White

BigY2: 27045, BigY3: 27045
MDKA Birth: Ireland

Tree Position

R-P312/S116 > DF19/S232 > DF88 > FGC11833 > Z17110 > S4268 > Z17112 > S10067 > Z17119 > Z17121

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
27045		BigY3
27045
6262671-G-A 6394630-G-A IR3_Dst A*A*
18106074-G-C P5_Dst A*
20734017-C-T 18572131-C-T P4_Prx A*A*
11037143-C-T A*
13448746-C-CTCCCG 11293070-C-CTCCCG A*
23418833-G-C 21256947-G-C BY145166 YY++
19454799-T-G 17342919-T-G YY++
17915279-C-A 15803399-C-A YY++
13896495-C-T 11775789-C-T BY43301 Y++
5555250-A-T +
17757832-C-T 15645952-C-T BY117177 YY++
15030212-C-G 12918300-C-G BY99240 YY++
14570548-C-T 12458748-C-T BY96518 YY++
16058012-T-C 13946132-T-C BY105582 YY++
16133292-G-A 14021412-G-A BY211588 ++
2804381-GC-G +
4412439-AAAG-A +
5551743-AG-A +
21301186-C-A 19139300-C-A YY++
5585711-G-A +
8358032-T-A 8489991-T-A YY++
21290190-G-A 19128304-G-A BY131726 YY++
5650302-A-G +
13677467-CGGAATGGAAT-C 11521791-CGGAATGGAAT-C 6×GGAAT+*
7908946-C-G 8040905-C-G BY68666 YY++
7908979-C-T 8040938-C-T BY68668 YY++
17207589-G-A 15095709-G-A YY++
6072853-A-G +
5828445-C-T +
10931753-G-A +
8845350-A-C 8977309-A-C YY++
23437955-A-ATG 21276069-A-ATG 14×TG*
28808285-G-T 26662138-G-T **
13677477-T-C 11521801-T-C *
13480499-C-G 11324823-C-G **
14086003-T-A 11965297-T-A **
14124149-C-T 12003443-C-T **
14149197-A-T 12028491-A-T **
14354555-A-G 12233850-A-G **
13245287-C-A 11089611-C-A **
14424868-C-A 12304143-C-A **
12377123-G-T **
14516879-C-A 12405080-C-A **
14080293-G-A 11959587-G-A **
14043882-A-G 11923176-A-G **
13248510-C-T 11092834-C-T **
14079629-G-T 11958923-G-T **
14054960-G-T 11934254-G-T **
13977071-C-A 11856365-C-A **
13937416-T-C 11816710-T-C **
13927943-A-G 11807237-A-G **
11658801-G-T **
13659515-C-A 11503839-C-A **
13329205-C-A 11173529-C-A **
13642950-G-T 11487274-G-T **
13487868-T-G 11332192-T-G **
14517192-G-C 12405393-G-C **
24205969-T-G P1_Y1 **
14573029-C-A 12461229-C-A **
15527854-C-A 13415974-C-A **
16413679-T-G 14301799-T-G **
16261068-A-G 14149188-A-G **
16245938-T-A 14134058-T-A **
16232516-A-G 14120636-A-G **
16036270-T-C 13924390-T-C **
15988028-T-A 13876148-T-A **
15860282-T-A 13748402-T-A **
15823585-G-A 13711705-G-A **
15792623-C-T 13680743-C-T **
15758508-A-G 13646628-A-G **
15616754-C-A 13504874-C-A **
15579504-C-A 13467624-C-A **
15515307-G-A 13403427-G-A **
14845411-T-A 12733477-T-A **
15490574-G-T 13378694-G-T **
15447075-G-A 13335195-G-A **
15447047-C-A 13335167-C-A **
13238355-G-A 11082679-G-A **
15355333-AAACAAATGGT-A 13243452-AAACAAATGGT-A **
15347061-T-TC 13235180-T-TC **
