ||||||
22292441-T-C | 20130555-T-C | DYZ19 | *** | |||||
22309590-C-T | 20147704-C-T | BY23146 | DYZ19 | *** | ||||
22355178-C-G | 20193292-C-G | DYZ19 | *** | |||||
22421460-A-T | 20259574-A-T | DYZ19 | *** | |||||
58843147-C-T | 56747724-G-A | *** | ||||||
22309574-AC-TT | 20147688-AC-TT | DYZ19 | *** | |||||
58867486-TATTTTATTCCATGCC-T | 56723365-CAAATGGCATGGAATA-C | *** | ||||||
22480697-A-T | 20318811-A-T | DYZ19 | *** | |||||
22364759-T-A | 20202873-T-A | DYZ19 | *** | |||||
58874476-A-T | 56716395-T-A | *** | ||||||
58913232-TGATG-GAATT | 56677635-CATCA-AATTC | *** | ||||||
22328421-T-G | 20166535-T-G | DYZ19 | *** | |||||
22365130-A-T | 20203244-A-T | DYZ19 | *** | |||||
22480658-A-G | 20318772-A-G | DYZ19 | *** | |||||
58843776-GTACGATTCC-ATTGGAGTCA | 56747086-GGAATCGTAC-TGACTCCAAT | *** | ||||||
22308403-T-G | 20146517-T-G | DYZ19 | *** | |||||
22364876-A-G | 20202990-A-G | DYZ19 | *** | |||||
22364901-T-G | 20203015-T-G | DYZ19 | *** | |||||
58826702-T-A | 56764169-A-T | *** | ||||||
13467390-ACTC-TCTG | 11311714-ACTC-TCTG | *** | ||||||
7534392-G-GTTTT | 7666351-G-GTTTT | 13×T | *** | |||||
14429405-TTATA-T | 12308680-TTA-T | 15×TA | *** | |||||
22457192-G-A | 20295306-G-A | DYZ19 | *** | |||||
28385881-T-C | 26239734-T-C | P1_gr2 | *** | |||||
28385888-G-A | 26239741-G-A | P1_gr2 | *** | |||||
58843145-G-A | 56747726-C-T | *** | ||||||
58847152-G-A | 56743719-C-T | *** | ||||||
58907246-ATTTTATCA-TTCCGATCT | 56683617-TGATAAAAT-AGATCGGAA | *** | ||||||
13114401-G-C | 10603887-G-C | *** | ||||||
22366432-G-T | 20204546-G-T | DYZ19 | *** | |||||
58866420-T-A | 56724451-A-T | *** | ||||||
58840405-CA-TAG | 56750465-TG-CTA | *** | ||||||
22337297-T-C | 20175411-T-C | DYZ19 | *** | |||||
58838987-C-T | 56751884-G-A | *** | ||||||
22234419-A-C | 20072533-A-C | DYZ19 | *** | |||||
22234430-A-G | 20072544-A-G | DYZ19 | *** | |||||
58847150-C-T | 56743721-G-A | *** | ||||||
58856588-T-A | 56734283-A-T | *** | ||||||
13535656-T-TACAC | 11379980-T-TACAC | *** | ||||||
13535663-ATA-GTG | 11379987-ATA-GTG | *** | ||||||
13257299-TTT-ATA | 11101623-TTT-ATA | *** | ||||||
22307195-GT-CG | 20145309-GT-CG | DYZ19 | *** | |||||
13480124-T-A | 11324448-T-A | *** | ||||||
22292259-G-T | 20130373-G-T | DYZ19 | *** | |||||
22421683-TCC-ACA | 20259797-TCC-ACA | DYZ19 | *** | |||||
4778009-T-A | 4909968-T-A | *** | ||||||
7033240-C-A | 7165199-C-A | 15×A | *** | |||||
22336099-T-A | 20174213-T-A | DYZ19 | *** | |||||
22365677-T-G | 20203791-T-G | DYZ19 | *** | |||||
22502657-G-T | 20340771-G-T | DYZ19 | *** | |||||
