Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > Y17075 > PF5236

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
357625
FGC-BigY
NKEAR
22460436-A-C 20298550-A-C FGC37156 DYZ19 +*
7891686-A-G 8023645-A-G FGC37153 YY++
17529089-A-G 15417209-A-G FGC37155 YY++
9376933-C-G 9539324-C-G Y+***
9376826-G-T 9539217-G-T Z32132 GG116 BY892 Y+***
9376915-A-G 9539306-A-G Y+
9376873-T-A 9539264-T-A Y+
8217400-G-A 8349359-G-A FGC37154 YY++
6660080-T-C 6792039-T-C FGC37152 YY++
23607213-C-T 21445327-C-T FGC37157 YY++
8076951-C-A 8208910-C-A **
17029199-C-A 14917319-C-A **
14355007-C-A 12234302-C-A **
8697588-C-A 8829547-C-A **
8806280-G-T 8938239-G-T **
14118380-C-A 11997674-C-A **
8913494-C-A 9045453-C-A **
18703317-C-A 16591437-C-A **
7964616-C-A 8096575-C-A **
17503679-G-T 15391799-G-T **
16245924-G-T 14134044-G-T **
16180845-G-A 14068965-G-A **
14720235-C-T 12608303-C-T **
14721585-C-A 12609653-C-A **
14736144-C-A 12624212-C-A **
2767790-C-A 2899749-C-A **
2901554-C-A 3033513-C-A **
15950435-C-A 13838555-C-A **
3407738-C-A 3539697-C-A **
7392556-C-A 7524515-C-A **
15696834-G-A 13584954-G-A **
6513400-C-A 6645359-C-A **
15604936-C-A 13493056-C-A **
7282806-T-C 7414765-T-C **
7136986-A-G 7268945-A-G **
15477179-C-A 13365299-C-A **
13836696-T-C 11715990-T-C **
21975051-C-A 19813165-C-A **
13228247-C-A 11072571-C-A **
13222036-A-G 11066360-A-G **
21112158-A-G 18950272-A-G **
19066257-C-A 16954377-C-A **
10029441-A-T 10191832-A-T **
10021881-C-A 10184272-C-A **
9931634-C-A 10094025-C-A **
21629518-A-G 19467632-A-G **
10041346-A-T 10203737-A-T **
10041351-A-G 10203742-A-G **
21950036-T-C 19788150-T-C **
18401595-T-A 16289715-T-A P6_Gap **
18818045-C-A 16706165-C-A **
18093351-C-A 15981471-C-A **
25417566-A-T 23271419-A-T P2_r2 ***
25781594-G-T 23635447-G-T P1_b3 ***
25757926-T-A 23611779-T-A P1_b3 ***
24043874-A-G 21897727-A-G ***
24673348-G-T 22527201-G-T P3_b2 ***
24036632-T-C 21890485-T-C ***
24796956-C-A 22650809-C-A P3_b2 ***
25757954-T-A 23611807-T-A P1_b3 ***
24013790-G-T 21867643-G-T ***
23873368-G-T 21711482-G-T ***
25674924-T-C 23528777-T-C P1_b3 ***
25850531-C-A 23704384-C-A P1_Y1 ***
23833134-T-A 21671248-T-A ***
26228811-A-T 24082664-A-T P1_Y1 ***
23264045-A-G 21102159-A-G ***
26260152-G-T 24114005-G-T P1_Y1 ***
26283242-C-T 24137095-C-T P1_Y1 ***
23142037-C-A 20980151-C-A ***
24614201-A-C 22468054-A-C P3_t2 ***
24614198-G-C 22468051-G-C P3_t2 ***
24573454-C-T 22427307-C-T P3_t2 ***
25441122-A-C 23294975-A-C P2_r2 ***
24566440-A-C 22420293-A-C P3_t2 ***
25369707-A-C 23223560-A-C P2_r2 ***
25424594-G-A 23278447-G-A P2_r2 ***
25356934-T-C 23210787-T-C P2_r2 ***
25232117-G-T 23085970-G-T P2_r1 ***
25188187-G-A 23042040-G-A g1 ***
25424622-C-A 23278475-C-A P2_r2 ***
24508351-T-C 22362204-T-C ***
25524747-A-T 23378600-A-T P1_gr1 ***
25177008-A-T 23030861-A-T g1 ***
24597864-T-G 22451717-T-G P3_t2 ***
25502605-T-C 23356458-T-C P1_gr1 ***
24272128-A-T 22125981-A-T P3_b1 ***
24235417-G-A 22089270-G-A P3_b1 ***
24207437-A-C 22061290-A-C P3_b1 ***
24604296-C-T 22458149-C-T P3_t2 ***
24575930-G-T 22429783-G-T P3_t2 ***
22492694-C-G 20330808-C-G DYZ19 ***
23052926-C-A 20891040-C-A ***
21457381-G-A 19295495-G-A ***
22286172-A-C 20124286-A-C DYZ19 ***
22286151-T-G 20124265-T-G DYZ19 ***
22277828-A-C 20115942-A-C DYZ19 ***
22277811-A-T 20115925-A-T DYZ19 ***
22277808-A-G 20115922-A-G DYZ19 ***
22122873-C-A 19960987-C-A ***
22080001-A-G 19918115-A-G ***
22010288-C-A 19848402-C-A ***
21665614-A-C 19503728-A-C ***
21616190-C-A 19454304-C-A ***
21597212-G-A 19435326-G-A ***
21547377-C-A 19385491-C-A ***
21407137-G-T 19245251-G-T ***
22286258-C-G 20124372-C-G DYZ19 ***
21392389-C-A 19230503-C-A ***
21240576-C-A 19078690-C-A ***
21162245-C-A 19000359-C-A ***
21092166-G-A 18930280-G-A ***
21092161-G-T 18930275-G-T ***
21079166-A-G 18917280-A-G ***
20998238-T-A 18836352-T-A P4_Dst ***
20809476-C-A 18647590-C-A P4_Gap ***
20795835-A-C 18633949-A-C P4_Prx ***
20756229-C-A 18594343-C-A P4_Prx ***
20500970-T-G 18339084-T-G P5_Dst ***
20141085-C-G 18029205-C-G P5_Dst ***
22286236-G-T 20124350-G-T DYZ19 ***
22286290-C-A 20124404-C-A DYZ19 ***
23019977-A-C 20858091-A-C ***
22481228-G-T 20319342-G-T DYZ19 ***
22951276-T-C 20789390-T-C ***
22903655-C-G 20741769-C-G ***
22611212-C-A 20449326-C-A ***
22504755-G-T 20342869-G-T DYZ19 ***
22498135-G-A 20336249-G-A DYZ19 ***
22498131-T-G 20336245-T-G DYZ19 ***
22498106-G-T 20336220-G-T DYZ19 ***
26379409-A-C 24233262-A-C P1_Y1 ***
22492656-G-C 20330770-G-C DYZ19 ***
22492637-A-T 20330751-A-T DYZ19 ***
22481691-G-A 20319805-G-A DYZ19 ***
22481633-G-T 20319747-G-T DYZ19 ***
22431775-A-G 20269889-A-G DYZ19 ***
22303515-T-G 20141629-T-G DYZ19 ***
22421182-G-C 20259296-G-C DYZ19 ***
22420987-C-T 20259101-C-T DYZ19 ***
22420935-A-G 20259049-A-G DYZ19 ***
22420438-G-A 20258552-G-A DYZ19 ***
22420437-A-G 20258551-A-G DYZ19 ***
22357023-T-A 20195137-T-A DYZ19 ***
22352482-G-A 20190596-G-A DYZ19 ***
22341324-T-A 20179438-T-A DYZ19 ***
22338626-A-C 20176740-A-C DYZ19 ***
22328388-A-G 20166502-A-G DYZ19 ***
22322202-C-T 20160316-C-T DYZ19 ***
22321176-A-C 20159290-A-C DYZ19 ***
26366147-G-T 24220000-G-T P1_Y1 ***
