Big Tree: Person Data

Tree Position

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Blocks	Names	Region	McDonald BED	combBED	STR	1kG HG02982
6108926-G-A	6240885-G-A	FGC9595	FGC9591 ZP54					+
6847842-G-C	6979801-G-C		V150		Y	Y		+
13821987-C-T	11701281-C-T		BY47120					+
14096805-C-T	11976099-C-T	PR4692	BY4105		Y	Y		+
8354783-G-A	8486742-G-A		A1369		Y	Y		+
6794834-C-T	6926793-C-T		BY61350		Y	Y		+
14722624-G-T	12610692-G-T				Y	Y		+
16547464-T-A	14435584-T-A		BY48819 FT63365		Y	Y		+
17244528-C-T	15132648-C-T		FGC31173		Y			+
21419177-C-T	19257291-C-T		FT331562		Y			+
28507965-C-T	26361818-C-T		FT332970					+
3147666-C-T	3279625-C-T		Z8497					+
3859766-C-G	3991725-C-G		FT132587					+
4914241-A-G	5046200-A-G							+
9955707-G-A	10118098-G-A		FT399510		Y			+
22179271-G-A	20017385-G-A		PH5071		Y	Y		+
22443940-G-A	20282054-G-A		BY50091	DYZ19				+
22480172-C-T	20318286-C-T		BY47368	DYZ19				+
22271582-A-T	20109696-A-T		BY215214	DYZ19				+
6868881-C-T	7000840-C-T		V153		Y	Y		+
2670196-A-G	2802155-A-G		FT132290		Y			+
2673284-T-G	2805243-T-G		FT315350		Y			+
2717950-T-A	2849909-T-A		FTA5788		Y	Y		+
2813732-G-T	2945691-G-T				Y	Y		+
2820406-A-T	2952365-A-T		FT315390		Y	Y		+
2900664-G-A	3032623-G-A		FT294599		Y			+
2943690-G-A	3075649-G-A		FT315501					+
2950432-T-G	3082391-T-G		FT132334					+
3039094-A-G	3171053-A-G		FT132360					+
3042903-T-C	3174862-T-C							+
3056306-G-A	3188265-G-A		FT132362					+
3063408-C-T	3195367-C-T		FT315925					+
3065914-A-G	3197873-A-G		FT132365					+
3070183-A-T	3202142-A-T							+
3093355-C-T	3225314-C-T		FT132370					+
3128206-G-A	3260165-G-A		FT316182					+
3211118-T-C	3343077-T-C		FT132395					+
3309265-C-T	3441224-C-T		FT316786					+
3324261-C-T	3456220-C-T		FT132432					+
3332812-A-G	3464771-A-G		FT316844					+
3391070-C-T	3523029-C-T		FT132443					+
3422179-C-T	3554138-C-T		FT132456					+
3437028-G-C	3568987-G-C		FT317241					+
3463474-C-T	3595433-C-T		FT132468					+
3463550-C-T	3595509-C-T		FT38420					+
3559910-A-G	3691869-A-G		Z8520					+
3654512-C-T	3786471-C-T		FT135646					+
3662716-C-T	3794675-C-T		FT132516					+
3674629-A-G	3806588-A-G		FT318095					+
3758431-T-C	3890390-T-C		FT132551					+
3808354-T-A	3940313-T-A		FT132572					+
3817481-A-G	3949440-A-G		Z8541					+
3981856-C-A	4113815-C-A		FT132625					+
3998039-T-A	4129998-T-A		FT132631					+
4119543-T-G	4251502-T-G		FT319576					+
4129323-T-A	4261282-T-A		FT319611					+
4148833-G-C	4280792-G-C		Z8560					+
4154038-T-C	4285997-T-C		FT319707					+
4164530-C-G	4296489-C-G		FT319738					+
4166852-G-A	4298811-G-A		FT319744					+
