Rowley

Kane-BY3: 984642

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z2959 > Z46375 > DF106 > DF104 > DF105 > A18726 > A259 > Y19870 > FGC5939 > BY20602 > A6925 > BY20594 > FTA38648

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRKane-BY3
984642
19575893-T-TTCTC 17464013-T-TTCTC P5_Prx 19×TC+
21853677-C-CAAAA 19691791-C-CAAAA 43×A+
22360281-G-T 20198395-G-T DYZ19 +
13482196-TC-T 11326520-TC-T +
22360305-G-T 20198419-G-T DYZ19 +
10961539-CTCCCT-C +
10961457-ATTCCTC-A +
10961508-G-T +
10961518-ATTAC-A +
10961525-TC-T +
10985416-T-TTCCATTCCATTCCCTTCCAATCCACTCTATTCCATTCCACTCCACTCCATTCCACTCCACTCCTCTCCATTCCACTCCACTCCAGTCAAC +
56750013-A-T +
10961464-A-G +
10961473-A-T +
10961480-TCTACTCCATTCCACTCAATA-T +
12450522-C-CTTT 41×T+
22474707-TTCCAGAGTTTGTTACTTCAGATATGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGCTCACTTCAAGAACGAAGCTGCAGACCTTTGCGGTGAGTGATACAACACCGAAAGGTGTTATA-T 20312821-TTCCAGAGTTTGTTACTTCAGATATGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGCTCACTTCAAGAACGAAGCTGCAGACCTTTGCGGTGAGTGATACAACACCGAAAGGTGTTATA-T DYZ19 +
13460803-G-T 11305127-G-T +
13460808-A-C 11305132-A-C +
56750026-G-C +
13481455-C-CTGTAAG 11325779-C-CTGTAAG +
13481555-T-G 11325879-T-G +
19492290-C-CAAAAAAAA 17380410-C-CAAAAAAAA 37×A+
3499321-C-T 3631280-C-T +
15838880-T-G 13727000-T-G Y+
15838884-C-A 13727004-C-A Y+
22360288-T-A 20198402-T-A DYZ19 +
22476221-CTTCAGATGTGTCCAGAGTTTCTTCCTTCTGACAGGTTCCTGGCTTGCTCACTTCAAGAATGAAGCTGCAAACATTTGCGGTGAGTGTTGCAGCACTTAAAGTGTTATTTCCAGAGT-C 20314335-CTTCAGATGTGTCCAGAGTTTCTTCCTTCTGACAGGTTCCTGGCTTGCTCACTTCAAGAATGAAGCTGCAAACATTTGCGGTGAGTGTTGCAGCACTTAAAGTGTTATTTCCAGAGT-C DYZ19 +
23672293-T-TGCCCCCCC 21510407-T-TGCCCCCCC +
25300825-T-C 23154678-T-C P2_r1 +
56750025-G-A +
13450448-C-G 11294772-C-G *
9160320-A-AAC 9322711-A-AAC 17×AC*
13469880-G-A 11314204-G-A BY85823 *
14286784-C-CTT 12166078-C-CTT 22×T*
58833966-TCCATTCCATA-T 56756885-GATGGAATGGT-G *
22225925-A-C 20064039-A-C ZS4165 DYZ19 *
24971082-CTT-C 22824935-CTT-C g1 14×T*
13635945-TG-T 11480269-TG-T *
13351889-A-C 11196213-A-C *
13351895-T-C 11196219-T-C *
13636000-G-A 11480324-G-A *
10029163-A-G 10191554-A-G Y*
28550174-A-G 26404027-A-G CTS12258 M4953 *
13278831-C-T 11123155-C-T *
13496180-C-T 11340504-C-T *
6403276-A-T 6535235-A-T *
3166421-C-A 3298380-C-A *
4870602-CTG-C 5002561-CTG-C 8×TG*
5225260-GTA-G 5357219-GTA-G *
8883602-AAC-A 9015561-AAC-A 8×AC*
9939087-C-G 10101478-C-G Y*
13246215-T-C 11090539-T-C *
13259447-A-T 11103771-A-T FGC81456 *
