Deigan
BigY2: 7894MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 7894 |
---|---|---|---|---|---|---|---|---|
28817571-C-A | 26671424-C-A | A* | ||||||
13687192-G-A | 11531516-G-A | A* | ||||||
28817077-G-T | 26670930-G-T | A* | ||||||
15934384-G-A | 13822504-G-A | Y129380 BY32839 | Y | Y | + | |||
22246826-C-T | 20084940-C-T | BY214069 | DYZ19 | + | ||||
22297935-T-A | 20136049-T-A | BY32842 | DYZ19 | + | ||||
22509964-T-A | 20348078-T-A | BY225595 | DYZ19 | + | ||||
22319519-T-A | 20157633-T-A | DYZ19 | * | |||||
16220764-C-A | 14108884-C-A | ** | ||||||
16309113-C-T | 14197233-C-T | ** | ||||||
14251701-C-A | 12130995-C-A | ** | ||||||
13804066-G-C | 11683360-G-C | Z16985 | ** | |||||
13884557-C-A | 11763851-C-A | ** | ||||||
2906733-C-A | 3038692-C-A | ** | ||||||
9507982-C-CTT | 9670373-C-CTT | 34×T | ** | |||||
17928421-C-A | 15816541-C-A | CTS54 | CTS8309 | ** | ||||
3389692-C-A | 3521651-C-A | ** | ||||||
25719211-T-A | 23573064-T-A | Y32051 | P1_b3 | ** | ||||
5404122-G-T | 5536081-G-T | ** | ||||||
10801513-A-C | ** | |||||||
10801518-A-G | ** | |||||||
10801533-A-C | ** | |||||||
10753356-G-T | ** | |||||||
16309049-T-G | 14197169-T-G | ** | ||||||
16309056-T-C | 14197176-T-C | ** | ||||||
10666956-T-C | FT275550 | ** | ||||||
10689936-C-A | ** | |||||||
10783453-C-A | ** | |||||||
11030681-A-C | ** | |||||||
3732638-C-A | 3864597-C-A | ** | ||||||
17718307-T-G | 15606427-T-G | ** | ||||||
17718312-T-C | 15606432-T-C | ** | ||||||
17718315-A-G | 15606435-A-G | ** | ||||||
27699842-A-T | 25553695-A-T | P1_Y2 | ** | |||||
10986384-C-T | FT439289 | ** | ||||||
10986394-C-T | ** | |||||||
10986417-T-C | ** | |||||||
10986432-T-G | ** | |||||||
21283313-C-A | 19121427-C-A | ** | ||||||
11025052-C-T | ** | |||||||
11025057-C-G | ** | |||||||
5927404-G-T | 6059363-G-T | ** | ||||||
17703257-AAG-A | 15591377-AAG-A | ** | ||||||
3051314-C-A | 3183273-C-A | ** | ||||||
10756611-T-G | ** | |||||||
10961533-A-G | ** | |||||||
10875757-A-T | ** | |||||||
16309169-CG-C | 14197289-CG-C | ** | ||||||
16309175-A-G | 14197295-A-G | ** | ||||||
56685540-G-A | ** | |||||||
10678546-C-T | ** | |||||||
10780046-C-A | ** | |||||||
11026002-C-A | ** | |||||||
7374385-C-A | 7506344-C-A | ** | ||||||
10828668-A-T | ** | |||||||
10982407-T-A | ** | |||||||
10982408-T-C | ** | |||||||
24127452-C-A | 21981305-C-A | P3_b1 | ** | |||||
24600693-T-A | 22454546-T-A | P3_t2 | ** | |||||
8094783-C-A | 8226742-C-A | ** | ||||||
10982406-C-G | ** | |||||||
10982419-T-A | ** | |||||||
10982423-T-C | ** | |||||||
10982463-C-T | ** | |||||||
10862759-A-T | ** | |||||||
13856396-C-A | 11735690-C-A | FT146250 | ** | |||||
28792405-G-T | 26646258-G-T | ** | ||||||
6690254-C-A | 6822213-C-A | ** | ||||||
17741320-C-A | 15629440-C-A | ** | ||||||
19600618-G-T | 17488738-G-T | P5_Prx | ** | |||||
7364017-C-A | 7495976-C-A | ** | ||||||
10880330-T-A | ** | |||||||
10880338-A-T | ** | |||||||
10880344-T-G | ** | |||||||
10929223-G-A | FGC77963 | ** | ||||||
7784471-C-A | 7916430-C-A | ** | ||||||
10684034-C-A | ** | |||||||
11030656-A-C | FT440180 | ** | ||||||
27971768-AAG-A | 25825621-AAG-A | P1_Y2 | ** | |||||
7076612-C-CA | 7208571-C-CA | 29×A | ** | |||||
11030146-C-A | ** | |||||||
5185310-C-A | 5317269-C-A | ** | ||||||
10920266-GT-G | ** | |||||||
13700622-T-A | 11544946-T-A | ** | ||||||
4557636-T-C | 4689595-T-C | ** | ||||||
14458097-G-T | 12337370-G-T | ** | ||||||
4582399-C-A | 4714358-C-A | ** | ||||||
10862787-T-C | ** | |||||||
21262544-C-A | 19100658-C-A | ** | ||||||
5186494-G-T | 5318453-G-T | ** | ||||||
10668633-T-C | ** | |||||||
56685621-G-T | ** | |||||||
10937353-G-T | ** | |||||||
4447729-C-A | 4579688-C-A | ** | ||||||
10975583-C-A | ** | |||||||
6509415-C-A | 6641374-C-A | ** | ||||||
13643591-C-A | 11487915-C-A | ** | ||||||
10935573-A-T | ** | |||||||
20775169-C-A | 18613283-C-A | P4_Prx | ** | |||||
10946599-C-A | ** | |||||||
14605198-C-A | 12493400-C-A | ** | ||||||
10813141-C-A | ** | |||||||
2788361-A-C | 2920320-A-C | ** | ||||||
7532276-GTATATATATATATATATATATATA-G | 7664235-GTATATATATATATATATATATATA-G | 28×TA | ** | |||||
10866004-T-A | ** | |||||||
10862749-G-T | ** | |||||||
10923744-C-A | ** | |||||||
14408997-C-A | 12288295-C-A | ** | ||||||
4444966-G-T | 4576925-G-T | ** | ||||||
10785755-C-A | ** | |||||||
24512543-A-C | 22366396-A-C | ** | ||||||
13884578-C-A | 11763872-C-A | ** | ||||||
7241980-G-A | 7373939-G-A | ** | ||||||
7352990-C-A | 7484949-C-A | ** | ||||||
14552414-C-A | 12440615-C-A | ** | ||||||
10892142-G-T | ** | |||||||
25719215-T-A | 23573068-T-A | P1_b3 | ** | |||||
28818153-A-G | 26672006-A-G | ** | ||||||
3271546-C-A | 3403505-C-A | ** | ||||||
9022969-G-T | 9185360-G-T | ** | ||||||
22295290-G-A | 20133404-G-A | DYZ19 | ** | |||||
23381082-C-A | 21219196-C-A | ** | ||||||
13872099-G-T | 11751393-G-T | ** | ||||||
16038974-T-G | 13927094-T-G | ** | ||||||
23425421-C-A | 21263535-C-A | ** | ||||||
7535912-G-A | 7667871-G-A | ** | ||||||
10752622-C-A | ** | |||||||
3559651-G-T | 3691610-G-T | ** | ||||||
6757047-C-A | 6889006-C-A | ** | ||||||
11028129-C-T | ** | |||||||
10669441-T-C | ** | |||||||
10972379-C-A | ** | |||||||
10972383-C-T | ** | |||||||
19950156-G-T | 17838276-G-T | P5_Prx | ** | |||||
20815589-C-A | 18653703-C-A | P4_Gap | ** | |||||
13231660-C-A | 11075984-C-A | ** | ||||||
19275217-C-A | 17163337-C-A | ** | ||||||
10804949-C-A | ** | |||||||
11033694-T-C | ** | |||||||
10951295-C-A | ** | |||||||
23096602-C-A | 20934716-C-A | ** | ||||||
11028172-C-G | ** | |||||||
3051442-C-A | 3183401-C-A | ** | ||||||
6694191-C-A | 6826150-C-A | FTB70766 | ** | |||||
15324212-C-A | 13212330-C-A | ** | ||||||
4700326-C-A | 4832285-C-A | ** | ||||||
10944815-G-T | ** | |||||||
3602777-C-A | 3734736-C-A | ** | ||||||
7241988-T-A | 7373947-T-A | ** | ||||||
10866021-C-T | ** | |||||||
18253185-C-A | 16141305-C-A | ** | ||||||
28550479-T-G | 26404332-T-G | ** | ||||||
28633707-C-A | 26487560-C-A | ** | ||||||
10923756-T-C | ** | |||||||
