Tree Position

A0-T-YP2191 > P305[A1] > A1b > BT/A1b2 > M168/PF1416[CT] > P143[CF] > M89/PF2746[F] > F1329/M3658[GHI > F929[HIJK] > IJK > K > M526[K2] > P295[P] > M207[R] > M173[R1] > L146/M420[R1a] > M459 > M198 > M417 > Z645 > Z283 > Z282 > Z2913 > 7460739-G-T > 7339125-G-C

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRKane-BY3
IN97523
3640482-C-CCTTTCTTT 3772441-C-CCTTTCTTT 13×CTTT+
17349378-C-CAAAA 15237498-C-CAAAA 52×A+
9030408-A-AGAAAGGAAAG 9192799-A-AGAAAGGAAAG 17×GAAAG+
22438754-T-A 20276868-T-A DYZ19 +
13834365-C-T 11713659-C-T BY90964 +
8644324-C-CAAAAAAAA 8776283-C-CAAAAAAAA 32×A+
13859387-G-GTGGAATGGAA 11738681-G-GTGGAATGGAA 11×TGGAA+
17319971-G-GAGAAAGAAAGAAAGAA 15208091-G-GAGAAAGAAAGAAAGAA 13×AGAA+
13480908-C-A 11325232-C-A +
27617980-C-CAAA 25471833-C-CAAA P1_Y2 29×A+
13466360-C-A 11310684-C-A +
13485561-C-T 11329885-C-T +
23672293-T-TGCCCCCCCCCC 21510407-T-TGCCCCCCCCCC +
13480921-G-T 11325245-G-T +
4869972-A-G 5001931-A-G FTB42307 +
5592094-A-G 5724053-A-G FTB42382 +
5907229-G-T 6039188-G-T FTB42412 +
6537645-T-G 6669604-T-G +
6671103-TATTG-T 6803062-TATTG-T +
7415300-A-T 7547259-A-T FTB32675 YY+
7415641-G-T 7547600-G-T YY+
8764190-G-GC 8896149-G-GC +
9434959-G-T 9597350-G-T FTB32959 YY+
9882228-C-G 10044619-C-G FTA38866 YY+
10801953-C-CTCCAT +
10954099-T-A FTB41035 +
11662673-G-A FTB41036 +
13850835-T-C 11730129-T-C FTB42484 +
13866396-A-G 11745690-A-G FTB42486 +
13923530-C-CAA 11802824-C-CAA 29×A+
12450522-C-CTTTTTTTTTTT 41×T+
12675898-A-ATT 27×T+
16078458-T-C 13966578-T-C FTB33453 Y+
17317307-C-T 15205427-C-T YY+
17974496-C-T 15862616-C-T FT3085 Y+
19230628-A-T 17118748-A-T YY+
19481420-C-T 17369540-C-T YY+
21068459-T-A 18906573-T-A YY+
21723975-G-A 19562089-G-A FTB34257 YY+
21940037-C-CATATATATAT 19778151-C-CATATATATAT 22×AT+
22287164-G-T 20125278-G-T DYZ19 +
22428904-C-A 20267018-C-A DYZ19 +
22842687-G-T 20680801-G-T FTA41717 YY+
23832826-T-TCCCCC 21670940-T-TCCCCC +
28760981-A-G 26614834-A-G FT285270 Y+
19965303-CT-C 17853423-CT-C P5_Prx 10×T*
24991427-G-GT 22845280-G-GT g1 10×T*
24930128-CTT-C 22783981-CTT-C g1 20×T*
13711423-A-AG 11555747-A-AG *
22424594-T-G 20262708-T-G DYZ19 *
58981921-T-A 56835774-T-A *
58981056-C-A 56834909-C-A *
20970352-CA-C 18808466-CA-C P4_Dst 12×A*
27315588-G-GA 25169441-G-GA P1_g3 10×A*
13257301-T-A 11101625-T-A *
28534940-CTTT-C 26388793-CTTT-C 18×T*
19130738-C-CTTT 17018858-C-CTTT 33×T*
28478008-A-T 26331861-A-T 15×AT*
5872243-C-CA 6004202-C-CA 15×A*
13246902-A-G 11091226-A-G *
9700317-GAAC-G 9862708-GAAC-G IR3_Prx 7×AAC*