4186147-T-C	4318106-T-C		FT132677					+
4187795-G-C	4319754-G-C		FT132678					+
4189465-A-G	4321424-A-G		FT80435					+
4229166-G-C	4361125-G-C		FT132689					+
4255992-T-C	4387951-T-C		FT132697					+
4318979-G-C	4450938-G-C		FT82784					+
4374165-A-G	4506124-A-G							+
4454594-T-C	4586553-T-C		FT132756					+
4532834-T-A	4664793-T-A							+
4710388-A-G	4842347-A-G		FT132845					+
4710987-A-G	4842946-A-G		FT132847					+
4733557-G-A	4865516-G-A		FT132853					+
4740361-A-G	4872320-A-G							+
4806334-C-T	4938293-C-T		FT321784					+
4813981-G-A	4945940-G-A		FT132868					+
4838026-C-G	4969985-C-G		FT132875					+
4852432-T-G	4984391-T-G		FT132878					+
4871136-C-G	5003095-C-G		FT132885					+
4887352-C-T	5019311-C-T		FT39236 FT132887					+
4887720-A-G	5019679-A-G		FT322017					+
4989622-C-A	5121581-C-A		FT132902					+
4993932-G-T	5125891-G-T		FT132904					+
5064083-G-A	5196042-G-A		FT132921					+
5088921-A-G	5220880-A-G		FT322682					+
5106295-T-C	5238254-T-C							+
5121934-G-A	5253893-G-A		FGC8697					+
5181468-A-G	5313427-A-G		FT323008					+
5185055-G-A	5317014-G-A		FT132954					+
5198492-T-G	5330451-T-G		FT323057					+
5269493-T-G	5401452-T-G		FT323332					+
5294598-G-A	5426557-G-A		FT132985					+
5312792-A-G	5444751-A-G		FT132988					+
5327223-G-C	5459182-G-C		FT132992					+
5332209-C-T	5464168-C-T		FT323569					+
5371065-C-T	5503024-C-T		FT133005					+
5403879-A-T	5535838-A-T		FT133017					+
5439595-T-C	5571554-T-C		FT133024					+
5485780-C-T	5617739-C-T		FT324062					+
5488903-A-C	5620862-A-C		FT324069					+
5503614-G-C	5635573-G-C		FT133041					+
5524403-G-C	5656362-G-C		FT324189					+
5527282-G-A	5659241-G-A		FT133048					+
5582333-G-A	5714292-G-A		FT133069					+
5589783-A-C	5721742-A-C		Z8648					+
5605649-C-T	5737608-C-T		FT133074					+
5605883-A-G	5737842-A-G		FT324464					+
5612160-T-C	5744119-T-C		FT133081					+
5641096-C-T	5773055-C-T		FT133089					+
5719389-A-G	5851348-A-G		FT133114					+
5815523-G-C	5947482-G-C		Z8663					+
5816412-T-C	5948371-T-C		FT133148					+
5833090-C-T	5965049-C-T		FT133153					+
5850316-A-G	5982275-A-G		FGC69807					+
5879223-A-G	6011182-A-G		FT133166					+
5903168-A-G	6035127-A-G							+
5906432-T-C	6038391-T-C		FT133175					+
5931884-T-A	6063843-T-A		FT325539					+
5932958-G-T	6064917-G-T		FT133183					+
5959479-G-A	6091438-G-A		FT133197					+
6056970-A-G	6188929-A-G		FT325993					+
6078709-C-A	6210668-C-A		FT326071					+
6086524-A-T	6218483-A-T		FT133237				4×AAAC	+
6098903-T-C	6230862-T-C		FT133244					+
6100865-A-C	6232824-A-C		Z8688					+
6115354-T-C	6247313-T-C							+
6140410-C-T	6272369-C-T		BY46914	IR3_Dst				+
6154305-T-A	6286264-T-A		BY59348	IR3_Dst				+
6423023-A-G	6554982-A-G		FT133270					+
6455048-A-C	6587007-A-C		FT133279					+
6493928-G-A	6625887-G-A		FT133289					+
6505256-A-T	6637215-A-T		FT133290					+
6611741-A-T	6743700-A-T		Z8704					+
6618995-G-A	6750954-G-A		FT133315		Y			+
6683637-A-T	6815596-A-T		FT327023		Y			+
6751144-C-G	6883103-C-G		FT327039		Y			+
6752471-A-G	6884430-A-G				Y	Y		+
6829701-A-G	6961660-A-G		FT133338		Y			+
6877314-G-A	7009273-G-A		V158		Y	Y		+
6931670-T-C	7063629-T-C		L1073		Y	Y		+
6932829-G-A	7064788-G-A		V159		Y	Y		+
6936753-G-A	7068712-G-A		PH321		Y	Y		+
6968743-A-T	7100702-A-T		PH352		Y	Y		+
6992144-G-A	7124103-G-A		PH376		Y	Y		+
6994592-C-G	7126551-C-G		BY46719		Y	Y		+
7003832-T-G	7135791-T-G		FTA5806		Y			+
7027584-G-T	7159543-G-T		FTC531		Y			+
7038092-G-C	7170051-G-C		BY48122		Y	Y		+
7041056-C-A	7173015-C-A		FTA5809		Y			+
7059995-A-G	7191954-A-G		FT327132		Y			+
7105582-G-T	7237541-G-T		PH429		Y	Y		+
7150738-A-G	7282697-A-G		PH461		Y	Y		+
7263187-C-T	7395146-C-T		BY46928		Y	Y		+
7267116-G-A	7399075-G-A		FT327216		Y	Y		+
7289319-C-T	7421278-C-T		Y45863		Y	Y		+
7303595-G-C	7435554-G-C		FT327227		Y			+
7308774-G-T	7440733-G-T		PH592		Y	Y		+
7313631-G-A	7445590-G-A				Y	Y		+
7343600-T-C	7475559-T-C		FT327248		Y			+
7380237-C-T	7512196-C-T		FT133425		Y			+
7394396-G-A	7526355-G-A				Y			+
7400650-A-G	7532609-A-G		BY45872		Y	Y		+
7404807-T-G	7536766-T-G		BY49419		Y	Y		+
7433187-A-C	7565146-A-C		PH657		Y			+
7583448-C-A	7715407-C-A		L987		Y	Y		+
7676576-G-T	7808535-G-T		FT327327		Y	Y		+
7702166-G-A	7834125-G-A				Y	Y		+
7708730-A-G	7840689-A-G		BY67072		Y	Y		+
7716836-T-G	7848795-T-G		FT141952		Y	Y		+
7719558-A-G	7851517-A-G		BY67104		Y	Y		+
7755656-G-A	7887615-G-A		FT327345		Y	Y		+
7767068-G-A	7899027-G-A		BY47519		Y	Y		+
7778653-A-G	7910612-A-G		FT327352		Y	Y		+
7785509-C-T	7917468-C-T		FT327356		Y	Y		+
7788568-A-T	7920527-A-T		BY46237		Y	Y		+
7797005-A-G	7928964-A-G		V1440		Y	Y		+
7865442-C-T	7997401-C-T				Y	Y		+
7866416-C-T	7998375-C-T		BY46940		Y	Y		+
7912553-C-A	8044512-C-A		FT327391		Y	Y		+
7914072-C-T	8046031-C-T		BY68723		Y	Y		+
7916848-A-G	8048807-A-G		FT327395		Y	Y		+
7941652-G-A	8073611-G-A		BY47524		Y	Y		+
7994360-A-C	8126319-A-C		FT133497		Y	Y		+
8010231-C-A	8142190-C-A		BY46453		Y	Y		+
8143152-A-G	8275111-A-G		BY45882		Y	Y		+
8146059-A-G	8278018-A-G		FT327465		Y	Y		+
8161806-C-G	8293765-C-G		V1681		Y	Y		+
8172935-C-T	8304894-C-T		BY46943		Y	Y		+
8184735-A-C	8316694-A-C				Y	Y		+
8246889-T-C	8378848-T-C		BY49041		Y	Y		+
8255141-C-T	8387100-C-T		BY46944		Y	Y		+
8307989-C-T	8439948-C-T		V1796		Y	Y		+
8329742-C-T	8461701-C-T		BY46945		Y	Y		+
8344194-C-T	8476153-C-T		BY71853		Y			+
8384386-G-A	8516345-G-A		V1854		Y			+
8400419-T-C	8532378-T-C		BY49044		Y	Y		+
8407660-C-T	8539619-C-T		BY46948		Y	Y		+
8410624-C-T	8542583-C-T		BY46949		Y	Y		+
8411227-G-T	8543186-G-T		BY48362		Y	Y		+
8432962-G-A	8564921-G-A		FGC14811		Y	Y		+
8435204-G-A	8567163-G-A		V1969		Y	Y		+
8446040-T-A	8577999-T-A		V1999		Y	Y		+
8454612-T-G	8586571-T-G		FT327555		Y	Y		+
8463592-A-G	8595551-A-G		FT327559		Y	Y		+
8466078-C-G	8598037-C-G		V2045		Y	Y		+
8495110-A-C	8627069-A-C		FTA5858		Y	Y		+
8528783-G-A	8660742-G-A		V2179		Y	Y		+
8534524-T-C	8666483-T-C		V2191		Y	Y		+
8606954-C-T	8738913-C-T		BY46959		Y	Y		+
8647665-T-A	8779624-T-A		BY48745		Y	Y		+
8650105-A-C	8782064-A-C		Z8885		Y	Y		+
8650873-A-T	8782832-A-T		BY46239		Y	Y		+
8672892-G-A	8804851-G-A		FT133605		Y	Y		+
8742876-T-A	8874835-T-A		BY48746		Y	Y		+
8853589-T-G	8985548-T-G		FT327703		Y	Y		+
8861478-G-C	8993437-G-C		BY48131		Y	Y		+
8900205-C-T	9032164-C-T		BY46968			Y		+
8911331-C-T	9043290-C-T		BY46970					+
8984207-G-A	9146598-G-A		FT133650					+
8999188-C-T	9161579-C-T		BY46973			Y		+
9010953-A-G	9173344-A-G		BY45898			Y		+
9071021-T-C	9233412-T-C		BY49055			Y		+
9096166-C-A	9258557-C-A		FT327821			Y		+
9108113-C-T	9270504-C-T		BY78154			Y		+
9124308-C-A	9286699-C-A		BY46461			Y		+
9124416-A-C	9286807-A-C		BY45695			Y		+
9138052-C-A	9300443-C-A		BY46463			Y		+
9145762-A-G	9308153-A-G		BY45901			Y		+
9163530-G-C	9325921-G-C		FT133685					+
9163801-C-T	9326192-C-T		FT327849					+
9172304-C-A	9334695-C-A				Y			+
9377734-T-G	9540125-T-G		BY49425		Y			+
9384702-G-A	9547093-G-A		BY47550		Y			+
9395842-C-A	9558233-C-A		BY46465		Y	Y		+
9411381-G-A	9573772-G-A		FT327930		Y			+
9427112-G-C	9589503-G-C		BY48136		Y	Y		+
9767856-T-G	9930247-T-G		FT133715		Y			+
9779157-G-A	9941548-G-A				Y			+
9841533-A-C	10003924-A-C		FT328341		Y	Y		+
9912864-T-C	10075255-T-C		FT262814		Y			+
9921278-G-T	10083669-G-T		FT399504		Y			+
9927793-A-G	10090184-A-G		BY45912		Y			+
9950571-C-T	10112962-C-T		FT258083		Y			+
9956483-C-T	10118874-C-T		FT262807		Y			+
9964040-C-T	10126431-C-T		FT399507		Y			+
9976660-T-C	10139051-T-C		FT399500		Y			+
10003552-G-A	10165943-G-A		FT399509		Y			+
10004612-A-G	10167003-A-G				Y			+
10008476-C-T	10170867-C-T		BY46997		Y			+
10008706-C-T	10171097-C-T		BY46998		Y			+
10034580-C-G	10196971-C-G		FT399494		Y			+
10039817-C-G	10202208-C-G		FT292857					+
10041766-G-A	10204157-G-A							+
10047758-A-T	10210149-A-T		FT205924					+
10082260-T-A	10244651-T-A		FT262809					+
13196035-C-T	11040359-C-T							+
13231674-A-C	11075998-A-C							+
13231926-A-C	11076250-A-C		FT399495					+
13234114-C-T	11078438-C-T		BY47047					+
13237103-C-T	11081427-C-T		BY42304					+
13244998-A-T	11089322-A-T							+
13257653-G-A	11101977-G-A		FT262862					+
13283877-T-A	11128201-T-A							+
13311933-G-A	11156257-G-A							+
13336252-C-T	11180576-C-T							+
13359287-T-G	11203611-T-G							+
13413426-T-G	11257750-T-G							+
13429959-T-C	11274283-T-C							+
13431419-G-T	11275743-G-T							+
13438627-G-A	11282951-G-A							+
13438717-G-A	11283041-G-A		FGC41019					+
13453277-T-TCCATG	11297601-T-TCCATG							+
13460052-C-A	11304376-C-A		FT399513					+
13510449-C-G	11354773-C-G		FT399496					+
13517249-A-T	11361573-A-T							+
13535436-A-C	11379760-A-C		FT292861					+
13569437-G-T	11413761-G-T							+
13582802-G-C	11427126-G-C		BY86503					+
13586106-G-T	11430430-G-T		FT399511					+
13587512-C-G	11431836-C-G		FT399503					+
13589753-G-A	11434077-G-A		FT262812					+
13599872-A-G	11444196-A-G		BY45958					+
13610569-G-A	11454893-G-A		FT446465					+
13623733-G-T	11468057-G-T							+
13646760-C-T	11491084-C-T							+
13648111-G-C	11492435-G-C		BY48164					+
13660806-T-G	11505130-T-G		FGC24719					+
13668666-A-C	11512990-A-C		FT399497					+
13692588-A-G	11536912-A-G		BY88732					+
13693997-G-T	11538321-G-T		BY88832					+
13815848-T-C	11695142-T-C		FT328478					+
13818114-A-G	11697408-A-G		FT133740					+
13821467-C-T	11700761-C-T		FT328515					+
13823809-G-C	11703103-G-C		BY48188					+
13829940-G-A	11709234-G-A		BY47716					+
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21516912-G-C	19355026-G-C		FT331601		Y	Y		+
21545485-G-A	19383599-G-A		FT331621		Y	Y		+
21567404-G-A	19405518-G-A		FT224906		Y	Y		+
21567405-C-T	19405519-C-T		FT331641		Y	Y		+
21584575-C-T	19422689-C-T		FT134730		Y			+
21590071-G-C	19428185-G-C		BY48215		Y	Y		+
21614658-C-T	19452772-C-T		FT134739		Y	Y		+
21629868-T-C	19467982-T-C		FTA6212		Y			+
21676702-G-T	19514816-G-T		FT331684		Y	Y		+
21678038-C-A	19516152-C-A		FT134748		Y			+
21703228-G-A	19541342-G-A		PH4891		Y	Y		+
21722917-A-G	19561031-A-G		FT51323		Y	Y		+
21737102-A-T	19575216-A-T		PH4916		Y	Y		+
21759320-A-G	19597434-A-G		PH4936		Y	Y		+
21759560-A-T	19597674-A-T		PH4937		Y	Y		+
21795608-T-C	19633722-T-C		FT134766		Y			+
21801613-C-T	19639727-C-T		PH4956		Y	Y		+
21866447-G-A	19704561-G-A		PH4984		Y	Y		+
21893300-T-C	19731414-T-C		L1080		Y	Y		+
21924336-C-G	19762450-C-G		L1017		Y	Y		+
21925174-T-C	19763288-T-C		PH5027		Y	Y		+
21943125-G-C	19781239-G-C				Y			+
21945182-T-G	19783296-T-G		FT331819		Y	Y		+
