HIDE SNP NAMES

The Big Tree: R-A5001

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > Z295/S1217 > S25783 > CTS4065 > 15548847-GACAC-G > A5001

A5001 Y13437
26175667-A-G
FGC69225
FGC15712? Y8715?
FGC15713? Y7765?
Y7766? FGC15711?
Y17687 BY3275
Y17459
Y38287
Y17460
Y17461
Y17463
Y17685
Y17465
Y17466
Y17677
Y17678
Y17679
16757733-GTGA-G
Y17467
Y17682
Y17683
18726728-C-CT
19396702-GC-G
Y17688
Y17689
22298063-T-A
BY43906
22462176-G-A
FGC69210
Y17470
Y17472
Y17462
BY43052
Y17458
Y17464
Y17686
Y17680
Y17684
Y17468
Y17471
Y46504
Y48119
Y49584
Y56103
Y57057
Y59451
Gummer
233908
Gummer
260546 260546
Gummer
463867 463867
Buck
292951
Cartier
N115807
Foushee
301541
Kidley
276157 276157
Vivies
90025
Horne
243919

Overlay STR Data for an STR:


Porter
N28007
Oakes
H2290
Williamson
196041
A red background is used for men whose data has not yet been fully analyzed. His position on the tree is not yet final, and will in general be downstream of the current position. He may not be positive for all the SNPs/INDELs in the block he descends from.

Men whose NGS data have been fully analyzed are indicated with a grey background color.

Those men with a grey background and a pink bar to their left have been finalized, but haven't gone through as much scrutinity as earlier kits have. In particular, no search has been made for recurrent SNPs or other unusual mutations. For the vast majority of kits, this has no effect at all, but I will review them as necessary in the future.

A242
FGC18232?
A red SNP name with a '?' indicates that the SNP's status for the block is uncertain, but assumed to be negative. The same SNP probably occurs in a parallel block. It will be necessary to check BAM files or perhaps Sanger sequence some men to prove the result.

CTS4296
22233413-G-A
Mutations written with a red background fall within a region of the Y chromosome, such as the palindromic region, which has left the position of the mutation ambiguous. The true mutation may be at the indicated position, or at any one of a number of alternate positions.

Z18068
SNP names which are bold grey indicates that their exact position on the tree is uncertain. This SNP may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests.