Alford
FTDNA: B5857, BigY2: B5857Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA B5857 | BigY2 B5857 |
|---|---|---|---|---|---|---|---|---|
| hg19:Y:6177378-T-C hg38:Y:6309337-T-C | BY160998 | IR3_Dst | *** | A* | ||||
| hg19:Y:17993276-C-T hg38:Y:15881396-C-T | P7_Prx | Y | *** | A* | ||||
| hg19:Y:24272980-T-TTATC hg38:Y:22126833-T-TTATC | P3_b1 | *** | A* | |||||
| hg19:Y:6698263-G-T hg38:Y:6830222-G-T | BY60776 | Y | Y | + | + | |||
| hg19:Y:8530535-T-G hg38:Y:8662494-T-G | BY73719 | Y | Y | + | + | |||
| hg19:Y:9996644-A-G hg38:Y:10159035-A-G | BY82661 | Y | + | + | ||||
| hg19:Y:14518243-G-A hg38:Y:12406444-G-A | BY96271 | Y | Y | + | + | |||
| hg19:Y:14927877-TAAC-T hg38:Y:12815942-TAAC-T | + | + | ||||||
| hg19:Y:14969325-C-T hg38:Y:12857400-C-T | ZS11334 | Y | Y | + | + | |||
| hg19:Y:15709883-A-G hg38:Y:13598003-A-G | BY103468 | Y | Y | + | + | |||
| hg19:Y:17296539-T-C hg38:Y:15184659-T-C | BY113595 | Y | Y | + | + | |||
| hg19:Y:17637623-G-A hg38:Y:15525743-G-A | F21963 | Y | Y | + | + | |||
| hg19:Y:17760795-C-A hg38:Y:15648915-C-A | BY117204 | Y | Y | + | + | |||
| hg19:Y:18111474-G-A hg38:Y:15999594-G-A | BY120136 | Y | Y | + | + | |||
| hg19:Y:18659487-G-T hg38:Y:16547607-G-T | BY122904 | Y | Y | + | + | |||
| hg19:Y:19246270-C-T hg38:Y:17134390-C-T | BY127645 | Y | Y | + | + | |||
| hg19:Y:21169761-T-C hg38:Y:19007875-T-C | BY130852 | Y | Y | + | + | |||
| hg19:Y:22467624-G-C hg38:Y:20305738-G-C | BY221940 | DYZ19 | + | + | ||||
| hg19:Y:22925406-G-A hg38:Y:20763520-G-A | BY141780 | Y | Y | + | + | |||
| hg19:Y:22946016-T-C hg38:Y:20784130-T-C | BY141961 | Y | Y | + | + | |||
| hg19:Y:23137915-G-T hg38:Y:20976029-G-T | FT182653 | Y | Y | + | + | |||
| hg19:Y:23461152-G-T hg38:Y:21299266-G-T | BY145443 | Y | Y | + | + | |||
| hg19:Y:23558206-G-C hg38:Y:21396320-G-C | BY146260 | Y | Y | + | + | |||
| hg19:Y:23744499-T-A hg38:Y:21582613-T-A | BY147310 | + | + | |||||
| hg19:Y:23834627-A-G hg38:Y:21672741-A-G | BY148183 | Y | + | + | ||||
| hg19:Y:24071551-C-T hg38:Y:21925404-C-T | BY160834 | P3_b1 | + | + | ||||
| hg19:Y:17080758-TA-T hg38:Y:14968878-TA-T | + | + | ||||||
| hg19:Y:6336467-A-T hg38:Y:6468426-A-T | IR3_Dst | *** | * | |||||
| hg19:Y:22264094-A-C hg38:Y:20102208-A-C | DYZ19 | *** | * | |||||
| hg19:Y:22432403-A-T hg38:Y:20270517-A-T | DYZ19 | *** | * | |||||
| hg19:Y:28811556-C-A hg38:Y:26665409-C-A | BY26680 | ** | * | |||||
| hg19:Y:22279246-GT-G hg38:Y:20117360-GT-G | DYZ19 | *** | * | |||||
| hg19:Y:13254522-C-A hg38:Y:11098846-C-A | ** | |||||||
| hg19:Y:23188967-C-G hg38:Y:21027081-C-G | FT299259 | ** | ||||||
| hg19:Y:26233709-A-T hg38:Y:24087562-A-T | P1_Y1 | *** | ** | |||||
| hg38:Y:11001401-C-G | ** | |||||||
| hg19:Y:14093596-C-A hg38:Y:11972890-C-A | ** | |||||||
| hg19:Y:26089841-C-CAA hg38:Y:23943694-C-CAA | P1_Y1 | 26×A | ** | |||||
| hg38:Y:10746934-A-T | ** | |||||||
| hg19:Y:23373197-C-A hg38:Y:21211311-C-A | ** | |||||||
| hg19:Y:18037986-C-A hg38:Y:15926106-C-A | ** | |||||||
| hg19:Y:16932783-C-A hg38:Y:14820903-C-A | ** | |||||||
| hg38:Y:10988619-C-T | ** | |||||||
| hg19:Y:14349404-T-C hg38:Y:12228699-T-C | ** | |||||||
| hg19:Y:2746052-G-A hg38:Y:2878011-G-A | ** | |||||||
| hg19:Y:19539530-C-A hg38:Y:17427650-C-A | ** | |||||||
| hg38:Y:10666929-C-T | ** | |||||||
| hg19:Y:28703375-C-A hg38:Y:26557228-C-A | ** | |||||||
| hg19:Y:2928522-A-G hg38:Y:3060481-A-G | ** | |||||||
| hg19:Y:14448310-C-A hg38:Y:12327583-C-A | ** | |||||||
| hg19:Y:18462486-C-A hg38:Y:16350606-C-A | P6_Dst | ** | ||||||
| hg19:Y:16505131-C-A hg38:Y:14393251-C-A | ** | |||||||
| hg19:Y:20213238-G-T hg38:Y:18051352-G-T | P5_Dst | ** | ||||||
| hg19:Y:14106856-C-A hg38:Y:11986150-C-A | ** | |||||||
| hg19:Y:14467350-C-A hg38:Y:12346619-C-A | ** | |||||||
| hg38:Y:10988614-C-G | ** | |||||||
| hg38:Y:10630544-C-T | ** | |||||||
| hg38:Y:10630568-C-T | ** | |||||||
| hg38:Y:10630593-C-A | ** | |||||||
| hg19:Y:23825046-TTATA-T hg38:Y:21663160-TTATA-T | 9×TA | ** | ||||||
| hg38:Y:10935561-C-CCATTT | ** | |||||||
| hg38:Y:10663674-C-A | ** | |||||||
| hg19:Y:8217928-C-A hg38:Y:8349887-C-A | ** | |||||||
| hg19:Y:21827866-C-A hg38:Y:19665980-C-A | ** | |||||||
| hg19:Y:14593463-C-CT hg38:Y:12481663-C-CT | ** | |||||||
| hg19:Y:23259219-C-A hg38:Y:21097333-C-A | ** | |||||||
| hg19:Y:8720191-C-A hg38:Y:8852150-C-A | ** | |||||||
| hg19:Y:17634637-C-A hg38:Y:15522757-C-A | ** | |||||||
| hg38:Y:10689852-C-A | ** | |||||||
| hg19:Y:23255330-C-A hg38:Y:21093444-C-A | ** | |||||||
| hg19:Y:17871684-C-A hg38:Y:15759804-C-A | ** | |||||||
| hg19:Y:8704246-C-G hg38:Y:8836205-C-G | ** | |||||||
| hg19:Y:8217897-C-A hg38:Y:8349856-C-A | ** | |||||||
| hg19:Y:26463138-G-A hg38:Y:24316991-G-A | P1_Y1 | ** | ||||||
| hg19:Y:17090755-C-A hg38:Y:14978875-C-A | ** | |||||||
| hg38:Y:10962620-T-C | ** | |||||||
| hg19:Y:15950495-G-A hg38:Y:13838615-G-A | PH1920 | ** | ||||||
| hg19:Y:14376673-C-A hg38:Y:12255969-C-A | ** | |||||||
| hg19:Y:22011663-C-A hg38:Y:19849777-C-A | ** | |||||||
| hg38:Y:10926529-T-C | ** | |||||||
| hg38:Y:10691307-G-T | ** | |||||||
| hg19:Y:9941467-C-A hg38:Y:10103858-C-A | ** | |||||||
| hg19:Y:21555349-C-A hg38:Y:19393463-C-A | ** | |||||||
| hg19:Y:17580133-C-A hg38:Y:15468253-C-A | ** | |||||||
| hg19:Y:18522379-G-T hg38:Y:16410499-G-T | P6_Dst | ** | ||||||
| hg19:Y:17588527-C-A hg38:Y:15476647-C-A | ** | |||||||
| hg19:Y:19461800-C-A hg38:Y:17349920-C-A | ** | |||||||
| hg19:Y:24363968-C-A hg38:Y:22217821-C-A | ** | |||||||
| hg19:Y:22787198-C-A hg38:Y:20625312-C-A | ** | |||||||
| hg19:Y:15761543-C-A hg38:Y:13649663-C-A | ** | |||||||
| hg19:Y:22885053-C-A hg38:Y:20723167-C-A | ** | |||||||
| hg19:Y:18932044-C-A hg38:Y:16820164-C-A | ** | |||||||
| hg19:Y:21133500-T-A hg38:Y:18971614-T-A | ** | |||||||
| hg19:Y:15909503-C-A hg38:Y:13797623-C-A | ** | |||||||
| hg19:Y:2728250-A-G hg38:Y:2860209-A-G | ** | |||||||
| hg19:Y:2746062-CT-C hg38:Y:2878021-CT-C | ** | |||||||
| hg19:Y:2746066-G-A hg38:Y:2878025-G-A | ** | |||||||
| hg19:Y:2746075-GA-G hg38:Y:2878034-GA-G | ** | |||||||
| hg19:Y:2773576-G-T hg38:Y:2905535-G-T | ** | |||||||