13259539-G-C 11103863-G-C *
13259542-C-A 11103866-C-A *
13259808-G-C 11104132-G-C *
13263609-C-T 11107933-C-T *
13279891-G-A 11124215-G-A *
13287957-A-T 11132281-A-T *
13292383-CT-C 11136707-CT-C *
13302634-G-A 11146958-G-A *
13302939-A-T 11147263-A-T *
13309130-T-C 11153454-T-C *
13368146-A-G 11212470-A-G *
13386554-T-C 11230878-T-C *
13494531-AAT-A 11338855-AAT-A *
13507536-A-C 11351860-A-C *
13509278-G-A 11353602-G-A *
13524938-A-G 11369262-A-G *
13534839-T-C 11379163-T-C *
13553211-T-A 11397535-T-A *
13553223-A-G 11397547-A-G *
13555848-G-T 11400172-G-T *
13574421-A-G 11418745-A-G *
13574443-A-T 11418767-A-T *
13635933-C-T 11480257-C-T ZS7777 *
17383033-CAT-C 15271153-CAT-C FT8753 *
17561990-G-T 15450110-G-T FT419317 YY17×T*
18703927-GGA-G 16592047-GGA-G 9×GA*
28780709-A-C 26634562-A-C *
59030587-T-TAA 56884440-T-TAA *
13472038-G-T 11316362-G-T *
24573423-CTT-C 22427276-CTT-C P3_t2 21×T*
13740224-A-G 11584548-A-G *
17919855-G-GAAAAAAAAA 15807975-G-GAAAAAAAAA 25×A*
5539269-C-T 5671228-C-T *
5770569-G-A 5902528-G-A FT325020 *
8426304-TTG-T 8558263-TTG-T *
8877365-TTG-T 9009324-TTG-T 8×TG*
9939063-G-A 10101454-G-A Y*
9939086-T-G 10101477-T-G Y*
13243462-G-A 11087786-G-A *
13258510-C-T 11102834-C-T *
13265930-G-T 11110254-G-T *
13267505-C-T 11111829-C-T *
13269787-T-C 11114111-T-C *
13270670-G-A 11114994-G-A *
13270702-G-A 11115026-G-A *
13271447-A-G 11115771-A-G *
13272793-G-A 11117117-G-A *
13272915-C-T 11117239-C-T *
13272930-G-A 11117254-G-A *
13282461-C-A 11126785-C-A *
13285653-C-CG 11129977-C-CG *
13286736-C-T 11131060-C-T *
13292382-C-A 11136706-C-A *
13362880-G-C 11207204-G-C *
13415840-CCAAT-C 11260164-CCAAT-C *
13460482-C-T 11304806-C-T *
13688492-G-A 11532816-G-A *
13722661-T-C 11566985-T-C *
13722677-G-T 11567001-G-T *
16527727-TTC-T 14415847-TTC-T *
19073869-TAC-T 16961989-TAC-T 10×AC*
22483739-C-A 20321853-C-A FGC75614 DYZ19 *
22483742-T-G 20321856-T-G ZS1158 DYZ19 *
22508458-C-G 20346572-C-G DYZ19 *
58976362-T-TCCAC 56830215-T-TCCAC *
58978853-CTCCAG-C 56832706-CTCCAG-C *
59006987-A-C 56860840-A-C *
59008043-G-T 56861896-G-T *
59010749-A-C 56864602-A-C *
59011009-T-C 56864862-T-C *
59024547-A-T 56878400-A-T *
9985041-G-A 10147432-G-A Y*
13485739-A-G 11330063-A-G *
58972510-C-T 56826363-C-T *
9944596-A-T 10106987-A-T Y*
9944628-G-A 10107019-G-A Y*
13482148-C-A 11326472-C-A *
13488912-C-T 11333236-C-T *
22509606-T-G 20347720-T-G FT90132 DYZ19 *
22509615-T-G 20347729-T-G DYZ19 *
59003025-T-A 56856878-T-A *
13474451-G-C 11318775-G-C *
58848085-G-C 56742786-C-G *
13721425-TCA-T 11565749-TCA-T *
13728845-G-C 11573169-G-C *
22510035-T-C 20348149-T-C DYZ19 *
13737164-G-A 11581488-G-A *
22508449-G-T 20346563-G-T DYZ19 *
22508468-T-C 20346582-T-C DYZ19 *
13287961-T-C 11132285-T-C *
9984234-T-C 10146625-T-C Y*
58883969-A-T 56706902-T-A *
10029207-A-T 10191598-A-T Y*
18511565-C-CATATAT 16399685-C-CATATAT P6_Dst 20×AT*
13460669-A-T 11304993-A-T *
13474293-G-C 11318617-G-C *
22447411-G-T 20285525-G-T DYZ19 *
22509244-T-G 20347358-T-G DYZ19 *
13469886-C-A 11314210-C-A *
13478177-G-A 11322501-G-A *
13607662-G-T 11451986-G-T FGC26089 *
9211247-AAC-A 9373638-AAC-A 18×AC*
13301535-T-G 11145859-T-G *
13489192-G-T 11333516-G-T *
56830319-A-ATTCCACTCCATTCCT *
28799778-G-C 26653631-G-C *
23514471-TTC-T 21352585-TTC-T *
13474701-G-T 11319025-G-T *
15259117-TA-T 13147201-TA-T 9×A*
13639122-G-A 11483446-G-A *
13639125-A-G 11483449-A-G *
13639181-A-C 11483505-A-C *
13697227-T-A 11541551-T-A *
13488844-G-GCA 11333168-G-GCA *
10978903-C-T *
13605789-A-AT 11450113-A-AT 10×T*
7803116-GAA-G 7935075-GAA-G 14×A*
13620448-T-TA 11464772-T-TA 14×A*
13460659-C-T 11304983-C-T *
13696785-G-T 11541109-G-T *
13466301-G-T 11310625-G-T *
13701891-A-C 11546215-A-C *
13473768-G-T 11318092-G-T *
56862005-G-C *
19309464-C-T 17197584-C-T YY*
16369735-G-GAA 14257855-G-GAA 15×A*
26099803-T-TTC 23953656-T-TTC P1_Y1 9×TC*
8563701-G-GT 8695660-G-GT 8×T*
56842384-T-G *
8272545-G-GT 8404504-G-GT 10×T*
13472046-A-G 11316370-A-G FT444075 *
13639126-A-G 11483450-A-G *
13489802-C-A 11334126-C-A *
13489814-G-C 11334138-G-C *
13466447-G-T 11310771-G-T *
18569414-CT-C 16457534-CT-C 9×T*
12807338-CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-C 43×T*
7174481-C-CT 7306440-C-CT 8×T*
6027539-AT-A 6159498-AT-A 10×T*
13593090-C-T 11437414-C-T *
13636850-T-TA 11481174-T-TA 10×A*
13697328-G-T 11541652-G-T *
17153581-GT-G 15041701-GT-G *
14456868-CA-C 12336141-CA-C 9×A*
13712587-T-A 11556911-T-A *
13491011-C-A 11335335-C-A *
11023178-C-T *
3648238-GA-G 3780197-GA-G 10×A*
13463186-G-T 11307510-G-T BY85650 *
56829507-GTCCAT-G,GTCCATTCCAT 4×TCCAT*
9596493-ATGTG-A 9758884-ATGTG-A IR3_Prx 12×TG*
56842449-G-T *
19356963-CAAAA-C 17245083-CAAAA-C 14×A*
13478602-C-A 11322926-C-A *
22895787-AT-A 20733901-AT-A 10×T*
10756189-T-C *
13507077-AC-A 11351401-AC-A *
14745420-CTTT-C 12633489-CTTT-C 12×T*
13272696-A-G 11117020-A-G *
13471136-C-T 11315460-C-T *
6776497-CAAAAAA-C 6908456-CAAAAAA-C 28×A*
3044717-CT-C 3176676-CT-C 9×T*
10917971-T-C *
20842497-G-A 18680611-G-A P4_Dst *
13471161-G-T 11315485-G-T *
13471169-A-T 11315493-A-T *
13471171-A-C 11315495-A-C *
13468288-T-A 11312612-T-A *
10911206-C-A *
13474689-A-T 11319013-A-T *
13480374-G-C 11324698-G-C *
13470611-A-G 11314935-A-G *
13462120-G-T 11306444-G-T *
13480343-C-A 11324667-C-A *
3967284-G-A 4099243-G-A *
3967287-A-G 4099246-A-G *
59003044-C-T 56856897-C-T *
22231188-C-A 20069302-C-A DYZ19 *
13555817-T-A 11400141-T-A *
28565722-TTATA-T 26419575-TTATA-T 13×TA*
13470617-G-T 11314941-G-T *
13474277-C-A 11318601-C-A *
13481476-C-A 11325800-C-A *
13482240-C-A 11326564-C-A *
13490986-T-C 11335310-T-C *
13509317-A-G 11353641-A-G *
13510315-C-T 11354639-C-T *
13540422-T-C 11384746-T-C *
13540448-G-T 11384772-G-T *
13555794-A-G 11400118-A-G *
13555833-G-A 11400157-G-A *
13693297-G-A 11537621-G-A *
13730083-C-G 11574407-C-G *
22509559-T-A 20347673-T-A DYZ19 *
28811050-A-T 26664903-A-T *
28819189-T-A 26673042-T-A *
10029155-A-T 10191546-A-T Y*
10029174-G-T 10191565-G-T Y*
13266022-G-T 11110346-G-T *
13419993-A-T 11264317-A-T *
13485975-C-T 11330299-C-T *
13491032-C-G 11335356-C-G *
13491034-A-C 11335358-A-C *
13491053-C-T 11335377-C-T *
13509325-C-T 11353649-C-T *
13512434-T-C 11356758-T-C *
13553140-A-C 11397464-A-C *
13555806-C-T 11400130-C-T *
13555814-C-T 11400138-C-T *
28807910-T-C 26661763-T-C FT462461 *
19309466-C-T 17197586-C-T YY*
13490991-A-C 11335315-A-C *
13712553-G-A 11556877-G-A *
13369633-T-G 11213957-T-G *
13369638-G-A 11213962-G-A *
13369641-A-T 11213965-A-T *
7362048-T-TTA,TTATA 7494007-T-TTA,TTATA 10×TA*
56855226-TAATA-T *
17561991-T-G 15450111-T-G YY*
13478526-G-T 11322850-G-T *
13478527-G-T 11322851-G-T *
13285631-C-T 11129955-C-T *
13591357-T-G 11435681-T-G *
13591366-A-G 11435690-A-G *
13342392-C-G 11186716-C-G *
13347531-T-C 11191855-T-C *
13591356-T-G 11435680-T-G *
13463251-C-A 11307575-C-A *
6758708-C-A 6890667-C-A YY*
13250390-T-A 11094714-T-A *
13250395-C-G 11094719-C-G *
13404713-A-T 11249037-A-T *
13416556-C-T 11260880-C-T *
19644383-GT-G 17532503-GT-G P5_Prx 10×T*
13951501-G-GTA 11830795-G-GTA 9×TA*
13470479-C-A 11314803-C-A *
13470515-C-T 11314839-C-T *
28723552-A-AT 26577405-A-AT 10×T*
13461266-A-C 11305590-A-C *
56822627-T-A *
23541408-C-CAA 21379522-C-CAA 17×A*
13467932-T-C 11312256-T-C *
28580057-G-A 26433910-G-A *
13339809-A-T 11184133-A-T *
13249505-A-G 11093829-A-G *
56707471-A-C *
9939050-C-T 10101441-C-T Y*
9939057-T-C 10101448-T-C Y*
13535178-T-G 11379502-T-G *
26455900-CTT-C 24309753-CTT-C P1_Y1 22×T*