9216149-G-T | 9378540-G-T | *** | ||||||
9342740-C-A | 9505131-C-A | *** | ||||||
58821133-TTC-T | 56769732-AAG-A | *** | ||||||
22336087-T-A | 20174201-T-A | DYZ19 | *** | |||||
22358425-T-A | 20196539-T-A | DYZ19 | *** | |||||
14926489-G-AA | 12814554-G-AA | *** | ||||||
9951061-CCA-C | 10113452-CCA-C | *** | ||||||
22335452-A-C | 20173566-A-C | DYZ19 | *** | |||||
26834849-G-A | 24688702-G-A | P1_g2 | *** | |||||
26834861-G-A | 24688714-G-A | P1_g2 | *** | |||||
22241315-T-C | 20079429-T-C | DYZ19 | *** | |||||
22324940-A-T | 20163054-A-T | DYZ19 | *** | |||||
13470654-CGGTCT-TGGAGA | 11314978-CGGTCT-TGGAGA | *** | ||||||
58898226-C-T | 56692645-G-A | *** | ||||||
16784555-G-A | 14672675-G-A | *** | ||||||
22479084-T-A | 20317198-T-A | BY53231 | DYZ19 | *** | ||||
10090748-G-A | 10253139-G-A | *** | ||||||
13464095-A-G | 11308419-A-G | FT443982 | *** | |||||
13475731-T-G | 11320055-T-G | *** | ||||||
13471261-G-A | 11315585-G-A | *** | ||||||
9962289-G-A | 10124680-G-A | *** | ||||||
22499354-A-G | 20337468-A-G | DYZ19 | *** | |||||
58893713-G-T | 56697158-C-A | *** | ||||||
5088778-A-G | 5220737-A-G | *** | ||||||
5088780-G-C | 5220739-G-C | *** | ||||||
5088784-G-T | 5220743-G-T | *** | ||||||
5088785-T-C | 5220744-T-C | *** | ||||||
5088789-G-C | 5220748-G-C | *** | ||||||
5479908-G-A | 5611867-G-A | FT69907 | *** | |||||
5479913-G-C | 5611872-G-C | *** | ||||||
6292472-C-T | 6424431-C-T | IR3_Dst | *** | |||||
6292488-G-T | 6424447-G-T | IR3_Dst | *** | |||||
6292492-G-T | 6424451-G-T | IR3_Dst | *** | |||||
6292493-A-T | 6424452-A-T | IR3_Dst | *** | |||||
6778575-C-T | 6910534-C-T | *** | ||||||
8178068-T-C | 8310027-T-C | *** | ||||||
9171320-C-T | 9333711-C-T | *** | ||||||
9193375-C-T | 9355766-C-T | *** | ||||||
9222832-G-T | 9385223-G-T | *** | ||||||
9302433-C-A | 9464824-C-A | *** | ||||||
9302436-C-T | 9464827-C-T | *** | ||||||
9302447-T-C | 9464838-T-C | *** | ||||||
9330716-T-G | 9493107-T-G | *** | ||||||
9330717-G-A | 9493108-G-A | *** | ||||||
9330718-G-T | 9493109-G-T | *** | ||||||
9342743-C-G | 9505134-C-G | *** | ||||||
9342744-C-G | 9505135-C-G | *** | ||||||
9342745-C-A | 9505136-C-A | *** | ||||||
10052627-T-A | 10215018-T-A | *** | ||||||
13104557-A-T | 10594043-A-T | *** | ||||||
13110063-T-A | 10599549-T-A | *** | ||||||
13110566-G-C | 10600052-G-C | *** | ||||||
13114430-G-C | 10603916-G-C | *** | ||||||
13257293-T-A | 11101617-T-A | *** | ||||||
13257295-T-A | 11101619-T-A | A3788 | *** | |||||
13257297-T-A | 11101621-T-A | *** | ||||||
13470657-T-A | 11314981-T-A | *** | ||||||
13472113-G-T | 11316437-G-T | *** | ||||||
