Adams

BigY3: 545516, BigY2: 545516
MDKA Birth: England

Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > Z2534 > ZZ5 > Z2185 > BY44331 > Z2186 > L1066 > PR4692 > Y62300

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY3
545516		BigY2
545516
27543355-C-A 25397208-C-A P1_Y2 A+
13688170-T-A 11532494-T-A A*
19727980-T-C 17616100-T-C P5_Prx A*
23716415-T-G 21554529-T-G A*A*
28817176-G-A 26671029-G-A A*A*
13453835-T-C 11298159-T-C A*
13478065-C-T 11322389-C-T A*
13489926-C-G 11334250-C-G A*
3293425-T-C 3425384-T-C A*
26395349-C-T 24249202-C-T P1_Y1 A*
6338836-A-T 6470795-A-T IR3_Dst A*
6102043-C-G 6234002-C-G A*
4318128-G-A 4450087-G-A A*
25567028-G-A 23420881-G-A P1_gr1 A*
25581192-A-T 23435045-A-T P1_gr1 A*
26401813-G-C 24255666-G-C P1_Y1 A*
26028192-G-A 23882045-G-A P1_Y1 A*
23017609-A-G 20855723-A-G FT62197 Y+
3186946-G-T 3318905-G-T FT60541 +
3779882-T-A 3911841-T-A FT60639 +
3734159-T-C 3866118-T-C FT60629 +
3534007-G-T 3665966-G-T FT60594 +
21443359-T-A 19281473-T-A FT62072 YY+**
17970868-C-T 15858988-C-T CTS8386 YY++
13221449-A-G 11065773-A-G BY84610 ++
28695822-G-T 26549675-G-T FT62325 +
7269088-G-A 7401047-G-A BY64280 YY++
9380449-G-C 9542840-G-C FT79012 Y+**
21203563-T-C 19041677-T-C BY131072 YY++
3812612-G-A 3944571-G-A FT60643 +
28548895-G-A 26402748-G-A FT62300 +
5292635-C-T 5424594-C-T FT110438 +**
15906505-C-G 13794625-C-G FT61593 YY+**
4712917-T-C 4844876-T-C FT60770 +
5288166-A-C 5420125-A-C FT60848 +
5449237-T-C 5581196-T-C FT60866 +
4696255-A-G 4828214-A-G FT60764 +
17731183-A-G 15619303-A-G FT61805 Y+
17373240-A-T 15261360-A-T FT61765 Y+
19997562-ATGTG-A 17885682-ATGTG-A P5_Prx 17×TG***
56855859-T-C *
13448608-CCACTT-C 11292932-CCACTT-C **
3860598-G-A 3992557-G-A *
56869761-A-T *
10824998-C-A **
10908060-G-A **
10787073-CG-C **
10908080-A-T **
10787076-C-A **
10908076-T-A **
10908074-T-C **
10908072-G-A **
10787078-T-TCA **
14769295-C-A 12657364-C-A **
14827292-C-A 12715359-C-A **
10895693-T-C **
10828541-A-C **
10893096-A-T **
10866179-C-T **
10836263-C-T **
10787137-C-G **
10828583-T-TTACAC **
10802291-C-T **
10947086-ATTCTT-A **
10828544-A-T **
10807384-C-A **
10814874-C-A **
10914559-C-A **
14386769-G-T 12266065-G-T **
10952565-CATTCG-C **
14605824-T-G 12494026-T-G **
14600036-C-A 12488236-C-A **
14376206-C-A 12255502-C-A **
14368764-C-A 12248060-C-A **
14299794-C-A 12179088-C-A **
14267479-C-A 12146773-C-A **
14266686-C-A 12145980-C-A **
13921481-C-A 11800775-C-A **
13912034-C-A 11791328-C-A **
11646472-TGAATG-T **
13739972-G-T 11584296-G-T **
14853002-C-A 12741068-C-A **