26991211-T-A 24845064-T-A P1_r4 ***
26386396-T-C 24240249-T-C P1_Y1 ***
14819674-CTT-C 12707741-CTT-C 15×T***
22236364-TTG-CTA 20074478-TTG-CTA DYZ19 ***
20795860-AGAT-GGAA 18633974-AGAT-GGAA P4_Prx ***
20434723-CAG-AAA 18272837-CAG-AAA P5_Dst ***
20420585-AT-A 18258699-AT-A P5_Dst ***
20326037-GCA-TCT 18164151-GCA-TCT P5_Dst ***
19847674-ATTTGC-TTTTTT 17735794-ATTTGC-TTTTTT P5_Prx ***
19730982-GGT-TGG 17619102-GGT-TGG P5_Prx ***
17196749-TAGA-AAGG 15084869-TAGA-AAGG 14×AGAA***
16627724-GTGTA-ATGTG 14515844-GTGTA-ATGTG ***
15076177-ATTC-TTTT 12964267-ATTC-TTTT ***
15070614-CAAAAAA-C 12958705-CAAAAAA-C 20×A***
15070614-CAAAAA-C 12958705-CAAAAA-C 20×A***
14026960-T-TCTAC 11906254-T-TCTAC ***
22341305-CC-TT 20179419-CC-TT DYZ19 ***
13868775-TGAAT-CAAAA 11748069-TGAAT-CAAAA ***
13866334-CTAGTGT-GGAGTGG 11745628-CTAGTGT-GGAGTGG ***
13866283-AGAAATGGAA-TGAATTGCAG 11745577-AGAAATGGAA-TGAATTGCAG ***
13866106-AT-A 11745400-AT-A ***
13858577-ATG-TTC 11737871-ATG-TTC ***
13856582-GG-CA 11735876-GG-CA ***
13856563-AAACGGAA-CAAAGGAG 11735857-AAACGGAA-CAAAGGAG ***
13847243-GGAA-TGAC 11726537-GGAA-TGAC ***
13805064-GT-ATCAAACGGAA 11684358-GT-ATCAAACGGAA ***
13801190-AT-CC 11680484-AT-CC ***
13801012-TGCAA-AGAT 11680306-TGCAA-AGAT ***
13733346-TGGAATGGAATGTAATGGAA-T 11577670-TGGAATGGAATGTAATGGAA-T ***
13729176-TTC-CTG 11573500-TTC-CTG ***
22257312-AATTC-CGTTG 20095426-AATTC-CGTTG DYZ19 ***
22346956-AAAA-TAAT 20185070-AAAA-TAAT DYZ19 ***
13480895-TGTCAC-CATCAA 11325219-TGTCAC-CATCAA ***
27966778-GA-G 25820631-GA-G P1_Y2 9×A***
58981165-CT-TG 56835018-CT-TG ***
58979269-AC-CT 56833122-AC-CT ***
58979207-GCG-ACA 56833060-GCG-ACA ***
58978989-G-GCCACTCCTTT 56832842-G-GCCACTCCTTT ***
58978858-GTCCTC-CTCCAT 56832711-GTCCTC-CTCCAT ***
58978664-AAT-CAA 56832517-AAT-CAA ***
58977679-CT-TG 56831532-CT-TG ***
58977171-TTC-CTG 56831024-TTC-CTG ***
58908917-TTG-CTT 56681952-CAA-AAG ***
58883870-T-TTCCAA 56706996-A-ATGGAT ***
28788038-TAA-AAACCGAG 26641891-TAA-AAACCGAG ***
28160781-GTTCTGC-TTTTTGG 26014634-GTTCTGC-TTTTTGG P1_b4 ***
27808453-C-CTT 25662306-C-CTT P1_Y2 15×T***
22420437-AGTA-GATG 20258551-AGTA-GATG DYZ19 ***
27233195-CTTTTTTTGT-C 25087048-CTTTTTTTGT-C P1_g3 ***
27095967-ATTTG-TTTTT 24949820-ATTTG-TTTTT P1_r4 ***
27016333-GT-G 24870186-GT-G P1_r4 ***
27004221-CCTT-C 24858074-CCTT-C P1_r4 ***
26814944-T-TA 24668797-T-TA P1_g2 12×A***
26280102-AT-A 24133955-AT-A P1_Y1 ***
25424574-CT-C 23278427-CT-C P2_r2 17×T***
24792961-ACTTTCCT-CCTTCCCC 22646814-ACTTTCCT-CCTTCCCC P3_b2 ***
24731747-GT-G 22585600-GT-G P3_b2 ***