24107374-G-GA 21961227-G-GA P3_b1 12×A*
22254722-G-T 20092836-G-T DYZ19 *
13463994-A-T 11308318-A-T *
13253782-A-G 11098106-A-G *
16074806-A-T 13962926-A-T Y*
16074807-C-T 13962927-C-T Y*
13725390-C-G 11569714-C-G *
27914925-T-A 25768778-T-A P1_Y2 18×A*
3404731-GA-G 3536690-GA-G 11×A*
22271826-T-G 20109940-T-G BY20241 DYZ19 *
25504650-CTT-C 23358503-CTT-C P1_gr1 17×T*
4918916-T-TTA 5050875-T-TTA *
9964884-G-T 10127275-G-T Y*
21083512-TAG-T 18921626-TAG-T *
15260711-A-T 13148795-A-T YY*
9365370-C-G 9527761-C-G Y*
27761295-GA-G 25615148-GA-G P1_Y2 15×A*
25592446-AT-A 23446299-AT-A P1_gr1 14×T*
28804643-A-T 26658496-A-T *
9360705-T-G 9523096-T-G Y*
5228371-CGTGT-C 5360330-CGTGT-C 16×GT*
2795559-G-GTTTTT 2927518-G-GTTTTT 24×T*
3914660-A-AT 4046619-A-AT 10×T*
17951466-TCACA-T 15839586-TCACA-T 13×CA*
13706187-G-A 11550511-G-A *
28803418-A-G 26657271-A-G FGC50745 *
22253350-C-T 20091464-C-T DYZ19 *
9731616-G-GT 9894007-G-GT IR3_Prx 17×T*
13489625-ACC-A 11333949-ACC-A *
23619781-TA-T 21457895-TA-T 10×A*
13488700-C-T 11333024-C-T *
22447746-G-A 20285860-G-A BY17137BY181005 DYZ19 *
13418549-G-A 11262873-G-A *
21148624-G-T 18986738-G-T YY*
22302354-T-A 20140468-T-A DYZ19 *
22511092-G-C 20349206-G-C DYZ19 *
10043200-A-T 10205591-A-T *
6043970-CTTTTT-C 6175929-CTTTTT-C 22×T*
23976876-T-TTG 21830729-T-TTG 10×TG*
26299170-G-GA 24153023-G-GA P1_Y1 10×A*
26124427-C-CAAA 23978280-C-CAAA P1_Y1 31×A*
23825064-ATTTT-A 21663178-ATTTT-A 25×T*
4571254-C-CAA 4703213-C-CAA 29×A*
15260717-A-T 13148801-A-T YY*
22487878-T-G 20325992-T-G DYZ19 *
16692757-GAA-G 14580877-GAA-G 27×A*
24870883-C-A 22724736-C-A IR1_R *
7280952-CT-C,CTT 7412911-CT-C,CTT 26×T*
18426482-GAA-G 16314602-GAA-G P6_Gap 15×A*
19059747-CTTTTT-C 16947867-CTTTTT-C 25×T*
56846917-G-T *
13726435-C-A 11570759-C-A *
6265032-TCA-T 6396991-TCA-T IR3_Dst *
18994617-GGA-G 16882737-GGA-G *
16505988-CTT-C 14394108-CTT-C 31×T*
23552738-CA-C 21390852-CA-C 9×A*
22812629-CTTTT-C,CTT 20650743-CTTTT-C,CTT 28×T*
3804764-G-T 3936723-G-T *
2752725-C-CAA 2884684-C-CAA 18×A*
22920605-CTT-C,CT 20758719-CTT-C,CT 25×T*
10985209-C-A *
22970282-CAA-C,CAAA 20808396-CAA-C,CAAA 27×A*
13258777-ATT-A 11103101-ATT-A 11×T*
7270936-TA-T 7402895-TA-T 10×A*
13463959-C-A 11308283-C-A *
15684674-G-GA 13572794-G-GA 11×A*
8690208-ATTT-A 8822167-ATTT-A 29×T*
15276882-G-GAA 13164971-G-GAA 18×A*
14937028-AT-A 12825093-AT-A 9×T*
18849181-A-AT 16737301-A-AT 8×T*
21556919-C-CTTT 19395033-C-CTTT 23×T*
13483333-C-G 11327657-C-G *
23886557-C-CT 21724671-C-CT 10×T*
