unknown
BigY2: 23018, BigY3: 23018Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 23018 | BigY3 23018 |
---|---|---|---|---|---|---|---|---|---|
5127879-G-A | 5259838-G-A | FT114175 | A+ | ||||||
7756633-C-T | 7888592-C-T | BY67404 | Y | + | + | ||||
11001758-C-T | FT393275 | + | |||||||
28429709-AAAC-A | 26283562-AAAC-A | P1_gr2 | 6×AAC | + | ** | ||||
13842725-A-G | 11722019-A-G | * | |||||||
10834245-G-A | ** | ||||||||
10758325-A-C | ** | ||||||||
10760790-T-G | ** | ||||||||
10781626-C-T | ** | ||||||||
10808596-C-A | ** | ||||||||
10857748-C-CACCCG | ** | ||||||||
10842704-C-A | ** | ||||||||
10855668-C-A | ** | ||||||||
10857769-A-T | ** | ||||||||
10857782-A-ATTCT | ** | ||||||||
10859018-T-G | ** | ||||||||
10884482-C-A | ** | ||||||||
10889459-A-C | ** | ||||||||
10693239-CA-C | ** | ||||||||
58974026-C-T | 56827879-C-T | ** | |||||||
10693238-C-A | ** | ||||||||
10892557-C-CCAATCCAGTT | ** | ||||||||
10691077-C-G | ** | ||||||||
10691042-C-G | ** | ||||||||
10670891-C-A | ** | ||||||||
10631461-C-G | ** | ||||||||
9929890-T-A | 10092281-T-A | ** | |||||||
9929765-A-C | 10092156-A-C | ** | |||||||
9928428-G-T | 10090819-G-T | ** | |||||||
9805189-T-C | 9967580-T-C | ** | |||||||
9574870-G-T | 9737261-G-T | IR3_Prx | ** | ||||||
9015264-A-T | 9177655-A-T | ** | |||||||
8981580-A-G | 9143971-A-G | ** | |||||||
8692412-T-G | 8824371-T-G | ** | |||||||
8692361-C-A | 8824320-C-A | ** | |||||||
10691080-CTGCACTGAAT-C | ** | ||||||||
10924839-T-G | ** | ||||||||
10892567-C-A | ** | ||||||||
13857730-C-A | 11737024-C-A | ** | |||||||
14688720-A-C | 12576786-A-C | ** | |||||||
14661438-T-G | 12549503-T-G | ** | |||||||
14458272-C-A | 12337545-C-A | ** | |||||||
14445418-A-G | 12324691-A-G | ** | |||||||
14268545-T-A | 12147839-T-A | ** | |||||||
14239320-A-C | 12118614-A-C | ** | |||||||
14079789-T-C | 11959083-T-C | ** | |||||||
14075937-G-C | 11955231-G-C | ** | |||||||
13997784-T-A | 11877078-T-A | ** | |||||||
13981504-G-T | 11860798-G-T | ** | |||||||
13961410-T-C | 11840704-T-C | ** | |||||||
13930061-G-A | 11809355-G-A | ** | |||||||
13899206-T-A | 11778500-T-A | ** | |||||||
13891664-C-A | 11770958-C-A | ** | |||||||
11668471-A-C | ** | ||||||||
10892568-C-CATTGG | ** | ||||||||
11649924-A-C | ** | ||||||||
11649491-T-C | ** | ||||||||
13644008-T-A | 11488332-T-A | ** | |||||||
13586166-T-A | 11430490-T-A | ** | |||||||
13566602-C-A | 11410926-C-A | ** | |||||||
13564482-C-T | 11408806-C-T | ** | |||||||
13468598-A-C | 11312922-A-C | ** | |||||||
13468301-A-G | 11312625-A-G | ** | |||||||
13255441-C-A | 11099765-C-A | ** | |||||||
13222215-A-G | 11066539-A-G | ** | |||||||
13206707-A-C | 11051031-A-C | ** | |||||||
10960241-C-T | ** | ||||||||
10959715-C-T | ** | ||||||||
10947790-C-A | ** | ||||||||
7970303-A-G | 8102262-A-G | ** | |||||||
7709519-C-A | 7841478-C-A | ** | |||||||
7964581-T-G | 8096540-T-G | ** | |||||||
3766695-T-G | 3898654-T-G | ** | |||||||
5108603-G-T | 5240562-G-T | ** | |||||||
5084326-C-A | 5216285-C-A | ** | |||||||
5051102-G-T | 5183061-G-T | ** | |||||||
4868312-A-G | 5000271-A-G | ** | |||||||
4840801-C-A | 4972760-C-A | ** | |||||||
4795907-G-A | 4927866-G-A | ** | |||||||
4702790-C-A | 4834749-C-A | ** | |||||||
4571439-G-T | 4703398-G-T | ** | |||||||
4445078-A-T | 4577037-A-T | ** | |||||||
4302039-A-G | 4433998-A-G | ** | |||||||
4114957-C-A | 4246916-C-A | ** | |||||||
4041088-G-T | 4173047-G-T | ** | |||||||
3840037-C-A | 3971996-C-A | ** | |||||||
3839642-C-A | 3971601-C-A | ** | |||||||
3759279-A-G | 3891238-A-G | ** | |||||||
5292144-C-A | 5424103-C-A | ** | |||||||
3641434-A-C | 3773393-A-C | ** | |||||||
3641383-T-G | 3773342-T-G | ** | |||||||
3598896-T-A | 3730855-T-A | ** | |||||||
3349475-C-A | 3481434-C-A | ** | |||||||
3349300-A-C | 3481259-A-C | ** | |||||||
3293761-G-T | 3425720-G-T | ** | |||||||
3123319-C-A | 3255278-C-A | ** | |||||||
3076069-C-A | 3208028-C-A | 25×T | ** | ||||||
27976945-CA-C | 25830798-CA-C | P1_Y2 | 12×A | ** | |||||
9977345-C-A | 10139736-C-A | ** | |||||||
18766747-A-T | 16654867-A-T | ** | |||||||
23345886-C-A | 21184000-C-A | ** | |||||||
10952605-C-A | ** | ||||||||
13322462-C-A | 11166786-C-A | ** | |||||||
5248951-C-A | 5380910-C-A | ** | |||||||
5335204-C-A | 5467163-C-A | ** | |||||||
15402654-A-C | 13290774-A-C | ** | |||||||
6776142-C-A | 6908101-C-A | ** | |||||||
7384666-T-A | 7516625-T-A | ** | |||||||
7298742-C-A | 7430701-C-A | ** | |||||||
7276168-C-A | 7408127-C-A | ** | |||||||
7276109-C-A | 7408068-C-A | ** | |||||||
7275110-C-T | 7407069-C-T | ** | |||||||
7256698-G-T | 7388657-G-T | ** | |||||||
7255159-T-C | 7387118-T-C | ** | |||||||
7237277-A-C | 7369236-A-C | ** | |||||||
7221615-C-A | 7353574-C-A | ** | |||||||
7135329-T-A | 7267288-T-A | ** | |||||||
7114772-T-A | 7246731-T-A | ** | |||||||
7054233-T-A | 7186192-T-A | ** | |||||||
7012506-C-A | 7144465-C-A | ** | |||||||
6934749-T-A | 7066708-T-A | ** | |||||||
6514254-C-A | 6646213-C-A | ** | |||||||
5366990-G-T | 5498949-G-T | ** | |||||||
5873372-G-T | 6005331-G-T | ** | |||||||
5552586-G-T | 5684545-G-T | ** | |||||||
5649917-A-C | 5781876-A-C | ** | |||||||
5675580-A-C | 5807539-A-C | ** | |||||||
5777620-G-T | 5909579-G-T | ** | |||||||
5841992-C-A | 5973951-C-A | ** | |||||||
5853661-G-T | 5985620-G-T | ** | |||||||
5873464-A-C | 6005423-A-C | ** | |||||||
6491840-T-A | 6623799-T-A | ** | |||||||
6020173-G-T | 6152132-G-T | ** | |||||||
6069236-G-T | 6201195-G-T | ** | |||||||
6244346-C-T | 6376305-C-T | IR3_Dst | ** | ||||||
6310888-A-C | 6442847-A-C | IR3_Dst | ** | ||||||
6310891-A-T | 6442850-A-T | IR3_Dst | ** | ||||||
6490558-A-T | 6622517-A-T | ** | |||||||
15170151-G-T | 13058237-G-T | ** | |||||||
15683667-G-T | 13571787-G-T | ** | |||||||
15429589-C-A | 13317709-C-A | ** | |||||||
23719451-T-A | 21557565-T-A | ** | |||||||
24876942-A-G | 22730795-A-G | g1 | ** | ||||||
24385222-T-G | 22239075-T-G | ** | |||||||
24278996-G-T | 22132849-G-T | P3_t1 | ** | ||||||
24278983-G-T | 22132836-G-T | P3_t1 | ** | ||||||
24278980-C-A | 22132833-C-A | P3_t1 | ** | ||||||