24679754-CCA-C 22533607-CCA-C P3_b2 ***
24677507-AAAC-A 22531360-AAAC-A P3_b2 5×AAC***
24043830-AGGT-GGGG 21897683-AGGT-GGGG ***
22492629-GC-AG 20330743-GC-AG DYZ19 ***
13724680-GTG-CTC 11569004-GTG-CTC ***
13480875-GG-AT 11325199-GG-AT ***
26399236-A-G 24253089-A-G P1_Y1 ***
27033095-C-T 24886948-C-T P1_r4 17×T***
28104007-G-C 25957860-G-C P1_Y2 ***
27987999-C-T 25841852-C-T P1_Y2 ***
27872508-C-A 25726361-C-A P1_Y2 ***
27861688-G-T 25715541-G-T P1_Y2 ***
27861674-G-T 25715527-G-T P1_Y2 ***
27417707-T-A 25271560-T-A P1_g3 ***
27417706-C-A 25271559-C-A P1_g3 ***
27330157-C-A 25184010-C-A P1_g3 ***
27273079-G-A 25126932-G-A P1_g3 ***
27254109-C-A 25107962-C-A P1_g3 ***
27120594-G-T 24974447-G-T P1_r4 ***
27082165-C-G 24936018-C-G P1_r4 ***
27004203-C-T 24858056-C-T P1_r4 ***
28243918-G-A 26097771-G-A P1_b4 ***
27001809-A-C 24855662-A-C P1_r4 ***
26991214-T-A 24845067-T-A P1_r4 ***
20101729-C-T 17989849-C-T P5_Dst ***
26991207-C-A 24845060-C-A P1_r4 ***
26991205-T-A 24845058-T-A P1_r4 ***
26981984-C-A 24835837-C-A P1_r4 ***
26979940-G-A 24833793-G-A P1_r4 ***
26963099-T-G 24816952-T-G P1_r3 ***
26880289-A-T 24734142-A-T P1_r3 ***
26810680-C-A 24664533-C-A P1_g2 ***
26809347-A-C 24663200-A-C P1_g2 ***
26574855-C-A 24428708-C-A P1_g2 ***
26415706-G-T 24269559-G-T P1_Y1 ***
28157362-G-C 26011215-G-C P1_b4 ***
28311248-C-A 26165101-C-A P1_b4 ***
13461064-AGGC-GGGA 11305388-AGGC-GGGA ***
25939403-C-CT 23793256-C-CT P1_Y1 11×T***
13453204-CAC-GAT 11297528-CAC-GAT ***
13447668-GCATTC-G 11291992-GCATTC-G 4×CATTC***
13446514-GCAC-CCAA 11290838-GCAC-CCAA ***
13323515-AAAATACCG-TAAACA 11167839-AAAATACCG-TAAACA ***
13113097-AC-A 10602583-AC-A ***
9580940-CTG-C 9743331-CTG-C IR3_Prx ***
8125062-G-GAGAAGAGA 8257021-G-GAGAAGAGA 12×AGAGA***
5433997-A-ATT 5565956-A-ATT ***
3853806-TTATA-T 3985765-TTATA-T 8×TA***
2790303-CTT-C 2922262-CTT-C 15×T***
58982066-AATTCCA-CACTCCT 56835919-AATTCCA-CACTCCT ***
8125058-AAG-A 8257017-AAG-A ***
14142337-AT-A 12021631-AT-A 13×T***
28515200-C-A 26369053-C-A ***
23886722-A-AT 21724836-A-AT 13×T***
15374441-GT-G 13262561-GT-G 20×T***
13461009-CAAGT-TGAGC 11305333-CAAGT-TGAGC ***
23045471-C-CA 20883585-C-CA 16×A***
58982866-C-A 56836719-C-A ***
58982821-A-T 56836674-A-T ***
58980655-C-T 56834508-C-T ***
58979058-C-A 56832911-C-A ***
58848132-T-C 56742739-A-G ***
28763141-C-A 26616994-C-A ***
28734644-C-A 26588497-C-A ***
28731487-C-A 26585340-C-A ***
28623207-C-A 26477060-C-A ***
20137713-G-T 18025833-G-T P5_Dst ***
22286195-C-G 20124309-C-G DYZ19 ***
20084194-C-A 17972314-C-A P5_Dst ***
7053814-C-A 7185773-C-A ***