| hg19:Y:2791224-G-T hg38:Y:2923183-G-T | ** | |||||||
| hg19:Y:3274903-T-C hg38:Y:3406862-T-C | ** | |||||||
| hg19:Y:3287152-G-A hg38:Y:3419111-G-A | ** | |||||||
| hg19:Y:3327851-A-T hg38:Y:3459810-A-T | ** | |||||||
| hg19:Y:3388627-A-G hg38:Y:3520586-A-G | ** | |||||||
| hg19:Y:3393496-C-A hg38:Y:3525455-C-A | ** | |||||||
| hg19:Y:3437097-C-T hg38:Y:3569056-C-T | ** | |||||||
| hg19:Y:3558181-A-G hg38:Y:3690140-A-G | ** | |||||||
| hg19:Y:3603176-C-T hg38:Y:3735135-C-T | ** | |||||||
| hg19:Y:3626808-A-C hg38:Y:3758767-A-C | ** | |||||||
| hg19:Y:3966938-G-T hg38:Y:4098897-G-T | ** | |||||||
| hg19:Y:3979831-C-A hg38:Y:4111790-C-A | ** | |||||||
| hg19:Y:4062711-T-G hg38:Y:4194670-T-G | ** | |||||||
| hg19:Y:4077744-A-T hg38:Y:4209703-A-T | ** | |||||||
| hg19:Y:4123894-A-C hg38:Y:4255853-A-C | ** | |||||||
| hg19:Y:4205691-G-T hg38:Y:4337650-G-T | ** | |||||||
| hg19:Y:4205847-G-T hg38:Y:4337806-G-T | ** | |||||||
| hg19:Y:4444465-A-G hg38:Y:4576424-A-G | ** | |||||||
| hg19:Y:4521624-A-AT hg38:Y:4653583-A-AT | ** | |||||||
| hg19:Y:4687913-A-T hg38:Y:4819872-A-T | ** | |||||||
| hg19:Y:4828413-C-A hg38:Y:4960372-C-A | ** | |||||||
| hg19:Y:5684212-T-A hg38:Y:5816171-T-A | ** | |||||||
| hg19:Y:5717653-GGCA-G hg38:Y:5849612-GGCA-G | ** | |||||||
| hg19:Y:5821580-G-T hg38:Y:5953539-G-T | ** | |||||||
| hg19:Y:5976833-A-T hg38:Y:6108792-A-T | ** | |||||||
| hg19:Y:6001424-C-A hg38:Y:6133383-C-A | ** | |||||||
| hg19:Y:6006064-C-A hg38:Y:6138023-C-A | ** | |||||||
| hg19:Y:6012759-C-G hg38:Y:6144718-C-G | ** | |||||||
| hg19:Y:6085961-C-T hg38:Y:6217920-C-T | ** | |||||||
| hg19:Y:6085996-C-A hg38:Y:6217955-C-A | ** | |||||||
| hg19:Y:6252032-C-A hg38:Y:6383991-C-A | IR3_Dst | ** | ||||||
| hg19:Y:6331928-C-A hg38:Y:6463887-C-A | IR3_Dst | ** | ||||||
| hg19:Y:6700868-T-C hg38:Y:6832827-T-C | ** | |||||||
| hg19:Y:6734746-A-T hg38:Y:6866705-A-T | ** | |||||||
| hg19:Y:6930581-A-C hg38:Y:7062540-A-C | ** | |||||||
| hg19:Y:6934879-C-A hg38:Y:7066838-C-A | ** | |||||||
| hg19:Y:6954845-T-C hg38:Y:7086804-T-C | ** | |||||||
| hg19:Y:7008690-A-T hg38:Y:7140649-A-T | ** | |||||||
| hg19:Y:7083071-C-A hg38:Y:7215030-C-A | ** | |||||||
| hg19:Y:7160337-A-T hg38:Y:7292296-A-T | ** | |||||||
| hg19:Y:7189988-T-C hg38:Y:7321947-T-C | ** | |||||||
| hg19:Y:7202197-A-G hg38:Y:7334156-A-G | ** | |||||||
| hg19:Y:7221732-T-C hg38:Y:7353691-T-C | ** | |||||||
| hg19:Y:7231543-C-T hg38:Y:7363502-C-T | ** | |||||||
| hg19:Y:7247549-C-A hg38:Y:7379508-C-A | ** | |||||||
| hg19:Y:7296732-G-T hg38:Y:7428691-G-T | ** | |||||||
| hg19:Y:7299096-A-G hg38:Y:7431055-A-G | ** | |||||||
| hg19:Y:7420832-C-G hg38:Y:7552791-C-G | ** | |||||||
| hg19:Y:7420836-C-G hg38:Y:7552795-C-G | ** | |||||||
| hg19:Y:7534448-G-A hg38:Y:7666407-G-A | ** | |||||||
| hg19:Y:7603252-T-C hg38:Y:7735211-T-C | ** | |||||||
| hg19:Y:7662668-C-A hg38:Y:7794627-C-A | ** | |||||||
| hg19:Y:7756258-C-A hg38:Y:7888217-C-A | ** | |||||||
| hg19:Y:7853134-C-A hg38:Y:7985093-C-A | ** | |||||||
| hg19:Y:8119289-T-G hg38:Y:8251248-T-G | ** | |||||||
| hg19:Y:8344263-T-C hg38:Y:8476222-T-C | ** | |||||||
| hg19:Y:8431610-C-T hg38:Y:8563569-C-T | ** | |||||||
| hg19:Y:8482017-C-A hg38:Y:8613976-C-A | ** | |||||||
| hg19:Y:8671614-G-T hg38:Y:8803573-G-T | FT130505 | ** | ||||||
| hg19:Y:8907586-C-A hg38:Y:9039545-C-A | ** | |||||||
| hg19:Y:9034647-C-A hg38:Y:9197038-C-A | ** | |||||||
| hg19:Y:9088823-C-T hg38:Y:9251214-C-T | ** | |||||||
| hg19:Y:9129925-GA-G hg38:Y:9292316-GA-G | ** | |||||||
| hg19:Y:9618194-A-G hg38:Y:9780585-A-G | IR3_Prx | ** | ||||||
| hg19:Y:9773626-C-A hg38:Y:9936017-C-A | ** | |||||||
| hg19:Y:9822646-C-A hg38:Y:9985037-C-A | ** | |||||||
| hg19:Y:10018026-C-A hg38:Y:10180417-C-A | ** | |||||||
| hg38:Y:10672613-C-A | ** | |||||||
| hg38:Y:10677134-C-G | ** | |||||||
| hg38:Y:10677456-C-A | ** | |||||||
| hg38:Y:10746949-A-ATTCTG | ** | |||||||
| hg38:Y:10752060-G-T | ** | |||||||
| hg38:Y:10753407-T-C | ** | |||||||
| hg38:Y:10753479-C-G | ** | |||||||
| hg38:Y:10772530-C-G | ** | |||||||
| hg38:Y:10848556-C-A | ** | |||||||
| hg38:Y:10879979-C-T | ** | |||||||
| hg38:Y:10882590-C-A | ** | |||||||
| hg38:Y:10898385-C-A | ** | |||||||
| hg38:Y:10898508-C-A | ** | |||||||
| hg38:Y:10921058-C-A | ** | |||||||
| hg38:Y:10988591-A-T | ** | |||||||
| hg38:Y:11033315-T-A | ** | |||||||
| hg19:Y:13196053-C-T hg38:Y:11040377-C-T | ** | |||||||
| hg19:Y:13218068-CT-C hg38:Y:11062392-CT-C | ** | |||||||
| hg19:Y:13238448-C-A hg38:Y:11082772-C-A | ** | |||||||
| hg19:Y:13259305-C-A hg38:Y:11103629-C-A | ** | |||||||
| hg19:Y:13428432-C-A hg38:Y:11272756-C-A | ** | |||||||
| hg19:Y:13441613-CCACA-C hg38:Y:11285937-CCACA-C | ** | |||||||
| hg19:Y:13463514-C-A hg38:Y:11307838-C-A | ** | |||||||
| hg19:Y:13488587-A-T hg38:Y:11332911-A-T | ** | |||||||
| hg19:Y:13543653-A-G hg38:Y:11387977-A-G | ** | |||||||
| hg38:Y:11658717-C-A | DYZ17 | ** | ||||||
| hg38:Y:11675786-C-A | DYZ17 | ** | ||||||
| hg19:Y:13938684-G-A hg38:Y:11817978-G-A | ** | |||||||
| hg19:Y:13938700-C-T hg38:Y:11817994-C-T | ** | |||||||
| hg19:Y:13938702-C-T hg38:Y:11817996-C-T | ** | |||||||
| hg19:Y:13975193-G-T hg38:Y:11854487-G-T | ** | |||||||
| hg19:Y:13992170-T-G hg38:Y:11871464-T-G | ** | |||||||
| hg19:Y:14025680-A-G hg38:Y:11904974-A-G | ** | |||||||
| hg19:Y:14109355-C-A hg38:Y:11988649-C-A | ** | |||||||
| hg19:Y:14200467-C-A hg38:Y:12079761-C-A | ** | |||||||
| hg19:Y:14218761-A-G hg38:Y:12098055-A-G | ** | |||||||
| hg19:Y:14251437-G-T hg38:Y:12130731-G-T | ** | |||||||
| hg19:Y:14363508-G-T hg38:Y:12242803-G-T | ** | |||||||
| hg19:Y:14402346-A-G hg38:Y:12281643-A-G | ** | |||||||
| hg19:Y:14442057-A-G hg38:Y:12321330-A-G | ** | |||||||
| hg19:Y:14452730-C-A hg38:Y:12332003-C-A | ** | |||||||
| hg19:Y:14504621-C-A hg38:Y:12392826-C-A | ** | |||||||
| hg19:Y:14541191-G-T hg38:Y:12429392-G-T | ** | |||||||
| hg19:Y:14578162-C-A hg38:Y:12466362-C-A | ** | |||||||
| hg19:Y:14587785-T-C hg38:Y:12475985-T-C | ** | |||||||
| hg19:Y:14605154-A-C hg38:Y:12493356-A-C | ** | |||||||
| hg19:Y:14747434-C-A hg38:Y:12635503-C-A | ** | |||||||