13475721-G-A | 11320045-G-A | *** | ||||||
13548821-G-C | 11393145-G-C | *** | ||||||
13716267-G-A | 11560591-G-A | *** | ||||||
13716293-G-A | 11560617-G-A | *** | ||||||
13719752-C-G | 11564076-C-G | *** | ||||||
13720082-G-T | 11564406-G-T | *** | ||||||
14260531-A-G | 12139825-A-G | *** | ||||||
14434868-C-T | 12314141-C-T | *** | ||||||
14565610-A-C | 12453810-A-C | FT163235 | *** | |||||
14703999-T-A | 12592065-T-A | *** | ||||||
14704017-T-A | 12592083-T-A | *** | ||||||
14704039-A-T | 12592105-A-T | *** | ||||||
15233773-G-T | 13121859-G-T | *** | ||||||
15243175-C-T | 13131261-C-T | *** | ||||||
18446848-G-T | 16334968-G-T | P6_Dst | *** | |||||
18446850-T-A | 16334970-T-A | P6_Dst | *** | |||||
18446851-T-A | 16334971-T-A | P6_Dst | *** | |||||
18446858-T-A | 16334978-T-A | P6_Dst | *** | |||||
18446883-T-G | 16335003-T-G | P6_Dst | *** | |||||
18446885-T-A | 16335005-T-A | P6_Dst | *** | |||||
18446899-T-G | 16335019-T-G | P6_Dst | *** | |||||
19098458-G-A | 16986578-G-A | *** | ||||||
19177240-T-C | 17065360-T-C | *** | ||||||
19772427-T-A | 17660547-T-A | P5_Prx | *** | |||||
19772439-C-T | 17660559-C-T | P5_Prx | *** | |||||
20082227-G-T | 17970347-G-T | P5_Dst | *** | |||||
20212733-C-G | 18050847-C-G | P5_Dst | *** | |||||
20212734-T-A | 18050848-T-A | P5_Dst | *** | |||||
20212738-A-G | 18050852-A-G | P5_Dst | *** | |||||
20230049-G-T | 18068163-G-T | P5_Dst | *** | |||||
20230054-G-A | 18068168-G-A | P5_Dst | *** | |||||
20230062-G-A | 18068176-G-A | P5_Dst | *** | |||||
20230064-G-A | 18068178-G-A | P5_Dst | *** | |||||
20406917-G-T | 18245031-G-T | P5_Dst | *** | |||||
20406919-G-A | 18245033-G-A | P5_Dst | *** | |||||
20718339-A-T | 18556453-A-T | P4_Prx | *** | |||||
20718342-A-T | 18556456-A-T | P4_Prx | *** | |||||
22231996-A-T | 20070110-A-T | DYZ19 | *** | |||||
22232011-G-T | 20070125-G-T | DYZ19 | *** | |||||
22248475-C-T | 20086589-C-T | DYZ19 | *** | |||||
22292261-T-G | 20130375-T-G | DYZ19 | *** | |||||
22292440-A-C | 20130554-A-C | DYZ19 | *** | |||||
22307191-A-C | 20145305-A-C | DYZ19 | *** | |||||
22307195-G-C | 20145309-G-C | DYZ19 | *** | |||||
22308422-A-G | 20146536-A-G | DYZ19 | *** | |||||
22322853-G-A | 20160967-G-A | DYZ19 | *** | |||||
22324936-T-C | 20163050-T-C | DYZ19 | *** | |||||
22324937-A-C | 20163051-A-C | DYZ19 | *** | |||||
22324938-A-G | 20163052-A-G | DYZ19 | *** | |||||
22332938-T-C | 20171052-T-C | DYZ19 | *** | |||||
22335439-A-T | 20173553-A-T | DYZ19 | *** | |||||
22335440-A-C | 20173554-A-C | DYZ19 | *** | |||||
22335442-G-A | 20173556-G-A | DYZ19 | *** | |||||
