Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z46375 > DF106 > DF104 > DF105 > A223 > BY3339 > FGC35903 > BY137822

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY3
B46333
BigY2
B46333
19727427-G-GT 17615547-G-GT P5_Prx 31×TA*
26137874-G-A 23991727-G-A P1_Y1 A*A*
19666598-G-A 17554718-G-A P5_Prx A*A*
20513178-C-T 18351292-C-T P5_Dst A*
3412173-C-T 3544132-C-T A*
13450534-C-T 11294858-C-T A*
26253773-C-A 24107626-C-A P1_Y1 A*A*
4381152-G-GT 4513111-G-GT 10×TA*
2924414-G-A 3056373-G-A A*
17946685-AT-A 15834805-AT-A **+
14222054-T-G 12101348-T-G BY94031 YY++
19219048-T-C 17107168-T-C BY127358 YY++
14040-T-G **+
22257794-T-G 20095908-T-G DYZ19 **
17578248-A-ATG 15466368-A-ATG 13×TG*
15764251-A-G 13652371-A-G **
15761857-A-G 13649977-A-G **
15740551-A-C 13628671-A-C **
15700544-G-T 13588664-G-T **
23114014-AAT-A 20952128-AAT-A 22×AT**
15834097-C-A 13722217-C-A **
15940094-T-C 13828214-T-C **
15565392-G-T 13453512-G-T **
15950271-C-A 13838391-C-A **
15967628-C-A 13855748-C-A **
16003946-G-C 13892066-G-C **
16016409-G-T 13904529-G-T **
16047701-T-C 13935821-T-C **
15605691-C-A 13493811-C-A **
15333912-C-G 13222030-C-G **
15565390-T-G 13453510-T-G **
15485466-T-G 13373586-T-G **
15485456-G-T 13373576-G-T **
15485440-G-T 13373560-G-T **
15483778-A-G 13371898-A-G **
15432912-A-G 13321032-A-G **
15335904-C-T 13224022-C-T **
15198741-C-A 13086827-C-A **
15168827-A-G 13056913-A-G **
15127202-T-A 13015289-T-A **
15041137-G-T 12929227-G-T **
14932032-G-T 12820097-G-T **
14927294-C-T 12815359-C-T **
14859083-C-A 12747149-C-A **
16047727-C-G 13935847-C-G **
16394243-C-A 14282363-C-A **
16047731-A-G 13935851-A-G **
17372081-C-A 15260201-C-A **
18528074-G-T 16416194-G-T P6_Dst **
18430157-A-C 16318277-A-C P6_Dst **
18430128-A-T 16318248-A-T P6_Dst **
18390158-G-T 16278278-G-T P6_Gap **
17927429-C-A 15815549-C-A **
17923394-A-C 15811514-A-C **
17885643-T-C 15773763-T-C **
17885625-T-C 15773745-T-C **
17885606-G-C 15773726-G-C **
17770586-C-A 15658706-C-A **
17486400-C-A 15374520-C-A **
17481212-G-C 15369332-G-C **
17440334-C-A 15328454-C-A **
17372069-C-A 15260189-C-A **
16071894-C-A 13960014-C-A **
17369274-G-A 15257394-G-A **
17330321-C-A 15218441-C-A **
17323745-G-C 15211865-G-C **
17222828-C-G 15110948-C-G **
17218181-T-C 15106301-T-C **
17175144-C-A 15063264-C-A **
17155938-G-A 15044058-G-A **
16692117-CAAAAAA-C 14580237-CAAAAAA-C 28×A**
16458278-A-G 14346398-A-G **
16394294-G-C 14282414-G-C **
14844886-C-A 12732952-C-A **
16243126-G-T 14131246-G-T **
16218053-G-T 14106173-G-T **
16084221-G-T 13972341-G-T **
14848972-C-A 12737038-C-A **
14512550-G-T 12400755-G-T **
14691823-T-G 12579889-T-G **
13288786-C-A 11133110-C-A **
13721684-G-T 11566008-G-T **
13680987-A-C 11525311-A-C **
13643038-G-T 11487362-G-T **
13643025-G-T 11487349-G-T **
13637317-T-A 11481641-T-A **
13567613-A-C 11411937-A-C **
13480917-A-C 11325241-A-C **
13480897-T-G 11325221-T-G **
13478133-A-C 11322457-A-C **
13471971-C-A 11316295-C-A **
13463091-G-A 11307415-G-A **
13463064-G-A 11307388-G-A **
13463063-T-C 11307387-T-C **
13446469-A-G 11290793-A-G **
13463087-C-A 11307411-C-A **
11658976-G-A **
13199283-T-C 11043607-T-C **
11017593-C-A **
11011191-C-G **
11010453-C-A **
11002085-T-C **
11002079-T-G **
11002067-C-CCACT **
10995766-C-A **
10979488-C-G **
10967509-AT-A **
10965269-C-A **
10965259-C-A **
10923587-T-C **
10900885-T-G **
11658953-A-C **
11658997-A-G **
14691798-G-A 12579864-G-A **
14183089-A-C 12062383-A-C **
14690889-G-T 12578955-G-T **
14631042-A-G 12519111-A-G **
14593048-C-A 12481248-C-A **
14515230-C-A 12403435-C-A **
18619083-T-G 16507203-T-G **
14512540-A-G 12400745-A-G **
14485876-G-T 12365145-G-T **
14470708-C-A 12349977-C-A **
14470701-G-A 12349970-G-A **
14451954-G-A 12331227-G-A **
14311607-A-C 12190901-A-C **
14236020-C-CT 12115314-C-CT **
14236001-T-A 12115295-T-A **
14198416-A-T 12077710-A-T **
14183083-A-C 12062377-A-C **
11659429-A-C **
13911528-C-A 11790822-C-A **
13842654-AATGG-A 11721948-AATGG-A **
13859379-G-C 11738673-G-C **
13870834-T-G 11750128-T-G **
13870876-G-T 11750170-G-T **
13896850-A-C 11776144-A-C **
13900006-C-A 11779300-C-A **
13937463-C-G 11816757-C-G **
14149478-G-T 12028772-G-T **
13958547-G-T 11837841-G-T **
13958549-G-T 11837843-G-T **
13990143-AT-A 11869437-AT-A **
14067915-G-C 11947209-G-C **
14143949-C-A 12023243-C-A **
14149440-G-T 12028734-G-T **
18619059-G-T 16507179-G-T **
19415637-A-G 17303757-A-G **
18628229-C-A 16516349-C-A **
23609465-C-A 21447579-C-A **
26124626-GA-G 23978479-GA-G P1_Y1 **
25988086-C-A 23841939-C-A P1_Y1 **
25881886-G-T 23735739-G-T P1_Y1 **
25466776-C-A 23320629-C-A P2_r2 **
25099966-G-T 22953819-G-T g1 **
25099943-T-G 22953796-T-G g1 **
24047617-T-C 21901470-T-C **
24047606-C-A 21901459-C-A **
24008408-A-C 21862261-A-C **
23848424-G-T 21686538-G-T **
23848401-T-A 21686515-T-A **
23848027-C-G 21686141-C-G **
23801606-T-A 21639720-T-A **
23588599-T-G 21426713-T-G **
27641478-G-A 25495331-G-A P1_Y2 **
23564704-C-A 21402818-C-A **
23460600-A-C 21298714-A-C **
23441261-C-A 21279375-C-A **
23434164-C-A 21272278-C-A **
23397183-C-A 21235297-C-A **
23377525-T-G 21215639-T-G **
23377462-G-T 21215576-G-T **
23277724-C-A 21115838-C-A **
23259151-C-G 21097265-C-G **
23005308-T-C 20843422-T-C **
22996859-A-C 20834973-A-C **
22985078-T-G 20823192-T-G **
22951811-A-C 20789925-A-C **
22948199-T-C 20786313-T-C **
27467094-G-T 25320947-G-T P1_Y2 **
27823821-A-T 25677674-A-T P1_Y2 **
22903614-A-C 20741728-A-C **
56831294-C-A **
21002521-T-C 18840635-T-C P4_Dst **
18297610-G-T 16185730-G-T P6_Prx **
18121356-TC-T 16009476-TC-T **
13405290-T-C 11249614-T-C **
6329685-T-C 6461644-T-C IR3_Dst **
5821098-T-C 5953057-T-C **
5207405-AT-A 5339364-AT-A **
28091457-C-CAA 25945310-C-CAA P1_Y2 **
56849144-G-A **
56844382-G-T **
56833282-A-G **
56833242-A-ATTTCC **
56832749-C-A **
56832507-C-CACTCA **
56830028-C-CACTCT **
28008342-T-C 25862195-T-C P1_Y2 **