24278973-G-T | 22132826-G-T | P3_t1 | ** | ||||||
23997106-C-T | 21850959-C-T | ** | |||||||
23884699-G-T | 21722813-G-T | ** | |||||||
23884695-C-A | 21722809-C-A | ** | |||||||
23790183-A-C | 21628297-A-C | ** | |||||||
23719505-A-C | 21557619-A-C | ** | |||||||
23719496-C-A | 21557610-C-A | ** | |||||||
23719492-T-A | 21557606-T-A | ** | |||||||
23719469-G-C | 21557583-G-C | ** | |||||||
23317897-C-A | 21156011-C-A | ** | |||||||
27620769-A-T | 25474622-A-T | P1_Y2 | ** | ||||||
23066348-C-A | 20904462-C-A | ** | |||||||
22979276-A-C | 20817390-A-C | ** | |||||||
22624893-A-C | 20463007-A-C | ** | |||||||
22593004-C-A | 20431118-C-A | ** | |||||||
22551147-A-G | 20389261-A-G | ** | |||||||
21589510-C-T | 19427624-C-T | ** | |||||||
21455603-T-G | 19293717-T-G | ** | |||||||
21242514-C-A | 19080628-C-A | ** | |||||||
21242506-A-T | 19080620-A-T | ** | |||||||
21111982-G-A | 18950096-G-A | ** | |||||||
21033026-T-A | 18871140-T-A | ** | |||||||
21002531-C-A | 18840645-C-A | P4_Dst | ** | ||||||
21002474-C-A | 18840588-C-A | P4_Dst | ** | ||||||
20840679-A-C | 18678793-A-C | P4_Gap | ** | ||||||
27462015-C-A | 25315868-C-A | P1_Y2 | ** | ||||||
27620785-A-T | 25474638-A-T | P1_Y2 | ** | ||||||
20633723-C-A | 18471837-C-A | P4_Prx | ** | ||||||
28688259-C-A | 26542112-C-A | ** | |||||||
4037377-A-G | 4169336-A-G | ** | |||||||
27538104-CT-C | 25391957-CT-C | P1_Y2 | 23×T | ** | |||||
56850973-CTG-T | ** | ||||||||
56848430-A-T | ** | ||||||||
56844092-C-T | ** | ||||||||
56838773-T-C | ** | ||||||||
56834910-A-C | ** | ||||||||
56830183-C-A | ** | ||||||||
28818204-A-ATTTTT | 26672057-A-ATTTTT | ** | |||||||
28794192-G-A | 26648045-G-A | ** | |||||||
28788095-G-C | 26641948-G-C | ** | |||||||
28779726-A-C | 26633579-A-C | ** | |||||||
28703383-C-A | 26557236-C-A | ** | |||||||
28698840-T-G | 26552693-T-G | ** | |||||||
28688012-T-A | 26541865-T-A | ** | |||||||
27620787-A-T | 25474640-A-T | P1_Y2 | ** | ||||||
28581118-T-G | 26434971-T-G | ** | |||||||
27620795-A-T | 25474648-A-T | P1_Y2 | ** | ||||||
27620810-C-G | 25474663-C-G | P1_Y2 | ** | ||||||
27620821-G-T | 25474674-G-T | P1_Y2 | ** | ||||||
27861922-T-G | 25715775-T-G | P1_Y2 | ** | ||||||
27976867-G-T | 25830720-G-T | P1_Y2 | ** | ||||||
28514655-A-C | 26368508-A-C | ** | |||||||
28583900-G-T | 26437753-G-T | ** | |||||||
28678885-A-C | 26532738-A-C | ** | |||||||
28585808-C-A | 26439661-C-A | ** | |||||||
28601917-G-A | 26455770-G-A | ** | |||||||
28622001-A-C | 26475854-A-C | ** | |||||||
28622003-A-C | 26475856-A-C | ** | |||||||
28653139-T-G | 26506992-T-G | ** | |||||||
28655331-G-A | 26509184-G-A | ** | |||||||
20711548-G-GTTTTT | 18549662-G-GTTTTT | P4_Prx | 17×T | ** | |||||
20557606-T-A | 18395720-T-A | P5_Dst | ** | ||||||
19302730-G-T | 17190850-G-T | ** | |||||||
16828984-C-A | 14717104-C-A | ** | |||||||
17991330-G-T | 15879450-G-T | P7_Prx | ** | ||||||
17991311-T-A | 15879431-T-A | P7_Prx | ** | ||||||
17991307-G-T | 15879427-G-T | P7_Prx | ** | ||||||
17923578-G-T | 15811698-G-T | ** | |||||||
17794218-C-G | 15682338-C-G | ** | |||||||
17770480-C-A | 15658600-C-A | ** | |||||||
17466612-C-A | 15354732-C-A | ** | |||||||
17464907-C-A | 15353027-C-A | ** | |||||||
17251002-T-A | 15139122-T-A | ** | |||||||
17250992-T-A | 15139112-T-A | ** | |||||||
17250989-T-A | 15139109-T-A | ** | |||||||
17217028-C-A | 15105148-C-A | ** | |||||||
17084955-A-T | 14973075-A-T | ** | |||||||
16829276-A-C | 14717396-A-C | ** | |||||||
16466406-T-A | 14354526-T-A | ** | |||||||
18353491-A-C | 16241611-A-C | P6_Prx | ** | ||||||
16425615-T-G | 14313735-T-G | ** | |||||||
16412413-A-T | 14300533-A-T | ** | |||||||
16399958-T-C | 14288078-T-C | ** | |||||||
16320087-A-C | 14208207-A-C | ** | |||||||
16215192-A-G | 14103312-A-G | ** | |||||||
16205828-C-A | 14093948-C-A | ** | |||||||
16073028-G-A | 13961148-G-A | ** | |||||||
16052391-A-C | 13940511-A-C | ** | |||||||
16030099-C-A | 13918219-C-A | ** | |||||||
16002429-G-T | 13890549-G-T | ** | |||||||
15932412-A-C | 13820532-A-C | ** | |||||||
15932286-A-C | 13820406-A-C | ** | |||||||
15758818-T-A | 13646938-T-A | ** | |||||||
15717995-T-G | 13606115-T-G | ** | |||||||
18154406-A-T | 16042526-A-T | ** | |||||||
18353509-A-C | 16241629-A-C | P6_Prx | ** | ||||||
19935982-G-T | 17824102-G-T | BY212018 | P5_Prx | ** | |||||
19546340-C-A | 17434460-C-A | ** | |||||||
19866950-C-A | 17755070-C-A | P5_Prx | ** | ||||||
19788543-C-A | 17676663-C-A | P5_Prx | ** | ||||||
19788527-T-A | 17676647-T-A | P5_Prx | ** | ||||||
19788523-T-A | 17676643-T-A | P5_Prx | ** | ||||||
19758671-A-G | 17646791-A-G | P5_Prx | ** | ||||||
19749198-G-T | 17637318-G-T | P5_Prx | ** | ||||||
19694849-G-T | 17582969-G-T | P5_Prx | ** | ||||||
19694834-G-T | 17582954-G-T | P5_Prx | ** | ||||||
19694820-A-T | 17582940-A-T | P5_Prx | ** | ||||||
19694818-C-A | 17582938-C-A | P5_Prx | ** | ||||||
19694812-A-T | 17582932-A-T | P5_Prx | ** | ||||||
19694807-C-G | 17582927-C-G | P5_Prx | ** | ||||||
19671821-T-A | 17559941-T-A | P5_Prx | ** | ||||||
19611993-T-G | 17500113-T-G | P5_Prx | ** | ||||||
19517802-T-G | 17405922-T-G | ** | |||||||
18378925-T-G | 16267045-T-G | P6_Prx | ** | ||||||
18924943-A-G | 16813063-A-G | ** | |||||||
18390069-C-A | 16278189-C-A | P6_Gap | ** | ||||||
18533452-A-T | 16421572-A-T | P6_Dst | ** | ||||||
18533468-A-T | 16421588-A-T | P6_Dst | ** | ||||||
18533472-A-T | 16421592-A-T | P6_Dst | ** | ||||||
18688324-G-T | 16576444-G-T | ** | |||||||
18873913-A-T | 16762033-A-T | FGC70928 | ** | ||||||
18937515-C-A | 16825635-C-A | FT99551 | ** | ||||||
19393041-C-A | 17281161-C-A | ** | |||||||
19052447-G-T | 16940567-G-T | ** | |||||||
19213615-T-A | 17101735-T-A | ** | |||||||
19248329-T-G | 17136449-T-G | ** | |||||||
19248359-A-T | 17136479-A-T | ** | |||||||
19330367-A-C | 17218487-A-C | ** | |||||||
19351457-C-A | 17239577-C-A | ** | |||||||
10884516-C-A | ** | ||||||||
2729827-G-T | 2861786-G-T | ** | |||||||
8238298-C-A | 8370257-C-A | ** | |||||||
26186640-T-G | 24040493-T-G | P1_Y1 | ** | ||||||
13453283-TGATTC-T | 11297607-TGATTC-T | ** | |||||||
13453281-T-C | 11297605-T-C | ** | |||||||