7579913-C-A 7711872-C-A ***
7490732-C-A 7622691-C-A IR1_L ***
7433459-C-A 7565418-C-A ***
7418589-G-A 7550548-G-A ***
7322673-C-A 7454632-C-A ***
7321739-A-G 7453698-A-G ***
7319034-C-A 7450993-C-A ***
7218281-G-T 7350240-G-T ***
7139370-T-C 7271329-T-C ***
7100861-C-A 7232820-C-A ***
7053831-C-A 7185790-C-A ***
6925100-G-A 7057059-G-A ***
7649196-C-A 7781155-C-A ***
6674857-T-G 6806816-T-G ***
5059695-T-C 5191654-T-C ***
4521837-A-G 4653796-A-G ***
4521586-T-A 4653545-T-A ***
4302098-A-G 4434057-A-G ***
4069745-A-T 4201704-A-T ***
3091855-C-G 3223814-C-G ***
3016045-C-A 3148004-C-A ***
2813599-C-A 2945558-C-A ***
2767730-C-T 2899689-C-T ***
13860037-A-G 11739331-A-G ***
7646774-C-A 7778733-C-A ***
7706377-C-A 7838336-C-A ***
22421191-G-A 20259305-G-A DYZ19 ***
9461880-C-A 9624271-C-A ***
10088736-A-T 10251127-A-T ***
10023000-C-A 10185391-C-A ***
9964199-C-A 10126590-C-A ***
9952428-C-A 10114819-C-A ***
9928074-C-A 10090465-C-A ***
9865168-A-G 10027559-A-G ***
9731647-G-T 9894038-G-T IR3_Prx ***
9583717-G-T 9746108-G-T IR3_Prx ***
9540800-T-A 9703191-T-A IR3_Prx ***
9524378-C-A 9686769-C-A ***
9518896-T-G 9681287-T-G ***
9402439-C-A 9564830-C-A ***
7717666-C-T 7849625-C-T 5×TCTT***
9365627-T-G 9528018-T-G ***
9365623-T-G 9528014-T-G ***
9364367-A-C 9526758-A-C ***
9362925-C-A 9525316-C-A ***
9294282-C-A 9456673-C-A ***
9194284-A-C 9356675-A-C ***
8832206-C-A 8964165-C-A ***
8735099-C-A 8867058-C-A ***
8349275-C-A 8481234-C-A ***
8135668-C-A 8267627-C-A ***
7991110-G-A 8123069-G-A ***
7764451-C-A 7896410-C-A ***
10043094-T-G 10205485-T-G ***
13489513-C-G 11333837-C-G ***
13135550-C-T 10625036-C-T ***
13405153-TT-A 11249477-TT-A ***
26902223-T-A 24756076-T-A P1_r3 ***
18008740-C-T 15896860-C-T P7_Dst ***
13729803-C-T 11574127-C-T ***
17090877-A-T 14978997-A-T ***
25127483-T-G 22981336-T-G g1 ***
58977613-CTCCTC-TTCCAT 56831466-CTCCTC-TTCCAT ***
24575909-A-C 22429762-A-C P3_t2 ***
13962138-A-T 11841432-A-T ***
9735605-G-GTT 9897996-G-GTT IR3_Prx 30×T***
6992553-C-CT 7124512-C-CT 17×T***
22433294-A-G 20271408-A-G DYZ19 ***
13744854-A-T 11589178-A-T ***
58980486-ACCA-GCCG 56834339-ACCA-GCCG ***
20200587-AT-A 18038701-AT-A P5_Dst 13×T***
58977163-C-T 56831016-C-T ***
58976210-C-A 56830063-C-A ***
13488789-G-C 11333113-G-C ***
22431801-T-A 20269915-T-A DYZ19 ***
22431738-G-T 20269852-G-T DYZ19 ***
10016751-GTT-ATG 10179142-GTT-ATG ***
27417717-C-A 25271570-C-A P1_g3 ***
21946463-GAA-G 19784577-GAA-G 15×A***
28149420-C-CT 26003273-C-CT P1_b4 10×T***
7179734-G-GT 7311693-G-GT 25×T***
58978666-T-A 56832519-T-A ***
25447269-GGTAGTA-G 23301122-GGTAGTA-G P2_r2 9×GTA***
13488921-G-T 11333245-G-T ***
13461108-A-T 11305432-A-T ***
13466450-G-C 11310774-G-C ***
25935140-G-C 23788993-G-C P1_Y1 ***
25379460-C-T 23233313-C-T P2_r2 ***
24947116-A-G 22800969-A-G g1 ***
22333950-A-G 20172064-A-G DYZ19 ***
27684713-TAC-AAA 25538566-TAC-AAA P1_Y2 ***
9852715-CA-C 10015106-CA-C 12×A***
13461089-TC-AG 11305413-TC-AG ***
26991224-G-A 24845077-G-A P1_r4 ***
26563869-G-T 24417722-G-T P1_g2 ***
17897897-C-A 15786017-C-A CTS8246 ***
15183002-C-A 13071088-C-A ***
13436229-A-T 11280553-A-T ***
19727360-A-C 17615480-A-C P5_Prx ***
10042983-C-A 10205374-C-A ***
7019055-T-A 7151014-T-A FGC8828 ***
19231319-CTTTTTTTTTTT-C 17119439-CTTTTTTTTTTT-C 24×T***
8555570-T-TTTTTG 8687529-T-TTTTTG ***
26810744-C-T 24664597-C-T P1_g2 ***
24535255-A-C 22389108-A-C A10468 P3_t2 ***
9208907-C-T 9371298-C-T ***
20434742-C-T 18272856-C-T P5_Dst ***
17616854-C-A 15504974-C-A ***
9564485-T-G 9726876-T-G IR3_Prx ***
22536983-T-TA 20375097-T-TA 16×A***
26880351-A-T 24734204-A-T P1_r3 ***
13131577-C-A 10621063-C-A ***
13258938-C-A 11103262-C-A ***
19943078-T-C 17831198-T-C P5_Prx ***
17144013-A-C 15032133-A-C ***
18011039-A-G 15899159-A-G P7_Dst ***
17994772-G-A 15882892-G-A P7_Prx ***
17920816-C-T 15808936-C-T ***
17914471-C-A 15802591-C-A ***
17812238-C-A 15700358-C-A ***
17673053-C-A 15561173-C-A ***
17598116-C-G 15486236-C-G ***
17478280-C-A 15366400-C-A ***
17406890-C-A 15295010-C-A ***
17389896-A-T 15278016-A-T ***
17388316-C-A 15276436-C-A ***
17128529-C-T 15016649-C-T ***
18019125-C-A 15907245-C-A ***
17030619-C-A 14918739-C-A ***
16865375-T-A 14753495-T-A ***
16520771-A-C 14408891-A-C ***
16479981-C-A 14368101-C-A ***
16450302-C-A 14338422-C-A ***
16417559-C-A 14305679-C-A ***
16379040-C-A 14267160-C-A ***
16292675-C-T 14180795-C-T ***
16107589-C-T 13995709-C-T P8_Prx ***
16107489-G-C 13995609-G-C P8_Prx ***
16090197-T-C 13978317-T-C ***
18011053-T-G 15899173-T-G P7_Dst ***
18019209-C-A 15907329-C-A ***
16059825-C-A 13947945-C-A ***
19098648-G-A 16986768-G-A ***
19847668-C-T 17735788-C-T P5_Prx ***
19829349-A-T 17717469-A-T P5_Prx ***
19753354-C-T 17641474-C-T P5_Prx ***
19745044-A-T 17633164-A-T P5_Prx ***
19739822-T-G 17627942-T-G P5_Prx ***
19731001-T-A 17619121-T-A P5_Prx ***
19524723-T-C 17412843-T-C ***
19449287-T-G 17337407-T-G ***
19259072-C-A 17147192-C-A ***
19187529-C-T 17075649-C-T ***
19168442-C-A 17056562-C-A ***
19058046-C-A 16946166-C-A ***
18195945-C-A 16084065-C-A ***
19055517-G-T 16943637-G-T ***
18972772-C-A 16860892-C-A ***
18873455-A-G 16761575-A-G ***
18789586-A-G 16677706-A-G ***
18737481-C-A 16625601-C-A ***
18727127-G-A 16615247-G-A ***
18708090-C-A 16596210-C-A ***
13488849-C-A 11333173-C-A ***
18636718-C-A 16524838-C-A ***
18352981-A-C 16241101-A-C P6_Prx ***
18321254-C-T 16209374-C-T P6_Prx ***
18204978-C-A 16093098-C-A ***
16084213-C-A 13972333-C-A ***
15928699-C-A 13816819-C-A ***
13457680-C-G 11302004-C-G ***
13487805-T-C 11332129-T-C ***
13744818-G-A 11589142-G-A ***
13740703-G-A 11585027-G-A ***
13737884-A-G 11582208-A-G ***
13733593-T-G 11577917-T-G ***
13652273-G-A 11496597-G-A ***
13641201-T-A 11485525-T-A ***
13489551-T-A 11333875-T-A ***
13488773-C-T 11333097-C-T ***
13488648-C-T 11332972-C-T ***
13488636-G-A 11332960-G-A ***
13487818-G-T 11332142-G-T ***
13486508-C-A 11330832-C-A ***
13799491-A-G 11678785-A-G ***
13481288-G-A 11325612-G-A ***
13480867-C-T 11325191-C-T ***
13480801-T-G 11325125-T-G ***
13474487-C-A 11318811-C-A ***
13468239-A-C 11312563-A-C ***
13468202-A-T 11312526-A-T ***
13461073-C-T 11305397-C-T ***
13457807-T-G 11302131-T-G ***
13457761-C-G 11302085-C-G ***
13457709-T-C 11302033-T-C ***
13457702-A-T 11302026-A-T ***
13457681-C-T 11302005-C-T ***
13744821-A-T 11589145-A-T ***
13859386-A-G 11738680-A-G ***
15882067-T-C 13770187-T-C ***
14784693-C-A 12672763-C-A ***
15778591-C-A 13666711-C-A ***
15669833-G-T 13557953-G-T ***
15619046-C-A 13507166-C-A ***
15532287-C-A 13420407-C-A ***
15497167-A-T 13385287-A-T ***
15409586-C-A 13297706-C-A ***
15038383-C-T 12926473-C-T ***
14989172-T-A 12877238-T-A ***
14825865-A-T 12713932-A-T ***
14815659-C-A 12703730-C-A ***
14785772-A-G 12673842-A-G ***
14774287-C-T 12662356-C-T ***
13860019-A-G 11739313-A-G ***
14639161-C-A 12527230-C-A ***
14562823-C-A 12451023-C-A ***
14511518-T-C 12399723-T-C ***
14507628-C-T 12395833-C-T ***
14391768-C-A 12271064-C-A ***
14174100-G-T 12053394-G-T ***
14106826-A-C 11986120-A-C ***
14089902-C-T 11969196-C-T ***
14046617-C-A 11925911-C-A ***
14022192-T-C 11901486-T-C ***
13919252-C-A 11798546-C-A ***
13866001-A-G 11745295-A-G ***
58983029-T-TCCACTCCATTCCATTCCATC 56836882-T-TCCACTCCATTCCATTCCATC ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Stewart1324141011-14121211131330189-1011112415193015-15-17-17111219-241515171735-36121212915-1681010810101222-23161012121481122201312111311111212

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 3576251033269774139577488317
Used in age calculations1033269774139577488317
Counts of SNPs95
Variant counts last updated 2017-11-13 20:52:00.



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