HIDE SNP NAMES

The Big Tree: R-L617

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > Z2552 > L617

L617
FGC14937 Y9057
FGC14936
FGC14935
BY31967
BY31968
FGC14934 Y9056
FGC14951
Y17812
Y17807
Y17808
Y17809
Y17810
14780608-TTTTATTTTTGG-T
Y17800
Y17801
Y17813
Y17816
Y17814
18110517-CG-C
Y17815
Y17452
Y17805
Y17802
FGC67592
Y17803
Y17817
Y17804
Y17806
BY31964 FGC73522
Y17811
Y22430
A10650
6264143-T-G
BY31995 Y43681
6347953-G-A
FGC14933
FGC14954
8254457-A-T
8288243-C-A
8381683-A-G
FGC14955
FGC14957
FGC14959
FGC14963
14035874-C-T
15487265-T-C
15617187-G-C
FGC14972
17242759-C-T
FGC14977
FGC14978
FGC14980
FGC14983
FGC34799
FGC34800
BY32000
FGC14988
22832034-C-A
FGC14991
FGC34781
FGC14992
23552185-C-G
23552369-A-G
FGC14993
23795544-A-C
23805071-AAC-A
23968768-G-A
FGC14995
Y2:19214-A-T
FGC14952
23009685-G-A
FGC31068
FGC31070
FGC31062
FGC31072
FGC31069
Z40885
BY31988
BY31998
Z34958
BY31956
BY62918
Y29655
FGC17241 V1780
BY31960
BY31962
BY8121
BY180956
BY31963
BY31965
BY31966
BY54572
BY180446
14575985-G-T
BY31970
BY31974
BY180955
BY31978
BY31980
FGC24021 Y11250
BY31983
BY180651
BY31985
BY31986
BY31987
19412410-G-A
BY180954
BY31996
BY53267
BY32003
Plant
436455 YF05854
Plant
453216 YF05858
Plant
11830 YF04268
Plant
96105 YF04270
Plant
182593 YF04839
Plantt
235642 YF04841
Plant
230023
Parsons
248229
Olliver
497000
Teague
118858
Westmoreland
589374
Gribben
N81812
1k Genomes
HG01606
Ortiz
N45914
unknown
YF16360 IN17524
Gata
B215431
Strydom
360987
Weitzel
271705
Martin
126873
Gilbert
B216306
Martin
582607
Martin
142650

Overlay STR Data for an STR:


Porter
N28007
Oakes
H2290
Williamson
196041
A red background is used for men whose data has not yet been fully analyzed. His position on the tree is not yet final, and will in general be downstream of the current position. He may not be positive for all the SNPs/INDELs in the block he descends from.

Men whose NGS data have been fully analyzed are indicated with a grey background color.

Those men with a grey background and a pink bar to their left have been finalized, but haven't gone through as much scrutinity as earlier kits have. In particular, no search has been made for recurrent SNPs or other unusual mutations. For the vast majority of kits, this has no effect at all, but I will review them as necessary in the future.

19503820-T-C
FGC5577?
A green SNP name with a '?' indicates that the SNP's status for the block is uncertain, but assumed to be positive. The same SNP probably occurs in an upstream block. It will be necessary to check BAM files or perhaps Sanger sequence some men to prove the result.

CTS4296
22233413-G-A
Mutations written with a red background fall within a region of the Y chromosome, such as the palindromic region, which has left the position of the mutation ambiguous. The true mutation may be at the indicated position, or at any one of a number of alternate positions.

Z18068
SNP names which are bold grey indicates that their exact position on the tree is uncertain. This SNP may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests.