Hulan
FGC: G19LI, FTDNA: 195834MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC G19LI | FTDNA 195834 |
---|---|---|---|---|---|---|---|---|---|
4726349-G-A | 4858308-G-A | FGC15720 | + | ||||||
9070056-C-T | 9232447-C-T | FGC15728 | Y | + | |||||
15939043-A-T | 13827163-A-T | FGC15734 | Y | Y | + | + | |||
21298986-C-A | 19137100-C-A | FGC15743 | Y | Y | + | + | |||
7681235-GT-G | 7813194-GT-G | + | + | ||||||
14609822-AT-A | ** | ||||||||
8482010-C-A | 8613969-C-A | F147 | ** | ||||||
22459741-G-T | 20297855-G-T | DYZ19 | ** | ** | |||||
21556919-C-CTTTTTTTTTTTTTT | 19395033-C-CTTTTTTTTTTTTTT | 23×T | ** | ||||||
58831111-TACACTCCA-T | 56759751-ATGGAGTGT-A | ** | |||||||
28794498-A-G | 26648351-A-G | *** | |||||||
28794500-C-A | 26648353-C-A | *** | |||||||
28794510-G-C | 26648363-G-C | *** | |||||||
28794514-T-A | 26648367-T-A | *** | |||||||
13740616-A-T | 11584940-A-T | *** | |||||||
22503403-C-G | 20341517-C-G | DYZ19 | *** | ||||||
22502716-G-T | 20340830-G-T | DYZ19 | *** | ||||||
22281898-T-C | 20120012-T-C | DYZ19 | *** | ||||||
15320640-A-G | 13208746-A-G | 4×GAAGAG | *** | ||||||
20013372-T-TA | 17901492-T-TA | P5_Prx | 8×A | *** | |||||
58912416-A-T | 56678455-T-A | *** | |||||||
22234658-T-C | 20072772-T-C | DYZ19 | *** | ||||||
58826833-C-T | 56764038-G-A | 9×CCATT | *** | ||||||
27918646-GT-G | 25772499-GT-G | P1_Y2 | 11×T | *** | |||||
13691776-A-T | 11536100-A-T | *** | |||||||
22496198-T-G | 20334312-T-G | DYZ19 | *** | ||||||
58843625-G-A | 56747246-C-T | *** | |||||||
16784423-G-A | 14672543-G-A | *** | |||||||
22496212-A-G | 20334326-A-G | DYZ19 | *** | ||||||
27902189-C-T | 25756042-C-T | P1_Y2 | *** | ||||||
27902197-C-T | 25756050-C-T | P1_Y2 | 34×T | *** | |||||
58843619-C-G | 56747252-G-C | *** | |||||||
58843621-T-A | 56747250-A-T | *** | |||||||
13203965-GA-G | 11048289-GA-G | *** | |||||||
58844026-A-ATC | 56746843-A-AAG | *** | |||||||
6089764-G-GTTTTT | 6221723-G-GTTTTT | 31×T | *** | ||||||
13203955-CATCATT-GACAATA | 11048279-CATCATT-GACAATA | *** | |||||||
15336019-C-CAAAAAAA | 13224137-C-CAAAAAAA | 30×A | *** | ||||||
22252645-TCTTCCTTTTGGC-CCTTAATTCTGGG | 20090759-TCTTCCTTTTGGC-CCTTAATTCTGGG | DYZ19 | *** | ||||||
22421783-GC-CT | 20259897-GC-CT | DYZ19 | *** | ||||||
23801733-C-CAAAAAAA | 21639847-C-CAAAAAAA | 31×A | *** | ||||||
58981976-TTTCCAC-T | 56835829-TTTCCAC-T | *** | |||||||
22341597-T-G | 20179711-T-G | DYZ19 | *** | ||||||
22341618-G-T | 20179732-G-T | DYZ19 | *** | ||||||
13440814-A-G | 11285138-A-G | *** | |||||||
13475702-C-T | 11320026-C-T | *** | |||||||
13114407-G-A | 10603893-G-A | *** | |||||||
22496162-T-A | 20334276-T-A | DYZ19 | *** | ||||||
58843764-A-C | 56747107-T-G | *** | |||||||
58852082-T-C | 56738789-A-G | *** | |||||||
58866483-C-T | 56724388-G-A | *** | |||||||
58916211-GCATTC-G | 56674630-AAATGG-A | 5×CATTC | *** | ||||||
22113187-C-CAAAAA | 19951301-C-CAAAAA | 23×A | *** | ||||||
28804551-CT-TC | 26658404-CT-TC | *** | |||||||
18333746-A-T | 16221866-A-T | P6_Prx | *** | ||||||
18333778-A-T | 16221898-A-T | P6_Prx | *** | ||||||
19656535-G-A | 17544655-G-A | P5_Prx | *** | ||||||
19656586-G-T | 17544706-G-T | P5_Prx | *** | ||||||
19937302-G-C | 17825422-G-C | P5_Prx | *** | ||||||
20531661-G-A | 18369775-G-A | P5_Dst | *** | ||||||
20531664-T-G | 18369778-T-G | P5_Dst | *** | ||||||
20531675-T-C | 18369789-T-C | P5_Dst | *** | ||||||
20531677-C-A | 18369791-C-A | P5_Dst | *** | ||||||
20531681-A-C | 18369795-A-C | P5_Dst | *** | ||||||
20531695-C-T | 18369809-C-T | P5_Dst | *** | ||||||
20531707-G-A | 18369821-G-A | P5_Dst | *** | ||||||
22341764-C-A | 20179878-C-A | DYZ19 | *** | ||||||
22342588-T-G | 20180702-T-G | DYZ19 | *** | ||||||
58913180-C-G | 56677691-G-C | *** | |||||||
58916245-A-G | 56674626-T-C | *** | |||||||
19937284-G-GCCCC | 17825404-G-GCCCC | P5_Prx | 13×C | *** | |||||
22263752-CAATACA-TACTTCC | 20101866-CAATACA-TACTTCC | DYZ19 | *** | ||||||
13203958-C-A | 11048282-C-A | *** | |||||||
13484480-A-C | 11328804-A-C | *** | |||||||
20540879-C-T | 18378993-C-T | P5_Dst | *** | ||||||
20540883-A-G | 18378997-A-G | P5_Dst | *** | ||||||
20540897-A-G | 18379011-A-G | P5_Dst | *** | ||||||
20540898-T-C | 18379012-T-C | P5_Dst | *** | ||||||
20540899-T-C | 18379013-T-C | P5_Dst | *** | ||||||
20540945-T-C | 18379059-T-C | P5_Dst | *** | ||||||
20540995-T-G | 18379109-T-G | P5_Dst | *** | ||||||
58866449-A-G | 56724422-T-C | *** | |||||||
58866458-C-A | 56724413-G-T | *** | |||||||
20540879-CTTAA-TTTAG | 18378993-CTTAA-TTTAG | P5_Dst | *** | ||||||
20540960-GG-AA | 18379074-GG-AA | P5_Dst | *** | ||||||
20541008-CT-TG | 18379122-CT-TG | P5_Dst | *** | ||||||
58820555-G-C | 56770316-C-G | *** | |||||||
13111839-G-A | 10601325-G-A | *** | |||||||
22502030-A-T | 20340144-A-T | DYZ19 | *** | ||||||
27417788-A-C | 25271641-A-C | P1_g3 | *** | ||||||
22309281-GCTCCA-TCTGCG | 20147395-GCTCCA-TCTGCG | DYZ19 | *** | ||||||
22309319-CT-GA | 20147433-CT-GA | DYZ19 | *** | ||||||
27617980-C-CAAAAAAA | 25471833-C-CAAAAAAA | P1_Y2 | 29×A | *** | |||||
13129663-TC-CTT | 10619149-TC-CTT | *** | |||||||
13203970-CCACCCCGCCTC-TAAT | 11048294-CCACCCCGCCTC-TAAT | *** | |||||||
22435814-C-G | 20273928-C-G | DYZ19 | *** | ||||||
58872476-C-T | 56718395-G-A | *** | |||||||
13253393-TCGG-CCAGTTTT | 11097717-TCGG-CCAGTTTT | *** | |||||||
22273689-T-A | 20111803-T-A | DYZ19 | *** | ||||||
22341863-A-C | 20179977-A-C | DYZ19 | *** | ||||||
26499952-A-T | 24353805-A-T | P1_Y1 | 20×T | *** | |||||
58900034-A-G | 56690837-T-C | *** | |||||||
58913266-A-T | 56677605-T-A | *** | |||||||
22491770-C-T | 20329884-C-T | DYZ19 | *** | ||||||
58847479-GCATTCCATTC-G | 56743371-CGAATGGAATG-C | 4×CATTC | *** | ||||||
58913247-CG-C | 56677622-TC-T | *** | |||||||
22257290-T-G | 20095404-T-G | DYZ19 | *** | ||||||
22344726-G-T | 20182840-G-T | DYZ19 | *** | ||||||
22495918-G-A | 20334032-G-A | DYZ19 | *** | ||||||
22272937-TA-T | 20111051-TA-T | DYZ19 | *** | ||||||
59007963-A-ACAAACAAAC | 56861816-A-ACAAACAAAC | *** | |||||||
