Upstream Blocks:

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > L1335/S530

Children:

L1065, Z16450, FT247377

Displays:

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All R-L1335/S530 men
Generate a csv format spreadsheet of all downstream mutations.


Just for this block
This block and all downstream blocks
hg19 hg38

Mutations in Block:

NamesRegionUncMcDonald BEDcombBEDPOS-ANC-DER (hg19)POS-ANC-DER (hg38)Notes
L1335 S530 YY23154201-A-G20992315-A-G
S730 AMM298 YY14316964-G-C12196258-G-C
S737 AMM304 YY17958045-A-C15846165-A-C
PT1 Y2984 FGC9557 AMM312 YY22185765-C-G20023879-C-G
S747 AMM313 YY22201567-G-T20039681-G-T
S5285 23955750-C-T21809603-C-T
S5284 YY8228683-G-C8360642-G-C
S5264 YY8312986-C-A8444945-C-A
S5257 SK2131 YY8657215-C-A8789174-C-A
S5280 DYZ19 22239162-G-A20077276-G-A
S745 AMM311 Y22171494-A-G20009608-A-G
CTS3057 UncY14635223-C-T12523292-C-T
S736 AMM303 UncY17379207-C-T15267327-C-T
M10953 S738 AM01356 Y18861458-T-G16749578-T-G
FGC9560 Unc3354021-T-C3485980-T-C
Unc:--10928480-ACATTT-A
FGC78242 Unc:--11669215-T-A

For some mutations, their exact position on the tree is uncertain. The mutation may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs/INDELs found in FGC kits or 1kG kits in regions not covered by BigY tests.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin, The Russian Journal of Genetic Genealogy (Русская версия), Vol 6, No 2 (2014)/Vol 7, No 1 (2015).

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Data

The data below reveals the progression of changes in the haplotype. These are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are a work in progress, and any suggested modifications are appreciated. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211

Age Analysis - Iain McDonald Method (Work in Progress)

Using the aging method developed by Iain McDonald, the median age of this block is 3151.36 YBP (1202 BC). The 95% confidence interval is 1856 BC to 614 BC.
MeasureAge (YBP)
Mean3150.2
Median3151.4
Mode3160.0
Age analysis lasted updated 2017-10-03. Only those men and blocks availble at that time were included in the analysis.
Aging parameters: allBED=16932597 allBED2=10678394 iainBED=10144626 iainBED2=7737782 combBED=8462581 combBED2=7823787 adjNumVars=0