Big Tree: Information for L1335/S530
Lead With SNP: L1335/S530.
YSEQ Group 18: If you are R-L1335/S530 and have tested with YSEQ, please join YSEQ Group 18.
Upstream Blocks:
Children:
Displays:
Mutations in Block:
Names | Region | Unc | McDonald BED | combBED | POS-ANC-DER (hg19) | POS-ANC-DER (hg38) | Notes |
---|---|---|---|---|---|---|---|
L1335 S530 | Y | Y | 23154201-A-G | 20992315-A-G | |||
S730 AMM298 | Y | Y | 14316964-G-C | 12196258-G-C | |||
S737 AMM304 | Y | Y | 17958045-A-C | 15846165-A-C | |||
PT1 Y2984 FGC9557 AMM312 | Y | Y | 22185765-C-G | 20023879-C-G | |||
S747 AMM313 | Y | Y | 22201567-G-T | 20039681-G-T | |||
S5285 | 23955750-C-T | 21809603-C-T | |||||
S5284 | Y | Y | 8228683-G-C | 8360642-G-C | |||
S5264 | Y | Y | 8312986-C-A | 8444945-C-A | |||
S5257 SK2131 | Y | Y | 8657215-C-A | 8789174-C-A | |||
S5280 | DYZ19 | 22239162-G-A | 20077276-G-A | ||||
S745 AMM311 | Y | 22171494-A-G | 20009608-A-G | ||||
CTS3057 | Unc† | Y | 14635223-C-T | 12523292-C-T | |||
S736 AMM303 | Unc† | Y | 17379207-C-T | 15267327-C-T | |||
M10953 S738 AM01356 | Y | 18861458-T-G | 16749578-T-G | ||||
FGC9560 | Unc† | 3354021-T-C | 3485980-T-C | ||||
Unc† | :-- | 10928480-ACATTT-A | |||||
FGC78242 | Unc† | :-- | 11669215-T-A |
†For some mutations, their exact position on the tree is uncertain. The mutation may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs/INDELs found in FGC kits or 1kG kits in regions not covered by BigY tests.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin, The Russian Journal of Genetic Genealogy (Русская версия), Vol 6, No 2 (2014)/Vol 7, No 1 (2015).
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.