28580052-A-G 26433905-A-G *
13416513-G-C 11260837-G-C *
13435132-G-T 11279456-G-T *
13435916-A-AT 11280240-A-AT *
13479546-T-A 11323870-T-A *
13251368-A-T 11095692-A-T *
13377870-A-G 11222194-A-G *
13261762-CT-C 11106086-CT-C 8×T*
9340831-AAC-A,AACACAC 9503222-AAC-A,AACACAC 22×AC*
6040789-CAAAAA-C 6172748-CAAAAA-C 22×A*
13420231-G-A 11264555-G-A *
24503106-C-CAAA 22356959-C-CAAA 16×A*
5770593-T-C 5902552-T-C *
5770595-T-C 5902554-T-C *
19309468-C-T 17197588-C-T YY*
14854993-G-GT 12743059-G-GT 9×T*
13477212-A-T 11321536-A-T *
6489371-C-CAAA 6621330-C-CAAA 25×A*
13251200-A-G 11095524-A-G *
13466797-T-C 11311121-T-C *
13479634-C-A 11323958-C-A *
13506065-G-A 11350389-G-A *
9320548-AACACACACACAC-A,AAC 9482939-AACACACACACAC-A,AAC 20×AC*
13472110-T-C 11316434-T-C *
13489696-C-CA 11334020-C-CA *
13489705-A-ACATG 11334029-A-ACATG *
13551328-A-AGG 11395652-A-AGG *
13551332-TAA-T 11395656-TAA-T *
13693685-CCTAG-C 11538009-CCTAG-C *
13693693-GGAATGA-G 11538017-GGAATGA-G *
28587200-T-A 26441053-T-A *
28587205-T-A 26441058-T-A *
56825979-GCATTCCATTCGAGTTCATTCCATTCGAGTTCCTTCCATTCGAGTT-G *
56827687-T-C,TGCCATCCGATTGCATGCCATCCGATTC *
9984607-G-T 10146998-G-T Y*
13469937-C-CAA 11314261-C-CAA *
13478619-T-C 11322943-T-C *
13487975-C-A 11332299-C-A *
9939064-C-G 10101455-C-G Y*
9984236-C-G 10146627-C-G Y*
13474286-C-T 11318610-C-T *
13478171-G-A 11322495-G-A *
13478190-CGGG-C 11322514-CGGG-C *
13712863-C-A 11557187-C-A *
6402017-A-ATGATGT 6533976-A-ATGATGT *
6402018-C-CGTAAAATACCGACGTATATCTTATATTCACT 6533977-C-CGTAAAATACCGACGTATATCTTATATTCACT *
13463187-C-A 11307511-C-A *
13463208-G-T 11307532-G-T *
13267936-CATTTTTTTATTTTTAGTAGAGATAGGGTATCACCATGTTGGG-C 11112260-CATTTTTTTATTTTTAGTAGAGATAGGGTATCACCATGTTGGG-C *
13489566-GC-G 11333890-GC-G *
13265888-G-T 11110212-G-T *
13269594-CAAA-C 11113918-CAAA-C *
13372460-T-C 11216784-T-C *
13378377-A-G 11222701-A-G *
13480311-A-T 11324635-A-T *
56835359-TCC-T *
22511462-A-C 20349576-A-C DYZ19 *
28819196-GCA-G 26673049-GCA-G *
28819199-T-TGA 26673052-T-TGA *
5986595-GTTTTTT-G 6118554-GTTTTTT-G 28×T*
13460619-G-T 11304943-G-T *
13474733-A-T 11319057-A-T *
13479068-G-C 11323392-G-C *
13469159-A-T 11313483-A-T *
26320658-TAA-T 24174511-TAA-T P1_Y1 14×A*
13470456-T-A 11314780-T-A *
13470457-A-C 11314781-A-C *
10978918-C-T *
13638498-C-G 11482822-C-G *
9985057-T-C 10147448-T-C Y*
13372471-A-G 11216795-A-G *
13373099-G-A 11217423-G-A *
13469894-T-G 11314218-T-G *
13479125-G-A 11323449-G-A *
13487275-A-G 11331599-A-G *