22341694-TCAC-GCAG | 20179808-TCAC-GCAG | DYZ19 | *** | ||||||
58850718-ACCTTGCATTACACTC-A | 56740133-GAAGGGAGTGTAATGC-G | *** | |||||||
22420903-T-A | 20259017-T-A | DYZ19 | *** | ||||||
13470244-GT-G | 11314568-GT-G | *** | |||||||
22420853-TAGT-GTGA | 20258967-TAGT-GTGA | DYZ19 | *** | ||||||
22420867-TGATG-AGATA | 20258981-TGATG-AGATA | DYZ19 | *** | ||||||
22420877-AAAA-GTAG | 20258991-AAAA-GTAG | DYZ19 | *** | ||||||
28369379-CA-C | 26223232-CA-C | P1_gr2 | 18×A | *** | |||||
14491215-A-AAACAT | *** | ||||||||
22268290-CTTAGTGG-ATTGGTGT | 20106404-CTTAGTGG-ATTGGTGT | DYZ19 | *** | ||||||
19517642-C-A | 17405762-C-A | FGC72903 | FGC72927 | *** | |||||
22252925-C-G | 20091039-C-G | DYZ19 | *** | ||||||
22341648-G-T | 20179762-G-T | DYZ19 | *** | ||||||
22341680-C-T | 20179794-C-T | DYZ19 | *** | ||||||
58854277-C-T | 56736594-G-A | *** | |||||||
58874506-A-G | 56716365-T-C | *** | |||||||
22341656-GAAG-CAAC | 20179770-GAAG-CAAC | DYZ19 | *** | ||||||
58874465-AG-TAT | 56716405-CT-ATA | *** | |||||||
22268172-G-T | 20106286-G-T | DYZ19 | *** | ||||||
58820585-G-C | 56770286-C-G | *** | |||||||
58832602-C-T | 56758269-G-A | *** | |||||||
58832604-A-T | 56758267-T-A | *** | |||||||
58876441-C-A | 56714430-G-T | *** | |||||||
58907250-T-G | 56683621-A-C | *** | |||||||
27398510-C-CAAAAAAAAA | 25252363-C-CAAAAAAAAA | P1_g3 | 23×A | *** | |||||
58823275-CCCATTCCATCTCATTCCATTCCATT-C | 56767561-AATGGAATGGAATGGAATGGAATGAG-A | *** | |||||||
22500258-A-T | 20338372-A-T | DYZ19 | *** | ||||||
58840403-A-T | 56750468-T-A | *** | |||||||
58913273-T-C | 56677598-A-G | *** | |||||||
22480697-A-T | 20318811-A-T | DYZ19 | *** | ||||||
22364862-A-G | 20202976-A-G | DYZ19 | *** | ||||||
22496000-T-G | 20334114-T-G | DYZ19 | *** | ||||||
22273691-C-T | 20111805-C-T | DYZ19 | *** | ||||||
22365618-GC-TG | 20203732-GC-TG | DYZ19 | *** | ||||||
22273690-A-G | 20111804-A-G | DYZ19 | *** | ||||||
22273685-C-A | 20111799-C-A | DYZ19 | *** | ||||||
9303941-G-T | 9466332-G-T | *** | |||||||
20540905-G-T | 18379019-G-T | P5_Dst | *** | ||||||
9735605-G-GTTTTT | 9897996-G-GTTTTT | IR3_Prx | 30×T | *** | |||||
22341824-A-T | 20179938-A-T | DYZ19 | *** | ||||||
13726432-G-A | 11570756-G-A | *** | |||||||
58847060-A-C | 56743811-T-G | *** | |||||||
58847081-G-A | 56743790-C-T | *** | |||||||
58852477-T-C | 56738394-A-G | *** | |||||||
58859162-G-C | 56731709-C-G | *** | |||||||
58859164-A-T | 56731707-T-A | *** | |||||||
58909144-C-G | 56681727-G-C | *** | |||||||
22365765-ACA-CCT | 20203879-ACA-CCT | DYZ19 | *** | ||||||
58847090-A-G | 56743781-T-C | *** | |||||||
58843619-CGTTTCG-GGAGTCA | 56747246-CGAAACG-TGACTCC | *** | |||||||
58852369-A-G | 56738502-T-C | *** | |||||||
13483929-T-G | 11328253-T-G | *** | |||||||
58870597-ACCCA-GATCT | 56720270-TGGGT-AGATC | *** | |||||||
24552097-C-T | 22405950-C-T | P3_t2 | *** | ||||||
22330058-T-G | 20168172-T-G | DYZ19 | *** | ||||||
8964953-N-G | 9096912-N-G | *** | |||||||
17081250-T-A | 14969370-T-A | *** | |||||||
