HIDE SNP NAMES

The Big Tree: R-Z18123

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > Z2534 > ZZ5 > Z2185 > BY44331 > Z2186 > L1066 > CTS9881 > Z18123

Z18123 Y6067
Z18124 Y7738
Z18125 Y6062
Y6064 FGC32680
CTS12974
CTS8167
CTS9251
25342395-G-A
Z18126
Z18127
Z18128
Z18129
Z18130
BY15542
F15614
BY15543
BY15544
BY15545
BY15546
BY15547
CTS4296
24961563-A-C
25059639-G-A
BY89429
Y8603 FGC32679
A2072
22233413-G-A
A2074
A2076 Y12454
A2077
A2078
A2079
A2080 Y12455
A7500
A7501
A7502
A7503
BY42459
BY40367
BY60183
BY40368
BY40369
BY40370
BY40371
BY40372
BY40373
BY108435
8546335-CCCTCAGTAGATTGTATT-TTCTCACCAGATTGTATC
Fitzpatrick
289541
Shea
319427 319427
Shea
43219
O'Shea
27770
O'Shea
161481
Goff
B2394
Coker
141217 141217
Coker
B7314 B7314
Coker
B10490 B10490
Redgate
B11383
Cockburn
335989
1k Genomes
NA06984
McElroy
157233
Bryant
366173
Smoot
27418
Smout
N142496
Smout
N142497

Overlay STR Data for an STR:


Porter
N28007
Oakes
H2290
Williamson
196041
A red background is used for men whose data has not yet been fully analyzed. His position on the tree is not yet final, and will in general be downstream of the current position. He may not be positive for all the SNPs/INDELs in the block he descends from.

Men whose NGS data have been fully analyzed are indicated with a grey background color.

Those men with a grey background and a pink bar to their left have been finalized, but haven't gone through as much scrutinity as earlier kits have. In particular, no search has been made for recurrent SNPs or other unusual mutations. For the vast majority of kits, this has no effect at all, but I will review them as necessary in the future.

A242
FGC18232?
A red SNP name with a '?' indicates that the SNP's status for the block is uncertain, but assumed to be negative. The same SNP probably occurs in a parallel block. It will be necessary to check BAM files or perhaps Sanger sequence some men to prove the result.

CTS4296
22233413-G-A
Mutations written with a red background fall within a region of the Y chromosome, such as the palindromic region, which has left the position of the mutation ambiguous. The true mutation may be at the indicated position, or at any one of a number of alternate positions.

Z18068
SNP names which are bold grey indicates that their exact position on the tree is uncertain. This SNP may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests.