Stewart

FTDNA: 357625, FGC-BigY: NKEAR
MDKA Birth: Scotland 1769

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > Y16858 > Y17075 > PF5236 > FT129746 > FGC37152

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
357625		FGC-BigY
NKEAR
9376826-G-T 9539217-G-T Z32132 GG116 BY892 Y+***
9376873-T-A 9539264-T-A Y+
9376915-A-G 9539306-A-G Y+
9376933-C-G 9539324-C-G Y+***
10041346-A-T 10203737-A-T **
10041351-A-G 10203742-A-G **
19040919-G-T 16929039-G-T *****
2767790-C-A 2899749-C-A **
2901554-C-A 3033513-C-A **
3407738-C-A 3539697-C-A **
6513400-C-A 6645359-C-A **
7136986-A-G 7268945-A-G **
7282806-T-C 7414765-T-C **
7392556-C-A 7524515-C-A **
7964616-C-A 8096575-C-A **
8076951-C-A 8208910-C-A **
8697588-C-A 8829547-C-A **
8806280-G-T 8938239-G-T **
8913494-C-A 9045453-C-A **
9931634-C-A 10094025-C-A **
10021881-C-A 10184272-C-A **
10029441-A-T 10191832-A-T **
13222036-A-G 11066360-A-G **
13228247-C-A 11072571-C-A FT441377 **
14118380-C-A 11997674-C-A **
14355007-C-A 12234302-C-A **
14720235-C-T 12608303-C-T **
14721585-C-A 12609653-C-A **
14736144-C-A 12624212-C-A **
15477179-C-A 13365299-C-A **
15604936-C-A 13493056-C-A **
15696834-G-A 13584954-G-A **
15950435-C-A 13838555-C-A **
16180845-G-A 14068965-G-A **
16245924-G-T 14134044-G-T FT160505 **
17503679-G-T 15391799-G-T **
18093351-C-A 15981471-C-A **
18401595-T-A 16289715-T-A P6_Gap **
18703317-C-A 16591437-C-A **
18818045-C-A 16706165-C-A **
19066257-C-A 16954377-C-A **
21112158-A-G 18950272-A-G **
21629518-A-G 19467632-A-G **
21950036-T-C 19788150-T-C **
21975051-C-A 19813165-C-A **
21062762-ATGTG-A 18900876-ATGTG-A 17×TG**
24990463-C-T 22844316-C-T g1 10×T***
18325701-ATT-A 16213821-ATT-A P6_Prx 27×T***
20757362-A-T 18595476-A-T P4_Prx 32×T***
22481762-G-A 20319876-G-A DYZ19 ***
22286195-C-G 20124309-C-G DYZ19 ***
13868784-TA-T 11748078-TA-T ***
58834676-C-T 56756195-G-A ***
58974018-TTCCAG-T 56827871-TTCCAG-T ***
22277772-T-C 20115886-T-C ZS4707 DYZ19 ***
10043025-C-G 10205416-C-G ***
10043084-A-T 10205475-A-T ***
18316580-G-A 16204700-G-A P6_Prx ***
13846570-CAG-TAA 11725864-CAG-TAA ***
13858499-AGT-GGA 11737793-AGT-GGA ***
13867840-CTC-TTG 11747134-CTC-TTG ***
18455834-G-GTC 16343954-G-GTC P6_Dst ***
25766541-C-CA 23620394-C-CA P1_b3 16×A***
22357269-G-T 20195383-G-T FGC78741 DYZ19 ***
22481804-T-G 20319918-T-G DYZ19 ***
28149420-C-CT 26003273-C-CT P1_b4 10×T***
24731827-AT-A 22585680-AT-A P3_b2 9×T***
27417717-C-A 25271570-C-A P1_g3 ***
10016751-GTT-ATG 10179142-GTT-ATG ***