17006254-G-T 14894374-G-T YY*
13483295-A-T 11327619-A-T *
13194640-CT-C 11038964-CT-C *
10661726-T-C *
5409728-TTTTCTTTCTTTCTTTCTTTC-T,TTTTC 5541687-TTTTCTTTCTTTCTTTCTTTC-T,TTTTC 18×TTTC*
11016934-A-C *
14712485-A-C 12600552-A-C Y*
8218120-C-CTTCT,CTTCTTTCT 8350079-C-CTTCT,CTTCTTTCT 15×TTCT*
10772137-G-A FT430526 *
13254603-GTT-G 11098927-GTT-G 11×T*
22185855-C-CTT 20023969-C-CTT 25×T*
22230572-C-G 20068686-C-G DYZ19 *
15049694-G-A 12937785-G-A YY*
10939939-A-T *
18008688-GTTT-G 15896808-GTTT-G P7_Dst 17×T*
23572484-C-CGT 21410598-C-CGT 13×GT*
6027539-AT-A 6159498-AT-A 10×T*
4679748-AT-A 4811707-AT-A 9×T*
10924730-T-C *
13478578-G-A 11322902-G-A *
5430808-CA-C,CAA 5562767-CA-C,CAA 25×A*
3707259-C-CAT 3839218-C-CAT *
6177481-T-TTG,TTGTG 6309440-T-TTG,TTGTG IR3_Dst 23×TG*
15049684-T-C 12937775-T-C YY*
15507783-GT-G,GTT 13395903-GT-G,GTT 25×T*
14719578-TAA-T,TA 12607646-TAA-T,TA 19×A*
10924725-T-C *
13485658-T-C 11329982-T-C *
5308610-A-G 5440569-A-G *
13488752-G-A 11333076-G-A *
5231890-CTTT-C 5363849-CTTT-C 22×T*
15047718-ATCTT-A 12935809-ATCTT-A 4×TCTT*
11016935-A-C *
58905297-A-T 56685574-T-A *
6150064-C-A 6282023-C-A IR3_Dst *
3763439-CA-C 3895398-CA-C 10×A*
13272732-G-A 11117056-G-A *
7387396-ATT-A,ATTT 7519355-ATT-A,ATTT 22×T*
11003579-T-C *
17647550-A-AT 15535670-A-AT 9×T*
56850191-G-A *
11018787-C-A *
15684685-AT-A 13572805-AT-A *
19215831-C-CT 17103951-C-CT 9×T*
13483284-A-T 11327608-A-T *
22634856-TTTTATTTA-T,TTTTA 20472970-TTTTATTTA-T,TTTTA 11×TTTA*
7375249-C-CT 7507208-C-CT 9×T*
13477305-C-T 11321629-C-T *
22192943-A-C 20031057-A-C YY*
21086136-TA-T,TAA 18924250-TA-T,TAA 24×A*
10797953-T-C *
13267479-T-C 11111803-T-C *
13222079-G-GA 11066403-G-GA *
19391087-CTT-C 17279207-CTT-C 11×T*
13478356-C-T 11322680-C-T *
13223659-A-G 11067983-A-G *
10772138-T-A *
10772143-T-A *
13252918-G-A 11097242-G-A *
20937050-A-T 18775164-A-T P4_Dst 14×T*
16905870-C-CAAAA 14793990-C-CAAAA 25×A*
15491889-CTATA-C,CTA 13380009-CTATA-C,CTA 9×TA*
56862006-G-T *
5468173-CT-C,CTT 5600132-CT-C,CTT 26×T*
3259035-CAA-C,CA 3390994-CAA-C,CA 22×A*
3920370-A-G 4052329-A-G *
13606877-CAA-C,CAAA 11451201-CAA-C,CAAA 25×A*
10744379-C-T *
9316578-A-G 9478969-A-G Y*
10661746-C-T *
13199164-C-CA,CAAA 11043488-C-CA,CAAA 18×A*
13694010-A-C 11538334-A-C *
26124624-GGGAA-G 23978477-GGGAA-G P1_Y1 6×GGAA*
28529232-CA-C,CAA 26383085-CA-C,CAA 23×A*
17952596-A-C 15840716-A-C YY*
3061772-C-T 3193731-C-T *
4707512-C-CAA 4839471-C-CAA 18×A*
4067369-TAAAA-T 4199328-TAAAA-T 26×A*
13476558-C-T 11320882-C-T *
13479183-C-T 11323507-C-T *
17158968-CTT-C,CTTT 15047088-CTT-C,CTTT 26×T*
6089764-G-GTTT 6221723-G-GTTT 31×T*
18035665-CTTTT-C,CTTT 15923785-CTTTT-C,CTTT 30×T*
18861449-C-CT 16749569-C-CT 9×T*
10069769-C-G 10232160-C-G *
27454760-CTTTTT-C 25308613-CTTTTT-C P1_Y2 23×T*
4880709-GT-G,GTT 5012668-GT-G,GTT 22×T*
5815594-CA-C,CAA 5947553-CA-C,CAA 22×A*
21788661-C-CT 19626775-C-CT 8×T*
15208845-CAA-C,CAAA 13096931-CAA-C,CAAA 23×A*
14331131-CT-C,CTT 12210425-CT-C,CTT 25×T*
4498179-AT-A,ATT 4630138-AT-A,ATT 23×T*
16040802-C-CTT 13928922-C-CTT 16×T*
13488714-CCA-C 11333038-CCA-C *
9980783-G-A 10143174-G-A Y*
13297859-A-G 11142183-A-G *
13488706-CCG-C 11333030-CCG-C *
13488740-C-G 11333064-C-G *
13528328-T-TG 11372652-T-TG *
13528329-C-CTG 11372653-C-CTG *
26455924-A-T 24309777-A-T P1_Y1 *
13477272-G-A 11321596-G-A *
13263664-G-T 11107988-G-T *
13334920-A-ACG 11179244-A-ACG *
56886100-A-AC *
56886103-A-AC *
17584130-AT-A,ATTT 15472250-AT-A,ATTT 26×T*
4834245-T-TA,TAAA 4966204-T-TA,TAAA 23×A*
13730766-T-A 11575090-T-A *
16305924-CAA-C,CAAA 14194044-CAA-C,CAAA 24×A*
13275153-CT-C 11119477-CT-C 11×T*
13489670-G-A 11333994-G-A *
13489104-C-A 11333428-C-A *
13345325-G-T 11189649-G-T *
9964886-AATTTCCTGGGAACTTG-A 10127277-AATTTCCTGGGAACTTG-A *
56864091-A-T *
13478430-C-A 11322754-C-A *
56829960-CTCTACTCCACTCCAATCCATTCCACTCCACTCCAGTCCACTCCACTCCTTTCCATTCCATCCCATTCCATTCCACTCCTT- *
56830047-C- *
4025436-C-T 4157395-C-T *
2812777-A-ATTTTTTTTT 2944736-A-ATTTTTTTTT 30×T*
2845821-CA-C,CAA 2977780-CA-C,CAA 28×A*
2888903-G-T 3020862-G-T YY*
2989113-G-A 3121072-G-A *
3270924-ATT-A,ATTT 3402883-ATT-A,ATTT 25×T*
3403561-T- *
3838601-CTTT-C,CTTTTTTTTT 3970560-CTTT-C,CTTTTTTTTT 31×T*
3963833-CAA-C,CAAA 4095792-CAA-C,CAAA 22×A*
4174962-CT-C,CTTT 4306921-CT-C,CTTT 31×T*
4319761-C-G 4451720-C-G *
4392282-CAA-C,CAAAAAAA 4524241-CAA-C,CAAAAAAA 45×A*
4493451-TG-T 4625410-TG-T *
4683791-T-TA 4815750-T-TA 9×A*
4895672-C-CTTG 5027631-C-CTTG *
4964729-A-AT,AT 5096688-A-AT,AT 34×T*
5062473-CA-C,CAAA 5194432-CA-C,CAAA 21×A*
5174328-AAC-A,AACAC 5306287-AAC-A,AACAC 13×AC*
5261698-C-CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5393657-C-CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 48×A*
5308449-C-G 5440408-C-G *
5550280-G-GTTTTTTTT 5682239-G-GTTTTTTTT 39×T*
5785654-T-TAAAAAAAAAAAAAAAA 5917613-T-TAAAAAAAAAAAAAAAA 24×A*
5810598-C-A 5942557-C-A *
5937242-CTATATATA-C,CTATATA 6069201-CTATATATA-C,CTATATA 18×TA*
6091720-A-ATT 6223679-A-ATT 28×T*
6092948-C-CTTTTTTTTTT,CTTTTTTTTTT 6224907-C-CTTTTTTTTTT,CTTTTTTTTTT 39×T*
6149871-TAC-T,T 6281830-TAC-T,T IR3_Dst 17×AC*
6347814-G-GAAAGAA,GAAAGAA 6479773-G-GAAAGAA,GAAAGAA 12×AGAA*
6444836-CTATA-C,C 6576795-CTATA-C,C 12×TA*
6525752-C-A 6657711-C-A *
6525754-G-T 6657713-G-T *
6525767-T-A 6657726-T-A *
6597340-TAAAAAAA-T,TAAAAAAAA 6729299-TAAAAAAA-T,TAAAAAAAA 28×A*
6808134-CAA-C,CAAA 6940093-CAA-C,CAAA 22×A*
6858591-T-TA 6990550-T-TA *
6990552-T- *
7543598-A- *
7483638-TAAA-T 7615597-TAAA-T IR1_L 23×A*
7939472-TA-T,TAA 8071431-TA-T,TAA 35×A*
8465974-G-GT 8597933-G-GT *
8465975-G-GT 8597934-G-GT *
8568465-GTT-G,GTTT 8700424-GTT-G,GTTT 22×T*
8575956-ATT-A,ATTT 8707915-ATT-A,ATTT 28×T*
8702810-G-GTTTTT 8834769-G-GTTTTT 21×T*
8834981-C- *
8830435-TA-T 8962394-TA-T 10×A*
9198202-A-G 9360593-A-G Y*
9238826-A-G 9401217-A-G Y*
9304821-T-G 9467212-T-G Y*
9307374-CTGTGTGTGTGTGTGTGTGTGTCTTTGTGTGTGTG-C 9469765-CTGTGTGTGTGTGTGTGTGTGTCTTTGTGTGTGTG-C 10×TG*
9416731-G-GTTTTT 9579122-G-GTTTTT 23×T*
9960766-G-A 10123157-G-A Y*
9980777-A-G 10143168-A-G Y*
9980780-G-C 10143171-G-C Y*
10043199-C-A 10205590-C-A *
10043202-T-C 10205593-T-C *
10069767-C-T 10232158-C-T *
10069773-A-G 10232164-A-G *
10069777-T-C 10232168-T-C *
10632116-A-T *
10661720-A-ACTTTAC *
10661722-TC-T *
10661738-TGA-T *
10661741-C-CCA *
10661743-T-TC *
10748004-G-GCCATT,GCCATTCCATT *
10748673-ACTCTGTTCCATTCCATTCCATTCCGCTCCATTTCTTTCCGTTCTT-A *
10748732-C-T *
10851605-T-C *
10868112-TC-T *
10868125-A-T *
10889372-CAA-C *
10889376-T-TCC *
10924165-TTCCAC-T *
10924732-C-G *
10934978-A-C FT437188 *
10994801-C-A *
11003576-C-CA *
11006567-G-A *
11018781-C-CCACTT *
13242736-C-A 11087060-C-A *
13246474-C-T 11090798-C-T *
13246916-C-T 11091240-C-T *
13252447-T-C 11096771-T-C *
13252450-A-G 11096774-A-G *
13252452-C-T 11096776-C-T *
13252587-C-CG 11096911-C-CG 12×T*
13260841-TTG-T 11105165-TTG-T *
13270858-AG-A 11115182-AG-A *
13334891-A-C 11179215-A-C *
13338643-C-T 11182967-C-T *
13351186-CAAA-C,CAA 11195510-CAAA-C,CAA 20×A*
13364122-A-T 11208446-A-T *
13418552-T-C 11262876-T-C *
13451756-C-CTCCACTCCACTCCATTCCAT 11296080-C-CTCCACTCCACTCCATTCCAT *
13458401-CATTCCATTCCATTCCCTTCCATTCCATTCCACTCGGAATG-C 11302725-CATTCCATTCCATTCCCTTCCATTCCATTCCACTCGGAATG-C *
13463840-T-A 11308164-T-A *
13463953-C-CACG 11308277-C-CACG *
13465088-A-C 11309412-A-C *
13469116-T-C 11313440-T-C *
13470015-G-A 11314339-G-A *
13470583-CG-C 11314907-CG-C *
13474454-C-T 11318778-C-T *
11321234-T- *
13478662-C-G 11322986-C-G *
13479097-T-G 11323421-T-G *
13480898-C-T 11325222-C-T *
13480902-A-C 11325226-A-C *
13483272-A-T 11327596-A-T *