13471142-C-A 11315466-C-A **
13468997-G-C 11313321-G-C **
10965052-C-A **
13460319-GC-G 11304643-GC-G **
13237418-C-A 11081742-C-A **
14858556-CTTGCTT-C 12746622-CTTGCTT-C **
14821010-C-A 12709077-C-A **
14614506-C-A 12502704-C-A **
11031857-A-C **
11031839-T-G **
11022033-C-G **
11011675-C-A **
11010110-C-A **
10969028-T-A **
10967461-C-A **
11009400-A-G **
9768371-G-GA 9930762-G-GA **
10787072-A-AAATT **
6919921-C-A 7051880-C-A **
7228363-G-T 7360322-G-T **
7209124-G-A 7341083-G-A **
7189956-A-G 7321915-A-G **
7182369-C-A 7314328-C-A **
7142717-T-G 7274676-T-G **
7082638-C-A 7214597-C-A **
7052360-G-T 7184319-G-T **
6992714-G-A 7124673-G-A FT209035 **
6992710-A-T 7124669-A-T **
6988443-C-A 7120402-C-A **
6979657-G-T 7111616-G-T **
6916458-C-A 7048417-C-A **
7289530-C-A 7421489-C-A **
6767674-G-T 6899633-G-T **
6654865-CA-C 6786824-CA-C **
6458225-C-A 6590184-C-A **
5633804-G-GA 5765763-G-GA 9×A**
5412295-G-A 5544254-G-A **
5157631-C-A 5289590-C-A **
5062130-C-A 5194089-C-A **
4756358-C-A 4888317-C-A **
4578760-C-A 4710719-C-A **
4417299-C-A 4549258-C-A **
4382231-C-A 4514190-C-A **
4371805-T-A 4503764-T-A **
7238791-C-A 7370750-C-A **
7334157-AT-A 7466116-AT-A **
10787065-C-A **
9864526-G-T 10026917-G-T **
10785259-G-GCCA **
10785253-CATT-C **
10779951-C-A **
10765947-C-A **
10765518-C-A **
10754998-ATTCTATTCAATTTCG-A **
10749993-T-G **
10662925-C-T **
10654548-C-A **
10652562-C-A **
10022195-G-C 10184586-G-C **
9993322-C-T 10155713-C-T **
15288130-G-A 13176229-G-A **
7413368-C-A 7545327-C-A **
9415859-C-A 9578250-C-A **
9030493-G-T 9192884-G-T **
9109618-G-T **
8788786-G-T 8920745-G-T **
8575954-G-T 8707913-G-T **
8350205-T-C 8482164-T-C **
7947104-G-A 8079063-G-A **
7938916-G-C 8070875-G-C **
7869653-A-T 8001612-A-T **
7672775-C-A 7804734-C-A **
7669277-G-A 7801236-G-A **
7541249-G-T 7673208-G-T **
14923881-C-A 12811946-C-A **
16514637-C-A 14402757-C-A **
15352859-C-A 13240978-C-A FGC78362 **
22965888-C-A 20804002-C-A **
24359628-T-A 22213481-T-A **
23841433-C-A 21679547-C-A **
23818125-C-T 21656239-C-T **
23597639-CA-C 21435753-CA-C **
23591008-C-T 21429122-C-T **
23590982-G-A 21429096-G-A **
23570304-G-A 21408418-G-A **
23523524-G-T 21361638-G-T **
23509147-G-A 21347261-G-A **
23392194-C-A 21230308-C-A **
23204288-C-A 21042402-C-A BY143799 **
23002785-A-T 20840899-A-T **
22904349-C-A 20742463-C-A **
27997736-C-A 25851589-C-A P1_Y2 **
22893524-G-T 20731638-G-T **
22893519-G-C 20731633-G-C **
22893511-GC-G 20731625-GC-G **
22893508-T-C 20731622-T-C **
22893506-C-T 20731620-C-T BZ2021 **
22893502-C-T 20731616-C-T **
22893501-A-T 20731615-A-T **
22802342-C-A 20640456-C-A **
22774572-C-A 20612686-C-A **
22605200-T-A 20443314-T-A **
22520497-T-G 20358611-T-G **
22133073-G-C 19971187-G-C FGC60737 **
27435933-C-A 25289786-C-A P1_Y2 **
28699192-C-A 26553045-C-A **
21902756-G-A 19740870-G-A **
13455824-C-T 11300148-C-T **
28458394-C-T 26312247-C-T **
26101386-C-A 23955239-C-A P1_Y1 **
24302814-GAC-G 22156667-GAC-G P3_t1 **
21418948-A-G 19257062-A-G **
19787766-C-A 17675886-C-A P5_Prx **
12372647-T-A **
14080037-T-G 11959331-T-G **
13632807-C-G 11477131-C-G **
13455740-A-T 11300064-A-T **
8091013-A-G 8222972-A-G **
4636058-C-T 4768017-C-T **
3125156-C-T 3257115-C-T **
13455819-C-A 11300143-C-A **
56674528-A-T **
13455787-T-C 11300111-T-C **
13455786-G-C 11300110-G-C **
13455796-T-A 11300120-T-A **
19640807-G-T 17528927-G-T P5_Prx **
18980302-T-C 16868422-T-C **
13484163-G-C 11328487-G-C **
13455781-T-A 11300105-T-A **
24577878-CAAA-C 22431731-CAAA-C P3_t2 25×A**
13455766-T-C 11300090-T-C **
13455747-T-A 11300071-T-A **
3663242-TATATACAC-T 3795201-TATATACAC-T 5×ATATACAC**
19755028-C-A 17643148-C-A P5_Prx **
56859071-A-G **
21989834-C-A 19827948-C-A **
21890423-T-G 19728537-T-G **
15362063-C-A 13250183-C-A **
16508789-C-A 14396909-C-A **
17216000-T-A 15104120-T-A **
17201747-G-A 15089867-G-A **
17188190-C-A 15076310-C-A **
17187529-GC-G 15075649-GC-G **
17118574-C-A 15006694-C-A **
17101588-C-A 14989708-C-A **
17096675-C-A 14984795-C-A **
16952984-C-T 14841104-C-T **
16939825-G-T 14827945-G-T **
16766403-C-A 14654523-C-A **
16618993-G-T 14507113-G-T **
3996368-G-T 4128327-G-T **
16432799-G-T 14320919-G-T **
17283163-T-C 15171283-T-C **
16387968-C-A 14276088-C-A **
16357131-G-T 14245251-G-T **
16060025-C-A 13948145-C-A **
15931498-C-A 13819618-C-A **
15916483-C-A 13804603-C-A **
15888167-C-A 13776287-C-A **
15743616-A-T 13631736-A-T **
15722645-G-T 13610765-G-T **
15587681-C-A 13475801-C-A **
15569189-C-A 13457309-C-A **
15500679-C-A 13388799-C-A **
15493181-C-A 13381301-C-A **
15412741-C-A 13300861-C-A **
17243846-T-G 15131966-T-G **
17285258-C-A 15173378-C-A **
21853677-CAAAAAAAAAAAAAAAAAAAAAAAA-C 19691791-CAAAAAAAAAAAAAAAAAAAAAAAA-C 43×A****
19240195-C-T 17128315-C-T **
21761181-C-A 19599295-C-A **
21455365-C-A 19293479-C-A **
21357547-T-C 19195661-T-C **
21357545-G-A 19195659-G-A **
21209016-C-A 19047130-C-A **
21139285-T-G 18977399-T-G **
21119042-A-G 18957156-A-G **
20984857-C-A 18822971-C-A P4_Dst **
20946291-G-T 18784405-G-T P4_Dst **
20473623-GAT-G 18311737-GAT-G P5_Dst **