22421246-C-G 20259360-C-G S3093 DYZ19 ***
22431738-G-T 20269852-G-T DYZ19 ***
22431801-T-A 20269915-T-A DYZ19 ***
13488789-G-C 11333113-G-C ***
58976210-C-A 56830063-C-A ***
20200587-AT-A 18038701-AT-A P5_Dst 13×T***
4472639-C-T 4604598-C-T ***
13744854-A-T 11589178-A-T ***
22368407-T-A 20206521-T-A DYZ19 ***
58976421-T-C 56830274-T-C ***
22234286-CGAAT-TGAAG 20072400-CGAAT-TGAAG DYZ19 ***
13405153-TT-A 11249477-TT-A ***
22433294-A-G 20271408-A-G DYZ19 ***
13733672-C-T 11577996-C-T ***
13461693-A-G 11306017-A-G ***
13962138-A-T 11841432-A-T ***
24575909-A-C 22429762-A-C P3_t2 ***
26538270-G-A 24392123-G-A P1_g2 ***
13143673-GCAGG-ACAGT 10633159-GCAGG-ACAGT ***
58977613-CTCCTC-TTCCAT 56831466-CTCCTC-TTCCAT ***
25127483-T-G 22981336-T-G g1 ***
27398554-G-A 25252407-G-A P1_g3 ***
9311531-T-G 9473922-T-G ***
13729803-C-T 11574127-C-T ***
18008740-C-T 15896860-C-T P7_Dst ***
26902223-T-A 24756076-T-A P1_r3 ***
13488715-CA-GG 11333039-CA-GG ***
25447269-GGTAGTA-G 23301122-GGTAGTA-G P2_r2 9×GTA***
58980486-ACCA-GCCG 56834339-ACCA-GCCG ***
9344037-A-C 9506428-A-C ***
19727360-A-C 17615480-A-C P5_Prx ***
26880351-A-T 24734204-A-T P1_r3 ***
13858028-TT-CG 11737322-TT-CG ***
20434742-C-T 18272856-C-T P5_Dst ***
24595430-C-G 22449283-C-G P3_t2 ***
24777087-A-C 22630940-A-C P3_b2 ***
25466410-T-G 23320263-T-G P2_r2 ***
27872517-C-A 25726370-C-A P1_Y2 ***
13846911-TATTTATTCG-AATTGTTTCA 11726205-TATTTATTCG-AATTGTTTCA ***
58887352-C-T 56703519-G-A ***
9208907-C-T 9371298-C-T ***
18316605-C-T 16204725-C-T P6_Prx 17×T***
25727456-G-A 23581309-G-A P1_b3 ***
26810744-C-T 24664597-C-T P1_g2 ***
8555570-T-TTTTTG 8687529-T-TTTTTG ***
10042983-C-A 10205374-C-A ***
13436229-A-T 11280553-A-T ***
15183002-C-A 13071088-C-A ***
26991224-G-A 24845077-G-A P1_r4 ***
13461089-TC-AG 11305413-TC-AG ***
27684713-TAC-AAA 25538566-TAC-AAA P1_Y2 ***
19930476-C-T 17818596-C-T P5_Prx 22×T***
21853657-T-A 19691771-T-A ***
28160821-A-T 26014674-A-T P1_b4 ***
25964919-GTA-TTT 23818772-GTA-TTT P1_Y1 ***
58972853-CA-AT 56826706-CA-AT ***
22431808-T-C 20269922-T-C DYZ19 ***
22333950-A-G 20172064-A-G DYZ19 ***
24947116-A-G 22800969-A-G g1 ***
25379460-C-T 23233313-C-T P2_r2 ***
22164567-G-A 20002681-G-A ***
7418767-C-A 7550726-C-A ***
13474514-T-A 11318838-T-A ***
13474528-AGAG-CGAT 11318852-AGAG-CGAT ***
58981044-CAGG-TAGC 56834897-CAGG-TAGC ***
22421191-G-A 20259305-G-A DYZ19 ***
10043094-T-G 10205485-T-G ***
13860037-A-G 11739331-A-G ***
2767730-C-T 2899689-C-T ***
2813599-C-A 2945558-C-A ***
3016045-C-A 3148004-C-A ***
3091855-C-G 3223814-C-G ***
4069745-A-T 4201704-A-T ***
4302098-A-G 4434057-A-G ***
4521586-T-A 4653545-T-A ***
4521837-A-G 4653796-A-G ***
5059695-T-C 5191654-T-C ***
6674857-T-G 6806816-T-G ***
6925100-G-A 7057059-G-A ***
7053814-C-A 7185773-C-A ***
7053831-C-A 7185790-C-A ***
7100861-C-A 7232820-C-A ***
7139370-T-C 7271329-T-C ***
7218281-G-T 7350240-G-T ***
7319034-C-A 7450993-C-A ***
7321739-A-G 7453698-A-G ***
7322673-C-A 7454632-C-A ***
7418589-G-A 7550548-G-A ***
7433459-C-A 7565418-C-A ***
7490732-C-A 7622691-C-A IR1_L ***
7579913-C-A 7711872-C-A ***
7646774-C-A 7778733-C-A ***
7706377-C-A 7838336-C-A ***
7717666-C-T 7849625-C-T 5×TCTT***
7764451-C-A 7896410-C-A ***
7991110-G-A 8123069-G-A ***
8135668-C-A 8267627-C-A ***
8349275-C-A 8481234-C-A ***
8735099-C-A 8867058-C-A ***
9194284-A-C 9356675-A-C ***
9294282-C-A 9456673-C-A ***
9342611-T-C 9505002-T-C ***
9344008-A-C 9506399-A-C ***
9362925-C-A 9525316-C-A ***
9364367-A-C 9526758-A-C ***
9365357-T-G 9527748-T-G ***
9365362-A-G 9527753-A-G ***
9365623-T-G 9528014-T-G ***
9365627-T-G 9528018-T-G ***
9402439-C-A 9564830-C-A ***
9461880-C-A 9624271-C-A FT231205 ***
9518896-T-G 9681287-T-G ***
9524378-C-A 9686769-C-A ***
9540800-T-A 9703191-T-A IR3_Prx ***
9583717-G-T 9746108-G-T IR3_Prx ***
9731647-G-T 9894038-G-T IR3_Prx ***
9865168-A-G 10027559-A-G ***
9952428-C-A 10114819-C-A ***
9964199-C-A 10126590-C-A ***
10088736-A-T 10251127-A-T ***
13131577-C-A 10621063-C-A ***
13135550-C-T 10625036-C-T ***
13258938-C-A 11103262-C-A ***
13457681-C-T 11302005-C-T ***
13457709-T-C 11302033-T-C ***
13457807-T-G 11302131-T-G ***
13461073-C-T 11305397-C-T ***
13480801-T-G 11325125-T-G ***
13480867-C-T 11325191-C-T ***
13480907-C-G 11325231-C-G ***
13481288-G-A 11325612-G-A ***
13486508-C-A 11330832-C-A ***
13488636-G-A 11332960-G-A ***
13488648-C-T 11332972-C-T ***
13641201-T-A 11485525-T-A ***
13652273-G-A 11496597-G-A ***
13733593-T-G 11577917-T-G ***
13737867-A-C 11582191-A-C ***
13737884-A-G 11582208-A-G ***
13744818-G-A 11589142-G-A ***
13744821-A-T 11589145-A-T ***
13799491-A-G 11678785-A-G ***
13859386-A-G 11738680-A-G ***
13860019-A-G 11739313-A-G ***
13866001-A-G 11745295-A-G ***
13919252-C-A 11798546-C-A ***
14022192-T-C 11901486-T-C ***
14046617-C-A 11925911-C-A ***
14089902-C-T 11969196-C-T ***
14106826-A-C 11986120-A-C ***
14174100-G-T 12053394-G-T ***
14391768-C-A 12271064-C-A ***
14507628-C-T 12395833-C-T ***
14511518-T-C 12399723-T-C ***
14562823-C-A 12451023-C-A ***
14639161-C-A 12527230-C-A ***
14774287-C-T 12662356-C-T ***
14784693-C-A 12672763-C-A ***
14785772-A-G 12673842-A-G ***
14815659-C-A 12703730-C-A ***
14825865-A-T 12713932-A-T ***
14989172-T-A 12877238-T-A ***
15038383-C-T 12926473-C-T ***
15497167-A-T 13385287-A-T ***
15532287-C-A 13420407-C-A ***
15619046-C-A 13507166-C-A ***
15778591-C-A 13666711-C-A ***
15928699-C-A 13816819-C-A ***
16059825-C-A 13947945-C-A ***
16084213-C-A 13972333-C-A ***
16090197-T-C 13978317-T-C ***
16107489-G-C 13995609-G-C P8_Prx ***
16107589-C-T 13995709-C-T P8_Prx ***
16292675-C-T 14180795-C-T ***
16379040-C-A 14267160-C-A ***
16417559-C-A 14305679-C-A ***
16450302-C-A 14338422-C-A ***
16479981-C-A 14368101-C-A ***
16520771-A-C 14408891-A-C ***
16865375-T-A 14753495-T-A ***
17128529-C-T 15016649-C-T ***
17144013-A-C 15032133-A-C ***
17388316-C-A 15276436-C-A ***
17389896-A-T 15278016-A-T ***
17478280-C-A 15366400-C-A FT181092 ***
17598116-C-G 15486236-C-G ***
17812238-C-A 15700358-C-A ***
17914471-C-A 15802591-C-A ***
17920816-C-T 15808936-C-T ***
17994772-G-A 15882892-G-A P7_Prx ***
18011039-A-G 15899159-A-G P7_Dst ***
18011053-T-G 15899173-T-G P7_Dst ***
18019125-C-A 15907245-C-A ***
18019209-C-A 15907329-C-A ***
18195945-C-A 16084065-C-A ***
18204978-C-A 16093098-C-A ***
18321254-C-T 16209374-C-T P6_Prx ***
18352981-A-C 16241101-A-C P6_Prx ***
18636718-C-A 16524838-C-A ***
18708090-C-A 16596210-C-A ***
18727127-G-A 16615247-G-A ***
18737481-C-A 16625601-C-A ***
18789586-A-G 16677706-A-G ***
18873455-A-G 16761575-A-G ***
19055517-G-T 16943637-G-T ***
19058046-C-A 16946166-C-A ***
19098648-G-A 16986768-G-A ***
19168442-C-A 17056562-C-A ***
19187509-C-T 17075629-C-T ***
19187529-C-T 17075649-C-T ***
19259072-C-A 17147192-C-A ***
19449287-T-G 17337407-T-G ***
19524723-T-C 17412843-T-C ***
19731001-T-A 17619121-T-A P5_Prx ***
19739822-T-G 17627942-T-G P5_Prx ***
19753354-C-T 17641474-C-T P5_Prx ***
19829349-A-T 17717469-A-T P5_Prx ***
19943078-T-C 17831198-T-C P5_Prx ***
20084194-C-A 17972314-C-A P5_Dst ***
20137713-G-T 18025833-G-T P5_Dst ***
20141085-C-G 18029205-C-G P5_Dst ***
20500970-T-G 18339084-T-G P5_Dst ***
20756229-C-A 18594343-C-A P4_Prx ***
20795835-A-C 18633949-A-C P4_Prx ***
20809476-C-A 18647590-C-A P4_Gap ***
20998238-T-A 18836352-T-A P4_Dst ***
21079166-A-G 18917280-A-G ***
21092161-G-T 18930275-G-T ***
21092166-G-A 18930280-G-A ***
21162245-C-A 19000359-C-A ***
21240576-C-A 19078690-C-A ***
21392389-C-A 19230503-C-A ***
21407137-G-T 19245251-G-T ***
21457381-G-A 19295495-G-A ***
21547377-C-A 19385491-C-A ***