15258569-C-A 13146653-C-A **
15126932-C-A 13015019-C-A **
15109890-A-C 12997977-A-C **
15104938-T-C 12993026-T-C **
15049814-A-G 12937905-A-G **
15038350-C-T 12926440-C-T **
14866206-G-C 12754276-G-C **
15402866-T-C 13290986-T-C **
10924205-C-A **
13194815-C-A 11039139-C-A **
9852830-C-A 10015221-C-A **
10763232-G-C **
10750427-C-A **
10750416-T-C **
10750410-C-T **
10676943-C-A **
10666819-C-A **
10659978-C-A **
10659645-A-T **
10651859-C-A **
10651802-C-A **
10625768-G-A **
9964282-G-A 10126673-G-A **
9920346-A-G 10082737-A-G **
9920340-A-T 10082731-A-T **
9826123-C-A 9988514-C-A **
10813581-C-A **
9577071-T-C 9739462-T-C IR3_Prx **
9438144-G-A 9600535-G-A **
9421236-T-A 9583627-T-A **
9414592-C-A 9576983-C-A **
9372477-T-G 9534868-T-G **
9094610-A-T 9257001-A-T **
9094300-T-C 9256691-T-C **
8981490-C-A 9143881-C-A **
8849984-C-G 8981943-C-G **
8014988-AT-A 8146947-AT-A **
7681809-C-A 7813768-C-A **
7662716-C-A 7794675-C-A **
7428442-A-T 7560401-A-T **
7413392-A-G 7545351-A-G **
10803109-T-C **
10826193-C-G **
11026193-A-G **
10893418-T-C **
11017459-C-A **
11014516-C-G **
10962904-A-G **
10954211-C-T **
10946175-A-G **
10931338-T-C **
10931318-A-C **
10930259-T-C **
16624172-C-T 14512292-C-T **
10907794-C-A **
10893459-A-T **
10893445-T-C **
10893440-T-C **
10893425-T-C **
10893398-CATTAA-C **
10826226-C-CACTCA **
10862922-C-A **
10826250-C-T **
10839285-T-G **
10845668-T-TTAAAC **
10845670-C-CG **
10845671-C-CGTTT **
10845685-C-CTAGTA **
10862966-C-A **
10893395-T-C **
10863010-T-C **
10883771-C-T **
10893375-T-C **
10893380-T-G **
10893389-A-G **
10893394-A-C **
16429029-A-T 14317149-A-T **
17605589-C-A 15493709-C-A **
16705530-A-C 14593650-A-C **
23495499-C-A 21333613-C-A **
26045981-G-T 23899834-G-T P1_Y1 **
25533087-G-T 23386940-G-T P1_gr1 **
25246475-T-TG 23100328-T-TG P2_r1 **
24885557-G-T 22739410-G-T g1 **
24573383-TG-T 22427236-TG-T P3_t2 **
24434631-T-C 22288484-T-C **
24424165-T-A 22278018-T-A **
24374791-G-T 22228644-G-T **
24291382-A-G 22145235-A-G P3_t1 **
24003000-A-T 21856853-A-T **
23991916-C-T 21845769-C-T **
23832995-G-T 21671109-G-T **
23697883-C-A 21535997-C-A **
23697739-G-T 21535853-G-T **
23475395-A-T 21313509-A-T **
26248368-TC-T 24102221-TC-T P1_Y1 **
23465108-T-C 21303222-T-C **
23420743-C-A 21258857-C-A **
23291293-G-A 21129407-G-A **
23126973-A-T 20965087-A-T **
23126235-T-C 20964349-T-C **
23059621-C-A 20897735-C-A **
22965872-G-A 20803986-G-A **
22916816-G-A 20754930-G-A **
22729590-T-A 20567704-T-A **
22712899-C-A 20551013-C-A **
22588013-G-A 20426127-G-A **
22548270-G-T 20386384-G-T **
22448727-C-A 20286841-C-A DYZ19 **
22154858-T-A 19992972-T-A **
26248311-C-A 24102164-C-A P1_Y1 **
26273273-A-C 24127126-A-C P1_Y1 **
21818865-TA-T 19656979-TA-T **
56849642-G-T **
23810533-G-T P1_Y1 **
21558926-T-A **
20117745-T-C DYZ19 **
17881046-G-T P5_Prx **
17482712-ATT-A P5_Prx 13×T**
17071959-T-G **
16208867-G-T P6_Prx **
12453991-A-G **
11343751-C-T **
9782460-C-T IR3_Prx **
19788321-C-A 17676441-C-A P5_Prx **
26352188-T-G 24206041-T-G P1_Y1 **
18316580-G-T 16204700-G-T P6_Prx **
56861844-G-A **
56832995-C-A **
26273295-T-C 24127148-T-C P1_Y1 **
28760670-C-A 26614523-C-A **
28716365-T-G 26570218-T-G **
28711404-G-T 26565257-G-T **
28674794-C-A 26528647-C-A **
28673183-C-A 26527036-C-A **
28620606-C-CA 26474459-C-CA **
28620606-C-G 26474459-C-G **
28609688-T-C 26463541-T-C **
28601880-G-A 26455733-G-A **
28438149-C-A 26292002-C-A P1_gr2 **
28069956-T-TTA 25923809-T-TTA P1_Y2 **
27699993-A-G 25553846-A-G P1_Y2 **
27484514-G-T 25338367-G-T P1_Y2 **
27297515-G-T 25151368-G-T P1_g3 **
21880951-G-C 19719065-G-C **
21634601-G-C 19472715-G-C **
16705540-G-C 14593660-G-C **
17923435-C-A 15811555-C-A **
18857047-C-G 16745167-C-G **
18855689-C-A 16743809-C-A **
18753461-G-A 16641581-G-A **
18736595-C-A 16624715-C-A **
18736244-C-A 16624364-C-A **
18736186-C-A 16624306-C-A **
18653600-ATT-A 16541720-ATT-A **
18480070-A-C 16368190-A-C P6_Dst **
18388328-A-T 16276448-A-T P6_Gap **
18388317-C-G 16276437-C-G P6_Gap **
18286516-A-C 16174636-A-C P6_Prx **
18271047-T-A 16159167-T-A **
18271042-T-G 16159162-T-G **
18127549-C-A 16015669-C-A **
17871977-G-A 15760097-G-A **
18890926-G-T 16779046-G-T **
17870984-T-C 15759104-T-C **
17812040-A-G 15700160-A-G **
17718471-C-T 15606591-C-T **
17715044-A-G 15603164-A-G **
17653940-C-G 15542060-C-G **
7305752-C-A 7437711-C-A **
17569211-C-G 15457331-C-G **
17569199-T-G 15457319-T-G **
17513956-A-G 15402076-A-G **
17481267-C-A 15369387-C-A **
17434098-A-G 15322218-A-G **
17058520-T-C 14946640-T-C **
16881430-C-A 14769550-C-A **
16827536-A-G 14715656-A-G **
18859127-C-A 16747247-C-A **
18890958-G-C 16779078-G-C **
21543460-T-A 19381574-T-A **
20280105-T-TTCCC 18118219-T-TTCCC P5_Dst **
21459894-A-G 19298008-A-G **
21408323-T-C 19246437-T-C **
21377236-G-T 19215350-G-T **
21367687-T-C 19205801-T-C **
21316895-G-A 19155009-G-A **
21152508-A-G 18990622-A-G **
21108014-G-C 18946128-G-C **
21037337-G-T 18875451-G-T **
21037257-G-T 18875371-G-T **
20936388-G-T 18774502-G-T P4_Dst **
20840520-A-T 18678634-A-T P4_Gap **
20825628-C-A 18663742-C-A P4_Gap **
20533431-A-G 18371545-A-G P5_Dst **
20506535-GGGAAAAAAAGA-G 18344649-GGGAAAAAAAGA-G P5_Dst **
20280103-C-T 18118217-C-T P5_Dst **
18895590-C-A 16783710-C-A **
19774141-G-C 17662261-G-C P5_Prx **
19774100-A-T 17662220-A-T P5_Prx **
19508248-A-G 17396368-A-G **
19506761-C-A 17394881-C-A **
19479345-CA-C 17367465-CA-C **
19361142-C-A 17249262-C-A **
19216291-G-A 17104411-G-A **
19130668-C-A 17018788-C-A **
18997126-C-A 16885246-C-A **
18993385-T-G 16881505-T-G **
18987186-G-C 16875306-G-C **
18966249-T-C 16854369-T-C **
18946987-C-A 16835107-C-A **
18943020-C-A 16831140-C-A **
7400961-T-C 7532920-T-C **
8761896-C-A 8893855-C-A **
7303691-G-T 7435650-G-T **
17576149-A-G 15464269-A-G **
9920298-C-T 10082689-C-T **
9920319-C-G 10082710-C-G **
17569224-C-A 15457344-C-A **
11003698-C-CGTTCT **
2790296-A-G 2922255-A-G **
18707197-C-A 16595317-C-A **
17808152-C-A 15696272-C-A **
9920279-C-T 10082670-C-T Z22418 **
16827526-T-G 14715646-T-G **
27232179-C-CTTTT 25086032-C-CTTTT P1_g3 **
17569208-C-A 15457328-C-A **
25246479-T-TG 23100332-T-TG P2_r1 **
8792962-C-A 8924921-C-A **
9920271-A-T 10082662-A-T **
9920295-A-G 10082686-A-G **
9920276-C-G 10082667-C-G **
14910797-A-G 12798864-A-G **
11020457-C-T **
24250598-A-T 22104451-A-T P3_b1 **
22997049-C-A 20835163-C-A **
14730197-AAATACTAATACT-A 12618265-AAATACTAATACT-A 8×AATACT**
17885894-G-T 15774014-G-T **
3165037-A-T 3296996-A-T A3159 **
4960466-C-G 5092425-C-G **
10826190-C-G **
9920260-G-T 10082651-G-T **
10826235-C-T **
10826249-T-A **
23420574-C-A 21258688-C-A **
15503403-C-A 13391523-C-A **
22215259-T-C 20053373-T-C **
28776109-C-A 26629962-C-A **
14379385-A-G 12258681-A-G **
5292107-C-A 5424066-C-A **
56839141-G-T **
7704707-C-A 7836666-C-A **
28772178-C-A 26626031-C-A **
7640961-C-A 7772920-C-A **
19732421-C-CA 17620541-C-CA P5_Prx **
14688747-C-A 12576813-C-A **
14051677-C-A 11930971-C-A **
20470082-G-T 18308196-G-T P5_Dst **
7664796-C-A 7796755-C-A **
7285104-T-C 7417063-T-C **
10992361-A-T **
2696463-C-A 2828422-C-A **
16705014-G-T 14593134-G-T **
21244162-C-A 19082276-C-A **
13298594-C-A 11142918-C-A **
10751068-C-T FGC80502 **
10836503-C-T **
13315656-C-A 11159980-C-A **
24878283-C-A 22732136-C-A g1 **
16309046-C-A 14197166-C-A **
23633409-C-T 21471523-C-T **
10826168-T-C **
3990662-CT-C 4122621-CT-C **
7180116-C-A 7312075-C-A **
10893355-T-C **
14901425-C-A 12789492-C-A **
16364038-A-T 14252158-A-T **
18685413-C-A 16573533-C-A **
22316232-C-A 20154346-C-A DYZ19 **
3276035-C-A 3407994-C-A **
19811649-CAAAA-C 17699769-CAAAA-C P5_Prx 22×A**
17859835-C-A 15747955-C-A **
10646722-C-A **
9522543-C-A 9684934-C-A **
6886763-C-A 7018722-C-A **
13475744-T-A 11320068-T-A **
9438140-C-T 9600531-C-T **
22128639-C-A 19966753-C-A **
13316152-C-A 11160476-C-A **
15776004-G-T 13664124-G-T **
16729986-C-A 14618106-C-A **
7142834-C-A 7274793-C-A **
10770907-C-A **
10845676-C-A **
4568303-G-T 4700262-G-T **
10893377-G-C **
9040329-C-A 9202720-C-A **
14698329-C-A 12586395-C-A **
10785335-C-T **
16151806-AT-A 14039926-AT-A P8_Dst **
3165043-A-T 3297002-A-T **
11026292-T-G **
18328814-T-G 16216934-T-G P6_Prx **
13229909-C-A 11074233-C-A **
5231242-C-T 5363201-C-T **
10759773-TC-T **
10826185-A-G **
19811649-C-A 17699769-C-A P5_Prx 22×A**
13217983-G-A 11062307-G-A **
17497043-G-A 15385163-G-A FT313077 **
15865572-C-TT 13753692-C-TT **
9920264-C-A 10082655-C-A Z4879 **
23373117-C-A 21211231-C-A **
22123036-C-A 19961150-C-A **
10893436-T-C **
10946153-G-T **
28657652-C-A 26511505-C-A **
18625470-G-T 16513590-G-T **
7138391-C-A 7270350-C-A **
15866124-T-A 13754244-T-A **
7195223-G-C 7327182-G-C FT107333 **
10795809-G-T **
7374407-C-A 7506366-C-A **
7756864-C-A 7888823-C-A **
7829010-C-A 7960969-C-A **
7313665-C-A 7445624-C-A **
14556478-C-A 12444679-C-A **
56844852-G-T **
13485643-G-C 11329967-G-C **
27864408-A-T 25718261-A-T P1_Y2 **
19189470-C-T 17077590-C-T **
17568449-C-A 15456569-C-A **
3641222-C-A 3773181-C-A **
10986841-C-A BY29411 **
6816750-T-A 6948709-T-A **
9735666-G-T 9898057-G-T IR3_Prx **
18628281-C-A 16516401-C-A **
17201753-A-T 15089873-A-T **
21902049-C-A 19740163-C-A **
7289519-G-T 7421478-G-T **
14561910-C-A 12450111-C-A **
15364045-G-A 13252165-G-A **
15347098-C-A 13235217-C-A **
14661457-C-A 12549522-C-A **
11643699-G-C **
18042924-C-A 15931044-C-A **
10862779-C-A **
19351413-C-A 17239533-C-A **
3250813-C-A 3382772-C-A **
13234369-C-A 11078693-C-A **
28468703-C-A 26322556-C-A **
5220991-C-A 5352950-C-A **
15770173-C-A 13658293-C-A **
24671142-CAAA-C 22524995-CAAA-C P3_b2 14×A**
16897630-C-A 14785750-C-A **
17774974-G-T 15663094-G-T **
6992587-G-T 7124546-G-T **
14100400-C-A 11979694-C-A **
7142862-C-A 7274821-C-A **
28605867-C-A 26459720-C-A **
15364039-G-C 13252159-G-C **
3345816-T-G 3477775-T-G **
4087531-C-A 4219490-C-A **
4070259-C-A 4202218-C-A **
4069583-T-A 4201542-T-A **
4063158-C-A 4195117-C-A **
6957579-C-T 7089538-C-T FT178822 **
3922858-C-A 4054817-C-A **
3898959-G-T 4030918-G-T **
3898926-G-T 4030885-G-T **
27699978-C-T 25553831-C-T P1_Y2 **
3848617-A-G 3980576-A-G **
3610185-G-A 3742144-G-A **
3424986-G-T 3556945-G-T **
3346369-C-A 3478328-C-A **
3285910-T-A 3417869-T-A **
4110890-C-A 4242849-C-A **
3285081-G-A 3417040-G-A **
3116391-T-C 3248350-T-C **
3016646-C-A 3148605-C-A **
2909262-A-G 3041221-A-G **
2854912-T-C 2986871-T-C **
2738916-C-A 2870875-C-A **
6992596-A-C 7124555-A-C **
2690789-C-A 2822748-C-A **
7038604-A-G 7170563-A-G **
2652005-G-C 2783964-G-C **
2649646-C-A 2781605-C-A **
6589184-C-A 6721143-C-A **
18753026-G-A 16641146-G-A **
5449432-G-T 5581391-G-T **
4103872-T-C 4235831-T-C **
6922885-G-C 7054844-G-C **
7200048-C-A 7332007-C-A **
5830484-C-A 5962443-C-A **
6582361-C-T 6714320-C-T **
6654194-T-A 6786153-T-A **
6354371-C-A 6486330-C-A **
6312786-T-A 6444745-T-A IR3_Dst **
6293196-G-T 6425155-G-T IR3_Dst **
5999512-A-G 6131471-A-G **
5987903-G-T 6119862-G-T **
5921865-T-C 6053824-T-C **
5888377-T-C 6020336-T-C **
5870128-C-A 6002087-C-A **
6828474-G-A 6960433-G-A **
6875597-C-A 7007556-C-A **
5858989-C-A 5990948-C-A **
5764522-A-T 5896481-A-T **
4374287-G-A 4506246-G-A **
5710020-A-G 5841979-A-G **
5444138-G-T 5576097-G-T **
5345737-T-C 5477696-T-C **
5187080-C-A 5319039-C-A **
4959863-C-T 5091822-C-T **
4950956-T-A 5082915-T-A **
4900201-A-G 5032160-A-G **
4740885-G-A 4872844-G-A **
4633371-C-A 4765330-C-A **
4630717-A-C 4762676-A-C **
4630653-T-G 4762612-T-G **
4460930-C-A 4592889-C-A **
4432681-C-A 4564640-C-A **
6921838-C-A 7053797-C-A **
21042988-C-A 18881102-C-A **
6646934-A-G 6778893-A-G **
14470592-G-T 12349861-G-T **
7255166-CT-C 7387125-CT-C **
18480060-AGGT-A 16368180-AGGT-A P6_Dst **
15866118-C-A 13754238-C-A **
7111783-C-A 7243742-C-A **
15581123-G-T 13469243-G-T **
14284954-C-A 12164248-C-A **
9892638-C-A 10055029-C-A **
7423902-C-A 7555861-C-A **
21818903-C-A 19657017-C-A **
14562697-C-A 12450897-C-A **
15323529-C-A 13211647-C-A **
14557967-C-A 12446168-C-A **
7202333-T-C 7334292-T-C **
7088572-C-A 7220531-C-A **
19673884-T-G 17562004-T-G P5_Prx **
7256969-A-T 7388928-A-T **
17243835-G-T 15131955-G-T **
7430687-C-A 7562646-C-A **
28462820-G-T 26316673-G-T **
21616045-C-A 19454159-C-A **
22782106-C-A 20620220-C-A **
24264289-T-TG 22118142-T-TG P3_b1 **
17406819-C-A 15294939-C-A **
22979339-C-A 20817453-C-A **
28777867-C-A 26631720-C-A **
7269774-C-A 7401733-C-A **
7257060-A-T 7389019-A-T **
7269411-C-G 7401370-C-G **
21482762-CTTTTTTTT-C 19320876-CTTTTTTTT-C 19×T**
16876970-C-A 14765090-C-A **
16490820-C-A 14378940-C-A **
14041645-A-G 11920939-A-G **
17918769-A-G 15806889-A-G **
23252710-T-C 21090824-T-C **
15656718-C-A 13544838-C-A **
7615169-C-A 7747128-C-A **
16312400-C-A 14200520-C-A **
14432410-C-A 12311683-C-A **
9403260-C-A 9565651-C-A **
7183147-C-A 7315106-C-A **
4388094-C-A 4520053-C-A **
9111246-G-T **
7167682-T-G 7299641-T-G **
24841398-C-G 22695251-C-G IR1_R **