56828453-C-A **
56827351-C-T **
56678465-A-T **
28793046-GA-G 26646899-GA-G **
28758248-T-G 26612101-T-G **
28731863-A-G 26585716-A-G **
28703560-C-A 26557413-C-A **
28701813-A-C 26555666-A-C **
28685889-T-G 26539742-T-G **
28655594-G-T 26509447-G-T **
28596822-G-A 26450675-G-A **
28514000-C-A 26367853-C-A **
28031768-T-C 25885621-T-C P1_Y2 **
28031763-T-C 25885616-T-C P1_Y2 **
22903625-T-G 20741739-T-G **
22855356-A-C 20693470-A-C **
18753461-G-T 16641581-G-T **
20842583-A-C 18680697-A-C P4_Dst **
21334617-C-A 19172731-C-A **
21256011-A-C 19094125-A-C **
21256005-C-A 19094119-C-A **
21256001-A-C 19094115-A-C **
21255999-C-A 19094113-C-A **
21255998-C-A 19094112-C-A **
21255984-G-C 19094098-G-C **
21255912-T-C 19094026-T-C **
21240669-C-A 19078783-C-A **
21238666-C-A 19076780-C-A FT83996 **
21167383-C-A 19005497-C-A **
21096253-C-A 18934367-C-A **
21096234-C-A 18934348-C-A **
21087095-T-A 18925209-T-A **
20842539-A-T 18680653-A-T P4_Dst **
21338155-A-C 19176269-A-C **
20842534-GAAA-G 18680648-GAAA-G P4_Dst **
20842530-GA-G 18680644-GA-G P4_Dst **
20817562-T-C 18655676-T-C P4_Gap **
20101730-A-G 17989850-A-G P5_Dst **
20101726-A-G 17989846-A-G P5_Dst **
20101703-T-G 17989823-T-G P5_Dst **
20004111-C-A 17892231-C-A P5_Prx **
19866991-C-A 17755111-C-A P5_Prx **
19554575-C-T 17442695-C-T **
19444162-T-A 17332282-T-A **
10898970-C-G **
19385109-A-C 17273229-A-C **
19074960-C-A 16963080-C-A **
18792762-A-C 16680882-A-C **
21338085-A-G 19176199-A-G **
21338177-T-C 19176291-T-C **
22855328-T-C 20693442-T-C **
21975407-G-T 19813521-G-T **
22855315-C-G 20693429-C-G **
22809904-A-C 20648018-A-C **
22730655-T-G 20568769-T-G **
22720463-C-A 20558577-C-A **
22720455-G-T 20558569-G-T **
22720450-C-T 20558564-C-T **
22598732-C-T 20436846-C-T **
22506446-A-G 20344560-A-G BY225208 DYZ19 **
22366354-T-G 20204468-T-G DYZ19 **
22366346-G-A 20204460-G-A DYZ19 **
22222181-C-A 20060295-C-A DYZ19 **
22135623-G-T 19973737-G-T **
22122142-T-C 19960256-T-C **
22114873-T-A 19952987-T-A **
21935049-C-A 19773163-C-A **
21338313-G-A 19176427-G-A **
21862232-G-T 19700346-G-T **
21862214-G-T 19700328-G-T **
21737688-C-A 19575802-C-A **
21714702-T-G 19552816-T-G **
21673152-T-G 19511266-T-G **
21673150-A-C 19511264-A-C FT151505 **
21673115-C-A 19511229-C-A **
21673104-G-C 19511218-G-C **
21658548-G-T 19496662-G-T **
21547502-G-T 19385616-G-T **
21514153-A-C 19352267-A-C **
21474609-A-C 19312723-A-C **
21397559-C-A 19235673-C-A **
21363176-T-G 19201290-T-G **
10900805-A-C **
13234480-T-C 11078804-T-C **
10894110-C-T **
13463100-G-T 11307424-G-T **
8261180-C-A 8393139-C-A **
17038343-C-A 14926463-C-A **
17152709-C-A 15040829-C-A **
22068696-C-A 19906810-C-A **
11014460-TC-T **
17676329-C-A 15564449-C-A **
16412864-C-A 14300984-C-A **
15635916-C-A 13524036-C-A **
15850945-C-A 13739065-C-A **
15746414-C-A 13634534-C-A **
28632792-C-A 26486645-C-A **
7580029-C-A 7711988-C-A **
13478132-C-A 11322456-C-A **
13488911-C-A 11333235-C-A **
14600534-C-A 12488734-C-A **
18981228-C-A 16869348-C-A **
56833289-T-C **
17191644-C-A 15079764-C-A **
10792774-A-T **
9980417-C-A 10142808-C-A **
28515328-A-C 26369181-A-C **
18382578-C-A 16270698-C-A P6_Gap **
56830040-T-G **
23802006-C-A 21640120-C-A **
23420574-C-A 21258688-C-A **
13643161-C-A 11487485-C-A **
14511377-C-A 12399582-C-A **
8713108-G-A 8845067-G-A **
14236025-TCA-T 12115319-TCA-T **
22345712-G-T 20183826-G-T DYZ19 **
8094841-C-A 8226800-C-A **
2665485-C-A 2797444-C-A **
10828610-C-A **
2729673-T-G 2861632-T-G FT94835 **
9930102-C-T 10092493-C-T **
4302197-C-A 4434156-C-A **
6128682-C-A 6260641-C-A **
2729674-GA-G 2861633-GA-G **
22996923-C-A 20835037-C-A **
11024456-C-A **
11658940-T-G **
23205433-G-T 21043547-G-T **
20809380-A-C 18647494-A-C P4_Gap **
5560626-C-A 5692585-C-A **
17547829-G-T 15435949-G-T **
22449528-C-A 20287642-C-A DYZ19 **
13722732-G-T 11567056-G-T **
22517099-C-A 20355213-C-A **
13937466-G-T 11816760-G-T **
10849062-C-A **
16654896-C-A 14543016-C-A **
5059676-C-T 5191635-C-T **
10682496-C-A **
17340857-T-G 15228977-T-G **
56831004-A-C **
15556659-C-A 13444779-C-A **
3047716-C-A 3179675-C-A **
14848948-C-A 12737014-C-A **
5824219-C-A 5956178-C-A **
14355539-C-A 12234834-C-A **
10754942-CAT-C **
10754938-ATT-A **
10956600-A-G **
7411510-C-A 7543469-C-A **
10866818-C-G FGCLR48 **
10658121-C-A **
15778676-C-A 13666796-C-A **
10661353-A-ATCCCT **
14369108-C-A 12248404-C-A **
7142473-G-C 7274432-G-C **
23825046-T-TTA 21663160-T-TTA 9×TA**
13859413-T-A 11738707-T-A **
16003918-C-A 13892038-C-A **
14743946-C-A 12632015-C-A **
56707163-C-A **
6892705-C-A 7024664-C-A **
22996924-C-A 20835038-C-A **
9522505-C-A 9684896-C-A **
8369544-A-C 8501503-A-C **
17224467-C-A 15112587-C-A **
18628150-C-A 16516270-C-A **
10889761-A-AGC **
56742676-G-C **
13705510-G-T 11549834-G-T **
10772505-C-G **
20360958-T-TA 18199072-T-TA P5_Dst **
10746977-C-A **
10746903-C-T **
10971939-T-C **
56833297-A-T **
58978928-T-C 56832781-T-C **
13228247-C-A 11072571-C-A **
6748697-C-A 6880656-C-A **
28758266-G-T 26612119-G-T ZS1274 **
7050129-C-A 7182088-C-A Z17611FGC35275 **
13478138-C-A 11322462-C-A **
10889760-C-CTTT **
10889775-C-G **
9730486-G-A 9892877-G-A BY53930 IR3_Prx **
6697238-C-A 6829197-C-A **
18926872-C-CAA 16814992-C-CAA 17×A**
10026637-C-A 10189028-C-A **
18586751-T-C 16474871-T-C **
21111718-C-A 18949832-C-A **
23741931-C-A 21580045-C-A **
16441049-C-A 14329169-C-A **
15898831-C-A 13786951-C-A **
3051896-C-A 3183855-C-A **
18430140-G-T 16318260-G-T P6_Dst **
10693233-C-T **
21673139-C-A 19511253-C-A **
14236008-C-A 12115302-C-A **
8983208-G-T 9145599-G-T **
10887996-C-T **
11017513-C-A **
10889783-T-A **
10682497-C-A **
20579234-C-A 18417348-C-A P5_Dst **
56837284-C-A **
14568284-C-A 12456484-C-A **
10682549-T-G **
3284189-C-A 3416148-C-A **
15593297-A-T 13481417-A-T **
16003914-C-A 13892034-C-A **
18263891-C-A 16152011-C-A **
11028157-TTCCAC-T **
56829857-A-T **
22517098-C-A 20355212-C-A **
13961345-C-A 11840639-C-A **
11643694-G-C **
21324228-C-A 19162342-C-A **
14427-G-A **
20249704-A-AG 18087818-A-AG P5_Dst **
10080437-G-T 10242828-G-T Y25097 **
7082639-A-C 7214598-A-C **
10686519-T-G **
6916452-C-G 7048411-C-G **
6835422-C-A 6967381-C-A **
6655061-G-T 6787020-G-T **
10657341-A-G **
6634309-T-G 6766268-T-G **
6626901-T-C 6758860-T-C **
6580461-C-A 6712420-C-A **
10694147-T-G **
6428614-A-G 6560573-A-G **
7156701-G-C 7288660-G-C **
6282341-A-T 6414300-A-T IR3_Dst **
9891056-C-A 10053447-C-A **
10763404-T-A **
6282336-C-G 6414295-C-G IR3_Dst **
6242430-C-A 6374389-C-A IR3_Dst **
6210662-C-A 6342621-C-A IR3_Dst **
10040696-GA-G 10203087-GA-G **
10784849-T-TC **
10025362-G-T 10187753-G-T **
6108773-G-T 6240732-G-T **
6102995-C-A 6234954-C-A **
7116123-A-C 7248082-A-C **
8799607-C-G 8931566-C-G **
8403301-G-GAA 8535260-G-GAA **
7309127-C-G 7441086-C-G **
10682483-A-C **
10682556-C-G **
8407340-A-C 8539299-A-C **
7832332-C-A 7964291-C-A **
7821043-C-G 7953002-C-G **
7755379-C-A 7887338-C-A **
7630288-C-T 7762247-C-T **
7537726-G-T 7669685-G-T **
7423890-G-T 7555849-G-T **
7397723-C-A 7529682-C-A **
10682592-C-G **
7307693-C-A 7439652-C-A **
10684234-TATTCC-T **
7286812-C-A 7418771-C-A **
7285428-A-G 7417387-A-G **
7281083-T-G 7413042-T-G **
7274917-C-A 7406876-C-A **
10967498-C-T **
7202233-T-G 7334192-T-G **
8673246-C-A 8805205-C-A **
10684124-C-G **
7196542-G-C 7328501-G-C **
10672545-A-G **
7196192-A-T 7328151-A-T **
8987077-T-A 9149468-T-A **
5761377-A-G 5893336-A-G **
8164952-C-T 8296911-C-T **
2759184-T-C 2891143-T-C **
3078516-A-T 3210475-A-T **
10790282-T-C **
2948470-C-A 3080429-C-A **
9483511-T-G 9645902-T-G **
10807296-AA-T **
9560143-A-G 9722534-A-G IR3_Prx **
9610743-G-A 9773134-G-A IR3_Prx **
2852449-C-A 2984408-C-A **
10816453-A-G **
2785172-G-C 2917131-G-C **
2766762-CT-C 2898721-CT-C **
2744697-C-A 2876656-C-A **
3500660-G-T 3632619-G-T **
10826794-C-A **
10832802-C-A **
10839016-ATTCCC-A **
9945441-A-T 10107832-A-T **
18901126-C-A 16789246-C-A **
9416659-C-A 9579050-C-A **
18748668-C-A 16636788-C-A **
22774917-C-A 20613031-C-A **
28500076-A-C 26353929-A-C **
17101708-C-A 14989828-C-A **
9899501-A-C 10061892-A-C **
10657371-A-T **
3347084-G-T 3479043-G-T **
3500661-T-G 3632620-T-G **
5644730-T-G 5776689-T-G **
3500674-T-G 3632633-T-G **
5495650-C-A 5627609-C-A **
5495627-A-C 5627586-A-C **
9131171-A-G 9293562-A-G **
5215851-T-A 5347810-T-A **
4880923-C-A 5012882-C-A **
4734387-A-C 4866346-A-C **
9171580-G-T 9333971-G-T **
4469015-G-T 4600974-G-T **
4465598-C-A 4597557-C-A **
4465590-A-C 4597549-A-C **
4347597-A-G 4479556-A-G **
4103302-T-G 4235261-T-G **
9319930-G-T 9482321-G-T **
4039789-T-C 4171748-T-C **
3850000-C-A 3981959-C-A **
3849530-C-A 3981489-C-A **
3804525-A-C 3936484-A-C **
10789493-A-C **
9319935-G-T 9482326-G-T **
3500929-C-A 3632888-C-A **
3500701-G-T 3632660-G-T **
3500696-T-G 3632655-T-G FT11585 **
3500685-G-T 3632644-G-T **
18384490-CAAAA-C 16272610-CAAAA-C P6_Gap 19×A***
13449394-C-A 11293718-C-A ***
9958231-C-A 10120622-C-A ***
4277201-CT-C,CTT 4409160-CT-C,CTT 20×T***
15589496-GA-G 13477616-GA-G 9×A***
3963831-A-G 4095790-A-G ***
22507679-G-A 20345793-G-A DYZ19 ***
13489686-C-T 11334010-C-T ***
17644110-T-C 15532230-T-C ***
13453204-CACTCA-C,CATTCA 11297528-CACTCA-C,CATTCA ***
8074046-T-C 8206005-T-C ***
14794032-GT-G 12682103-GT-G 9×T***
5178062-CA-C,CAA 5310021-CA-C,CAA 20×A***
4373606-CT-C,CTT 4505565-CT-C,CTT 14×T***
4305373-T-C 4437332-T-C ***
3331479-A-G 3463438-A-G ***
13194599-C-A 11038923-C-A ***
16374686-GAA-G 14262806-GAA-G 19×A***
10769458-T-G ***
13476639-C-CG,G 11320963-C-CG,G ***
13453441-T-C 11297765-T-C ***
23345807-C-T 21183921-C-T ***
13470946-G-A 11315270-G-A ***
7363157-T-TAA 7495116-T-TAA 18×A***
2773691-TAAA-T,TAA 2905650-TAAA-T,TAA 19×A***
11014463-A-AT ***
28593880-C-A 26447733-C-A ***
8893036-AT-A,ATT 9024995-AT-A,ATT 13×T***
13488859-C-G 11333183-C-G ***
15909799-C-A 13797919-C-A Y95109 ***
5110127-T-TAA 5242086-T-TAA 12×A***
13811164-G-T 11690458-G-T ***
15260684-CTTTTTT-C 13148768-CTTTTTT-C 25×T***
14949171-C-T 12837245-C-T ***
5829093-A-T 5961052-A-T ***
21316717-C-A 19154831-C-A ***
15468678-CAAAA-C,CAAAAA 13356798-CAAAA-C,CAAAAA 23×A***
2841104-C-CTT 2973063-C-CTT 17×T***
20865487-GTATA-G,GTATATA 18703601-GTATA-G,GTATATA P4_Dst 9×TA***
4936914-A-T 5068873-A-T ***
8473803-CTT-C 8605762-CTT-C 12×T***
19223507-C-A 17111627-C-A ***
19104706-C-A 16992826-C-A ***
13463131-T-A 11307455-T-A ***
18997412-C-A 16885532-C-A ***
13463136-C-G 11307460-C-G ***
18720356-C-A 16608476-C-A ***
16570476-TTATTATCAATAATAAATTTTATTGA-T 14458596-TTATTATCAATAATAAATTTTATTGA-T ***
17064726-C-T 14952846-C-T ***
3507900-G-GA 3639859-G-GA 10×A***
17527440-ATATATATATATATATATATATATATATAT-A 15415560-ATATATATATATATATATATATATATATAT-A ***
13474697-C-A 11319021-C-A ***
14840961-C-A 12729028-C-A ***
13488867-G-C 11333191-G-C ***
7976421-C-A 8108380-C-A ***
13493912-T-C 11338236-T-C ***
9023045-G-T 9185436-G-T 9×T***
8852244-A-G 8984203-A-G ***
24384155-C-A 22238008-C-A ***
13811171-AT-A 11690465-AT-A ***
23044213-C-A 20882327-C-A BY208730 ***
13811176-A-ACCGTAT 11690470-A-ACCGTAT ***
14395487-AT-A 12274783-AT-A 8×T***
10754961-C-A ***
8375029-C-A 8506988-C-A ***
7935855-TA-T,TAA 8067814-TA-T,TAA 22×A***
13811167-T-A 11690461-T-A ***
6807702-CTT-C 6939661-CTT-C 12×T***
22964966-C-A 20803080-C-A ***
10801684-T-A,G ***
10801686-C-A,G ***
14457690-C-A 12336963-C-A ***
22527067-C-A 20365181-C-A ***
11014418-A-T ***
7036579-C-CT,CTT 7168538-C-CT,CTT 11×T***
22011699-C-A 19849813-C-A ***
15477289-C-A 13365409-C-A ***
13463144-C-A 11307468-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: B46333911787775040857445456
Kit: B463331486262493030928280723
Used in age calculations1486262493030928280723
Counts of SNPs22
Variant counts last updated 2019-10-28 04:22:14.



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