19950182-A-T | 17838302-A-T | P5_Prx | 18×TG | ** | ||||
17499043-C-A | 15387163-C-A | ** | ||||||
19950178-G-T | 17838298-G-T | P5_Prx | ** | |||||
10668628-T-C | ** | |||||||
22319065-T-G | 20157179-T-G | DYZ19 | ** | |||||
21410099-C-A | 19248213-C-A | ** | ||||||
3284554-C-A | 3416513-C-A | ** | ||||||
14392968-C-A | 12272264-C-A | ** | ||||||
13196442-T-A | 11040766-T-A | 4×TCCAC | ** | |||||
3849128-C-A | 3981087-C-A | ** | ||||||
56685536-CAATGGAATGG-C | 4×AATGG | ** | ||||||
9015809-C-A | 9178200-C-A | ** | ||||||
16720557-G-T | 14608677-G-T | ** | ||||||
56850375-C-A | ** | |||||||
15558088-C-A | 13446208-C-A | ** | ||||||
22319290-GTCCTT-G | 20157404-GTCCTT-G | DYZ19 | ** | |||||
5869540-C-A | 6001499-C-A | ** | ||||||
11015647-C-A | ** | |||||||
7239473-T-G | 7371432-T-G | ** | ||||||
5358765-C-A | 5490724-C-A | ** | ||||||
16309041-C-T | 14197161-C-T | ** | ||||||
10800360-C-A | ** | |||||||
5247356-T-G | 5379315-T-G | ** | ||||||
56830177-C-A | ** | |||||||
14355572-A-C | 12234867-A-C | ** | ||||||
10794736-C-A | ** | |||||||
11031511-C-A | ** | |||||||
15742996-C-A | 13631116-C-A | ** | ||||||
28657462-C-A | 26511315-C-A | ** | ||||||
15503487-T-G | 13391607-T-G | ** | ||||||
19412971-C-A | 17301091-C-A | Y43019 | ** | |||||
28778848-T-G | 26632701-T-G | ** | ||||||
3550597-AA-C | 3682556-AA-C | ** | ||||||
11019338-C-A | ** | |||||||
10877089-C-A | ** | |||||||
11027116-T-C | ** | |||||||
10677069-C-A | ** | |||||||
8170300-C-A | 8302259-C-A | ** | ||||||
4257743-C-A | 4389702-C-A | ** | ||||||
10799183-A-C | ** | |||||||
2665730-C-A | 2797689-C-A | ** | ||||||
2708506-C-A | 2840465-C-A | ** | ||||||
2759558-A-C | 2891517-A-C | ** | ||||||
2790415-C-T | 2922374-C-T | ** | ||||||
2915101-T-G | 3047060-T-G | ** | ||||||
3051373-T-G | 3183332-T-G | ** | ||||||
3103593-C-A | 3235552-C-A | ** | ||||||
3321709-G-T | 3453668-G-T | ** | ||||||
3396402-C-A | 3528361-C-A | ** | ||||||
3451978-C-A | 3583937-C-A | ** | ||||||
3535798-C-A | 3667757-C-A | ** | ||||||
3544276-A-C | 3676235-A-C | ** | ||||||
3559620-C-A | 3691579-C-A | ** | ||||||
3559657-T-A | 3691616-T-A | ** | ||||||
3610165-T-G | 3742124-T-G | ** | ||||||
3652910-G-T | 3784869-G-T | ** | ||||||
3726518-A-G | 3858477-A-G | ** | ||||||
3804566-C-A | 3936525-C-A | ** | ||||||
3834204-C-A | 3966163-C-A | ** | ||||||
3867842-C-A | 3999801-C-A | ** | ||||||
3990492-C-T | 4122451-C-T | ** | ||||||
4063540-C-T | 4195499-C-T | ** | ||||||
4159859-A-T | 4291818-A-T | ** | ||||||
4241836-C-A | 4373795-C-A | ** | ||||||
4257702-T-A | 4389661-T-A | ** | ||||||
4401587-G-T | 4533546-G-T | ** | ||||||
4537677-C-A | 4669636-C-A | ** | ||||||
4557531-C-A | 4689490-C-A | ** | ||||||
4561482-C-A | 4693441-C-A | ** | ||||||
4703596-C-A | 4835555-C-A | ** | ||||||
4889841-A-T | 5021800-A-T | ** | ||||||
4914904-TG-T | 5046863-TG-T | ** | ||||||
4958407-A-T | 5090366-A-T | ** | ||||||
5059672-A-AT | 5191631-A-AT | ** | ||||||
5059685-AC-A | 5191644-AC-A | ** | ||||||
5186768-G-A | 5318727-G-A | ** | ||||||
5246688-A-C | 5378647-A-C | ** | ||||||
5728146-T-C | 5860105-T-C | ** | ||||||
5756255-A-C | 5888214-A-C | ** | ||||||
5817359-C-A | 5949318-C-A | ** | ||||||
5905315-G-A | 6037274-G-A | ** | ||||||
6092294-C-A | 6224253-C-A | ** | ||||||
6347797-A-G | 6479756-A-G | ** | ||||||
6356058-C-A | 6488017-C-A | ** | ||||||
6414625-T-A | 6546584-T-A | ** | ||||||
6445120-C-A | 6577079-C-A | ** | ||||||
6458390-C-A | 6590349-C-A | ** | ||||||
6471492-T-C | 6603451-T-C | ** | ||||||
6516162-T-G | 6648121-T-G | ** | ||||||
6682980-C-A | 6814939-C-A | ** | ||||||
6773977-C-A | 6905936-C-A | ** | ||||||
7040317-G-T | 7172276-G-T | ** | ||||||
7062795-C-A | 7194754-C-A | ** | ||||||
7099992-C-G | 7231951-C-G | ** | ||||||
7116928-C-A | 7248887-C-A | ** | ||||||
7131280-A-C | 7263239-A-C | ** | ||||||
7131984-C-A | 7263943-C-A | ** | ||||||
7160826-C-A | 7292785-C-A | ** | ||||||
7185326-A-T | 7317285-A-T | ** | ||||||
7223135-C-A | 7355094-C-A | ** | ||||||
7239512-C-A | 7371471-C-A | ** | ||||||
7240853-C-A | 7372812-C-A | ** | ||||||
7241981-G-C | 7373940-G-C | ** | ||||||
7306645-G-A | 7438604-G-A | ** | ||||||
7311843-G-T | 7443802-G-T | ** | ||||||
7320110-C-A | 7452069-C-A | ** | ||||||
7348659-T-G | 7480618-T-G | ** | ||||||
7348793-C-A | 7480752-C-A | ** | ||||||
7362640-A-C | 7494599-A-C | ** | ||||||
7371738-C-A | 7503697-C-A | ** | ||||||
7448645-T-C | 7580604-T-C | IR1_L | ** | |||||
7535901-G-A | 7667860-G-A | ** | ||||||
7535902-G-T | 7667861-G-T | ** | ||||||
7535906-A-G | 7667865-A-G | ** | ||||||
7535916-G-A | 7667875-G-A | ** | ||||||
7535921-T-C | 7667880-T-C | ** | ||||||
7541230-C-A | 7673189-C-A | ** | ||||||
7541385-G-A | 7673344-G-A | ** | ||||||
8080563-G-T | 8212522-G-T | ** | ||||||
8214116-G-T | 8346075-G-T | ** | ||||||
8288727-G-T | 8420686-G-T | ** | ||||||
8736534-T-G | 8868493-T-G | ** | ||||||
9111545-C-A | ** | |||||||
9077130-G-T | 9239521-G-T | ** | ||||||
9077198-T-G | 9239589-T-G | ** | ||||||
9929692-G-T | 10092083-G-T | ** | ||||||
9997893-C-A | 10160284-C-A | ** | ||||||
10655080-A-T | ** | |||||||
10662255-TCATC-T | ** | |||||||
10662268-TTTCCC-T | ** | |||||||
10676656-T-G | ** | |||||||
10752146-T-A | ** | |||||||
10752151-T-A | ** | |||||||
10756714-C-A | ** | |||||||
10765765-AC-A | ** | |||||||
10766504-T-A | ** | |||||||
10780206-A-G | ** | |||||||
10780380-T-C | ** | |||||||
10782363-G-T | ** | |||||||
10793637-C-A | ** | |||||||
10796445-C-A | ** | |||||||
10798344-TCC-T | ** | |||||||
10799160-T-C | FT268634 | ** | ||||||
10799164-C-A | ** | |||||||
10799185-T-C | ** | |||||||
10799210-C-G | ** | |||||||
10799214-T-A | ** | |||||||
10799225-T-C | ** | |||||||
10799227-T-C | ** | |||||||
10801085-C-A | ** | |||||||
10804580-T-G | ** | |||||||
10804585-T-A | ** | |||||||
10804591-T-A | ** | |||||||
10824231-C-A | ** | |||||||
10824449-T-G | ** | |||||||
10828664-T-A | ** | |||||||
10833308-T-A | ** | |||||||
10837813-T-G | ** | |||||||
10842341-T-G | ** | |||||||
10847404-A-T | ** | |||||||
10850481-A-C | ** | |||||||
10862735-T-C | ** | |||||||
10866007-C-CACTCT | ** | |||||||
10875535-C-A | ** | |||||||
10875992-A-T | ** | |||||||
10880357-C-A | ** | |||||||
10881165-T-G | ** | |||||||
10890184-T-A | ** | |||||||
10905103-G-T | ** | |||||||
10912434-C-A | ** | |||||||
10917242-C-A | ** | |||||||
10920104-A-G | ** | |||||||
10935522-C-CATTCCATTCT | ** | |||||||
10939374-C-A | ** | |||||||
10942775-C-A | ** | |||||||
10946602-T-A | ** | |||||||
10948173-C-A | ** | |||||||
10956356-T-A | ** | |||||||
10970872-C-A | FT165228 | ** | ||||||
10972373-CAA-C | ** | |||||||
10972382-T-A | ** | |||||||
10976022-C-A | ** | |||||||
10976043-A-C | ** | |||||||
10976047-C-A | ** | |||||||
10979495-C-G | ** | |||||||
10979501-A-T | ** | |||||||
10979702-C-A | FT438996 | ** | ||||||
10985136-T-A | ** | |||||||
10985147-T-A | ** | |||||||
10988345-C-A | ** | |||||||
10991581-G-A | ** | |||||||
10991790-C-A | ** | |||||||
10994374-C-A | ** | |||||||
10997368-G-A | FT439715 | ** | ||||||
10997828-C-A | ** | |||||||
10998013-C-A | ** | |||||||
10998025-A-T | ** | |||||||
11015606-C-A | ** | |||||||
11025291-T-G | ** | |||||||
11027091-GTCCAT-G | ** | |||||||
11027103-C-A | ** | |||||||
11028182-T-G | ** | |||||||
11028183-G-A | ** | |||||||
11029927-C-A | ** | |||||||
11030104-C-G | ** | |||||||
11030114-C-T | ** | |||||||
11030168-C-A | ** | |||||||
11030657-C-T | ** | |||||||
11033158-C-CA | ** | |||||||
13199187-ACT-A | 11043511-ACT-A | ** | ||||||
13213971-T-G | 11058295-T-G | ** | ||||||
13223692-G-A | 11068016-G-A | ** | ||||||
13223709-GGA-G | 11068033-GGA-G | ** | ||||||
13255485-T-G | 11099809-T-G | ** | ||||||
13417308-G-T | 11261632-G-T | FT92383 | ** | |||||
13468217-G-A | 11312541-G-A | ** | ||||||
13495838-T-A | 11340162-T-A | ** | ||||||
13527690-G-A | 11372014-G-A | ** | ||||||
13554115-T-A | 11398439-T-A | ** | ||||||
13566991-ATTTT-A | 11411315-ATTTT-A | 17×T | ** | |||||
13630610-T-G | 11474934-T-G | ** | ||||||
13642181-C-A | 11486505-C-A | ** | ||||||
13713948-A-T | 11558272-A-T | ** | ||||||
11643684-G-ATCA | ** | |||||||
11657525-A-C | ** | |||||||
11657695-A-C | ** | |||||||
11658461-T-A | ** | |||||||
11663031-C-A | ** | |||||||
11664177-C-A | ** | |||||||
11665337-A-C | ** | |||||||
13857235-T-A | 11736529-T-A | ** | ||||||
13860892-A-C | 11740186-A-C | ** | ||||||
13884176-T-A | 11763470-T-A | ** | ||||||
13894609-C-A | 11773903-C-A | ** | ||||||
13906463-G-C | 11785757-G-C | ** | ||||||
13910154-C-T | 11789448-C-T | ** | ||||||
13987181-A-C | 11866475-A-C | ** | ||||||
14195798-C-A | 12075092-C-A | ** | ||||||
14204469-G-T | 12083763-G-T | ** | ||||||
14246980-T-G | 12126274-T-G | ** | ||||||
14250551-A-T | 12129845-A-T | ** | ||||||
14344944-A-G | 12224239-A-G | ** | ||||||
14382061-G-C | 12261357-G-C | ** | ||||||
14446673-C-A | 12325946-C-A | ** | ||||||
14447186-C-A | 12326459-C-A | ** | ||||||
14468237-A-G | 12347506-A-G | ** | ||||||
14468247-G-T | 12347516-G-T | ** | ||||||
14474659-A-T | 12353928-A-T | ** | ||||||
14501132-T-A | 12389337-T-A | ** | ||||||
14531293-C-T | 12419494-C-T | ** | ||||||
14580973-T-G | 12469173-T-G | ** | ||||||
14605217-C-A | 12493419-C-A | FT293651 | ** | |||||
14672405-C-A | 12560471-C-A | ** | ||||||
14741663-G-T | 12629731-G-T | ** | ||||||
14743042-C-A | 12631110-C-A | ** | ||||||
14933566-C-CTTTT | 12821631-C-CTTTT | 16×T | ** | |||||
14988918-T-G | 12876984-T-G | ** | ||||||
15111535-A-C | 12999622-A-C | ** | ||||||
15124063-C-A | 13012150-C-A | ** | ||||||
15168741-C-A | 13056827-C-A | ** | ||||||
15334598-A-C | 13222716-A-C | ** | ||||||
15334620-T-A | 13222738-T-A | ** | ||||||
15398522-C-A | 13286642-C-A | ** | ||||||
15658139-T-G | 13546259-T-G | ** | ||||||
15677776-T-G | 13565896-T-G | ** | ||||||
15731123-C-A | 13619243-C-A | ** | ||||||
15731124-A-C | 13619244-A-C | ** | ||||||
15731228-T-A | 13619348-T-A | ** | ||||||
15741045-C-A | 13629165-C-A | ** | ||||||
15749153-A-C | 13637273-A-C | ** | ||||||
15816372-A-T | 13704492-A-T | ** | ||||||
16033474-C-A | 13921594-C-A | ** | ||||||
16271947-G-A | 14160067-G-A | ** | ||||||
16309058-A-G | 14197178-A-G | ** | ||||||
16309059-CA-C | 14197179-CA-C | ** | ||||||
16309099-G-T | 14197219-G-T | ** | ||||||
16309162-GTGAAC-G | 14197282-GTGAAC-G | ** | ||||||
16309177-C-T | 14197297-C-T | ** | ||||||
16309197-G-C | 14197317-G-C | ** | ||||||
16309203-G-A | 14197323-G-A | ** | ||||||
16336701-C-A | 14224821-C-A | ** | ||||||
16445675-C-A | 14333795-C-A | ** | ||||||
16490646-A-C | 14378766-A-C | ** | ||||||
16492932-G-T | 14381052-G-T | ** | ||||||
16559884-A-G | 14448004-A-G | ** | ||||||
16628663-C-A | 14516783-C-A | ** | ||||||
16717383-T-A | 14605503-T-A | ** | ||||||
16943472-A-G | 14831592-A-G | ** | ||||||
17103763-C-T | 14991883-C-T | ** | ||||||
17196436-T-C | 15084556-T-C | ** | ||||||
17215767-G-T | 15103887-G-T | ** | ||||||
17270466-A-T | 15158586-A-T | ** | ||||||
17270508-C-A | 15158628-C-A | ** | ||||||
17276171-C-A | 15164291-C-A | ** | ||||||
17338471-C-A | 15226591-C-A | ** | ||||||
17382481-G-A | 15270601-G-A | ** | ||||||
17486308-G-T | 15374428-G-T | ** | ||||||
17545965-G-T | 15434085-G-T | ** | ||||||
17794304-T-A | 15682424-T-A | ** | ||||||
17831150-C-A | 15719270-C-A | ** | ||||||
17840047-C-T | 15728167-C-T | ** | ||||||
18085522-A-G | 15973642-A-G | ** | ||||||
18143780-T-G | 16031900-T-G | ** | ||||||
18158275-A-C | 16046395-A-C | ** | ||||||
18186333-C-A | 16074453-C-A | ** | ||||||
18188243-C-A | 16076363-C-A | ** | ||||||
18293227-A-T | 16181347-A-T | P6_Prx | ** | |||||
18293233-A-T | 16181353-A-T | P6_Prx | ** | |||||
18316620-T-A | 16204740-T-A | P6_Prx | ** | |||||
18316622-TCTG-T | 16204742-TCTG-T | P6_Prx | ** | |||||
18316634-G-T | 16204754-G-T | P6_Prx | ** | |||||
18340865-A-C | 16228985-A-C | P6_Prx | ** | |||||
18915175-C-A | 16803295-C-A | ** | ||||||
18990362-C-A | 16878482-C-A | ** | ||||||
19071768-C-A | 16959888-C-A | ** | ||||||
19078999-G-C | 16967119-G-C | ** | ||||||
19244902-T-G | 17133022-T-G | ** | ||||||
19245045-C-A | 17133165-C-A | ** | ||||||
19250664-GTTTTTTTTTTTTTTTTTTTTTTTTT-G | 17138784-GTTTTTTTTTTTTTTTTTTTTTTTTT-G | 45×T | ** | |||||
19318308-G-T | 17206428-G-T | ** | ||||||
19464157-C-T | 17352277-C-T | ** | ||||||
19529334-C-A | 17417454-C-A | ** | ||||||
19563205-T-G | 17451325-T-G | ** | ||||||
19600524-T-G | 17488644-T-G | P5_Prx | ** | |||||
19600536-A-T | 17488656-A-T | P5_Prx | ** | |||||
19600605-C-A | 17488725-C-A | P5_Prx | ** | |||||
19601084-A-C | 17489204-A-C | P5_Prx | ** | |||||
19699799-T-G | 17587919-T-G | P5_Prx | ** | |||||
19740977-C-A | 17629097-C-A | P5_Prx | ** | |||||
19950116-A-T | 17838236-A-T | P5_Prx | ** | |||||
19950154-A-T | 17838274-A-T | P5_Prx | ** | |||||
19950157-A-T | 17838277-A-T | P5_Prx | ** | |||||
20019156-C-A | 17907276-C-A | P5_Prx | ** | |||||
20027953-T-G | 17916073-T-G | P5_Prx | ** | |||||
20048162-T-TC | 17936282-T-TC | P5_Prx | ** | |||||
20078924-A-C | 17967044-A-C | P5_Dst | ** | |||||
20101651-T-C | 17989771-T-C | P5_Dst | ** | |||||
20342096-T-A | 18180210-T-A | P5_Dst | ** | |||||
20342102-T-A | 18180216-T-A | P5_Dst | ** | |||||
20342109-T-A | 18180223-T-A | P5_Dst | ** | |||||
20342115-T-A | 18180229-T-A | P5_Dst | ** | |||||
20625972-C-G | 18464086-C-G | P4_Prx | ** | |||||
20625973-A-T | 18464087-A-T | P4_Prx | ** | |||||
20625976-A-T | 18464090-A-T | P4_Prx | ** | |||||
20625988-A-T | 18464102-A-T | P4_Prx | ** | |||||
20625990-A-T | 18464104-A-T | P4_Prx | ** | |||||
20626001-C-A | 18464115-C-A | P4_Prx | ** | |||||
20651677-T-C | 18489791-T-C | P4_Prx | ** | |||||
20775125-T-A | 18613239-T-A | P4_Prx | ** | |||||
20775199-T-A | 18613313-T-A | P4_Prx | ** | |||||
20775200-C-A | 18613314-C-A | P4_Prx | ** | |||||
20792455-A-T | 18630569-A-T | P4_Prx | ** | |||||
20809408-A-C | 18647522-A-C | P4_Gap | ** | |||||
20815591-C-A | 18653705-C-A | P4_Gap | ** | |||||
20943464-G-T | 18781578-G-T | P4_Dst | ** | |||||
21416555-A-T | 19254669-A-T | ** | ||||||
21513876-C-A | 19351990-C-A | ** | ||||||
21522339-C-A | 19360453-C-A | ** | ||||||
21583693-C-A | 19421807-C-A | ** | ||||||
21677172-C-A | 19515286-C-A | ** | ||||||
21738496-C-A | 19576610-C-A | ** | ||||||
21803211-C-A | 19641325-C-A | ** | ||||||
21974726-T-TA | 19812840-T-TA | ** | ||||||
22114692-C-A | 19952806-C-A | ** | ||||||
22146696-T-G | 19984810-T-G | ** | ||||||
22169313-G-T | 20007427-G-T | ** | ||||||
22198796-T-G | 20036910-T-G | ** | ||||||
22245476-C-A | 20083590-C-A | DYZ19 | ** | |||||
22246913-C-G | 20085027-C-G | DYZ19 | ** | |||||
22436223-C-A | 20274337-C-A | DYZ19 | ** | |||||
22564622-A-T | 20402736-A-T | ** | ||||||
22644697-A-C | 20482811-A-C | ** | ||||||
23044130-C-A | 20882244-C-A | ** | ||||||
23044142-T-A | 20882256-T-A | ** | ||||||
23047687-C-A | 20885801-C-A | ** | ||||||
23062758-C-A | 20900872-C-A | ** | ||||||
23066708-T-A | 20904822-T-A | ** | ||||||
23086319-G-T | 20924433-G-T | ** | ||||||
23144213-C-A | 20982327-C-A | ** | ||||||
23261272-A-C | 21099386-A-C | ** | ||||||
23316011-G-T | 21154125-G-T | ** | ||||||
23340718-C-A | 21178832-C-A | ** | ||||||
24389798-C-A | 22243651-C-A | ** | ||||||
24416971-C-A | 22270824-C-A | ** | ||||||
24512535-T-A | 22366388-T-A | ** | ||||||
24643317-TC-T | 22497170-TC-T | P3_t2 | ** | |||||
25572215-C-A | 23426068-C-A | P1_gr1 | ** | |||||
25719219-T-A | 23573072-T-A | P1_b3 | ** | |||||
26018411-G-T | 23872264-G-T | P1_Y1 | ** | |||||
26064009-T-G | 23917862-T-G | P1_Y1 | ** | |||||
26064115-T-G | 23917968-T-G | P1_Y1 | ** | |||||
26170543-G-GAAGAAT | 24024396-G-GAAGAAT | P1_Y1 | ** | |||||
26181793-C-A | 24035646-C-A | P1_Y1 | ** | |||||
26181801-G-C | 24035654-G-C | P1_Y1 | ** | |||||
26181856-C-A | 24035709-C-A | P1_Y1 | ** | |||||
26249050-A-C | 24102903-A-C | P1_Y1 | ** | |||||
28500876-G-T | 26354729-G-T | ** | ||||||
28633192-C-A | 26487045-C-A | ** | ||||||
28667352-C-A | 26521205-C-A | ** | ||||||
28690132-T-G | 26543985-T-G | ** | ||||||
28690231-T-A | 26544084-T-A | ** | ||||||
28703997-C-A | 26557850-C-A | ** | ||||||
28797845-A-C | 26651698-A-C | ** | ||||||
56830170-T-A | ** | |||||||
56830175-T-C | ** | |||||||
56840399-T-A | ** | |||||||
56843693-C-A | ** | |||||||
56850998-G-T | ** | |||||||
56875122-G-T | ** | |||||||
56879581-C-A | ** | |||||||
11614-C-G | ** | |||||||
30965-A-T | ** | |||||||
31473-C-A | ** | |||||||
31523-C-A | ** | |||||||
10683222-A-G | *** | |||||||
10744375-A-C | *** | |||||||
21515862-CAAA-C | 19353976-CAAA-C | 28×A | *** | |||||
10988622-T-A | *** | |||||||
16590873-C-CAA | 14478993-C-CAA | 17×A | *** | |||||
17323544-A-T | 15211664-A-T | *** | ||||||
10657372-C-CTCCAT | *** | |||||||
15904149-CA-C,CAA | 13792269-CA-C,CAA | 20×A | *** | |||||
16410034-C-A | 14298154-C-A | *** | ||||||
2979296-CTTTT-C,CTTT | 3111255-CTTTT-C,CTTT | 15×T | *** | |||||
13328863-C-A | 11173187-C-A | *** | ||||||
10683332-G-A,C | *** | |||||||
10999881-T-TTTGAG | *** | |||||||
21985133-C-A | 19823247-C-A | *** | ||||||
10884485-T-A | *** | |||||||
6652406-C-CA | 6784365-C-CA | 8×A | *** | |||||
2813882-T-C | 2945841-T-C | *** | ||||||
2970336-GGTGTGTGTGTGTGT-G | 3102295-GGTGTGTGTGTGTGT-G | 18×GT | *** | |||||
7414277-CAAAAA-C | 7546236-CAAAAA-C | 27×A | *** | |||||
8282301-C-A | 8414260-C-A | *** | ||||||
10799626-A-T | *** | |||||||
10884468-C-G | *** | |||||||
10911977-A-G | *** | |||||||
10949243-C-A | *** | |||||||
11672615-A-G | *** | |||||||
14834723-C-A | 12722790-C-A | *** | ||||||
15761954-A-G | 13650074-A-G | *** | ||||||
16614717-C-A | 14502837-C-A | *** | ||||||
17997312-T-G | 15885432-T-G | P7_Gap | *** | |||||
19006136-CA-C,CAA | 16894256-CA-C,CAA | 21×A | *** | |||||
19131782-A-G | 17019902-A-G | *** | ||||||
21094958-C-A | 18933072-C-A | *** | ||||||
21884637-C-A | 19722751-C-A | *** | ||||||
22526291-CTATGAACAAATA-C | 20364405-CTATGAACAAATA-C | *** | ||||||
22551516-T-A | 20389630-T-A | *** | ||||||
23818163-G-T | 21656277-G-T | *** | ||||||
56846833-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.