21597212-G-A 19435326-G-A ***
21616190-C-A 19454304-C-A ***
21665614-A-C 19503728-A-C ***
22010288-C-A 19848402-C-A ***
22080001-A-G 19918115-A-G ***
22122873-C-A 19960987-C-A ***
22277808-A-G 20115922-A-G DYZ19 ***
22277811-A-T 20115925-A-T DYZ19 ***
22286151-T-G 20124265-T-G DYZ19 ***
22286172-A-C 20124286-A-C DYZ19 ***
22286236-G-T 20124350-G-T DYZ19 ***
22286258-C-G 20124372-C-G DYZ19 ***
22286290-C-A 20124404-C-A DYZ19 ***
22303515-T-G 20141629-T-G DYZ19 ***
22321176-A-C 20159290-A-C DYZ19 ***
22322202-C-T 20160316-C-T DYZ19 ***
22328388-A-G 20166502-A-G DYZ19 ***
22338626-A-C 20176740-A-C DYZ19 ***
22341324-T-A 20179438-T-A DYZ19 ***
22352482-G-A 20190596-G-A DYZ19 ***
22357023-T-A 20195137-T-A DYZ19 ***
22420935-A-G 20259049-A-G DYZ19 ***
22420987-C-T 20259101-C-T DYZ19 ***
22421182-G-C 20259296-G-C DYZ19 ***
22431775-A-G 20269889-A-G DYZ19 ***
22481228-G-T 20319342-G-T DYZ19 ***
22481628-G-A 20319742-G-A DYZ19 ***
22481633-G-T 20319747-G-T DYZ19 ***
22481691-G-A 20319805-G-A DYZ19 ***
22481719-G-T 20319833-G-T DYZ19 ***
22492637-A-T 20330751-A-T DYZ19 ***
22492656-G-C 20330770-G-C DYZ19 ***
22492694-C-G 20330808-C-G DYZ19 ***
22498106-G-T 20336220-G-T DYZ19 ***
22498131-T-G 20336245-T-G DYZ19 ***
22498135-G-A 20336249-G-A DYZ19 ***
22504755-G-T 20342869-G-T DYZ19 ***
22611212-C-A 20449326-C-A ***
22903655-C-G 20741769-C-G ***
22951276-T-C 20789390-T-C ***
23019977-A-C 20858091-A-C ***
23052926-C-A 20891040-C-A ***
23142037-C-A 20980151-C-A ***
23264045-A-G 21102159-A-G ***
23833134-T-A 21671248-T-A ***
23873368-G-T 21711482-G-T ***
24013790-G-T 21867643-G-T ***
24036632-T-C 21890485-T-C ***
24043874-A-G 21897727-A-G ***
24207437-A-C 22061290-A-C P3_b1 ***
24272128-A-T 22125981-A-T P3_b1 ***
24508351-T-C 22362204-T-C ***
24566440-A-C 22420293-A-C P3_t2 ***
24573454-C-T 22427307-C-T P3_t2 ***
24575930-G-T 22429783-G-T P3_t2 ***
24597864-T-G 22451717-T-G P3_t2 ***
24604296-C-T 22458149-C-T P3_t2 ***
24673348-G-T 22527201-G-T P3_b2 ***
24796956-C-A 22650809-C-A P3_b2 ***
25177008-A-T 23030861-A-T g1 ***
25188187-G-A 23042040-G-A g1 ***
25232117-G-T 23085970-G-T P2_r1 ***
25356934-T-C 23210787-T-C P2_r2 ***
25369707-A-C 23223560-A-C P2_r2 ***
25417566-A-T 23271419-A-T P2_r2 ***
25424594-G-A 23278447-G-A P2_r2 ***
25424622-C-A 23278475-C-A P2_r2 ***
25441122-A-C 23294975-A-C P2_r2 ***
25466392-T-G 23320245-T-G P2_r2 ***
25502605-T-C 23356458-T-C P1_gr1 ***
25524747-A-T 23378600-A-T P1_gr1 ***
25674924-T-C 23528777-T-C P1_b3 ***
25757926-T-A 23611779-T-A P1_b3 ***