13483346-T-C 11327670-T-C *
13486194-ACATCACCTGGGTGATCAGTGCAGAGATATGTCACAATGCCCCTGTAGGTAGAGCATAGAGAACAGTTG-A 11330518-ACATCACCTGGGTGATCAGTGCAGAGATATGTCACAATGCCCCTGTAGGTAGAGCATAGAGAACAGTTG-A *
13487307-C-A 11331631-C-A *
13487330-A-G 11331654-A-G *
13487376-G-A 11331700-G-A *
13488389-C-T 11332713-C-T *
11333031-CGT- *
13488711-ACG-A 11333035-ACG-A *
11333037-GCC- *
13608647-CA-C,CAAA 11452971-CA-C,CAAA 27×A*
13611661-C-T 11455985-C-T *
13616427-TAAA-T,TAA 11460751-TAAA-T,TAA 28×A*
13623213-AT-A 11467537-AT-A 8×T*
13674163-AGAATGGAATG-A,AGAATG 11518487-AGAATGGAATG-A,AGAATG 9×GAATG*
13690743-G-C 11535067-G-C *
13692411-T-C 11536735-T-C *
13692415-GAAATATAATGGAAGGAAT-G 11536739-GAAATATAATGGAAGGAAT-G *
13692436-CATGGAATGGAATGGAATGGAATGCAATGGGA-C 11536760-CATGGAATGGAATGGAATGGAATGCAATGGGA-C 4×ATGGA*
13693264-G-A 11537588-G-A *
13693273-T-C 11537597-T-C *
13697435-A-G 11541759-A-G *
13706077-TG-T 11550401-TG-T *
13706080-AATGGTATGGCGTGGAATGGAATGG-A 11550404-AATGGTATGGCGTGGAATGGAATGG-A *
13714719-A-G 11559043-A-G *
13728937-T-C 11573261-T-C *
13728971-A-T 11573295-A-T *
12865372-T- *
15140881-T-G 13028968-T-G YY*
15336019-CA-C,CAA 13224137-CA-C,CAA 30×A*
15698757-GACACAC-G,GACAC 13586877-GACACAC-G,GACAC 24×AC*
15733879-CA-C,CAAAAA 13621999-CA-C,CAAAAA 25×A*
15866268-C-CAAAAAAA,CAAAAAAA 13754388-C-CAAAAAAA,CAAAAAAA 43×A*
15963518-G-GC 13851638-G-GC *
16242632-T-TTCTATCTA,TTCTATCTA 14130752-T-TTCTATCTA,TTCTATCTA 10×TCTA*
16447158-A-AAC,AACAC 14335278-A-AAC,AACAC 22×AC*
16475324-CG-C,C 14363444-CG-C,C 11×G*
16641872-C-CATAT,CATATAT 14529992-C-CATAT,CATATAT 12×AT*
16692119-A-C 14580239-A-C YY*
14667399-AC- *
16881532-ATT-A 14769652-ATT-A 10×T*
17006242-A-C 14894362-A-C YY*
17006243-G-T 14894363-G-T YY*
17006260-T-TA 14894380-T-TA *
17030757-AT-A,ATTT 14918877-AT-A,ATTT 24×T*
17074637-GT-G,GTT 14962757-GT-G,GTT 34×T*
17143891-A-ATTTTTT 15032011-A-ATTTTTT 35×T*
17323819-G-A 15211939-G-A YY*
17383464-A-C 15271584-A-C YY*
17474947-T-C 15363067-T-C YY*
17569226-GAA-G,GAAA 15457346-GAA-G,GAAA 25×A*
17616966-C-CAA,CAA 15505086-C-CAA,CAA 35×A*
17641957-CTTTT-C,CTTTTT 15530077-CTTTT-C,CTTTTT 25×T*
17669700-C-CATATATATATATATATATAT 15557820-C-CATATATATATATATATATAT 15×AT*
17731014-CA-C,CAAAA 15619134-CA-C,CAAAA 35×A*
17920941-C-CAAAA 15809061-C-CAAAA 45×A*
18760242-TTC-T,TTCTC 16648362-TTC-T,TTCTC 27×TC*
18867339-CTT-C,CTTTTT 16755459-CTT-C,CTTTTT 24×T*
19126436-C-CAAAAAA,CAAAAAAAAAA 17014556-C-CAAAAAA,CAAAAAAAAAA 25×A*
19202928-C-CA,CAAAA 17091048-C-CA,CAAAA 25×A*
19206797-G-GAAAAAAAAAAAAAAAAAAAAAAA 17094917-G-GAAAAAAAAAAAAAAAAAAAAAAA *
19293770-CA-C,CAA 17181890-CA-C,CAA 29×A*
19372284-T-TGATA,TGATAGATA 17260404-T-TGATA,TGATAGATA 11×GATA*
19437097-GGCAGGAAA-G 17325217-GGCAGGAAA-G *
19753693-CTTT-C,CTT 17641813-CTTT-C,CTT P5_Prx 25×T*
20501474-G-A 18339588-G-A P5_Dst *
21318477-CA-C,CAA 19156591-CA-C,CAA 19×A*
21409460-CA-C,C 19247574-CA-C,C 30×A*
21411718-C-CAAA 19249832-C-CAAA 31×A*
19340898-T- *
21569957-T-TAAAAAAA 19408071-T-TAAAAAAA *
21569958-T-A,TAAAAAAAA 19408072-T-A,TAAAAAAAA 46×A*
22218980-T-G 20057094-T-G DYZ19 *
22218992-C-G 20057106-C-G DYZ19 *
22218994-C-T 20057108-C-T DYZ19 *
22220542-C-A 20058656-C-A DYZ19 *
22220559-T-C 20058673-T-C DYZ19 *
22220572-G-A 20058686-G-A DYZ19 *
22224763-T-G 20062877-T-G DYZ19 *
22230565-C-T 20068679-C-T DYZ19 *
22230570-A-C 20068684-A-C DYZ19 *
22252010-CAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGTTCTCTTCAGGAATGAAGCTGCAGACCTTAGCGGTGAGCGTTACAGCACTTAAAGGTTTTATGTCCAGAGTTGTTCCATCAGATGTGTCT-C 20090124-CAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGTTCTCTTCAGGAATGAAGCTGCAGACCTTAGCGGTGAGCGTTACAGCACTTAAAGGTTTTATGTCCAGAGTTGTTCCATCAGATGTGTCT-C DYZ19 *
22253231-GGTGTTATGTCCAGAGTTTATTCCTTCAGATGTGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGCTCACTTCAAAATGAAGCTGCAGACCTTAGTAGTGAGTGTTACAGCACCTAAAT-G 20091345-GGTGTTATGTCCAGAGTTTATTCCTTCAGATGTGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGCTCACTTCAAAATGAAGCTGCAGACCTTAGTAGTGAGTGTTACAGCACCTAAAT-G DYZ19 *
22254711-TTA-T 20092825-TTA-T DYZ19 *
22254715-T-TAG 20092829-T-TAG DYZ19 *
22269433-C-T 20107547-C-T DYZ19 *
22269442-T-G 20107556-T-G DYZ19 *
22270476-T-C 20108590-T-C DYZ19 *
22270489-C-G 20108603-C-G DYZ19 *
22294480-GTCCAGAGTTTGTTCCATCAGATTTGCATAGAGTTTCTTCCCCATGGCAGGTTCACGGTCTCGCTCACTTCAAGAATGAAGCTGCAGATCATTACGGTGAGTGTTACAGCACTTAAAGGTGTTATA-G 20132594-GTCCAGAGTTTGTTCCATCAGATTTGCATAGAGTTTCTTCCCCATGGCAGGTTCACGGTCTCGCTCACTTCAAGAATGAAGCTGCAGATCATTACGGTGAGTGTTACAGCACTTAAAGGTGTTATA-G DYZ19 *
22303050-T-C 20141164-T-C DYZ19 *
22303069-G-A 20141183-G-A DYZ19 *
22318874-GGTTCATGGTCTTGCTCACTTTAAGAATGATGCTGCAGACCTTAGTGGTGAGGGTTACAGCACTTAAAGATGTTATGTCCACAGTTTTTTCCTTCAGATGTGTCTAGAGTTTCTTCCTTCTGGCAT-G 20156988-GGTTCATGGTCTTGCTCACTTTAAGAATGATGCTGCAGACCTTAGTGGTGAGGGTTACAGCACTTAAAGATGTTATGTCCACAGTTTTTTCCTTCAGATGTGTCTAGAGTTTCTTCCTTCTGGCAT-G DYZ19 *
22424842-T-G 20262956-T-G DYZ19 *
22424884-T-C 20262998-T-C DYZ19 *
22433723-T-C 20271837-T-C DYZ19 *
22443100-G-A 20281214-G-A DYZ19 *
22443110-T-C 20281224-T-C DYZ19 *
22447741-T-C 20285855-T-C DYZ19 *
22466718-C-A 20304832-C-A DYZ19 *