22335466-T-A | 20173580-T-A | DYZ19 | *** | |||||
22337159-A-C | 20175273-A-C | DYZ19 | *** | |||||
22337164-A-G | 20175278-A-G | DYZ19 | *** | |||||
22337295-A-C | 20175409-A-C | DYZ19 | *** | |||||
22337298-G-A | 20175412-G-A | DYZ19 | *** | |||||
22337350-G-A | 20175464-G-A | DYZ19 | *** | |||||
22338012-T-G | 20176126-T-G | DYZ19 | *** | |||||
22338021-C-T | 20176135-C-T | DYZ19 | *** | |||||
22354237-C-A | 20192351-C-A | DYZ19 | *** | |||||
22355523-T-G | 20193637-T-G | DYZ19 | *** | |||||
22355531-T-A | 20193645-T-A | DYZ19 | *** | |||||
22355537-A-C | 20193651-A-C | DYZ19 | *** | |||||
22355557-C-G | 20193671-C-G | DYZ19 | *** | |||||
22355565-A-G | 20193679-A-G | DYZ19 | *** | |||||
22359986-T-C | 20198100-T-C | DYZ19 | *** | |||||
22364969-C-G | 20203083-C-G | DYZ19 | *** | |||||
22365122-T-A | 20203236-T-A | DYZ19 | *** | |||||
22365770-A-T | 20203884-A-T | DYZ19 | *** | |||||
22365775-T-G | 20203889-T-G | DYZ19 | *** | |||||
22365782-A-T | 20203896-A-T | DYZ19 | *** | |||||
22420553-A-T | 20258667-A-T | DYZ19 | *** | |||||
22421346-G-T | 20259460-G-T | DYZ19 | *** | |||||
22421378-G-A | 20259492-G-A | DYZ19 | *** | |||||
22421503-G-A | 20259617-G-A | DYZ19 | *** | |||||
22421510-C-T | 20259624-C-T | DYZ19 | *** | |||||
22421529-T-A | 20259643-T-A | DYZ19 | *** | |||||
22421955-C-G | 20260069-C-G | DYZ19 | *** | |||||
22479109-G-A | 20317223-G-A | DYZ19 | *** | |||||
22488489-G-T | 20326603-G-T | DYZ19 | *** | |||||
22488560-T-G | 20326674-T-G | DYZ19 | *** | |||||
22491380-C-T | 20329494-C-T | DYZ19 | *** | |||||
22491381-A-C | 20329495-A-C | DYZ19 | *** | |||||
22491820-G-T | 20329934-G-T | DYZ19 | *** | |||||
22495932-G-T | 20334046-G-T | DYZ19 | *** | |||||
22503805-G-A | 20341919-G-A | DYZ19 | *** | |||||
22996977-T-C | 20835091-T-C | *** | ||||||
23110819-G-A | 20948933-G-A | *** | ||||||
24262388-G-T | 22116241-G-T | P3_b1 | *** | |||||
24262390-A-T | 22116243-A-T | P3_b1 | *** | |||||
24262391-A-T | 22116244-A-T | P3_b1 | *** | |||||
24262393-A-T | 22116246-A-T | P3_b1 | *** | |||||
24262394-C-T | 22116247-C-T | P3_b1 | *** | |||||
24262396-C-T | 22116249-C-T | P3_b1 | *** | |||||
24262419-A-T | 22116272-A-T | P3_b1 | *** | |||||
24262424-C-T | 22116277-C-T | P3_b1 | *** | |||||
24273720-G-A | 22127573-G-A | P3_b1 | *** | |||||
24273722-G-A | 22127575-G-A | P3_b1 | *** | |||||
24329090-A-C | 22182943-A-C | P3_t1 | *** | |||||
25568755-C-T | 23422608-C-T | P1_gr1 | *** | |||||
25588170-G-T | 23442023-G-T | P1_gr1 | *** | |||||
25865186-G-A | 23719039-G-A | P1_Y1 | *** | |||||