25757954-T-A 23611807-T-A P1_b3 ***
25781594-G-T 23635447-G-T P1_b3 ***
25850531-C-A 23704384-C-A P1_Y1 ***
26228811-A-T 24082664-A-T P1_Y1 ***
26260152-G-T 24114005-G-T P1_Y1 ***
26260157-T-G 24114010-T-G P1_Y1 ***
26283242-C-T 24137095-C-T P1_Y1 ***
26366147-G-T 24220000-G-T P1_Y1 ***
26379409-A-C 24233262-A-C P1_Y1 ***
26386396-T-C 24240249-T-C P1_Y1 ***
26399236-A-G 24253089-A-G P1_Y1 ***
26574855-C-A 24428708-C-A P1_g2 ***
26809347-A-C 24663200-A-C P1_g2 ***
26810680-C-A 24664533-C-A P1_g2 ***
26880289-A-T 24734142-A-T P1_r3 ***
26963099-T-G 24816952-T-G P1_r3 ***
26979940-G-A 24833793-G-A P1_r4 ***
26981984-C-A 24835837-C-A P1_r4 ***
26991205-T-A 24845058-T-A P1_r4 ***
26991207-C-A 24845060-C-A P1_r4 ***
26991211-T-A 24845064-T-A P1_r4 ***
26991214-T-A 24845067-T-A P1_r4 ***
27001809-A-C 24855662-A-C P1_r4 ***
27004203-C-T 24858056-C-T P1_r4 ***
27033095-C-T 24886948-C-T P1_r4 17×T***
27082165-C-G 24936018-C-G P1_r4 ***
27120594-G-T 24974447-G-T P1_r4 ***
27254109-C-A 25107962-C-A P1_g3 ***
27273079-G-A 25126932-G-A P1_g3 ***
27330157-C-A 25184010-C-A P1_g3 ***
27417706-C-A 25271559-C-A P1_g3 ***
27417707-T-A 25271560-T-A P1_g3 ***
27861674-G-T 25715527-G-T P1_Y2 ***
27861688-G-T 25715541-G-T P1_Y2 ***
27872508-C-A 25726361-C-A P1_Y2 ***
28104007-G-C 25957860-G-C P1_Y2 ***
28157362-G-C 26011215-G-C P1_b4 ***
28243918-G-A 26097771-G-A P1_b4 ***
28311248-C-A 26165101-C-A P1_b4 ***
28515200-C-A 26369053-C-A ***
28623207-C-A 26477060-C-A ***
28731487-C-A 26585340-C-A ***
28763141-C-A 26616994-C-A ***
58979058-C-A 56832911-C-A ***
7405057-ATAGG-A 7537016-ATAGG-A ***
13461009-CAAGT-TGAGC 11305333-CAAGT-TGAGC ***
23886722-A-AT 21724836-A-AT 13×T***
58982066-AATTCCA-CACTCCT 56835919-AATTCCA-CACTCCT ***
3853806-TTATA-T 3985765-TTATA-T 8×TA***
5433997-A-ATT 5565956-A-ATT ***
8125062-G-GAGAAGAGA 8257021-G-GAGAAGAGA 12×AGAGA***
9365367-AGGC-GGGG 9527758-AGGC-GGGG ***
9580940-CTG-C 9743331-CTG-C IR3_Prx ***
9940742-TAG-CAA 10103133-TAG-CAA ***
13113097-AC-A 10602583-AC-A ***
13323515-AAAATACCG-TAAACA 11167839-AAAATACCG-TAAACA ***
13446514-GCAC-CCAA 11290838-GCAC-CCAA ***
13447668-GCATTC-G 11291992-GCATTC-G 4×CATTC***
13453204-CAC-GAT 11297528-CAC-GAT ***
13461064-AGGC-GGGA 11305388-AGGC-GGGA ***
13480875-GG-AT 11325199-GG-AT ***
13480895-TGTCAC-CATCAA 11325219-TGTCAC-CATCAA ***
13724680-GTG-CTC 11569004-GTG-CTC ***
13729176-TTC-CTG 11573500-TTC-CTG ***
13733346-TGGAATGGAATGTAATGGAA-T 11577670-TGGAATGGAATGTAATGGAA-T ***
13801012-TGCAA-AGAT 11680306-TGCAA-AGAT ***
13801190-AT-CC 11680484-AT-CC ***
13805064-GT-ATCAAACGGAA 11684358-GT-ATCAAACGGAA ***
13847243-GGAA-TGAC 11726537-GGAA-TGAC ***
13856563-AAACGGAA-CAAAGGAG 11735857-AAACGGAA-CAAAGGAG ***
13856582-GG-CA 11735876-GG-CA ***
13858577-ATG-TTC 11737871-ATG-TTC ***
13866106-AT-A 11745400-AT-A ***
13866283-AGAAATGGAA-TGAATTGCAG 11745577-AGAAATGGAA-TGAATTGCAG ***
13866334-CTAGTGT-GGAGTGG 11745628-CTAGTGT-GGAGTGG ***
13868775-TGAAT-CAAAA 11748069-TGAAT-CAAAA ***
14026960-T-TCTAC 11906254-T-TCTAC ***
15070614-CAAAAAA-C 12958705-CAAAAAA-C 20×A***
15076177-ATTC-TTTT 12964267-ATTC-TTTT ***
16627724-GTGTA-ATGTG 14515844-GTGTA-ATGTG ***
17196749-TAGA-AAGG 15084869-TAGA-AAGG 14×AGAA***
19730982-GGT-TGG 17619102-GGT-TGG P5_Prx ***
19847674-ATTTGC-TTTTTT 17735794-ATTTGC-TTTTTT P5_Prx ***
20326037-GCA-TCT 18164151-GCA-TCT P5_Dst ***
20420585-AT-A 18258699-AT-A P5_Dst ***
20434723-CAG-AAA 18272837-CAG-AAA P5_Dst ***
20795860-AGAT-GGAA 18633974-AGAT-GGAA P4_Prx ***
22236364-TTG-CTA 20074478-TTG-CTA DYZ19 ***
22247044-CGTC-GGTT 20085158-CGTC-GGTT DYZ19 ***
22257312-AATTC-CGTTG 20095426-AATTC-CGTTG DYZ19 ***
22341305-CC-TT 20179419-CC-TT DYZ19 ***
22346956-AAAA-TAAT 20185070-AAAA-TAAT DYZ19 ***
22420437-AGTA-GATG 20258551-AGTA-GATG DYZ19 ***
22492629-GC-AG 20330743-GC-AG DYZ19 ***
24043830-AGGT-GGGG 21897683-AGGT-GGGG ***
24677507-AAAC-A 22531360-AAAC-A P3_b2 5×AAC***
24679754-CCA-C 22533607-CCA-C P3_b2 ***
24731747-GT-G 22585600-GT-G P3_b2 ***
24792961-ACTTTCCT-CCTTCCCC 22646814-ACTTTCCT-CCTTCCCC P3_b2 ***
25424574-CT-C 23278427-CT-C P2_r2 17×T***
26280102-AT-A 24133955-AT-A P1_Y1 ***
26814944-T-TA 24668797-T-TA P1_g2 12×A***
27004221-CCTT-C 24858074-CCTT-C P1_r4 ***
27016333-GT-G 24870186-GT-G P1_r4 ***
27095967-ATTTG-TTTTT 24949820-ATTTG-TTTTT P1_r4 ***
27233195-CTTTTTTTGT-C 25087048-CTTTTTTTGT-C P1_g3 ***
27808453-C-CTT 25662306-C-CTT P1_Y2 15×T***
28160781-GTTCTGC-TTTTTGG 26014634-GTTCTGC-TTTTTGG P1_b4 ***
28788038-TAA-AAACCGAG 26641891-TAA-AAACCGAG ***
58883872-C-CCATTG 56706994-G-GAATGC ***
58908917-TTG-CTT 56681952-CAA-AAG ***
58973009-AATTCC-GATTAG 56826862-AATTCC-GATTAG ***
58977171-TTC-CTG 56831024-TTC-CTG ***
58977679-CT-TG 56831532-CT-TG ***
58978664-AAT-CAA 56832517-AAT-CAA ***
58978858-GTCCTC-CTCCAT 56832711-GTCCTC-CTCCAT ***
58978989-G-GCCACTCCTTT 56832842-G-GCCACTCCTTT ***
58979207-GCG-ACA 56833060-GCG-ACA ***
58979269-AC-CT 56833122-AC-CT ***
58980567-TTT-CTC 56834420-TTT-CTC ***
58981165-CT-TG 56835018-CT-TG ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.