13487282-A-AAG 11331606-A-AAG *
56842463-T-A *
13478479-CAG-C 11322803-CAG-C *
13478483-T-TTC 11322807-T-TTC *
13469889-G-A 11314213-G-A *
13478193-G-GAA 11322517-G-GAA *
56831838-TATTCCA-T *
13469182-G-T 11313506-G-T *
13469840-A-T 11314164-A-T *
13469871-G-A 11314195-G-A *
13469878-T-A 11314202-T-A *
13737378-C-G 11581702-C-G *
13470578-C-T 11314902-C-T *
13487280-G-T 11331604-G-T *
22449393-A-T 20287507-A-T DYZ19 *
13730073-T-C 11574397-T-C *
13730084-A-G 11574408-A-G *
56842412-G-T *
13258360-T-G 11102684-T-G *
13451163-T-TCCTCTGCACTCCACTCCACTGC 11295487-T-TCCTCTGCACTCCACTCCACTGC *
13460611-C-T 11304935-C-T *
22220555-C-A 20058669-C-A DYZ19 *
13485945-G-T 11330269-G-T *
13272416-C-T 11116740-C-T *
13272438-A-G 11116762-A-G *
13470605-C-G 11314929-C-G *
13470625-CACT-C 11314949-CACT-C *
13470630-C-CATA 11314954-C-CATA *
13601541-G-C 11445865-G-C *
13692959-G-C 11537283-G-C *
22509542-G-A 20347656-G-A DYZ19 *
22509582-T-C 20347696-T-C DYZ19 *
22509625-T-A 20347739-T-A DYZ19 *
13259786-AGGGTCAGGGGTTAG-A 11104110-AGGGTCAGGGGTTAG-A *
13259830-G-A 11104154-G-A *
13489241-A-T 11333565-A-T *
13252679-T-C 11097003-T-C *
13466813-C-A 11311137-C-A *
13466816-T-A 11311140-T-A *
13466821-A-C 11311145-A-C *
13364785-T-G 11209109-T-G *
13474764-A-T 11319088-A-T *
22449371-A-G 20287485-A-G DYZ19 *
13478499-T-C 11322823-T-C *
2919273-G-A 3051232-G-A *
22295392-T-C 20133506-T-C DYZ19 *
11021497-CACTCCTCCCT-C *
56861004-A-C *
13506068-A-G 11350392-A-G *
8888375-C-CTTTTT 9020334-C-CTTTTT 25×T*
13506070-T-A 11350394-T-A *
13466514-G-C 11310838-G-C *
13479628-C-A 11323952-C-A *
28799752-G-T 26653605-G-T *
56876123-GCAAAAAAAAAAAAAAAAAAAAAAAAA-G *
56876150-A-G *
13488487-GGC-G 11332811-GGC-G *
13479590-C-G 11323914-C-G *
13479604-G-C 11323928-G-C *
13479120-A-C 11323444-A-C *
28582688-T-A 26436541-T-A *
56861822-A-ACAAACAAAC *
13513926-A-G 11358250-A-G *
13748486-T-C 11592810-T-C *
13267778-C-CCCCG 11112102-C-CCCCG *
6250489-TAC-T 6382448-TAC-T IR3_Dst *
5452626-CTT-C 5584585-CTT-C 11×T*
13489234-T-C,G 11333558-T-C,G *
13474306-T-C 11318630-T-C *
13489286-TG-T 11333610-TG-T *
27547266-AT-A 25401119-AT-A P1_Y2 9×T*
28818209-ATGGAATGGAATGGAG-A 26672062-ATGGAATGGAATGGAG-A *
13474418-G-T 11318742-G-T *
24109382-CCT-C 21963235-CCT-C P3_b1 *
13474536-GTCACAATGCCGCCTTTTGGCAGAGCCTAGACAAGGGTTACATCACCTGGGTGATCAGTGCAGAGATA-G 11318860-GTCACAATGCCGCCTTTTGGCAGAGCCTAGACAAGGGTTACATCACCTGGGTGATCAGTGCAGAGATA-G *
9960444-C-A 10122835-C-A Y*
18395723-TTATATATATATATATATATATATATATATA-T,TTA 16283843-TTATATATATATATATATATATATATATATA-T,TTA P6_Gap 27×TA*
23002853-GTATATATA-G,GTATATA 20840967-GTATATATA-G,GTATATA 17×TA*
2791124-T-C 2923083-T-C Y*
2951913-T-C 3083872-T-C *
3744243-C-CTTT 3876202-C-CTTT 11×T*
3940446-AT-A 4072405-AT-A 9×T*
4075251-A-C 4207210-A-C *
4443889-T-C 4575848-T-C *
5770561-C-G 5902520-C-G *
5770572-C-T 5902531-C-T *
5770575-C-T 5902534-C-T *
5770596-G-A 5902555-G-A *
5770612-G-C 5902571-G-C *
5770615-C-G 5902574-C-G *
5770617-G-A 5902576-G-A *
5770628-C-T 5902587-C-T *
5770629-C-G 5902588-C-G *
5949671-TAA-T 6081630-TAA-T 10×A*
8181292-T-G 8313251-T-G YY*
9195663-T-G 9358054-T-G Y*
10661339-T-TTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAG *
10673574-CTCCAT-C *
10847948-ACTCCATTCCACTCCACTCTT-A *
13243598-GTCTA-G 11087922-GTCTA-G *
13384905-G-A 11229229-G-A *
13384913-T-C 11229237-T-C *
13450792-G-A 11295116-G-A *
13465089-T-C 11309413-T-C *
13465115-A-G 11309439-A-G *
13472361-G-A 11316685-G-A *
13474314-G-T 11318638-G-T *
13479549-T-C 11323873-T-C *
13481463-A-AGTGCAGAGATATGTCATAAATCTCACAGAAG,AGTGCAGAGATATGTCATAAGTCTCACAGAAG 11325787-A-AGTGCAGAGATATGTCATAAATCTCACAGAAG,AGTGCAGAGATATGTCATAAGTCTCACAGAAG *
13541228-C-G 11385552-C-G *
13708508-C-G 11552832-C-G *
13715559-A-T 11559883-A-T *
13726495-G-A 11570819-G-A *
13733901-G-A 11578225-G-A *
13733914-C-T 11578238-C-T *
13745405-A-G 11589729-A-G *
13745414-G-C 11589738-G-C *
12308680-TTA-T,TTATATA 14×TA*
14632354-A-T 12520423-A-T Y*
14880266-A-T 12768336-A-T YY*
15420151-G-T 13308271-G-T YY*
15558431-G-GAGATAGATAGAT,GAGATAGATAGATAGAT 13446551-G-GAGATAGATAGAT,GAGATAGATAGATAGAT 17×AGAT*
16238542-A-C 14126662-A-C YY*
18017108-G-GAT,GATATAT 15905228-G-GAT,GATATAT 22×AT*
18079671-C-A 15967791-C-A Y*
18232033-CT-C,CTT 16120153-CT-C,CTT 11×T*
18297504-AATATATAT-A,AAT 16185624-AATATATAT-A,AAT P6_Prx 16×AT*
18699739-CCTCT-C 16587859-CCTCT-C 8×CT*
19352426-G-A 17240546-G-A Y*
19352430-G-A 17240550-G-A Y*
19352431-G-A 17240551-G-A Y*
21608074-AAAAAC-A 19446188-AAAAAC-A *
22220535-G-T 20058649-G-T DYZ19 *
22225947-C-A 20064061-C-A DYZ19 *
22231183-AAT-A 20069297-AAT-A DYZ19 *
22231189-G-GTT 20069303-G-GTT DYZ19 *
22447350-A-T 20285464-A-T DYZ19 *
22447396-T-A 20285510-T-A DYZ19 *
22449380-A-G 20287494-A-G DYZ19 *
22472984-G-A 20311098-G-A DYZ19 *
22473015-A-C 20311129-A-C DYZ19 *
23488834-T-TAAAAAAAAA 21326948-T-TAAAAAAAAA 30×A*
26433572-CTTTTT-C 24287425-CTTTTT-C P1_Y1 19×T*
56830214-A-AC *
56842427-C-A,T *

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.