7621941-C-A | 7753900-C-A | ** | |||||||
28781391-G-T | 26635244-G-T | ** | |||||||
27861917-C-A | 25715770-C-A | P1_Y2 | ** | ||||||
11653210-C-A | ** | ||||||||
28794196-T-A | 26648049-T-A | ** | |||||||
23719482-T-G | 21557596-T-G | ** | |||||||
11003725-C-CTGCGT | ** | ||||||||
11003723-CA-C | ** | ||||||||
5644452-C-A | 5776411-C-A | ** | |||||||
24409251-G-T | 22263104-G-T | ** | |||||||
13974681-C-A | 11853975-C-A | ** | |||||||
14513089-C-A | 12401294-C-A | ** | |||||||
9307448-C-A | 9469839-C-A | ** | |||||||
16063113-C-A | 13951233-C-A | ** | |||||||
28747704-C-A | 26601557-C-A | ** | |||||||
10653164-A-T | ** | ||||||||
10677466-C-A | ** | ||||||||
14570756-ATTTTTTT-A | 12458956-ATTTTTTT-A | 22×T | ** | ||||||
13200508-C-A | 11044832-C-A | ** | |||||||
10992321-A-ATTAGG | ** | ||||||||
10934253-C-T | ** | ||||||||
16246164-C-A | 14134284-C-A | ** | |||||||
10955438-C-T | ** | ||||||||
10955430-C-G | ** | ||||||||
7197570-ATTT-A | 7329529-ATTT-A | 19×T | ** | ||||||
11030192-C-G | ** | ||||||||
2926417-C-A | 3058376-C-A | ** | |||||||
13462270-AC-A | 11306594-AC-A | ** | |||||||
11028210-C-A | ** | ||||||||
13596929-C-A | 11441253-C-A | ** | |||||||
7102445-C-A | 7234404-C-A | ** | |||||||
10744549-T-C | ** | ||||||||
13457742-A-T | 11302066-A-T | ** | |||||||
28624571-C-A | 26478424-C-A | ** | |||||||
6310898-C-A | 6442857-C-A | IR3_Dst | ** | ||||||
5523071-C-A | 5655030-C-A | ** | |||||||
11037143-C-A | ** | ||||||||
17210899-T-G | 15099019-T-G | ** | |||||||
16990260-G-T | 14878380-G-T | ** | |||||||
7307685-C-A | 7439644-C-A | ** | |||||||
19168744-C-A | 17056864-C-A | ** | |||||||
2665471-C-A | 2797430-C-A | ** | |||||||
13468270-A-T | 11312594-A-T | ** | |||||||
11028207-C-T | ** | ||||||||
13462287-A-G | 11306611-A-G | ** | |||||||
10841018-A-T | ** | ||||||||
18611617-C-A | 16499737-C-A | ** | |||||||
13855554-T-TAC | 11734848-T-TAC | ** | |||||||
16172137-C-A | 14060257-C-A | ** | |||||||
23009211-C-A | 20847325-C-A | ** | |||||||
3725762-C-A | 3857721-C-A | ** | |||||||
10918233-G-T | ** | ||||||||
10845679-T-A | ** | ||||||||
23082130-A-G | 20920244-A-G | ** | |||||||
24660548-G-T | 22514401-G-T | P3_b2 | ** | ||||||
7225700-C-A | 7357659-C-A | ** | |||||||
10964759-C-T | ** | ||||||||
13462297-C-T | 11306621-C-T | ** | |||||||
17217164-T-A | 15105284-T-A | ** | |||||||
8314146-C-A | 8446105-C-A | 24×T | ** | ||||||
10808635-G-A | ** | ||||||||
22963482-C-A | 20801596-C-A | ** | |||||||
19216386-C-A | 17104506-C-A | ** | |||||||
16679404-ATTT-A | 14567524-ATTT-A | 18×T | ** | ||||||
10760345-C-T | ** | ||||||||
10760322-C-T | ** | ||||||||
10851032-T-C | ** | ||||||||
10751176-T-C | ** | ||||||||
10751158-C-T | ** | ||||||||
10751155-A-T | ** | ||||||||
14299901-C-A | 12179195-C-A | ** | |||||||
11643349-C-A | BY89849 | ** | |||||||
10845678-T-G | ** | ||||||||
28757951-C-A | 26611804-C-A | ** | |||||||
13485623-T-C | 11329947-T-C | ** | |||||||
3076054-C-T | 3208013-C-T | ** | |||||||
21556953-G-T | 19395067-G-T | ** | |||||||
28614844-CTT-C | 26468697-CTT-C | 13×T | ** | ||||||
58979097-ATTGCATTCCC-A | 56832950-ATTGCATTCCC-A | ** | |||||||
28818244-A-T | 26672097-A-T | ** | |||||||
58992459-T-C | 56846312-T-C | ** | |||||||
58992457-A-C | 56846310-A-C | ** | |||||||
13199164-C-CAAAA | 11043488-C-CAAAA | 18×A | ** | ||||||
27417760-TTA-T | 25271613-TTA-T | P1_g3 | 24×TA | ** | |||||
13457760-C-G | 11302084-C-G | ** | |||||||
4932881-C-G | 5064840-C-G | Z25561 | ** | ||||||
2814892-T-A | 2946851-T-A | ** | |||||||
13468606-G-A | 11312930-G-A | ** | |||||||
13839806-G-A | 11719100-G-A | Y132195 | ** | ||||||
58985487-G-T | 56839340-G-T | ** | |||||||
10744375-A-C | ** | ||||||||
10866084-C-CTCTGTT | ** | ||||||||
17246829-C-A | 15134949-C-A | ** | |||||||
10845751-C-G | ** | ||||||||
10678986-C-G | ** | ||||||||
10678974-C-A | ** | ||||||||
16828884-C-A | 14717004-C-A | ** | |||||||
17210927-T-A | 15099047-T-A | ** | |||||||
9942900-A-C | 10105291-A-C | ** | |||||||
13907687-C-A | 11786981-C-A | ** | |||||||
23439905-GTTT-G | 21278019-GTTT-G | 15×T | ** | ||||||
20998349-G-T | 18836463-G-T | P4_Dst | ** | ||||||
10788787-C-A | ** | ||||||||
10788777-G-C | ** | ||||||||
20434831-G-T | 18272945-G-T | P5_Dst | ** | ||||||
21863134-C-A | 19701248-C-A | ** | |||||||
18688521-C-CA | 16576641-C-CA | ** | |||||||
10845744-T-C | ** | ||||||||
11003742-C-G | ** | ||||||||
10845736-T-G | ** | ||||||||
10845708-T-G | ** | ||||||||
10802172-A-T | ** | ||||||||
8481034-GTATA-G | 8612993-GTATA-G | 12×TA | ** | ||||||
17210911-A-C | 15099031-A-C | ** | |||||||
10792699-A-T | ** | ||||||||
10878600-G-T | ** | ||||||||
7154636-A-C | 7286595-A-C | ** | |||||||
10845722-A-T | ** | ||||||||
10845693-T-G | ** | ||||||||
10691045-T-C | ** | ||||||||
56832936-C-G | ** | ||||||||
56832932-T-G | ** | ||||||||
14505965-C-A | 12394170-C-A | ** | |||||||
13487667-C-A | 11331991-C-A | ** | |||||||
19612059-A-AC | 17500179-A-AC | P5_Prx | ** | ||||||
3659235-G-T | 3791194-G-T | ** | |||||||
2708463-C-A | 2840422-C-A | ** | |||||||
4925379-C-A | 5057338-C-A | ** | |||||||
14052925-C-A | 11932219-C-A | ** | |||||||
22624899-C-T | 20463013-C-T | ** | |||||||
15168137-A-T | 13056223-A-T | ** | |||||||
7081363-A-ATT | 7213322-A-ATT | 14×T | ** | ||||||
10752531-C-A | ** | ||||||||
7235307-C-A | 7367266-C-A | ** | |||||||
20101796-G-T | 17989916-G-T | P5_Dst | ** | ||||||
10977071-T-TACACTCCACTGCACC | ** | ||||||||
6310924-T-A | 6442883-T-A | IR3_Dst | ** | ||||||
13457771-C-CAATTA | 11302095-C-CAATTA | ** | |||||||
19697727-C-A | 17585847-C-A | P5_Prx | ** | ||||||
17666622-G-T | 15554742-G-T | ** | |||||||
13487559-C-A | 11331883-C-A | ** | |||||||
17713847-C-A | 15601967-C-A | ** | |||||||
7385457-C-A | 7517416-C-A | ** | |||||||
22703627-AAAG-A | 20541741-AAAG-A | ** | |||||||
10929801-C-A | ** | ||||||||
21771439-C-A | 19609553-C-A | ** | |||||||
13468274-C-T | 11312598-C-T | ** | |||||||
10678994-T-C | ** | ||||||||
56752191-G-T | ** | ||||||||
10841021-C-G | ** | ||||||||
3272680-C-A | 3404639-C-A | ** | |||||||
10937373-T-C | ** | ||||||||