25865222-A-G | 23719075-A-G | P1_Y1 | *** | |||||
25907837-A-T | 23761690-A-T | P1_Y1 | *** | |||||
25998043-T-A | 23851896-T-A | P1_Y1 | *** | |||||
25998071-G-T | 23851924-G-T | P1_Y1 | *** | |||||
26040895-A-C | 23894748-A-C | P1_Y1 | *** | |||||
26040897-A-T | 23894750-A-T | P1_Y1 | *** | |||||
26248380-T-C | 24102233-T-C | P1_Y1 | *** | |||||
26248388-T-G | 24102241-T-G | P1_Y1 | *** | |||||
26372700-A-G | 24226553-A-G | P1_Y1 | *** | |||||
26637934-T-A | 24491787-T-A | P1_g2 | *** | |||||
26699430-C-T | 24553283-C-T | P1_g2 | *** | |||||
26846895-A-G | 24700748-A-G | P1_r3 | *** | |||||
26846897-A-T | 24700750-A-T | P1_r3 | *** | |||||
26846898-T-C | 24700751-T-C | P1_r3 | *** | |||||
26846899-G-T | 24700752-G-T | P1_r3 | *** | |||||
27078005-G-C | 24931858-G-C | P1_r4 | *** | |||||
27156616-A-T | 25010469-A-T | P1_g3 | *** | |||||
27156634-T-A | 25010487-T-A | P1_g3 | *** | |||||
27201163-G-T | 25055016-G-T | P1_g3 | *** | |||||
27201164-G-T | 25055017-G-T | P1_g3 | *** | |||||
27201224-A-T | 25055077-A-T | P1_g3 | *** | |||||
27201230-C-T | 25055083-C-T | P1_g3 | *** | |||||
27287129-G-A | 25140982-G-A | P1_g3 | *** | |||||
27306817-G-T | 25160670-G-T | P1_g3 | *** | |||||
27340262-T-A | 25194115-T-A | P1_g3 | *** | |||||
27340264-T-A | 25194117-T-A | P1_g3 | *** | |||||
27416044-T-A | 25269897-T-A | P1_g3 | *** | |||||
27416054-G-T | 25269907-G-T | P1_g3 | *** | |||||
27462488-T-C | 25316341-T-C | P1_Y2 | 15×AC | *** | ||||
27480771-G-A | 25334624-G-A | P1_Y2 | *** | |||||
27480774-G-A | 25334627-G-A | P1_Y2 | *** | |||||
27480775-G-A | 25334628-G-A | P1_Y2 | *** | |||||
27480794-G-A | 25334647-G-A | P1_Y2 | *** | |||||
27480795-G-A | 25334648-G-A | P1_Y2 | *** | |||||
27637398-C-T | 25491251-C-T | FGC28051 | P1_Y2 | *** | ||||
27814553-T-C | 25668406-T-C | P1_Y2 | *** | |||||
27814557-G-C | 25668410-G-C | P1_Y2 | *** | |||||
27821172-C-G | 25675025-C-G | P1_Y2 | *** | |||||
27957310-T-A | 25811163-T-A | P1_Y2 | *** | |||||
27957329-A-T | 25811182-A-T | P1_Y2 | *** | |||||
27998517-G-A | 25852370-G-A | P1_Y2 | *** | |||||
28385770-T-G | 26239623-T-G | P1_gr2 | *** | |||||
28819079-G-A | 26672932-G-A | *** | ||||||
28819087-C-A | 26672940-C-A | *** | ||||||
28819093-G-A | 26672946-G-A | *** | ||||||
28819096-T-A | 26672949-T-A | *** | ||||||
58824588-C-T | 56766283-G-A | *** | ||||||
58824590-T-A | 56766281-A-T | *** | ||||||
58825134-C-T | 56765737-G-A | *** | ||||||
58830708-C-T | 56760163-G-A | *** | ||||||
58830711-A-T | 56760160-T-A | *** | ||||||
58830733-C-T | 56760138-G-A | *** | ||||||
58830768-C-T | 56760103-G-A | *** | ||||||
58830877-G-T | 56759994-C-A | *** | ||||||
58830888-C-A | 56759983-G-T | *** | ||||||
58840368-T-C | 56750503-A-G | *** | ||||||
58840369-G-T | 56750502-C-A | *** | ||||||
58840697-T-A | 56750174-A-T | *** | ||||||
58840736-A-C | 56750135-T-G | *** | ||||||
58843150-C-A | 56747721-G-T | *** | ||||||
58843589-C-G | 56747282-G-C | *** | ||||||
58844313-T-A | 56746558-A-T | *** | ||||||
58844318-T-G | 56746553-A-C | *** | ||||||
58849078-T-A | 56741793-A-T | *** | ||||||
58851980-A-T | 56738891-T-A | *** | ||||||
58854287-C-A | 56736584-G-T | *** | ||||||
58862458-C-T | 56728413-G-A | *** | ||||||
58867426-T-A | 56723445-A-T | *** | ||||||
58870601-A-C | 56720270-T-G | *** | ||||||
58876490-G-C | 56714381-C-G | *** | ||||||
58879392-C-T | 56711479-G-A | 4×CCATT | *** | |||||
58879408-C-T | 56711463-G-A | *** | ||||||
58882191-A-T | 56708680-T-A | *** | ||||||
58885040-C-T | 56705831-G-A | *** | ||||||
58890443-T-C | 56700428-A-G | *** | ||||||
58893150-C-G | 56697721-G-C | *** | ||||||
58893294-C-T | 56697577-G-A | *** | ||||||
58895453-A-G | 56695418-T-C | *** | ||||||
58909188-T-C | 56681683-A-G | *** | ||||||
22355142-GGT-AGG | 20193256-GGT-AGG | DYZ19 | *** | |||||
23045488-C-AA | 20883602-C-AA | *** | ||||||
3550573-TC-CA | 3682532-TC-CA | *** | ||||||
5211296-CTTTT-C | 5343255-CTTTT-C | 16×T | *** | |||||
5479923-GTTTC-ATTTT | 5611882-GTTTC-ATTTT | *** | ||||||
5479933-CCGGTCT-ACCATCG | 5611892-CCGGTCT-ACCATCG | *** | ||||||
6456182-AAG-A | 6588141-AAG-A | *** | ||||||
8535204-G-GTTT | 8667163-G-GTTT | 19×T | *** | |||||
8776547-C-CGGATTTTTTTTT | 8908506-C-CGGATTTTTTTTT | 24×T | *** | |||||
9330717-GG-AT | 9493108-GG-AT | *** | ||||||
9342743-CCC-GGA | 9505134-CCC-GGA | *** | ||||||
9429480-T-TTAAAAA | 9591871-T-TTAAAAA | 18×A | *** | |||||
10037525-GTA-CTG | 10199916-GTA-CTG | *** | ||||||
10090755-AAAG-CAAA | 10253146-AAAG-CAAA | *** | ||||||
13140069-CACTCGAGTGCGTGTGATTCCATTAAATCAGA-C | 10629555-CACTCGAGTGCGTGTGATTCCATTAAATCAGA-C | *** | ||||||
13464507-TTCT-GTCC | 11308831-TTCT-GTCC | *** | ||||||
13467545-CAGA-TAGG | 11311869-CAGA-TAGG | *** | ||||||
13467564-CT-AC | 11311888-CT-AC | *** | ||||||
13468648-C-CA | 11312972-C-CA | *** | ||||||
13472064-TGG-CGA | 11316388-TGG-CGA | *** | ||||||
13476910-TTCAGCA-CTCACTG | 11321234-TTCAGCA-CTCACTG | *** | ||||||
13480156-CCCG-GCCA | 11324480-CCCG-GCCA | *** | ||||||
13483742-CTGT-ATGA | 11328066-CTGT-ATGA | *** | ||||||
13488952-TC-CA | 11333276-TC-CA | *** | ||||||
13488969-GGCC-AGCG | 11333293-GGCC-AGCG | *** | ||||||
13548815-T-TG | 11393139-T-TG | *** | ||||||
