Block Information

Upstream Blocks:

Children:

Displays:

Mutations in Block:

Names	Region	Unc	McDonald BED	combBED	Position
L1335 S530			Y	Y	hg19:Y:23154201-A-G hg38:Y:20992315-A-G
S730 AMM298			Y	Y	hg19:Y:14316964-G-C hg38:Y:12196258-G-C
S737 AMM304			Y	Y	hg19:Y:17958045-A-C hg38:Y:15846165-A-C
PT1 Y2984 FGC9557 AMM312			Y	Y	hg19:Y:22185765-C-G hg38:Y:20023879-C-G
S747 AMM313			Y	Y	hg19:Y:22201567-G-T hg38:Y:20039681-G-T
S5285					hg19:Y:23955750-C-T hg38:Y:21809603-C-T
S5284			Y	Y	hg19:Y:8228683-G-C hg38:Y:8360642-G-C
S5264			Y	Y	hg19:Y:8312986-C-A hg38:Y:8444945-C-A
S5257 SK2131			Y	Y	hg19:Y:8657215-C-A hg38:Y:8789174-C-A
S5280	DYZ19				hg19:Y:22239162-G-A hg38:Y:20077276-G-A
S745 AMM311			Y		hg19:Y:22171494-A-G hg38:Y:20009608-A-G
CTS3057		Unc^†	Y		hg19:Y:14635223-C-T hg38:Y:12523292-C-T
S736 AMM303		Unc^†	Y		hg19:Y:17379207-C-T hg38:Y:15267327-C-T
M10953 S738 AM01356			Y		hg19:Y:18861458-T-G hg38:Y:16749578-T-G
FGC9560		Unc^†			hg19:Y:3354021-T-C hg38:Y:3485980-T-C
		Unc^†			hg38:Y:10928480-ACATTT-A
FGC78242	DYZ17	Unc^†			hg38:Y:11669215-T-A

^†For some mutations, their exact position on the tree is uncertain. The mutation may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs/INDELs found in FGC kits or 1kG kits in regions not covered by BigY tests.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin, The Russian Journal of Genetic Genealogy (Русская версия), Vol 6, No 2 (2014)/Vol 7, No 1 (2015).

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Data

The data below reveals the progression of changes in the haplotype. These are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are a work in progress, and any suggested modifications are appreciated. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

	DYS393	DYS390	DYS19	DYS391	DYS385	DYS426	DYS388	DYS439	DYS389i	DYS392	DYS389ii	DYS458	DYS459	DYS455	DYS454	DYS447	DYS437	DYS448	DYS449	DYS464	DYS460	Y-GATA-H4	YCAII	DYS456	DYS607	DYS576	DYS570	CDY	DYS442	DYS438	DYS531	DYS578	DYF395S1	DYS590	DYS537	DYS641	DYS472	DYF406S1	DYS511	DYS425	DYS413	DYS557	DYS594	DYS436	DYS490	DYS534	DYS450	DYS444	DYS481	DYS520	DYS446	DYS617	DYS568	DYS487	DYS572	DYS640	DYS492	DYS565	DYS710	DYS485	DYS632	DYS495	DYS540	DYS714	DYS716	DYS717	DYS505	DYS556	DYS549	DYS589	DYS522	DYS494	DYS533	DYS636	DYS575	DYS638	DYS462	DYS452	DYS445	Y-GATA-A10	DYS463	DYS441	Y-GGAAT-1B07	DYS525	DYS712	DYS593	DYS650	DYS532	DYS715	DYS504	DYS513	DYS561	DYS552	DYS726	DYS635	DYS587	DYS643	DYS497	DYS510	DYS434	DYS461	DYS435
P312/S116	13	24	14	11	11-14	12	12	12	13	13	29	17	9-10	11	11	25	15	19	29	15-15-17-17	11	11	19-23	16	15	18	17	36-38	12	12	11	9	15-16	8	10	10	8	10	10	12	23-23	16	10	12	12	15	8	12	22	20	13	12	11	13	11	11	12	12	33	15	9	16	12	26	26	19	12	11	13	12	10	9	12	12	10	11	11	30	12	13	24	13	10	10	20	15	19	13	24	17	12	15	24	12	23	18	10	14	17	9	12	11
L21/S145	13	24	14	11	11-14	12	12	12	13	13	29	17	9-10	11	11	25	15	19	29	15-15-17-17	11	11	19-23	16	15	18	17	36-38	12	12	11	9	15-16	8	10	10	8	10	10	12	23-23	16	10	12	12	15	8	12	22	20	13	12	11	13	11	11	12	12	35	15	9	16	12	25	26	19	12	11	13	12	11	9	12	12	10	11	11	30	12	13	24	13	10	10	20	15	19	13	24	17	12	15	24	12	23	18	10	14	17	9	12	11

Age Analysis - Iain McDonald Method (Work in Progress)

Using the aging method developed by Iain McDonald, the median age of this block is 3151.36 YBP (1202 BC). The 95% confidence interval is 1856 BC to 614 BC.

Measure	Age (YBP)
Mean	3150.2
Median	3151.4
Mode	3160.0