| hg19:Y:14764367-C-A hg38:Y:12652436-C-A | ** | |||||||
| hg19:Y:14916778-C-A hg38:Y:12804845-C-A | ** | |||||||
| hg19:Y:14986544-C-A hg38:Y:12874612-C-A | ** | |||||||
| hg38:Y:12877312-A-AT | ** | |||||||
| hg19:Y:15001532-T-C hg38:Y:12889617-T-C | ** | |||||||
| hg19:Y:15131564-C-A hg38:Y:13019651-C-A | ** | |||||||
| hg19:Y:15168419-C-A hg38:Y:13056505-C-A | ** | |||||||
| hg19:Y:15178345-C-A hg38:Y:13066431-C-A | ** | |||||||
| hg19:Y:15288935-C-A hg38:Y:13177034-C-A | ** | |||||||
| hg19:Y:15394268-C-A hg38:Y:13282388-C-A | ** | |||||||
| hg19:Y:15400305-C-A hg38:Y:13288425-C-A | ** | |||||||
| hg19:Y:15493142-C-A hg38:Y:13381262-C-A | ** | |||||||
| hg19:Y:15503128-C-A hg38:Y:13391248-C-A | ** | |||||||
| hg19:Y:15507810-AG-A hg38:Y:13395930-AG-A | ** | |||||||
| hg19:Y:15556703-C-A hg38:Y:13444823-C-A | ** | |||||||
| hg19:Y:15596373-C-A hg38:Y:13484493-C-A | ** | |||||||
| hg19:Y:15605805-C-A hg38:Y:13493925-C-A | ** | |||||||
| hg19:Y:15857290-C-A hg38:Y:13745410-C-A | ** | |||||||
| hg19:Y:16045877-C-A hg38:Y:13933997-C-A | ** | |||||||
| hg19:Y:16061178-C-A hg38:Y:13949298-C-A | ** | |||||||
| hg19:Y:16418587-AT-A hg38:Y:14306707-AT-A | ** | |||||||
| hg19:Y:16428179-C-A hg38:Y:14316299-C-A | ** | |||||||
| hg19:Y:16451751-G-T hg38:Y:14339871-G-T | ** | |||||||
| hg19:Y:16743020-C-A hg38:Y:14631140-C-A | ** | |||||||
| hg19:Y:16760041-C-A hg38:Y:14648161-C-A | ** | |||||||
| hg19:Y:16786220-T-C hg38:Y:14674340-T-C | ** | |||||||
| hg19:Y:16922308-C-G hg38:Y:14810428-C-G | ** | |||||||
| hg19:Y:17089512-G-A hg38:Y:14977632-G-A | FT111652 | ** | ||||||
| hg19:Y:17118410-T-G hg38:Y:15006530-T-G | ** | |||||||
| hg19:Y:17157531-C-A hg38:Y:15045651-C-A | ** | |||||||
| hg19:Y:17158620-AT-A hg38:Y:15046740-AT-A | ** | |||||||
| hg19:Y:17297447-C-A hg38:Y:15185567-C-A | ** | |||||||
| hg19:Y:17425105-C-T hg38:Y:15313225-C-T | ** | |||||||
| hg19:Y:17428278-TA-T hg38:Y:15316398-TA-T | ** | |||||||
| hg19:Y:17498830-C-A hg38:Y:15386950-C-A | ** | |||||||
| hg19:Y:17536656-C-A hg38:Y:15424776-C-A | ** | |||||||
| hg19:Y:17575177-A-C hg38:Y:15463297-A-C | ** | |||||||
| hg19:Y:17716679-T-A hg38:Y:15604799-T-A | ** | |||||||
| hg19:Y:17802062-C-A hg38:Y:15690182-C-A | ** | |||||||
| hg19:Y:17831303-C-A hg38:Y:15719423-C-A | ** | |||||||
| hg19:Y:17889856-A-C hg38:Y:15777976-A-C | ** | |||||||
| hg19:Y:18185003-T-A hg38:Y:16073123-T-A | ** | |||||||
| hg19:Y:18205849-C-A hg38:Y:16093969-C-A | ** | |||||||
| hg19:Y:18222761-C-T hg38:Y:16110881-C-T | ** | |||||||
| hg19:Y:18222763-A-G hg38:Y:16110883-A-G | ** | |||||||
| hg19:Y:18345948-ATAC-A hg38:Y:16234068-ATAC-A | P6_Prx | ** | ||||||
| hg19:Y:18462554-C-A hg38:Y:16350674-C-A | P6_Dst | ** | ||||||
| hg19:Y:18491826-G-T hg38:Y:16379946-G-T | P6_Dst | ** | ||||||
| hg19:Y:18584031-T-C hg38:Y:16472151-T-C | ** | |||||||
| hg19:Y:18655880-C-A hg38:Y:16544000-C-A | ** | |||||||
| hg19:Y:18661692-C-A hg38:Y:16549812-C-A | ** | |||||||
| hg19:Y:18789689-C-A hg38:Y:16677809-C-A | ** | |||||||
| hg19:Y:18789704-A-G hg38:Y:16677824-A-G | ** | |||||||