13255004-C-T | 11099328-C-T | *** | |||||||
24552048-T-C | 22405901-T-C | FGC80534 | P3_t2 | *** | |||||
24207919-C-G | 22061772-C-G | P3_b1 | *** | ||||||
26991234-A-G | 24845087-A-G | FGC73598 | P1_r4 | *** | |||||
22365762-T-G | 20203876-T-G | DYZ19 | *** | ||||||
22344617-G-C | 20182731-G-C | DYZ19 | *** | ||||||
22353387-A-C | 20191501-A-C | DYZ19 | *** | ||||||
22341847-T-G | 20179961-T-G | DYZ19 | *** | ||||||
22332673-C-A | 20170787-C-A | DYZ19 | *** | ||||||
3634504-A-T | 3766463-A-T | *** | |||||||
5009286-T-C | 5141245-T-C | *** | |||||||
5477410-G-T | 5609369-G-T | *** | |||||||
6201134-G-T | 6333093-G-T | IR3_Dst | *** | ||||||
6209784-A-T | 6341743-A-T | IR3_Dst | *** | ||||||
6671335-T-A | 6803294-T-A | *** | |||||||
9191109-A-T | 9353500-A-T | *** | |||||||
9342737-C-G | 9505128-C-G | *** | |||||||
9342739-G-T | 9505130-G-T | *** | |||||||
9342986-G-T | 9505377-G-T | *** | |||||||
9345055-C-G | 9507446-C-G | *** | |||||||
9345497-G-C | 9507888-G-C | *** | |||||||
9345502-A-T | 9507893-A-T | *** | |||||||
9363322-C-A | 9525713-C-A | *** | |||||||
9585388-A-T | 9747779-A-T | IR3_Prx | *** | ||||||
9585399-G-A | 9747790-G-A | IR3_Prx | *** | ||||||
10084031-T-A | 10246422-T-A | *** | |||||||
10084304-G-A | 10246695-G-A | *** | |||||||
10094962-T-C | 10257353-T-C | *** | |||||||
10094963-G-T | 10257354-G-T | *** | |||||||
10094969-G-C | 10257360-G-C | *** | |||||||
10094970-G-A | 10257361-G-A | *** | |||||||
10094985-T-C | 10257376-T-C | *** | |||||||
10095023-A-T | 10257414-A-T | *** | |||||||
10095035-G-T | 10257426-G-T | *** | |||||||
13109505-T-A | 10598991-T-A | *** | |||||||
13109515-T-C | 10599001-T-C | *** | |||||||
13109526-C-A | 10599012-C-A | *** | |||||||
13110965-T-A | 10600451-T-A | *** | |||||||
13114355-G-T | 10603841-G-T | *** | |||||||
13114393-C-G | 10603879-C-G | *** | |||||||
13114401-G-C | 10603887-G-C | *** | |||||||
13463452-G-T | 11307776-G-T | *** | |||||||
13467385-T-A | 11311709-T-A | *** | |||||||
13475568-G-T | 11319892-G-T | *** | |||||||
13724565-T-A | 11568889-T-A | *** | |||||||
13724570-A-G | 11568894-A-G | *** | |||||||
13724572-G-T | 11568896-G-T | *** | |||||||
13724573-G-T | 11568897-G-T | *** | |||||||
13724578-C-A | 11568902-C-A | *** | |||||||
13724587-G-C | 11568911-G-C | *** | |||||||
13726438-A-T | 11570762-A-T | *** | |||||||
13726487-C-A | 11570811-C-A | *** | |||||||
13726494-G-A | 11570818-G-A | *** | |||||||
13726504-A-G | 11570828-A-G | *** | |||||||
13726549-C-G | 11570873-C-G | *** | |||||||
13728263-T-C | 11572587-T-C | *** | |||||||
13734795-G-T | 11579119-G-T | *** | |||||||
15675458-C-T | 13563578-C-T | *** | |||||||
17323693-A-G | 15211813-A-G | *** | |||||||
17835066-A-G | 15723186-A-G | *** | |||||||
18443675-T-A | 16331795-T-A | P6_Dst | *** | ||||||
19176144-G-T | 17064264-G-T | *** | |||||||
19386620-A-T | 17274740-A-T | *** | |||||||
19775683-C-A | 17663803-C-A | P5_Prx | *** | ||||||
19816800-A-T | 17704920-A-T | P5_Prx | *** | ||||||
19816804-C-T | 17704924-C-T | P5_Prx | *** | ||||||
19833480-G-A | 17721600-G-A | P5_Prx | *** | ||||||
19858668-C-T | 17746788-C-T | P5_Prx | *** | ||||||
19858669-A-T | 17746789-A-T | P5_Prx | *** | ||||||
19858700-A-T | 17746820-A-T | P5_Prx | *** | ||||||
19858704-C-A | 17746824-C-A | P5_Prx | *** | ||||||
20132282-C-A | 18020402-C-A | P5_Dst | *** | ||||||
20233154-A-T | 18071268-A-T | P5_Dst | *** | ||||||
20233155-A-T | 18071269-A-T | P5_Dst | *** | ||||||
20233158-T-A | 18071272-T-A | P5_Dst | *** | ||||||
20233162-T-A | 18071276-T-A | P5_Dst | *** | ||||||
20264244-A-T | 18102358-A-T | P5_Dst | *** | ||||||
20264245-C-T | 18102359-C-T | P5_Dst | *** | ||||||
20264246-C-T | 18102360-C-T | P5_Dst | *** | ||||||
20264270-A-T | 18102384-A-T | P5_Dst | *** | ||||||
20435194-G-A | 18273308-G-A | P5_Dst | *** | ||||||
20574118-T-C | 18412232-T-C | P5_Dst | *** | ||||||
20842571-A-G | 18680685-A-G | P4_Dst | *** | ||||||
20955090-A-T | 18793204-A-T | P4_Dst | *** | ||||||
22234708-C-G | 20072822-C-G | DYZ19 | *** | ||||||
22234710-C-T | 20072824-C-T | DYZ19 | *** | ||||||
22234713-T-G | 20072827-T-G | DYZ19 | *** | ||||||
22248764-G-T | 20086878-G-T | DYZ19 | *** | ||||||
22248840-C-T | 20086954-C-T | DYZ19 | *** | ||||||
22250250-C-A | 20088364-C-A | DYZ19 | *** | ||||||
22251516-T-A | 20089630-T-A | DYZ19 | *** | ||||||
22251587-C-A | 20089701-C-A | DYZ19 | *** | ||||||
22268259-T-A | 20106373-T-A | DYZ19 | *** | ||||||
22289506-G-A | 20127620-G-A | DYZ19 | *** | ||||||
22311552-C-T | 20149666-C-T | DYZ19 | *** | ||||||
22311593-C-G | 20149707-C-G | DYZ19 | *** | ||||||
22315215-C-T | 20153329-C-T | DYZ19 | *** | ||||||
22317729-A-G | 20155843-A-G | DYZ19 | *** | ||||||
22321096-T-A | 20159210-T-A | DYZ19 | *** | ||||||
22322612-G-T | 20160726-G-T | DYZ19 | *** | ||||||
22329671-G-A | 20167785-G-A | DYZ19 | *** | ||||||
22330060-G-A | 20168174-G-A | DYZ19 | *** | ||||||
22332674-A-T | 20170788-A-T | DYZ19 | *** | ||||||
22332676-T-G | 20170790-T-G | DYZ19 | *** | ||||||
22332677-T-G | 20170791-T-G | DYZ19 | *** | ||||||
22341639-C-A | 20179753-C-A | DYZ19 | *** | ||||||
22341643-G-C | 20179757-G-C | DYZ19 | *** | ||||||
22341659-G-C | 20179773-G-C | DYZ19 | *** | ||||||
22341815-T-C | 20179929-T-C | DYZ19 | *** | ||||||
22342624-A-T | 20180738-A-T | DYZ19 | *** | ||||||
22343136-T-C | 20181250-T-C | DYZ19 | *** | ||||||
22343137-T-G | 20181251-T-G | DYZ19 | *** | ||||||
22343913-T-A | 20182027-T-A | DYZ19 | *** | ||||||
22343914-T-C | 20182028-T-C | DYZ19 | *** | ||||||
22344117-G-T | 20182231-G-T | DYZ19 | *** | ||||||
22344592-A-C | 20182706-A-C | DYZ19 | *** | ||||||
22344670-G-A | 20182784-G-A | DYZ19 | *** | ||||||
22351196-T-A | 20189310-T-A | DYZ19 | *** | ||||||
22351197-T-G | 20189311-T-G | DYZ19 | *** | ||||||
22352875-A-G | 20190989-A-G | DYZ19 | *** | ||||||
22352878-T-A | 20190992-T-A | DYZ19 | *** | ||||||
22355111-G-T | 20193225-G-T | DYZ19 | *** | ||||||
22359779-A-T | 20197893-A-T | DYZ19 | *** | ||||||
22361084-C-T | 20199198-C-T | DYZ19 | *** | ||||||
22364462-G-C | 20202576-G-C | DYZ19 | *** | ||||||
22366432-G-T | 20204546-G-T | DYZ19 | *** | ||||||
22420922-A-G | 20259036-A-G | DYZ19 | *** | ||||||
22421028-T-A | 20259142-T-A | DYZ19 | *** | ||||||
22421067-C-G | 20259181-C-G | DYZ19 | *** | ||||||
22426317-T-A | 20264431-T-A | DYZ19 | *** | ||||||
22426328-A-C | 20264442-A-C | DYZ19 | *** | ||||||
22496017-G-A | 20334131-G-A | DYZ19 | *** | ||||||
22499545-C-A | 20337659-C-A | DYZ19 | *** | ||||||
22499933-A-C | 20338047-A-C | DYZ19 | *** | ||||||
22500180-A-T | 20338294-A-T | DYZ19 | *** | ||||||
22500514-A-T | 20338628-A-T | DYZ19 | *** | ||||||
22502526-T-A | 20340640-T-A | DYZ19 | *** | ||||||
22504826-T-A | 20342940-T-A | DYZ19 | *** | ||||||
24152855-A-T | 22006708-A-T | P3_b1 | *** | *** | |||||
24323497-G-T | 22177350-G-T | P3_t1 | *** | ||||||
24343465-T-G | 22197318-T-G | P3_t1 | *** | ||||||
24608186-G-A | 22462039-G-A | P3_t2 | *** | ||||||
24608194-T-G | 22462047-T-G | P3_t2 | *** | ||||||
25674240-C-A | 23528093-C-A | P1_b3 | *** | ||||||
25674249-C-G | 23528102-C-G | P1_b3 | *** | ||||||
25674253-A-T | 23528106-A-T | P1_b3 | *** | ||||||
25674268-T-G | 23528121-T-G | P1_b3 | *** | ||||||
25854864-C-A | 23708717-C-A | P1_Y1 | *** | ||||||
25854882-A-G | 23708735-A-G | P1_Y1 | *** | ||||||
25855068-C-T | 23708921-C-T | P1_Y1 | *** | ||||||
25866083-C-T | 23719936-C-T | P1_Y1 | *** | ||||||
26262207-G-T | 24116060-G-T | P1_Y1 | *** | ||||||
26276384-G-T | 24130237-G-T | P1_Y1 | *** | ||||||
26324913-C-A | 24178766-C-A | P1_Y1 | *** | ||||||
26469843-G-T | 24323696-G-T | P1_Y1 | *** | ||||||
26484989-C-T | 24338842-C-T | P1_Y1 | *** | ||||||
26563121-A-T | 24416974-A-T | P1_g2 | *** | ||||||
26563131-A-T | 24416984-A-T | P1_g2 | *** | ||||||
26563145-A-T | 24416998-A-T | P1_g2 | *** | ||||||
26563148-A-T | 24417001-A-T | P1_g2 | *** | ||||||
27195434-T-G | 25049287-T-G | P1_g3 | *** | ||||||
27398425-A-G | 25252278-A-G | P1_g3 | *** | ||||||
27626723-T-A | 25480576-T-A | P1_Y2 | *** | ||||||
27626724-G-A | 25480577-G-A | P1_Y2 | *** | ||||||
27626729-T-A | 25480582-T-A | P1_Y2 | *** | ||||||
27626757-C-T | 25480610-C-T | P1_Y2 | *** | ||||||
27626758-G-T | 25480611-G-T | P1_Y2 | *** | ||||||
27626760-G-A | 25480613-G-A | P1_Y2 | *** | ||||||
27626770-G-T | 25480623-G-T | P1_Y2 | *** | ||||||
27626771-G-T | 25480624-G-T | P1_Y2 | *** | ||||||
27873324-C-T | 25727177-C-T | P1_Y2 | 20×T | *** | |||||
27917247-A-T | 25771100-A-T | P1_Y2 | *** | ||||||
27917272-C-T | 25771125-C-T | P1_Y2 | *** | ||||||
27917273-A-T | 25771126-A-T | P1_Y2 | *** | ||||||
27917274-A-T | 25771127-A-T | P1_Y2 | *** | ||||||
27917275-A-T | 25771128-A-T | P1_Y2 | *** | ||||||
27917280-G-T | 25771133-G-T | P1_Y2 | *** | ||||||
27917281-G-T | 25771134-G-T | P1_Y2 | *** | ||||||
28112811-G-T | 25966664-G-T | P1_Y2 | *** | ||||||
28112819-G-A | 25966672-G-A | P1_Y2 | *** | ||||||
28489420-C-T | 26343273-C-T | *** | |||||||
58825356-G-T | 56765515-C-A | *** | |||||||