22466720-T-G 20304834-T-G DYZ19 *
22466725-G-A 20304839-G-A BY221765 DYZ19 *
22466740-A-T 20304854-A-T DYZ19 *
22466852-G-T 20304966-G-T DYZ19 *
22474657-A-G 20312771-A-G BY223185 DYZ19 *
22474680-G-T 20312794-G-T DYZ19 *
22487847-C-T 20325961-C-T DYZ19 *
22511081-G-T 20349195-G-T DYZ19 *
22540546-A-G 20378660-A-G Y*
22703595-C-CAAAAA,CAAAAA 20541709-C-CAAAAA,CAAAAA 30×A*
22723402-A-G 20561516-A-G YY*
22802868-A-ATTTTTTTTTTTTTTTTTTTTTTTTTTTTT,ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20640982-A-ATTTTTTTTTTTTTTTTTTTTTTTTTTTTT,ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32×T*
21276071-G- *
23802082-CA-C,CAAAAAA 21640196-CA-C,CAAAAAA 24×A*
23843594-T-TTATC,TTATCTATC 21681708-T-TTATC,TTATCTATC 10×TATC*
24119376-G-GA 21973229-G-GA P3_b1 9×A*
25461458-T-TGG 23315311-T-TGG P2_r2 *
25963867-C-CTTT,CTTT 23817720-C-CTTT,CTTT P1_Y1 34×T*
26416299-G-C,C 24270152-G-C,C P1_Y1 20×A*
26500263-A-T 24354116-A-T P1_Y1 *
26500265-A-T 24354118-A-T P1_Y1 *
26538868-TTATATATA-T 24392721-TTATATATA-T P1_g2 16×TA*
26834651-GAAAGAA-G 24688504-GAAAGAA-G P1_g2 *
27127602-A-C,C 24981455-A-C,C P1_g3 14×TTTC*
27162020-TAA-T 25015873-TAA-T P1_g3 18×A*
27232111-TTTTC-T,TTTTCTTTC 25085964-TTTTC-T,TTTTCTTTC P1_g3 18×TTTC*
27546138-TTTC-T 25399991-TTTC-T P1_Y2 *
27546144-T-G 25399997-T-G P1_Y2 *
25791690-A- P1_Y2 *
27964850-G-A 25818703-G-A P1_Y2 *
27991206-CA-C 25845059-CA-C P1_Y2 10×A*
28076184-AT-A 25930037-AT-A P1_Y2 12×T*
28553992-C-CA,CAA 26407845-C-CA,CAA 28×A*
28585183-C-T 26439036-C-T *
28700764-T-TAC,TATAC 26554617-T-TAC,TATAC 13×AC*
28747705-A-AT,ATTTTTT 26601558-A-AT,ATTTTTT 27×T*
28796058-G-C 26649911-G-C *
28803012-G-T 26656865-G-T *
28803110-A-G,T 26656963-A-G,T *
28803316-C-T 26657169-C-T *
28803335-T-A 26657188-T-A *
28803343-A-T 26657196-A-T *
28803629-A-G 26657482-A-G *
28804058-G-A 26657911-G-A *
28804118-G-T 26657971-G-T BY151726 *
28804154-G-A 26658007-G-A FT294372 *
28804168-G-A 26658021-G-A *
28805251-ATGG-A 26659104-ATGG-A *
56678050-C-T *
56678169-G-T *
56685705-G-A *
56685986-C-T *
56707494-G-T *
56757947-T-A *
56821793-T-C *
56824207-C-T *
56825056-G-T *
56826095-T-A *
56831049-T-TCATGTAACTCTTGTCTAGGCTCTGCTTACAGGGGGTATTTTGACATATC *
56832913-C- *
56832916-C- *
56832918-C- *
56834123-A-ATTCCACTCCG *
56834438-CA-C *
56834440-TTCCATTCCCTTCCATTCCATTCCCTTCCATTACATTCCATTCGATTGCATTCCA-T *
56845901-A-G *
56851326-G-C *
56863340-G-C *
56876124-C-CAAAAAA,CAAAAAAAAAAAAAA 50×A*
56878463-C-T *
56884917-C-G *

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.