27861907-ACTC-A | 25715760-ACTC-A | P1_Y2 | ** | ||||||
7155431-C-A | 7287390-C-A | ** | |||||||
4114954-C-A | 4246913-C-A | ** | |||||||
10977965-C-A | ** | ||||||||
5627666-C-A | 5759625-C-A | FT130051 | ** | ||||||
16777781-C-A | 14665901-C-A | ** | |||||||
10808597-ATTCC-A | ** | ||||||||
5745399-C-A | 5877358-C-A | ** | |||||||
21954581-C-A | 19792695-C-A | ** | |||||||
17030699-C-A | 14918819-C-A | ** | |||||||
10815939-C-A | ** | ||||||||
3407921-C-A | 3539880-C-A | ** | |||||||
10976288-C-A | ** | ||||||||
19532840-C-A | 17420960-C-A | ** | |||||||
5127215-C-A | 5259174-C-A | ** | |||||||
10683472-C-A | ** | ||||||||
10678994-TTCCACTCCAG-T | ** | ||||||||
11009408-C-A | ** | ||||||||
13927389-C-A | 11806683-C-A | ** | |||||||
5212083-C-A | 5344042-C-A | ** | |||||||
10790515-T-G | ** | ||||||||
10808591-C-T | ** | ||||||||
6435275-G-T | 6567234-G-T | ** | |||||||
10744578-T-TC | ** | ||||||||
10744571-CT-A | ** | ||||||||
10744556-A-T | ** | ||||||||
5720955-C-A | 5852914-C-A | ** | |||||||
3374282-G-T | 3506241-G-T | ** | |||||||
21949002-C-A | 19787116-C-A | ** | |||||||
56847514-T-C | ** | ||||||||
56827423-A-G | ** | ||||||||
13457748-T-A | 11302072-T-A | ** | |||||||
56752194-C-A | ** | ||||||||
10802581-C-A | ** | ||||||||
18948101-C-A | 16836221-C-A | ** | |||||||
2729830-C-T | 2861789-C-T | ** | |||||||
13899220-A-T | 11778514-A-T | ** | |||||||
24611460-GTGT-G | 22465313-GTGT-G | P3_t2 | ** | ||||||
16926811-C-A | 14814931-C-A | ** | |||||||
10845703-T-A | ** | ||||||||
19746883-TTGTG-T | 17635003-TTGTG-T | P5_Prx | 13×TG | ** | |||||
10744587-A-T | FT183022 | ** | |||||||
2928729-C-A | 3060688-C-A | ** | |||||||
10964769-TTCC-T | ** | ||||||||
10964768-A-G | FT438460 | ** | |||||||
10964763-AAT-A | ** | ||||||||
14366633-C-A | 12245928-C-A | ** | |||||||
28697981-C-A | 26551834-C-A | ** | |||||||
16479942-C-A | 14368062-C-A | ** | |||||||
10661122-C-A | ** | ||||||||
25970734-T-G | 23824587-T-G | P1_Y1 | 13×TC | ** | |||||
5459141-C-A | 5591100-C-A | ** | |||||||
16701919-C-A | 14590039-C-A | ** | |||||||
10934697-A-G | ** | ||||||||
28468875-A-C | 26322728-A-C | ** | |||||||
17210921-A-C | 15099041-A-C | ** | |||||||
17210915-A-C | 15099035-A-C | ** | |||||||
11028199-C-A | ** | ||||||||
26099732-A-T | 23953585-A-T | P1_Y1 | ** | ||||||
22624963-C-A | 20463077-C-A | ** | |||||||
10753926-G-T | ** | ||||||||
10797985-C-T | ** | ||||||||
22689998-C-A | 20528112-C-A | ** | |||||||
28762628-C-A | 26616481-C-A | ** | |||||||
15653584-C-A | 13541704-C-A | ** | |||||||
28497279-C-A | 26351132-C-A | ** | |||||||
7256047-AT-A | 7388006-AT-A | ** | |||||||
18682618-C-A | 16570738-C-A | ** | |||||||
27861932-C-A | 25715785-C-A | P1_Y2 | ** | ||||||
18185057-C-A | 16073177-C-A | FT227148 | ** | ||||||
7142286-C-A | 7274245-C-A | ** | |||||||
3818183-C-A | 3950142-C-A | ** | |||||||
23206705-C-A | 21044819-C-A | ** | |||||||
10954383-C-A | ** | ||||||||
13641174-C-A | 11485498-C-A | ** | |||||||
14517293-C-A | 12405494-C-A | ** | |||||||
21367316-C-A | 19205430-C-A | ** | |||||||
10796122-C-T | ** | ||||||||