21967984-T-A	19806098-T-A		FT134797		Y			+
21991372-T-C	19829486-T-C		FT331840		Y	Y		+
21996032-C-T	19834146-C-T		FT331846		Y	Y		+
21997059-C-T	19835173-C-T				Y			+
22054011-A-G	19892125-A-G		FT331871		Y	Y		+
22070083-C-T	19908197-C-T		FT399492		Y	Y		+
22086757-T-C	19924871-T-C		PH5040		Y	Y		+
22134132-G-A	19972246-G-A		FT134828		Y	Y		+
22167102-C-G	20005216-C-G		BY46798		Y	Y		+
22184428-G-C	20022542-G-C		PH5079		Y	Y		+
22193820-G-A	20031934-G-A		FT331920		Y			+
22229770-A-G	20067884-A-G		BY46080	DYZ19				+
22229994-A-T	20068108-A-T		BY46313	DYZ19				+
22242342-C-A	20080456-C-A			DYZ19				+
22251919-G-A	20090033-G-A			DYZ19				+
22262351-G-A	20100465-G-A			DYZ19				+
22278331-C-T	20116445-C-T			DYZ19				+
22278912-C-A	20117026-C-A		BY46610	DYZ19				+
22293897-G-T	20132011-G-T		BY48507	DYZ19				+
22299532-C-T	20137646-C-T			DYZ19				+
22300114-G-C	20138228-G-C		BY48239	DYZ19				+
22302243-T-A	20140357-T-A		BY48883	DYZ19				+
22303806-C-A	20141920-C-A		BY217016	DYZ19				+
22317649-G-A	20155763-G-A			DYZ19				+
22319480-A-C	20157594-A-C			DYZ19				+
22431050-G-T	20269164-G-T		FT456002	DYZ19				+
22442178-G-C	20280292-G-C			DYZ19				+
22442416-T-G	20280530-T-G		BY49523	DYZ19				+
22447998-A-T	20286112-A-T			DYZ19				+
22460457-A-T	20298571-A-T		FT457675	DYZ19				+
22460882-G-A	20298996-G-A			DYZ19				+
22461989-T-A	20300103-T-A		FT399499	DYZ19				+
22463373-G-C	20301487-G-C		FT399508	DYZ19				+
22464510-A-C	20302624-A-C			DYZ19				+
22466450-T-C	20304564-T-C		BY49328	DYZ19				+
22470941-G-A	20309055-G-A		BY47998	DYZ19				+
22471332-A-T	20309446-A-T		Z9694	DYZ19				+
22476222-T-C	20314336-T-C		BY49333	DYZ19				+
22478445-G-A	20316559-G-A	BY22760	BY33057	DYZ19				+
22480464-G-C	20318578-G-C		BY48296	DYZ19				+
22483795-A-T	20321909-A-T			DYZ19				+
22486566-C-G	20324680-C-G		BY51838	DYZ19				+
22506635-C-A	20344749-C-A		BY46684	DYZ19				+
22516383-A-C	20354497-A-C		BY45821		Y			+
22530163-G-A	20368277-G-A		FT331970		Y			+
22547582-T-G	20385696-T-G				Y			+
22571256-C-A	20409370-C-A		FT331987		Y	Y		+
22598184-T-C	20436298-T-C		BY49352		Y	Y		+
22632249-C-T	20470363-C-T		BY47393		Y			+
22654912-G-T	20493026-G-T		FT332020		Y	Y		+
22691660-C-T	20529774-C-T		FT332037		Y			+
22695898-A-G	20534012-A-G				Y			+
22750275-A-G	20588389-A-G		FT332056		Y	Y		+
22764607-T-C	20602721-T-C		FT332069		Y	Y		+
22764652-A-T	20602766-A-T		BY46408		Y	Y		+
22802656-G-A	20640770-G-A		BY48030		Y	Y		+
22827580-T-C	20665694-T-C		PH5223		Y	Y		+
22845508-C-A	20683622-C-A		BY46688		Y	Y		+
22845810-A-C	20683924-A-C		BY45822		Y	Y		+
22875703-G-A	20713817-G-A		BY48034		Y	Y		+