22489659-T-A 20327773-T-A DYZ19 **
7926061-C-G 8058020-C-G ***
7942553-G-T 8074512-G-T ***
23482894-CAAAA-C,CAAA 21321008-CAAAA-C,CAAA 15×A***
7926057-A-C 8058016-A-C ***
14934795-TTTTG-T 12822860-TTTTG-T 6×TTTG***
21439079-T-C ***
6664337-G-T 6796296-G-T ***
7970491-C-A 8102450-C-A ***
14938287-C-A 12826362-C-A ***
16749725-GTT-G,GT 14637845-GTT-G,GT 16×T***
8974721-T-C 9137112-T-C ***
7881130-C-A 8013089-C-A ***
7926055-C-G 8058014-C-G ***
56734784-A-G ***
11359216-TGA-T,TGG ***
17146550-CAA-C,CA 15034670-CAA-C,CA 12×A***
10789284-C-A ***
12559458-C-T ***
12581820-C-A ***
14747376-CA-C 12635445-CA-C 9×A***
8877323-G-A 9009282-G-A ***
10934798-GG-G,GA ***
13893995-G-T ***
8761342-C-A 8893301-C-A ***
14363444-CG-C,CGG 11×G***
7773683-A-G 7905642-A-G ***
8753700-G-T 8885659-G-T ***
7760055-C-A 7892014-C-A ***
21146257-C-T 18984371-C-T ***
17332737-G-A 15220857-G-A ***
18853616-C-A 16741736-C-A ***
17169973-C-A 15058093-C-A ***
16428250-C-A 14316370-C-A ***
8702804-A-T 8834763-A-T ***
6664342-G-T 6796301-G-T ***
13447102-C-A 11291426-C-A ***
14281842-C-A 12161136-C-A ***
18191234-T-C 16079354-T-C ***
18088981-T-C 15977101-T-C ***
18072902-C-A 15961022-C-A ***
14550290-C-A 12438491-C-A ***
10764542-GCCATTTTCACTCCATT-G,GCCATTTTACTCCATT ***
27618262-C-A 25472115-C-A P1_Y2 ***
18848531-C-G 16736651-C-G ***
4618583-C-T 4750542-C-T ***
17169794-C-T 15057914-C-T ***
16967402-C-A 14855522-C-A ***
15221623-C-A 13109709-C-A ***
15276872-C-T 13164961-C-T ***
16290479-C-A 14178599-C-A ***
16280928-T-C 14169048-T-C ***
15742016-G-T 13630136-G-T ***
15864134-C-A 13752254-C-A ***
14032963-C-T 11912257-C-T ***
13468322-C-G 11312646-C-G ***
9522154-C-A 9684545-C-A ***
21237834-C-A 19075948-C-A ***
9907688-G-T 10070079-G-T ***
6205504-T-C 6337463-T-C IR3_Dst ***
10659183-TC-T ***
5864484-C-A 5996443-C-A ***
5800202-T-C 5932161-T-C ***
10999851-T-C ***
56828406-G-T ***
22522444-C-T 20360558-C-T ***
21495343-AC-A,AAC 19333457-AC-A,AAC ***
21189939-C-A 19028053-C-A ***
18892596-C-A 16780716-C-A ***
14992964-C-A 12881049-C-A ***
9398236-C-A 9560627-C-A ***
2728213-G-T 2860172-G-T ***
10968470-T-C ***
3274403-C-A 3406362-C-A ***
10965536-C-CTCCAA ***
19402803-C-A 17290923-C-A ***
19271259-C-A 17159379-C-A ***
13722702-C-A 11567026-C-A ***
14286775-G-A 12166069-G-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 27045940997076826707602633
Kit: 270451483489893123458301078
Used in age calculations1483489893123458301078
Counts of SNPs1514
Variant counts last updated 2020-08-04 02:49:23.


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