58826839-C-T | 56764032-G-A | *** | |||||||
58830838-C-T | 56760033-G-A | *** | |||||||
58832594-T-A | 56758277-A-T | *** | |||||||
58832603-C-T | 56758268-G-A | *** | |||||||
58832649-G-A | 56758222-C-T | *** | |||||||
58833789-T-A | 56757082-A-T | *** | |||||||
58838388-C-G | 56752483-G-C | *** | |||||||
58840476-A-C | 56750395-T-G | *** | |||||||
58843679-T-A | 56747192-A-T | *** | |||||||
58843741-T-G | 56747130-A-C | *** | |||||||
58844245-G-T | 56746626-C-A | *** | |||||||
58844246-A-C | 56746625-T-G | *** | |||||||
58844248-T-C | 56746623-A-G | *** | |||||||
58847042-G-A | 56743829-C-T | *** | |||||||
58847052-T-A | 56743819-A-T | *** | |||||||
58847369-T-G | 56743502-A-C | *** | |||||||
58848404-C-T | 56742467-G-A | *** | |||||||
58848412-T-G | 56742459-A-C | *** | |||||||
58854233-T-C | 56736638-A-G | *** | |||||||
58866420-T-A | 56724451-A-T | *** | |||||||
58876424-C-A | 56714447-G-T | *** | |||||||
58884715-C-T | 56706156-G-A | *** | |||||||
58884736-T-A | 56706135-A-T | *** | |||||||
58889896-C-T | 56700975-G-A | *** | |||||||
58909165-G-C | 56681706-C-G | *** | |||||||
58913108-C-A | 56677763-G-T | *** | |||||||
58913221-T-G | 56677650-A-C | *** | |||||||
16344404-C-CTTCTTT | 14232524-C-CTTCTTT | *** | |||||||
10016645-CCGCGTTGACACTC-GGACGCTGATGCTG | 10179036-CCGCGTTGACACTC-GGACGCTGATGCTG | *** | |||||||
19377288-AAGGG-A | 17265408-AAGGG-A | 5×AGGG | *** | ||||||
20842560-AAG-GAA | 18680674-AAG-GAA | P4_Dst | *** | ||||||
28457748-CA-C | 26311601-CA-C | 21×A | *** | ||||||
22311598-TA-GT | 20149712-TA-GT | DYZ19 | *** | ||||||
5147441-CAAAAAAAAAA-C | 5279400-CAAAAAAAAAA-C | 30×A | *** | ||||||
5937238-CTCTC-A | 6069197-CTCTC-A | *** | |||||||
6201138-GC-G | 6333097-GC-G | IR3_Dst | *** | ||||||
6201142-TCAGAAGGCAAGA-T | 6333101-TCAGAAGGCAAGA-T | IR3_Dst | *** | ||||||
8016938-C-CTTTTTTT | 8148897-C-CTTTTTTT | 25×T | *** | ||||||
8575956-A-ATTTTTTT | 8707915-A-ATTTTTTT | 28×T | *** | ||||||
9218518-GTGTTTGTG-TTGAGTT | 9380909-GTGTTTGTG-TTGAGTT | *** | |||||||
9700780-C-CAAAAA | 9863171-C-CAAAAA | IR3_Prx | 23×A | *** | |||||
13110938-AAAGTT-GGAGAG | 10600424-AAAGTT-GGAGAG | *** | |||||||
13110958-AA-TG | 10600444-AA-TG | *** | |||||||
13140070-ACTCGAGTGCGTGTGATTCCATTAAAT-A | 10629556-ACTCGAGTGCGTGTGATTCCATTAAAT-A | *** | |||||||
13253190-CG-TA | 11097514-CG-TA | *** | |||||||
13267597-C-CAAAAAAA | 11111921-C-CAAAAAAA | 11×A | *** | ||||||
13414797-A-ATCTTTTT | 11259121-A-ATCTTTTT | 20×T | *** | ||||||
13484477-AGCA-GGCC | 11328801-AGCA-GGCC | *** | |||||||
13484502-GGGT-CAGC | 11328826-GGGT-CAGC | *** | |||||||
13740589-CATC-AATA | 11584913-CATC-AATA | *** | |||||||
13740826-GGG-TGC | 11585150-GGG-TGC | *** | |||||||
13898754-G-GTTTATTTATTTTTTT | 11778048-G-GTTTATTTATTTTTTT | 26×T | *** | ||||||
14738413-CTTTTT-C | 12626481-CTTTTT-C | 17×T | *** | ||||||
15013031-GC-AA | 12901119-GC-AA | *** | |||||||
15882074-C-CACAAAAA | 13770194-C-CACAAAAA | 25×A | *** | ||||||
16344416-C-CTTCTTA | 14232536-C-CTTCTTA | *** | |||||||