22910087-C-A	20748201-C-A		BY46689		Y	Y		+
22949733-A-G	20787847-A-G		BY46173		Y	Y		+
22958891-C-G	20797005-C-G		BY46869		Y	Y		+
22967515-A-G	20805629-A-G		BY46174		Y	Y		+
23009534-C-G	20847648-C-G		BY142287		Y			+
23048099-C-T	20886213-C-T		FT134922		Y			+
23050970-C-T	20889084-C-T		FT332178		Y			+
23074182-A-G	20912296-A-G		FT332183		Y	Y		+
23086609-G-T	20924723-G-T		FT134930		Y			+
23110674-G-T	20948788-G-T				Y			+
23111102-G-A	20949216-G-A				Y			+
23129014-G-T	20967128-G-T		BY48686		Y	Y		+
23151533-A-G	20989647-A-G		FT332226		Y	Y		+
23171301-G-A	21009415-G-A				Y			+
23191246-C-T	21029360-C-T		FT332247		Y			+
23206339-C-T	21044453-C-T				Y			+
23236285-C-T	21074399-C-T		PH5376		Y			+
23264719-G-A	21102833-G-A		PH5389		Y	Y		+
23265842-T-C	21103956-T-C		BY49360		Y	Y		+
23277016-G-A	21115130-G-A		FT134964		Y			+
23296668-G-A	21134782-G-A		BY48040		Y	Y		+
23332022-A-G	21170136-A-G		Z9789		Y	Y		+
23417696-C-G	21255810-C-G		BY46873		Y	Y		+
23488824-A-T	21326938-A-T		BY145693		Y	Y		+
23498019-G-T	21336133-G-T		BY48689		Y	Y		+
23501342-C-G	21339456-C-G		BY46874		Y	Y		+
23591529-G-C	21429643-G-C		BY48318		Y	Y		+
23610786-C-T	21448900-C-T		BY47410		Y	Y		+
23729735-C-G	21567849-C-G		BY46875					+
23751304-C-A	21589418-C-A		FT332535			Y		+
23763831-T-C	21601945-T-C		BY49368			Y		+
23800810-G-T	21638924-G-T		FT332558			Y		+
23821831-A-T	21659945-A-T		FT151629			Y		+
23836201-T-C	21674315-T-C		BY49369			Y		+
23869085-C-T	21707199-C-T		BY47419			Y		+
23873446-C-T	21711560-C-T		FT177937			Y		+
23971179-G-C	21825032-G-C		FT332685			Y		+
24393902-T-A	22247755-T-A		BY48967			Y		+
24448141-G-A	22301994-G-A		BY48057			Y		+
24636557-C-T	22490410-C-T			P3_t2				+
24874897-G-A	22728750-G-A		BY48059	g1				+
25037309-A-T	22891162-A-T			g1			8×T	+
27334646-C-T	25188499-C-T			P1_g3				+
28479071-A-C	26332924-A-C		FT135068					+
28488055-G-A	26341908-G-A							+
28517537-G-C	26371390-G-C		FT135080					+
28551269-A-C	26405122-A-C							+
28564540-T-C	26418393-T-C							+
28571951-G-A	26425804-G-A							+
28615245-C-T	26469098-C-T							+
28619246-A-G	26473099-A-G		FT333000					+
28629574-C-A	26483427-C-A		FT333009					+
28655095-G-A	26508948-G-A							+
28665974-G-A	26519827-G-A		FT135124					+
28718556-T-C	26572409-T-C							+
28737166-G-A	26591019-G-A							+
28738716-C-T	26592569-C-T		FT135146					+
28739099-C-A	26592952-C-A							+
28747757-C-T	26601610-C-T					Y		+
28805485-A-T	26659338-A-T		BY46425					+
28811616-C-T	26665469-C-T		BY47452					+

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

1k Genomes

Tree Position

Unique Mutations