| hg19:Y:18826614-C-A hg38:Y:16714734-C-A | ** | |||||||
| hg19:Y:18902997-C-A hg38:Y:16791117-C-A | ** | |||||||
| hg19:Y:18905554-C-A hg38:Y:16793674-C-A | ** | |||||||
| hg19:Y:18940788-A-G hg38:Y:16828908-A-G | ** | |||||||
| hg19:Y:19001236-C-A hg38:Y:16889356-C-A | ** | |||||||
| hg19:Y:19146640-C-A hg38:Y:17034760-C-A | ** | |||||||
| hg19:Y:19378007-C-A hg38:Y:17266127-C-A | ** | |||||||
| hg19:Y:19476483-C-T hg38:Y:17364603-C-T | ** | |||||||
| hg19:Y:19551736-C-A hg38:Y:17439856-C-A | ** | |||||||
| hg19:Y:19558430-C-T hg38:Y:17446550-C-T | ** | |||||||
| hg19:Y:19567042-C-A hg38:Y:17455162-C-A | ** | |||||||
| hg19:Y:19751468-A-G hg38:Y:17639588-A-G | P5_Prx | ** | ||||||
| hg19:Y:19924679-T-A hg38:Y:17812799-T-A | P5_Prx | ** | ||||||
| hg19:Y:20440389-C-A hg38:Y:18278503-C-A | P5_Dst | ** | ||||||
| hg19:Y:20632025-G-T hg38:Y:18470139-G-T | P4_Prx | ** | ||||||
| hg19:Y:21092713-C-A hg38:Y:18930827-C-A | ** | |||||||
| hg19:Y:21105476-T-G hg38:Y:18943590-T-G | ** | |||||||
| hg19:Y:21113032-C-A hg38:Y:18951146-C-A | ** | |||||||
| hg19:Y:21125231-C-T hg38:Y:18963345-C-T | ** | |||||||
| hg19:Y:21146313-C-A hg38:Y:18984427-C-A | ** | |||||||
| hg19:Y:21162389-C-A hg38:Y:19000503-C-A | ** | |||||||
| hg19:Y:21211378-A-C hg38:Y:19049492-A-C | ** | |||||||
| hg19:Y:21212789-C-A hg38:Y:19050903-C-A | ** | |||||||
| hg19:Y:21240446-TTG-T hg38:Y:19078560-TTG-T | ** | |||||||
| hg19:Y:21244800-A-G hg38:Y:19082914-A-G | ** | |||||||
| hg19:Y:21262186-C-A hg38:Y:19100300-C-A | ** | |||||||
| hg19:Y:21323596-T-C hg38:Y:19161710-T-C | ** | |||||||
| hg19:Y:21336194-G-T hg38:Y:19174308-G-T | ** | |||||||
| hg19:Y:21362411-C-A hg38:Y:19200525-C-A | ** | |||||||
| hg19:Y:21393944-C-A hg38:Y:19232058-C-A | ** | |||||||
| hg19:Y:21434976-C-A hg38:Y:19273090-C-A | FT112064 | ** | ||||||
| hg19:Y:21462452-A-T hg38:Y:19300566-A-T | ** | |||||||
| hg19:Y:21713469-C-T hg38:Y:19551583-C-T | ** | |||||||
| hg19:Y:21713471-C-G hg38:Y:19551585-C-G | ** | |||||||
| hg19:Y:21738796-G-A hg38:Y:19576910-G-A | ** | |||||||
| hg19:Y:21840927-C-A hg38:Y:19679041-C-A | ** | |||||||
| hg19:Y:21890910-T-A hg38:Y:19729024-T-A | ** | |||||||
| hg19:Y:22037605-A-G hg38:Y:19875719-A-G | ** | |||||||
| hg19:Y:22075757-A-C hg38:Y:19913871-A-C | ** | |||||||
| hg19:Y:22079726-T-C hg38:Y:19917840-T-C | ** | |||||||
| hg19:Y:22086017-C-A hg38:Y:19924131-C-A | ** | |||||||
| hg19:Y:22211596-AC-A hg38:Y:20049710-AC-A | ** | |||||||
| hg19:Y:22263756-A-G hg38:Y:20101870-A-G | DYZ19 | ** | ||||||
| hg19:Y:22549983-A-G hg38:Y:20388097-A-G | ** | |||||||
| hg19:Y:22729556-C-A hg38:Y:20567670-C-A | ** | |||||||
| hg19:Y:22775562-C-A hg38:Y:20613676-C-A | ** | |||||||
| hg19:Y:22824850-C-A hg38:Y:20662964-C-A | ** | |||||||
| hg19:Y:22855357-T-C hg38:Y:20693471-T-C | ** | |||||||
| hg19:Y:22904341-A-G hg38:Y:20742455-A-G | ** | |||||||
| hg19:Y:22991250-G-T hg38:Y:20829364-G-T | ** | |||||||
| hg19:Y:23441323-C-A hg38:Y:21279437-C-A | ** | |||||||
| hg19:Y:23563660-C-A hg38:Y:21401774-C-A | ** | |||||||
| hg19:Y:23778123-A-G hg38:Y:21616237-A-G | ** | |||||||
| hg19:Y:23779666-C-G hg38:Y:21617780-C-G | ** | |||||||
| hg19:Y:23779668-T-C hg38:Y:21617782-T-C | ** | |||||||
| hg19:Y:23779669-G-A hg38:Y:21617783-G-A | ** | |||||||
| hg19:Y:23779680-T-C hg38:Y:21617794-T-C | ** | |||||||
| hg19:Y:23779682-TA-T hg38:Y:21617796-TA-T | ** | |||||||
| hg19:Y:23779685-A-G hg38:Y:21617799-A-G | ** | |||||||
| hg19:Y:23788038-G-T hg38:Y:21626152-G-T | ** | |||||||
| hg19:Y:24472521-C-A hg38:Y:22326374-C-A | ** | |||||||
| hg19:Y:24512814-G-T hg38:Y:22366667-G-T | ** | |||||||
| hg19:Y:24904572-C-A hg38:Y:22758425-C-A | g1 | ** | ||||||
| hg19:Y:25733089-A-G hg38:Y:23586942-A-G | P1_b3 | ** | ||||||
| hg19:Y:25995031-C-CTATA hg38:Y:23848884-C-CTATA | P1_Y1 | 12×TA | ** | |||||
| hg19:Y:27038053-C-T hg38:Y:24891906-C-T | P1_r4 | ** | ||||||
| hg19:Y:28464588-G-T hg38:Y:26318441-G-T | ** | |||||||
| hg19:Y:28496885-C-A hg38:Y:26350738-C-A | ** | |||||||
| hg19:Y:28521651-C-G hg38:Y:26375504-C-G | ** | |||||||
| hg19:Y:28558180-A-G hg38:Y:26412033-A-G | ** | |||||||
| hg19:Y:28591061-G-C hg38:Y:26444914-G-C | ** | |||||||
| hg19:Y:28607830-T-G hg38:Y:26461683-T-G | ** | |||||||
| hg19:Y:28635664-T-A hg38:Y:26489517-T-A | ** | |||||||
| hg19:Y:28660002-C-A hg38:Y:26513855-C-A | ** | |||||||
| hg19:Y:28758187-G-A hg38:Y:26612040-G-A | ** | |||||||
| hg19:Y:28777919-C-G hg38:Y:26631772-C-G | ** | |||||||
| hg19:Y:28799085-A-G hg38:Y:26652938-A-G | ** | |||||||
| hg19:Y:28800588-T-C hg38:Y:26654441-T-C | ** | |||||||
| hg19:Y:28804412-T-A hg38:Y:26658265-T-A | ** | |||||||
| hg38:Y:56829808-C-A | ** | |||||||
| hg38:Y:56833414-C-A | ** | |||||||
| hg19:Y:7486123-C-A hg38:Y:7618082-C-A | IR1_L | *** | ||||||
| hg19:Y:10024032-C-CTCTT,T hg38:Y:10186423-C-CTCTT,T | *** | |||||||
| hg19:Y:19337751-C-A hg38:Y:17225871-C-A | *** | *** | ||||||
| hg19:Y:20036310-T-C hg38:Y:17924430-T-C | P5_Prx | *** | ||||||
| hg19:Y:22283067-A-C hg38:Y:20121181-A-C | DYZ19 | *** | ||||||
| hg19:Y:22310800-G-C hg38:Y:20148914-G-C | DYZ19 | *** | ||||||
| hg19:Y:22336752-G-C hg38:Y:20174866-G-C | DYZ19 | *** | ||||||
| hg19:Y:22346246-A-C hg38:Y:20184360-A-C | DYZ19 | *** | ||||||
| hg19:Y:22359029-G-A hg38:Y:20197143-G-A | DYZ19 | *** | ||||||
| hg19:Y:24113239-C-T hg38:Y:21967092-C-T | P3_b1 | *** | ||||||
| hg19:Y:25051610-T-C hg38:Y:22905463-T-C | g1 | *** | ||||||
| hg19:Y:26921037-T-C hg38:Y:24774890-T-C | P1_r3 | *** | ||||||
| hg38:Y:10934799-G-C | *** | |||||||
| hg19:Y:15975268-C-A hg38:Y:13863388-C-A | *** | |||||||
| hg19:Y:7564370-C-A hg38:Y:7696329-C-A | *** | |||||||
| hg38:Y:10986879-C-CTCCAT | *** | |||||||
| hg19:Y:13448848-C-A hg38:Y:11293172-C-A | *** | |||||||
| hg38:Y:10865936-G-T | *** | |||||||
| hg19:Y:4581638-ATT-A,AT hg38:Y:4713597-ATT-A,AT | 13×T | *** | ||||||
| hg38:Y:10812385-G-T | FTB31581 | *** | ||||||
| hg19:Y:3279589-G-A hg38:Y:3411548-G-A | *** | |||||||
| hg19:Y:3389855-C-A hg38:Y:3521814-C-A | *** | |||||||
| hg19:Y:6096493-C-A hg38:Y:6228452-C-A | *** | |||||||
| hg19:Y:6773668-C-CTCTG hg38:Y:6905627-C-CTCTG | *** | |||||||