15171226-C-CTTT | 13059312-C-CTTT | 19×T | *** | |||||
15904149-C-CAAA | 13792269-C-CAAA | 20×A | *** | |||||
16242402-C-CTTTTTTT | 14130522-C-CTTTTTTT | 18×T | *** | |||||
16336897-G-GGTTTTTTTT | 14225017-G-GGTTTTTTTT | 23×T | *** | |||||
16344404-C-CTTCTTG | 14232524-C-CTTCTTG | *** | ||||||
16344406-T-TCTTCTC | 14232526-T-TCTTCTC | *** | ||||||
16344407-C-CTTCTTA | 14232527-C-CTTCTTA | *** | ||||||
16729172-G-GTT | 14617292-G-GTT | 22×T | *** | |||||
22248503-CC-TA | 20086617-CC-TA | DYZ19 | *** | |||||
22292440-AT-CC | 20130554-AT-CC | DYZ19 | *** | |||||
22292495-GT-CA | 20130609-GT-CA | DYZ19 | *** | |||||
22292504-CCAGAGTT-TTAGATTG | 20130618-CCAGAGTT-TTAGATTG | DYZ19 | *** | |||||
22328421-TATAA-GATCT | 20166535-TATAA-GATCT | DYZ19 | *** | |||||
22337792-CAGT-TAGG | 20175906-CAGT-TAGG | DYZ19 | *** | |||||
22355195-CAA-AAG | 20193309-CAA-AAG | DYZ19 | *** | |||||
22355517-GA-CC | 20193631-GA-CC | DYZ19 | *** | |||||
22355574-CAGACC-AAGAAT | 20193688-CAGACC-AAGAAT | DYZ19 | *** | |||||
22360059-GG-TT | 20198173-GG-TT | DYZ19 | *** | |||||
22364943-CATCTTTAATGAAGC-TTTCAAGAATTAAGT | 20203057-CATCTTTAATGAAGC-TTTCAAGAATTAAGT | DYZ19 | *** | |||||
22364977-TC-GG | 20203091-TC-GG | DYZ19 | *** | |||||
22365758-GTTTTTTACATCA-ATTTGTTCCTTCT | 20203872-GTTTTTTACATCA-ATTTGTTCCTTCT | DYZ19 | *** | |||||
22457188-TTTCG-GTTCA | 20295302-TTTCG-GTTCA | DYZ19 | *** | |||||
22479024-TTT-AAG | 20317138-TTT-AAG | DYZ19 | *** | |||||
22479046-CTG-GTC | 20317160-CTG-GTC | DYZ19 | *** | |||||
22482591-ATTG-CTTT | 20320705-ATTG-CTTT | DYZ19 | *** | |||||
22491377-T-TA | 20329491-T-TA | DYZ19 | *** | |||||
22491380-CA-TC | 20329494-CA-TC | DYZ19 | *** | |||||
22496172-TGTGG-AGTGA | 20334286-TGTGG-AGTGA | DYZ19 | *** | |||||
23364087-CAAAAAA-C | 21202201-CAAAAAA-C | 16×A | *** | |||||
24904674-G-GTTTTTTTTT | 22758527-G-GTTTTTTTTT | g1 | 21×T | *** | ||||
26060208-GACT-AA | 23914061-GACT-AA | P1_Y1 | *** | |||||
26228689-C-CTTTTTTT | 24082542-C-CTTTTTTT | P1_Y1 | 27×T | *** | ||||
26846894-AAAATG-CGATCT | 24700747-AAAATG-CGATCT | P1_r3 | *** | |||||
27078005-GACAGACAG-CACACACAC | 24931858-GACAGACAG-CACACACAC | P1_r4 | *** | |||||
27398510-C-CAAAAAAAAAA | 25252363-C-CAAAAAAAAAA | P1_g3 | 23×A | *** | ||||
27971726-C-CAAAAAA | 25825579-C-CAAAAAA | P1_Y2 | 27×A | *** | ||||
28545880-CAAAAAAAA-C | 26399733-CAAAAAAAA-C | 20×A | *** | |||||
58840387-TTTC-ATTT | 56750481-GAAA-AAAT | *** | ||||||
58843642-GC-TT | 56747228-GC-AA | *** | ||||||
58843675-CGTTTCA-AATGATT | 56747190-TGAAACG-AATCATT | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.