16785733-AAAA-CAAC | 14673853-AAAA-CAAC | *** | |||||||
17218300-C-CTTTTTTTTT | 15106420-C-CTTTTTTTTT | 16×T | *** | ||||||
18255888-T-TAAAAA | 16144008-T-TAAAAA | 22×A | *** | ||||||
20540897-ATTTAT-GCCTATA | 18379011-ATTTAT-GCCTATA | P5_Dst | *** | ||||||
20540905-GGGG-TGAA | 18379019-GGGG-TGAA | P5_Dst | *** | ||||||
20540915-A-AAGG | 18379029-A-AAGG | P5_Dst | *** | ||||||
20574131-CCA-GTGG | 18412245-CCA-GTGG | P5_Dst | *** | ||||||
20574139-CCTGGGCCTAC-GCTGAGCTCAT | 18412253-CCTGGGCCTAC-GCTGAGCTCAT | P5_Dst | *** | ||||||
20574157-TC-CT | 18412271-TC-CT | P5_Dst | *** | ||||||
21306590-C-CAAAAAAAA | 19144704-C-CAAAAAAAA | 27×A | *** | ||||||
21853677-C-CAAAAAAAA | 19691791-C-CAAAAAAAA | 43×A | *** | ||||||
22023684-G-GTTTTTTT | 19861798-G-GTTTTTTT | 17×T | *** | ||||||
22234332-CT-AG | 20072446-CT-AG | DYZ19 | *** | ||||||
22276466-ATAA-TTAC | 20114580-ATAA-TTAC | DYZ19 | *** | ||||||
22292751-AG-GA | 20130865-AG-GA | DYZ19 | *** | ||||||
22297347-CGTTGTC-AGGTGTT | 20135461-CGTTGTC-AGGTGTT | DYZ19 | *** | ||||||
22332674-ACTT-TCGG | 20170788-ACTT-TCGG | DYZ19 | *** | ||||||
22337744-TTGA-CTGG | 20175858-TTGA-CTGG | DYZ19 | *** | ||||||
22351196-TT-AG | 20189310-TT-AG | DYZ19 | *** | ||||||
22361071-CTAAAC-AGAGT | 20199185-CTAAAC-AGAGT | DYZ19 | *** | ||||||
22364840-CTTACTGT-TTTTGTGG | 20202954-CTTACTGT-TTTTGTGG | DYZ19 | *** | ||||||
22367119-AT-GA | 20205233-AT-GA | DYZ19 | *** | ||||||
22369675-G-GA | 20207789-G-GA | DYZ19 | *** | ||||||
22496008-CG-GA | 20334122-CG-GA | DYZ19 | *** | ||||||
22496026-CT-AC | 20334140-CT-AC | DYZ19 | *** | ||||||
22498796-TT-GA | 20336910-TT-GA | DYZ19 | *** | ||||||
24115209-CAA-AAT | 21969062-CAA-AAT | P3_b1 | *** | ||||||
24508205-C-CTTTTTT | 22362058-C-CTTTTTT | 22×T | *** | ||||||
24686428-C-CTTT | 22540281-C-CTTT | P3_b2 | 23×T | *** | |||||
25676090-AG-A | 23529943-AG-A | P1_b3 | *** | ||||||
26386480-C-CAAAAAAAAAAAAAAA | 24240333-C-CAAAAAAAAAAAAAAA | P1_Y1 | 20×A | *** | |||||
27902194-AGTC-TGTT | 25756047-AGTC-TGTT | P1_Y2 | *** | ||||||
28336668-C-CAAAA | 26190521-C-CAAAA | P1_b4 | 31×A | *** | |||||
58823335-T-TC | 56767534-T-TG | *** | |||||||
58830963-TG-AT | 56759907-CA-AT | *** | |||||||
58840405-CA-TAG | 56750465-TG-CTA | *** | |||||||
58843671-TTTCCGTTTCA-AGTCAATGATT | 56747190-TGAAACGGAAA-AATCATTGACT | *** | |||||||
58847203-TCCTTTCC-GCCATTCG | 56743661-GGAAAGGA-CGAATGGC | *** | |||||||
58847223-TCCATTC-GCCAAAT | 56743642-GAATGGA-ATTTGGC | *** | |||||||
58863512-TCT-GCC | 56727357-AGA-GGC | *** | |||||||
58890513-TTCCATTTT-GTCCGTTTC | 56700350-AAAATGGAA-GAAACGGAC | *** | |||||||
58907251-ATCA-TTCC | 56683617-TGAT-GGAA | *** | |||||||
59007959-C-CAAAAAA | 56861812-C-CAAAAAA | 26×A | *** | ||||||
21553403-C-CTTTTTTTTTTTT | 19391517-C-CTTTTTTTTTTTT | 31×T | *** | ||||||
26124427-C-CAAAAAAAAAAAAAAA | 23978280-C-CAAAAAAAAAAAAAAA | P1_Y1 | 31×A | *** | |||||
22286816-A-T | 20124930-A-T | DYZ19 | *** | ||||||
25206080-A-C | 23059933-A-C | g1 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.