14432130-C-A | 12311403-C-A | FTB80973 | ** | ||||||
9540269-C-A | 9702660-C-A | IR3_Prx | ** | ||||||
14537860-C-A | 12426061-C-A | ** | |||||||
17367770-C-A | 15255890-C-A | ** | |||||||
16424785-C-A | 14312905-C-A | ** | |||||||
8269815-C-A | 8401774-C-A | ** | |||||||
13462320-C-G | 11306644-C-G | ** | |||||||
28818167-A-T | 26672020-A-T | ** | |||||||
17367753-C-A | 15255873-C-A | ** | |||||||
7164172-C-A | 7296131-C-A | ** | |||||||
8978126-T-C | 9140517-T-C | ** | |||||||
16621486-A-G | 14509606-A-G | *** | |||||||
56833307-ATG-A,AAATTATT | *** | ||||||||
15070614-CAAAAAA-C | 12958705-CAAAAAA-C | 20×A | *** | ||||||
13716705-T-A | 11561029-T-A | *** | |||||||
58976635-C-T | 56830488-C-T | *** | |||||||
9195515-G-A | 9357906-G-A | *** | |||||||
9521418-A-G | 9683809-A-G | *** | |||||||
58976645-A-G | 56830498-A-G | *** | |||||||
6648660-C-A | 6780619-C-A | *** | |||||||
13489132-C-T | 11333456-C-T | *** | |||||||
23482894-CAAAA-C,CAAAAA | 21321008-CAAAA-C,CAAAAA | 15×A | *** | ||||||
5088451-CTTT-C | 5220410-CTTT-C | 27×T | *** | ||||||
28801400-G-T | 26655253-G-T | *** | |||||||
56829392-TTCCATTCGATTCCAT-T,TTCCATTCGATTGCAG | *** | ||||||||
21306622-G-T | 19144736-G-T | FGC43774 | *** | ||||||
28801388-A-T | 26655241-A-T | *** | |||||||
13449753-CAACCC-CCACCC,T | 11294077-CAACCC-CCACCC,T | *** | |||||||
58968852-C-A | 56822705-C-A | *** | |||||||
10763133-T-TTCTAC | *** | ||||||||
10752771-C-A | *** | ||||||||
10686583-A-T | *** | ||||||||
22703640-G-T | 20541754-G-T | *** | |||||||
19508177-CTTTT-C | 17396297-CTTTT-C | 19×T | *** | ||||||
15397116-G-C | 13285236-G-C | *** | |||||||
15608261-C-A | 13496381-C-A | *** | |||||||
15842709-T-G | 13730829-T-G | *** | |||||||
17551884-C-A | 15440004-C-A | *** | |||||||
15943877-C-A | 13831997-C-A | *** | |||||||
13461862-C-A | 11306186-C-A | *** | |||||||
14826548-G-GTT | 12714615-G-GTT | 19×T | *** | ||||||
16620062-C-T | 14508182-C-T | *** | |||||||
22703625-AG-T | 20541739-AG-T | *** | |||||||
21456093-C-A | 19294207-C-A | *** | |||||||
5426390-C-A | 5558349-C-A | 17×T | *** | ||||||
14538742-C-A | 12426943-C-A | *** | |||||||
11643722-T-A | *** | ||||||||
19505638-C-A | 17393758-C-A | *** | |||||||
56833160-CCATTG-C,CCACTG | *** | ||||||||
14943559-C-A | 12831633-C-A | *** | |||||||
10977087-C-G | *** | ||||||||
10746980-T-G | *** | ||||||||
20330319-G-T | 18168433-G-T | P5_Dst | *** | ||||||
21996348-G-T | 19834462-G-T | *** | |||||||
22253093-T-C | 20091207-T-C | DYZ19 | *** | ||||||
10866030-T-C | *** | ||||||||
18256090-G-T | 16144210-G-T | *** | |||||||
21220240-CTT-C,CT | 19058354-CTT-C,CT | 19×T | *** | ||||||
5785679-G-C | 5917638-G-C | BY50237 | *** | ||||||
11014442-C-A | *** | ||||||||
10657400-C-A | *** | ||||||||
18109390-G-T | 15997510-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 23018 | 9876038 | 8065342 | 7942299 |
Kit: 23018 | 14522184 | 9161727 | 8194587 |
Used in age calculations | 14522184 | 9161727 | 8194587 |
Counts of SNPs | 1 | 0 |
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