Big Tree: Information for BY15423

Lead With SNP: BY15423.

Upstream Blocks:

R-P312/S116 > Z46521 > Z46516 > FGC84729 > ZZ37 > ZZ38 > L624/S389 > Z30600 > BY15423

Children:

BY60554, BY73384

Displays:

Do you wish show the block tree for this branch?


All 7 R-BY15423 men
The 3 R-BY15423* men
Do you wish show the mutation matrix for the descendants on this branch?

All 7 R-BY15423 men
The 3 R-BY15423* men

This request takes a few seconds.
Show the mutation matrix for repeats on this branch

All 7 R-BY15423 men
The 3 R-BY15423* men
Size of repeat motif:

This request takes a few seconds.
Show the STR mutation matrix for this branch

All 7 R-BY15423 men
The 3 R-BY15423* men

This request takes a few seconds.
Generate a csv format spreadsheet of all downstream mutations.


Just for this block
This block and all downstream blocks
hg19 hg38

Mutations in Block:

NamesRegionUncMcDonald BEDcombBEDPositionNotes
BY15423 YYhg19:Y:6863878-G-A hg38:Y:6995837-G-A
BY15424 YYhg19:Y:7267464-C-G hg38:Y:7399423-C-G
BY15425 YYhg19:Y:7267521-C-G hg38:Y:7399480-C-G
BY15426 YYhg19:Y:7855971-G-A hg38:Y:7987930-G-A
BY15427 YYhg19:Y:14656069-C-T hg38:Y:12544134-C-T
BY15428 YYhg19:Y:16347439-A-G hg38:Y:14235559-A-G
BY15429 YYhg19:Y:16659977-A-T hg38:Y:14548097-A-T
BY15430 YYhg19:Y:16988295-G-A hg38:Y:14876415-G-A
BY15431 YYhg19:Y:17255996-C-G hg38:Y:15144116-C-G
BY15432 YYhg19:Y:17562921-C-G hg38:Y:15451041-C-G
BY15433 YYhg19:Y:18105390-T-A hg38:Y:15993510-T-A
BY15434 YYhg19:Y:19393538-C-G hg38:Y:17281658-C-G
BY15435 YYhg19:Y:21203264-C-T hg38:Y:19041378-C-T
BY15436 YYhg19:Y:21299064-C-G hg38:Y:19137178-C-G
BY15437 YYhg19:Y:21749583-G-A hg38:Y:19587697-G-A
BY15438 YYhg19:Y:21872518-G-A hg38:Y:19710632-G-A
BY15439 YYhg19:Y:21977786-G-C hg38:Y:19815900-G-C
BY15440 DYZ19 hg19:Y:22440975-A-G hg38:Y:20279089-A-G
BY15441 DYZ19 hg19:Y:22461281-G-C hg38:Y:20299395-G-C
BY15442 YYhg19:Y:22626530-C-A hg38:Y:20464644-C-A
BY15443 YYhg19:Y:23607134-A-G hg38:Y:21445248-A-G
P4_Prx hg19:Y:20627055-C-T hg38:Y:18465169-C-T
hg19:Y:23728154-C-T hg38:Y:21566268-C-T
P4_Gap hg19:Y:20810735-G-A hg38:Y:18648849-G-A
Unc†hg38:Y2:12719-G-A
BY197208 Unc†YYhg19:Y:14054034-A-C hg38:Y:11933328-A-C
BY95233 Unc†YYhg19:Y:14364621-C-G hg38:Y:12243916-C-G
BY197383 Unc†Yhg19:Y:16070617-C-T hg38:Y:13958737-C-T
BY181858 Unc†YYhg19:Y:17951718-G-T hg38:Y:15839838-G-T
BY197631 Unc†YYhg19:Y:19251368-G-A hg38:Y:17139488-G-A
BY44277 Unc†hg19:Y:28644258-A-G hg38:Y:26498111-A-G
FT14704 Unc†hg19:Y:2918390-G-A hg38:Y:3050349-G-A
FT16399 Unc†hg19:Y:4369007-G-A hg38:Y:4500966-G-A
Unc†hg19:Y:4875984-GT-G hg38:Y:5007943-GT-G
FT18025 Unc†hg19:Y:5801170-G-C hg38:Y:5933129-G-C
FT18291 Unc†hg19:Y:6044553-G-A hg38:Y:6176512-G-A
FT120176 Unc†hg38:Y:10828518-C-G
FT20980 Unc†YYhg19:Y:14041138-C-A hg38:Y:11920432-C-A

*Mutations whose exact position can't be determined precisely from NGS tests, such as those in palindromes, are shown with a pink background.

*Y2 refers to the Y_KI270740v1_random contig for the hg38 reference sequence.

†For some mutations, their exact position on the tree is uncertain. The mutation may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs/INDELs found in FGC kits or 1kG kits in regions not covered by BigY tests.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin, The Russian Journal of Genetic Genealogy (Русская версия), Vol 6, No 2 (2014)/Vol 7, No 1 (2015).

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Data

The data below reveals the progression of changes in the haplotype. These are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are a work in progress, and any suggested modifications are appreciated. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211

The data below are the haplotypes of the immediate descendent blocks and men. There is one row for each downstream block or man who directly descends from this block. Coloring shows the mutations relative to the most immediate available upstream haplotype.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
1093731325141111-14121212131329189-1011112515193015-15-17-17111119-231615191738-38111211915-1681110810101223-23171014121681422211412111311111212

Age Analysis - Iain McDonald Method (Work in Progress)

Using the aging method developed by Iain McDonald, the median age of this block is 1531.65 YBP (419 AD). The 95% confidence interval is 264 BC to 945 AD.
MeasureAge (YBP)
Mean1543.2
Median1531.7
Mode1520.0
Age analysis lasted updated 2017-10-03. Only those men and blocks availble at that time were included in the analysis.
Aging parameters: allBED=10824323 allBED2=10579844 iainBED=7856842 iainBED2=7642643 combBED=7935020 combBED2=7713918 adjNumVars=0