| hg19:Y:7208073-C-A hg38:Y:7340032-C-A | *** | |||||||
| hg19:Y:7304309-C-A hg38:Y:7436268-C-A | *** | |||||||
| hg19:Y:8383207-C-A hg38:Y:8515166-C-A | *** | |||||||
| hg19:Y:8644306-G-GA hg38:Y:8776265-G-GA | *** | |||||||
| hg19:Y:8840729-G-T hg38:Y:8972688-G-T | *** | |||||||
| hg38:Y:9124400-G-T | *** | |||||||
| hg19:Y:9460965-G-A hg38:Y:9623356-G-A | *** | |||||||
| hg38:Y:10657314-G-A | *** | |||||||
| hg38:Y:10777933-C-CTCAAT | *** | |||||||
| hg38:Y:10824160-T-G | *** | |||||||
| hg38:Y:10824182-C-CGGATG | *** | |||||||
| hg38:Y:10824191-C-CGATTG | *** | |||||||
| hg38:Y:10934819-T-C | *** | |||||||
| hg38:Y:10992732-C-G | *** | |||||||
| hg19:Y:13194030-C-A hg38:Y:11038354-C-A | *** | |||||||
| hg19:Y:13196163-C-A hg38:Y:11040487-C-A | *** | |||||||
| hg19:Y:13209974-A-T hg38:Y:11054298-A-T | *** | |||||||
| hg19:Y:13488242-G-C hg38:Y:11332566-G-C | *** | |||||||
| hg19:Y:13488846-T-C hg38:Y:11333170-T-C | *** | |||||||
| hg19:Y:13503515-A-G hg38:Y:11347839-A-G | FGC33904 | *** | ||||||
| hg38:Y:11675682-G-T | DYZ17 | *** | ||||||
| hg38:Y:11675691-CGAATTTAATG-C | DYZ17 | *** | ||||||
| hg38:Y:11677503-C-A | DYZ17 | *** | ||||||
| hg19:Y:13824596-G-T hg38:Y:11703890-G-T | DYZ17 | *** | ||||||
| hg19:Y:14073084-G-A hg38:Y:11952378-G-A | *** | |||||||
| hg19:Y:15380110-A-G hg38:Y:13268230-A-G | *** | |||||||
| hg19:Y:16003050-C-T hg38:Y:13891170-C-T | *** | |||||||
| hg19:Y:16704208-C-A hg38:Y:14592328-C-A | *** | |||||||
| hg19:Y:16970407-G-A hg38:Y:14858527-G-A | FT180877 | *** | ||||||
| hg19:Y:17133981-C-A hg38:Y:15022101-C-A | *** | |||||||
| hg19:Y:17134006-C-A hg38:Y:15022126-C-A | *** | |||||||
| hg19:Y:17175079-G-T hg38:Y:15063199-G-T | *** | |||||||
| hg19:Y:17238423-C-A hg38:Y:15126543-C-A | *** | |||||||
| hg19:Y:17322025-G-T hg38:Y:15210145-G-T | *** | |||||||
| hg19:Y:17402695-C-A hg38:Y:15290815-C-A | *** | |||||||
| hg19:Y:18271115-C-A hg38:Y:16159235-C-A | *** | |||||||
| hg19:Y:18743474-C-A hg38:Y:16631594-C-A | *** | |||||||
| hg19:Y:19337517-C-A hg38:Y:17225637-C-A | *** | |||||||
| hg19:Y:19337633-CTT-C,CTTT hg38:Y:17225753-CTT-C,CTTT | 22×T | *** | ||||||
| hg19:Y:19505317-A-G hg38:Y:17393437-A-G | *** | |||||||
| hg19:Y:21329459-C-A hg38:Y:19167573-C-A | *** | |||||||
| hg19:Y:21939444-C-A hg38:Y:19777558-C-A | *** | |||||||
| hg19:Y:22146286-C-T hg38:Y:19984400-C-T | *** | |||||||
| hg19:Y:22159591-G-T hg38:Y:19997705-G-T | *** | |||||||
| hg19:Y:23187817-C-A hg38:Y:21025931-C-A | *** | |||||||
| hg19:Y:23514483-C-A hg38:Y:21352597-C-A | *** | |||||||
| hg19:Y:24001364-G-A hg38:Y:21855217-G-A | *** | |||||||
| hg19:Y:24482149-C-A hg38:Y:22336002-C-A | *** | |||||||
| hg38:Y:56830951-C-A | *** | |||||||
| hg38:Y:56831615-C-A | *** | |||||||
| hg38:Y:56832518-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: B5857 | 10327122 | 7416748 | 7473798 |
| Kit: B5857 | 9190217 | 7525485 | 7446474 |
| Used in age calculations | 10327122 | 7525485 | 7473798 |
| Counts of SNPs | 19 | 18 |
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