19358716-T-C 17246836-T-C **
19337419-C-A 17225539-C-A **
19134462-AAAT-A 17022582-AAAT-A 5×AAT**
17445556-C-A 15333676-C-A **
18972871-G-T 16860991-G-T **
18777416-T-G 16665536-T-G **
18731518-C-A 16619638-C-A **
18631774-T-G 16519894-T-G **
18573429-C-A 16461549-C-A **
18565060-TCAAAA-T 16453180-TCAAAA-T **
18086482-C-A 15974602-C-A **
18086364-C-T 15974484-C-T **
17939964-C-A 15828084-C-A **
17930881-G-T 15819001-G-T **
17794297-T-C 15682417-T-C **
17794292-C-T 15682412-C-T **
17503895-A-T 15392015-A-T **
4234530-A-G 4366489-A-G **
14062045-T-A 11941339-T-A **
3818509-T-G 3950468-T-G **
14312287-C-A 12191581-C-A **
10759943-CGCA-C **
10856720-C-A **
10770600-C-T **
10969252-A-T **
25955946-G-T 23809799-G-T P1_Y1 **
9730648-C-A 9893039-C-A IR3_Prx **
24384931-G-T 22238784-G-T **
11028206-A-T **
10770616-T-A **
10651600-T-C **
6944062-T-C 7076021-T-C **
6944052-T-C 7076011-T-C **
6944045-G-C 7076004-G-C **
10655268-C-A **
17103727-C-A 14991847-C-A **
10750003-A-C **
10795144-C-A **
10988597-TTCCAC-T **
16424316-G-T 14312436-G-T **
10989449-C-A **
10925947-A-G **
10925930-C-T **
10925920-C-T **
20252843-C-A 18090957-C-A P5_Dst **
15490376-C-A 13378496-C-A **
10845950-G-T **
10887378-C-T **
10887375-T-C **
14263297-C-A 12142591-C-A **
15576996-C-A 13465116-C-A **
10912209-C-T **
11004405-C-CTTTTG **
10999966-C-T **
7162952-C-A 7294911-C-A **
15160759-C-A 13048845-C-A **
18775701-C-A 16663821-C-A **
13898781-G-TT 11778075-G-TT **
10940943-T-C **
10660869-C-A **
13484162-T-G 11328486-T-G **
14562700-CA-C 12450900-CA-C **
10856721-C-G **
10746489-G-T **
10691367-C-T **
11004413-T-G **
22549933-CA-C 20388047-CA-C 10×A**
6106061-C-CAA 6238020-C-CAA 20×A**
11004397-T-A **
28791282-G-A 26645135-G-A **
10969267-A-ATTCCACTGATTTGCG **
11028204-C-A **
3816094-T-A 3948053-T-A **
17503936-C-G 15392056-C-G **
18921630-C-A 16809750-C-A **
10940986-T-C **
10940933-C-T **
18263606-C-A 16151726-C-A **
13226814-C-A 11071138-C-A **
23591011-G-A 21429125-G-A **
10912225-G-A **
10912214-C-A **
11037194-A-T **
10912200-C-T **
6995127-C-A 7127086-C-A 13×A**
15779915-C-A 13668035-C-A **
10942904-C-T **
10942899-C-T **
10942892-C-A **
10942884-T-C **
10982209-C-T **
17385421-CAA-C 15273541-CAA-C 15×A**
58983538-T-C 56837391-T-C **
19377072-C-A 17265192-C-A **
58916353-T-A 56674518-A-T **
22893523-A-G 20731637-A-G **
13474363-C-A 11318687-C-A **
3548670-ATT-A 3680629-ATT-A 17×T**
25885856-G-GA 23739709-G-GA P1_Y1 **
10796188-A-G **
22868272-C-A 20706386-C-A **
22312856-T-A 20150970-T-A DYZ19 **
13496541-C-G 11340865-C-G **
9930046-G-A 10092437-G-A **
23412122-T-C 21250236-T-C Y14409 FGC30638 **
22484031-G-T 20322145-G-T DYZ19 **
18897846-A-T 16785966-A-T **
18897845-A-T 16785965-A-T **
24290749-G-GCA 22144602-G-GCA P3_t1 20×CA**
5962109-C-CAT 6094068-C-CAT 20×AT**
13484171-C-A 11328495-C-A BY86133 **
13455776-G-T 11300100-G-T **
15887989-C-A 13776109-C-A CTS4885 Z8152 **
10796170-T-C **
21544870-C-A 19382984-C-A **
16559994-C-A 14448114-C-A **
10769626-A-AC **
10860033-A-C **
10827915-C-T **
14735272-C-A 12623340-C-A **
14488607-TA-T 12367876-TA-T 8×A**
21677152-T-G 19515266-T-G **
11021309-T-A **
23393184-C-A 21231298-C-A **
10981568-T-G **
26415676-C-CAA 24269529-C-CAA P1_Y1 20×A**
10769681-A-T **
10769649-CT-C **
10769639-C-A **
10769629-CA-C **
11024710-T-C **
15406928-G-T 13295048-G-T **
10686392-C-A **
23590999-C-T 21429113-C-T BY146552 **
23590979-A-C 21429093-A-C **
10985246-TTACAC-T **
10985212-T-G **
23007021-T-C 20845135-T-C **
11659016-C-A **
28698602-C-A 26552455-C-A **
11024739-G-C **
10912236-T-A **
10950421-CCAGT-C **
10950418-AG-A **
18328807-G-T 16216927-G-T P6_Prx **
15677933-C-A 13566053-C-A 21×A**
56850353-A-C **
16260950-C-A 14149070-C-A **
7199265-A-T 7331224-A-T **
13460339-C-G 11304663-C-G **
13809446-C-A 11688740-C-A **
21230036-C-A 19068150-C-A **
22868274-G-T 20706388-G-T **
21323326-C-A 19161440-C-A **
18338326-G-GTA 16226446-G-GTA P6_Prx **
10012821-C-A 10175212-C-A **
2795600-C-A 2927559-C-A **
22788554-C-A 20626668-C-A **
11650160-C-A **
21738844-C-A 19576958-C-A **
15964623-G-T 13852743-G-T **
9044120-C-A 9206511-C-A **
13469034-G-T 11313358-G-T **
15431637-C-A 13319757-C-A **
18911075-C-A 16799195-C-A **
15620064-C-A 13508184-C-A **
8848483-C-A 8980442-C-A **
27943975-CA-C 25797828-CA-C P1_Y2 **
21219653-C-A 19057767-C-A **
10770619-A-T **
10793794-T-C **
15252853-G-T 13140939-G-T **
18443454-G-T 16331574-G-T P6_Dst 11×A**
6905509-C-A 7037468-C-A PH294 **
18736704-C-A 16624824-C-A **
18125514-C-A 16013634-C-A **
5620968-C-A 5752927-C-A **
21890427-A-G 19728541-A-G **
6780869-TC-T 6912828-TC-T **
3478283-G-T 3610242-G-T **
3431669-C-A 3563628-C-A **
3184601-G-T 3316560-G-T **
3057188-AGG-A 3189147-AGG-A **
3033632-C-A 3165591-C-A **
2690775-A-G 2822734-A-G **
2690770-T-C 2822729-T-C **
2690767-A-T 2822726-A-T **
2669090-TCAAAAAAATATATATATA-T 2801049-TCAAAAAAATATATATATA-T **
10908088-A-G **
13239876-G-T 11084200-G-T **
13195978-C-A 11040302-C-A **
10954266-C-A **
18709676-C-A 16597796-C-A **
10828573-T-A **
22490517-C-A 20328631-C-A DYZ19 **
7633276-C-A 7765235-C-A **
9959268-G-T 10121659-G-T **
28610105-C-A 26463958-C-A **
15400153-G-T 13288273-G-T **
10799860-C-A **
10755442-C-T **
10755436-C-G **
10691480-G-T **
10691454-G-A **
18717819-C-A 16605939-C-A **
16432786-G-C 14320906-G-C **
15332729-C-A 13220847-C-A **
10022205-C-G 10184596-C-G **
15406935-G-T 13295055-G-T **
10825661-C-A **
15739709-C-A 13627829-C-A **
10778311-C-CGAGTA **
10669560-T-A **
10669564-T-C **
10669565-A-T **
14324922-A-T 12204216-A-T **
10787086-T-C **
16297362-C-A 14185482-C-A **
10656394-C-A **
15940302-G-T 13828422-G-T **
7092487-C-A 7224446-C-A **
10973628-G-T **
18743352-C-A 16631472-C-A **
18731577-C-A 16619697-C-A ***
10994100-A-C,T ***
15402240-C-A 13290360-C-A ***
13690165-G-A 11534489-G-A ***
11009241-C-A ***
20802636-G-A 18640750-G-A P4_Gap ***
56750002-A-T ***
13690157-A-C 11534481-A-C ***
2775124-AT-A,ATTT 2907083-AT-A,ATTT 14×T***
13479159-C-A 11323483-C-A ***
3051562-C-A 3183521-C-A ***
19032673-TA-T 16920793-TA-T 10×A***
24890717-CT-C 22744570-CT-C g1 10×T***
13460445-G-A 11304769-G-A ***
6914935-G-A 7046894-G-A ***
10654487-C-G,T ***
10887360-T-C ***
15439803-C-A 13327923-C-A ***
14936469-TA-T 12824534-TA-T 10×A***
10691448-C-G ***
17315060-C-A 15203180-C-A ***
4215621-G-T 4347580-G-T ***
18086419-T-C 15974539-T-C ***
13448344-A-G 11292668-A-G ***
4983174-ATTTTT-A 5115133-ATTTTT-A 28×T***
21190875-CT-C,CTT 19028989-CT-C,CTT 13×T***
13690152-A-T 11534476-A-T ***
13474085-T-G 11318409-T-G ***
15494568-C-A 13382688-C-A ***
10930768-C-T ***
13997771-CT-C,CTT 11877065-CT-C,CTT 17×T***
11009226-C-A ***
7199342-CTT-C,CT 7331301-CTT-C,CT 24×T***
13477649-A-T 11321973-A-T ***
6650115-C-A 6782074-C-A ***
6878073-CAAA-C,CAA 7010032-CAAA-C,CAA 17×A***
22172490-G-T 20010604-G-T ***
10763307-A-C,T ***
10969018-C-T ***
21912181-C-A 19750295-C-A ***
21512081-A-G 19350195-A-G ***
7766678-TAA-T 7898637-TAA-T 14×A***
21720034-CA-C 19558148-CA-C 10×A***
24386960-CTA-C 22240813-CTA-C ***
20459042-CAAAA-C 18297156-CAAAA-C P5_Dst 21×A***
14552150-GA-G,GAA 12440351-GA-G,GAA 11×A***
8535204-GTTT-G 8667163-GTTT-G 19×T***
9029736-CTTT-C,CTT 9192127-CTTT-C,CTT 16×T***
17405773-C-A 15293893-C-A ***
3648855-T-C 3780814-T-C ***
9482683-T-TA 9645074-T-TA 10×A***
18138383-G-A 16026503-G-A ***
5523434-C-A 5655393-C-A ***
6589772-G-T 6721731-G-T ***
13474059-G-GT 11318383-G-GT ***
21946488-C-A 19784602-C-A ***
14045455-G-GA 11924749-G-GA S16218 9×A***
6352178-G-GA 6484137-G-GA 10×A***
10691520-T-TTCCAC ***
13260461-C-T 11104785-C-T ***
6425801-C-A 6557760-C-A ***
13474078-C-A 11318402-C-A ***
5577118-CTTT-C 5709077-CTTT-C 12×T***
13474084-C-T 11318408-C-T ***
13479166-T-C 11323490-T-C ***
13690148-T-C 11534472-T-C ***
13963824-ATTTTTTTTTTTTTTTTTTT-A 11843118-ATTTTTTTTTTTTTTTTTTT-A 49×T***
17311730-T-TA 15199850-T-TA 11×A***
14105084-A-G 11984378-A-G ***
15842560-T-TC 13730680-T-TC ***
7146776-GTT-G,GT 7278735-GTT-G,GT 18×T***
56728197-G-T ***
21541117-C-A 19379231-C-A ***
56842846-G-T ***
10751023-C-CGGTTT ***
10997517-C-A ***
21890771-T-TA 19728885-T-TA 10×A***
17374805-G-T 15262925-G-T ***
15538026-G-GA 13426146-G-GA 9×A***
21713856-C-A 19551970-C-A ***
10974566-C-A ***
11006718-C-A ***
10887382-C-A ***
16508397-C-A 14396517-C-A ***
10755361-C-G ***
10887355-T-C ***
10755384-C-T ***
21200434-TA-T,TAA 19038548-TA-T,TAA 12×A***
16778333-C-CT 14666453-C-CT 10×T***
10691372-C-G ***
19255535-C-A 17143655-C-A ***
18883278-C-A 16771398-C-A ***
18892095-A-T 16780215-A-T ***
18933572-C-T 16821692-C-T ***
10826733-C-G ***
10755359-A-C ***
10824012-G-T ***
6090799-C-A 6222758-C-A ***
16930624-T-C 14818744-T-C ***
19339896-C-A 17228016-C-A ***
10965593-CC-AG ***
19549517-G-A 17437637-G-A ***
14069295-A-AT 11948589-A-AT 9×T***
20895311-TCTTTTTCCA-T 18733425-TCTTTTTCCA-T P4_Dst ***
10969033-C-T ***
16460157-C-A 14348277-C-A ***
8049721-C-A 8181680-C-A ***
56749965-G-A ***
23734340-G-T 21572454-G-T ***
23554093-A-G 21392207-A-G ***
10850352-G-T ***
11015254-G-T ***
13455758-C-A 11300082-C-A ***
10950546-A-C ***
3626282-C-A 3758241-C-A ***
10921503-A-C,T ***
10790123-C-A ***
17021761-G-GAA 14909881-G-GAA 14×A***
22103725-C-A 19941839-C-A ***
10860031-A-C ***
15904256-C-A 13792376-C-A ***
28805766-T-C 26659619-T-C ***
15780290-C-A 13668410-C-A ***
16070482-C-A 13958602-C-A ***
23439997-C-A 21278111-C-A ***
13474662-T-A 11318986-T-A ***
9964624-C-T 10127015-C-T ***
22812659-C-A 20650773-C-A ***
22867485-G-A 20705599-G-A ***
19146569-CTTTTT-C 17034689-CTTTTT-C 28×T***
8154808-CTT-C 8286767-CTT-C 11×T***
13446667-CTACACTCCAT-C 11290991-CTACACTCCAT-C ***
9983825-C-A 10146216-C-A ***
28791322-G-A 26645175-G-A ***
9184183-C-A 9346574-C-A ***
9849947-C-A 10012338-C-A Y132082 ***
9798081-C-A 9960472-C-A ***
22951779-C-A 20789893-C-A ***
10865820-CT-C,TC ***
16277617-C-A 14165737-C-A ***
16078537-C-T 13966657-C-T ***
14300988-C-A 12180282-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 545516871487470946057038212
Kit: 5455161513422294731488361866
Used in age calculations1513422294731488361866
Counts of SNPs95
Variant counts last updated 2020-05-04 03:24:05.


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