Tree Position

A0-T-YP2191 > P305 > L413/PF1409/V31 > M168/PF1416 > P143 > M89/PF2746 > F1329/M3658 > F929 > IJK > K > P295 > M207 > M173 > L146/M420 > M459 > M198 > M417 > Z645 > Z283 > Z282 > Z280 > CTS1211 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
331278
28817723-C-T 26671576-C-T A*
25946565-A-AT 23800418-A-AT P1_Y1 9×TA*
13718903-A-C 11563227-A-C A*
13718895-G-A 11563219-G-A A*
26053532-G-GT 23907385-G-GT P1_Y1 9×TA*
13695028-A-G 11539352-A-G A*
13450192-C-T 11294516-C-T A*
13712803-C-G 11557127-C-G A*
13718856-G-A 11563180-G-A A*
26012907-G-GA 23866760-G-GA P1_Y1 9×AA*
28815329-T-G 26669182-T-G 4×AATGGA*
20041945-A-G 17930065-A-G P5_Prx A*
13718853-C-G 11563177-C-G A*
19653450-T-TA 17541570-T-TA P5_Prx 9×AA*
19934665-A-AT 17822785-A-AT P5_Prx 9×TA*
28587750-C-A 26441603-C-A A*
19728331-A-AT 17616451-A-AT P5_Prx 10×TA*
28817658-G-C 26671511-G-C A*
25918856-C-CT 23772709-C-CT P1_Y1 10×TA*
20041932-A-C 17930052-A-C P5_Prx A*
13712782-T-C 11557106-T-C A*
19597202-T-TTTA 17485322-T-TTTA P5_Prx 12×TTAA*
28816331-A-G 26670184-A-G A*
13489159-G-A 11333483-G-A A*
28817424-A-T 26671277-A-T A*
13695004-G-T 11539328-G-T A*
20497373-C-CCTTT 18335487-C-CCTTT P5_Dst 12×CTTTA*
16298499-G-GATAA 14186619-G-GATAA 11×ATAA*
14025562-A-AAAAGAAAGAAAGAAAGAAAG 11904856-A-AAAAGAAAGAAAGAAAGAAAG 12×AAAG*
8906495-A-AT 9038454-A-AT 11×T*
13718238-C-G 11562562-C-G *
21417803-T-C 19255917-T-C **
21856493-C-T 19694607-C-T **
8216559-C-A 8348518-C-A **
8349316-CCAGGGT-C 8481275-CCAGGGT-C **
8637447-G-T 8769406-G-T **
21824674-G-T 19662788-G-T **
8826461-C-A 8958420-C-A **
8720177-G-T 8852136-G-T **
8735781-G-A 8867740-G-A **
21888002-A-G 19726116-A-G **
9056288-C-T **
13207608-G-T 11051932-G-T **
9184302-T-C 9346693-T-C **
9382347-C-T 9544738-C-T **
21340232-C-A 19178346-C-A **
11026089-A-T **
8046412-T-A 8178371-T-A **
7753072-T-C 7885031-T-C **
7757019-T-C 7888978-T-C **
13229541-T-G 11073865-T-G **
7254273-T-C 7386232-T-C **
7306721-A-AAT 7438680-A-AAT **
7306731-T-C 7438690-T-C **
7321913-T-G 7453872-T-G **
13233600-C-A 11077924-C-A **
7422315-G-A 7554274-G-A **
7572895-A-T 7704854-A-T **
7590743-C-A 7722702-C-A **
13217827-A-G 11062151-A-G **
21984113-C-A 19822227-C-A **
7656906-T-C 7788865-T-C **
7664403-C-A 7796362-C-A **
7753046-T-C 7885005-T-C **
11022680-C-A **
7755006-G-T 7886965-G-T **
7756968-C-A 7888927-C-A **
9462269-C-G 9624660-C-G **
9975113-A-T 10137504-A-T **
9499455-G-T 9661846-G-T **
10845639-T-G **
10782774-C-G **
10787382-C-A **
10808569-T-C **
11011956-A-T **
10808631-C-A **
10825491-A-G **
10830693-T-C **
10857841-T-A **
10769765-C-G **
10879555-T-C **
10999077-C-A **
10969482-C-A **
10892806-A-G **
10934311-C-A **
10969471-T-A **
10936766-C-A **
10777568-C-A **
10763130-C-T **
9702804-T-G 9865195-T-G IR3_Prx **
10068125-C-G 10230516-C-G **
9927309-G-A 10089700-G-A FGC8030 **
9945200-G-T 10107591-G-T **
10946550-A-C **
9983078-C-A 10145469-C-A **
10018344-G-A 10180735-G-A **
10050814-T-A 10213205-T-A **
10068118-G-T 10230509-G-T **
10648154-C-G **
10746967-C-CTGTTT **
10661264-C-G **
10661372-C-A **
10664613-T-C **
21353347-A-G 19191461-A-G **
10686043-C-A **
21490978-C-A 19329092-C-A **
10746929-A-G **
21615948-T-C 19454062-T-C **
4523838-T-C 4655797-T-C **
7238007-C-T 7369966-C-T **
16157735-G-A 14045855-G-A P8_Dst 10×AAAGA**
4177988-A-G 4309947-A-G **
4228073-G-C 4360032-G-C **
4245314-C-A 4377273-C-A **
4255288-C-A 4387247-C-A **
4401543-G-T 4533502-G-T **
4465981-C-A 4597940-C-A **
4473905-C-A 4605864-C-A **
4516158-G-T 4648117-G-T **
4528010-A-T 4659969-A-T **
4010166-C-A 4142125-C-A **
4551562-A-G 4683521-A-G **
4569446-G-T 4701405-G-T **
4594641-G-T 4726600-G-T **
4604911-G-A 4736870-G-A **
4630668-G-T 4762627-G-T **
4635683-A-G 4767642-A-G **
4686715-T-C 4818674-T-C **
4686771-G-C 4818730-G-C **
4077356-GA-G 4209315-GA-G **
3989833-T-G 4121792-T-G **
4703675-C-T 4835634-C-T **
3641452-G-C 3773411-G-C **
3214127-G-T 3346086-G-T **
3231831-C-A 3363790-C-A **
3256443-C-A 3388402-C-A **
3279424-T-C 3411383-T-C **
3343849-C-G 3475808-C-G **
3350599-A-G 3482558-A-G **
3361461-G-T 3493420-G-T **
3361461-G-GT 3493420-G-GT **
3649262-C-A 3781221-C-A **
3950266-C-G 4082225-C-G **
3651372-C-A 3783331-C-A **
3697085-G-A 3829044-G-A **
3726726-A-C 3858685-A-C **
3758757-A-G 3890716-A-G **
3831521-C-A 3963480-C-A **
3853471-T-A 3985430-T-A **
3909175-G-T 4041134-G-T **
3941181-C-A 4073140-C-A **
4686811-C-T 4818770-C-T **
4713107-G-T 4845066-G-T **
7231186-C-A 7363145-C-A **
7011616-C-A 7143575-C-A **
6698918-G-C 6830877-G-C **
6698923-C-T 6830882-C-T BY49857BY177775 **
6699004-G-C 6830963-G-C **
6712065-C-A 6844024-C-A **
6714633-A-G 6846592-A-G **
6736345-C-A 6868304-C-A **
21993931-T-C 19832045-T-C **
6831222-G-A 6963181-G-A **
7044694-A-G 7176653-A-G **
6610593-G-T 6742552-G-T **
7094556-A-G 7226515-A-G **
7100715-A-G 7232674-A-G **
7107661-C-A 7239620-C-A **
7164067-C-A 7296026-C-A **
7179820-C-A 7311779-C-A **
7196244-C-A 7328203-C-A **
7201404-C-G 7333363-C-G **
7225344-C-A 7357303-C-A **
6619614-T-C 6751573-T-C **
6510475-G-A 6642434-G-A **
4733453-A-G 4865412-A-G **
5294490-G-T 5426449-G-T **
4806273-C-A 4938232-C-A **
4896325-C-A 5028284-C-A **
5036152-G-T 5168111-G-T **
5059670-C-A 5191629-C-A **
5095477-C-A 5227436-C-A **
5220061-G-A 5352020-G-A **
5242662-C-A 5374621-C-A **
5293596-C-A 5425555-C-A **
21996140-T-C 19834254-T-C **
6457074-G-GT 6589033-G-GT 9×T**
5495297-A-G 5627256-A-G **
5513561-A-C 5645520-A-C **
5561098-A-G 5693057-A-G **
5660331-C-A 5792290-C-A **
5858587-C-A 5990546-C-A **
5888248-A-G 6020207-A-G **
5967403-T-A 6099362-T-A **
6036221-G-A 6168180-G-A **
6429720-G-T 6561679-G-T **
7150743-G-A 7282702-G-A **
13484005-C-A 11328329-C-A **
13235022-T-C 11079346-T-C **
17115013-T-C 15003133-T-C **
20352411-T-G 18190525-T-G P5_Dst **
16842867-ATGTGTG-A 14730987-ATGTGTG-A 22×TG**
16952683-C-A 14840803-C-A **
16972002-C-A 14860122-C-A **
17014589-C-T 14902709-C-T **
17041906-C-A 14930026-C-A **
17041909-C-A 14930029-C-A **
20350294-C-T 18188408-C-T P5_Dst **
17130267-A-C 15018387-A-C **
16689642-C-A 14577762-C-A **
17142202-CCCTG-C 15030322-CCCTG-C **
17214749-C-A 15102869-C-A **
17215647-A-C 15103767-A-C **
17246906-T-C 15135026-T-C **
17254714-G-T 15142834-G-T **
17313596-T-A 15201716-T-A **
17353679-A-C 15241799-A-C **
17366833-T-C 15254953-T-C **
20526320-T-TA 18364434-T-TA P5_Dst **
16673251-G-C 14561371-G-C **
19904673-C-G 17792793-C-G P5_Prx **
16053618-G-T 13941738-G-T **
15912055-C-CTTT 13800175-C-CTTT 21×T**
15936997-TG-T 13825117-TG-T **
15986693-G-T 13874813-G-T **
15986704-T-C 13874824-T-C **
15986709-T-C 13874829-T-C **
15986712-C-A 13874832-C-A **
15986715-C-G 13874835-C-G **
16042748-C-A 13930868-C-A **
16062140-C-A 13950260-C-A **
16668182-C-A 14556302-C-A **
20654255-A-AG 18492369-A-AG P4_Prx **
16297051-T-C 14185171-T-C **
16344617-T-C 14232737-T-C **
16362376-C-A 14250496-C-A **
16411237-T-A 14299357-T-A **
16614692-G-T 14502812-G-T **
16614730-G-A 14502850-G-A **
16617782-G-T 14505902-G-T **
19904691-T-G 17792811-T-G P5_Prx **
17455851-C-A 15343971-C-A **
15776179-GA-G 13664299-GA-G **
19792510-A-C 17680630-A-C P5_Prx **
18619079-C-A 16507199-C-A **
18753364-G-T 16641484-G-T **
18937480-C-A 16825600-C-A **
19792585-C-A 17680705-C-A P5_Prx **
19044642-G-A 16932762-G-A **
19052413-TC-T 16940533-TC-T **
19290882-C-A 17179002-C-A **
19303624-A-G 17191744-A-G **
19701512-A-T 17589632-A-T P5_Prx **
18540461-G-C 16428581-G-C **
19431514-C-A 17319634-C-A **
19438395-A-G 17326515-A-G **
19455860-C-A 17343980-C-A **
19460152-G-T 17348272-G-T **
19461960-G-T 17350080-G-T **
19465811-C-A 17353931-C-A **
19532854-C-T 17420974-C-T **
19653669-G-T 17541789-G-T P5_Prx **
18564999-A-G 16453119-A-G **
18539390-G-A 16427510-G-A **
17481328-C-T 15369448-C-T **
17730458-A-G 15618578-A-G **
17492377-C-A 15380497-C-A **
17497057-G-A 15385177-G-A **
17545625-A-C 15433745-A-C **
17601073-G-A 15489193-G-A **
19904661-C-G 17792781-C-G P5_Prx **
17648567-T-A 15536687-T-A **
17653975-T-C 15542095-T-C **
17730386-A-G 15618506-A-G **
17813490-C-A 15701610-C-A **
19844976-G-T 17733096-G-T P5_Prx **
17876388-C-A 15764508-C-A FGC29812 **
18054830-C-G 15942950-C-G **
18071874-T-G 15959994-T-G **
18135709-T-C 16023829-T-C **
18159675-C-T 16047795-C-T **
19871617-A-C 17759737-A-C P5_Prx **
18196359-T-A 16084479-T-A **
19860854-G-GGT 17748974-G-GGT P5_Prx **
15905917-G-T 13794037-G-T **
15742264-C-A 13630384-C-A **
13236199-C-A 11080523-C-A **
14036871-A-G 11916165-A-G **
21153581-T-C 18991695-T-C **
13801228-A-C 11680522-A-C **
13833390-G-A 11712684-G-A **
13896337-G-A 11775631-G-A **
13896904-T-A 11776198-T-A **
13975847-C-G 11855141-C-G **
14029276-C-A 11908570-C-A **
14033883-A-C 11913177-A-C **
14039411-T-C 11918705-T-C **
11652915-G-C **
14073445-T-C 11952739-T-C **
14122281-G-T 12001575-G-T **
14175554-G-A 12054848-G-A **
14177941-A-G 12057235-A-G **
14191194-G-A 12070488-G-A **
14194759-C-A 12074053-C-A **
14219663-T-C 12098957-T-C **
14224182-C-A 12103476-C-A **
11665125-T-A **
11651141-G-T **
14274116-A-G 12153410-A-G **
3103596-G-T 3235555-G-T **
13242753-C-A 11087077-C-A **
13298089-A-C 11142413-A-C **
13330172-A-G 11174496-A-G **
13330173-G-T 11174497-G-T **
13402634-C-T 11246958-C-T **
13478198-C-G 11322522-C-G **
21334697-C-A 19172811-C-A **
21325819-C-A 19163933-C-A **
21187391-C-A 19025505-C-A **
11646337-T-C **
21182509-T-A 19020623-T-A **
13485355-G-C 11329679-G-C **
13525180-C-A 11369504-C-A **
13559427-G-T 11403751-G-T **
13565639-A-G 11409963-A-G **
13588438-T-C 11432762-T-C **
13590175-G-T 11434499-G-T **
13644104-C-G 11488428-C-G **
14229852-C-A 12109146-C-A **
14293583-G-A 12172877-G-A **
15717938-C-A 13606058-C-A **
15402487-C-A 13290607-C-A **
15189741-C-A 13077827-C-A **
15201610-C-G 13089696-C-G **
15202184-C-A 13090270-C-A **
15210968-C-T 13099054-C-T **
15235494-C-A 13123580-C-A **
15366099-G-A 13254219-G-A **
15397460-A-C 13285580-A-C **
15398256-T-G 13286376-T-G **
15500733-C-T 13388853-C-T **
15106916-T-C 12995003-T-C **
15500748-C-A 13388868-C-A **
15515310-A-G 13403430-A-G **
15604190-C-A 13492310-C-A **
15608160-C-A 13496280-C-A **
15608181-A-T 13496301-A-T **
15684198-C-A 13572318-C-A **
15687645-A-C 13575765-A-C **
15700473-A-G 13588593-A-G **
15178572-A-C 13066658-A-C **
15080620-G-T 12968710-G-T **
14295251-C-T 12174545-C-T **
14533569-C-A 12421770-C-A **
14299779-C-A 12179073-C-A **
14378001-T-A 12257297-T-A **
14446652-A-G 12325925-A-G **
14447581-C-A 12326854-C-A **
14471776-G-T 12351045-G-T **
14471860-A-T 12351129-A-T **
21152150-A-G 18990264-A-G **
14529182-C-A 12417383-C-A **
14551443-C-T 12439644-C-T **
15061665-G-A 12949757-G-A **
14558393-C-A 12446594-C-A **
14558465-C-A 12446666-C-A **
14627069-T-C 12515137-T-C **
14687646-G-C 12575712-G-C **
14693507-C-A 12581573-C-A **
21012093-A-G 18850207-A-G P4_Dst **
14988856-A-T 12876922-A-T **
15049354-T-C 12937445-T-C **
3158886-C-A 3290845-C-A **
5967475-C-A 6099434-C-A **
3065834-T-C 3197793-T-C **
10663334-C-G **
14848913-CTTT-C 12736979-CTTT-C 14×T**
21412261-CT-C 19250375-CT-C 36×T**
21754480-C-T **
21754487-T-A **
17317417-T-A 15205537-T-A **
16989198-C-A 14877318-C-A **
10663328-C-T **
27824064-T-TC 25677917-T-TC P1_Y2 **
13474089-C-T 11318413-C-T **
9462044-G-T 9624435-G-T **
27127546-C-G 24981399-C-G P1_g3 **
22520589-C-A 20358703-C-A **
56824032-A-G **
10903456-G-T **
10903480-C-A **
10903497-C-A **
10903502-T-A **
27872941-T-G 25726794-T-G P1_Y2 **
28103923-T-G 25957776-T-G P1_Y2 **
58989949-G-C 56843802-G-C **
28529697-A-G 26383550-A-G **
10770704-G-T **
10770729-A-T **
10770731-TCCTTTTC-T **
6918534-TC-T 7050493-TC-T **
28545927-C-A 26399780-C-A 8×A**
14473679-C-A 12352948-C-A **
21491127-C-A 19329241-C-A **
28539586-T-TA 26393439-T-TA 19×A**
13460514-C-A 11304838-C-A A17111 **
10821814-T-C **
6714654-C-A 6846613-C-A **
10755319-A-C **
10764166-C-T **
13200459-C-A 11044783-C-A **
28493601-C-A 26347454-C-A **
28103942-C-G 25957795-C-G P1_Y2 **
15816587-C-A 13704707-C-A **
58883683-C-T 56707188-G-A **
13448796-C-CTCCACTCCACTCCAG 11293120-C-CTCCACTCCACTCCAG **
10887976-C-A **
10763150-C-T BY83778 **
10949437-G-C **
13435680-G-T 11280004-G-T **
11017489-C-A **
11035429-C-T **
18825649-A-T 16713769-A-T **
10763132-A-T **
13478205-A-T 11322529-A-T A15569 **
10763144-T-A **
24876988-G-A 22730841-G-A g1 **
21315158-TG-T 19153272-TG-T **
15111419-C-A 12999506-C-A **
24836802-G-T 22690655-G-T P3_b2 **
7383768-A-G 7515727-A-G **
13194735-C-A 11039059-C-A **
11022028-C-T **
10685781-C-G **
10830941-C-A **
19059859-A-T 16947979-A-T **
22962008-GTT-G 20800122-GTT-G 27×T**
21315156-C-T 19153270-C-T **
10887982-C-T **
10770675-C-G **
10887995-T-C **
10888006-C-A **
10888016-C-G **
10887946-C-T **
13255937-C-A 11100261-C-A **
56860994-G-A **
6771579-C-A 6903538-C-A **
25994029-A-G 23847882-A-G P1_Y1 **
10688014-C-T **
25964917-T-C 23818770-T-C P1_Y1 **
8293040-C-A 8424999-C-A **
28498046-C-A 26351899-C-A **
4235720-G-A 4367679-G-A **
26563208-A-G 24417061-A-G P1_g2 **
26355470-C-A 24209323-C-A P1_Y1 **
16150948-TAAA-T 14039068-TAAA-T P8_Dst 22×A**
10688019-C-T **
10688023-T-A **
28586529-C-A 26440382-C-A **
10763316-C-CACTGT **
3050023-C-A 3181982-C-A **
58990046-A-C 56843899-A-C **
28758005-C-A 26611858-C-A **
58985631-T-G 56839484-T-G **
28754927-T-A 26608780-T-A **
28720251-T-C 26574104-T-C **
13466333-C-T 11310657-C-T **
13559410-A-G 11403734-A-G FGC18012 **
28720228-C-T 26574081-C-T **
58989963-C-T 56843816-C-T **
2790303-CTTTT-C 2922262-CTTTT-C 15×T**
58989990-A-G 56843843-A-G **
58990005-T-A 56843858-T-A **
15410620-T-G 13298740-T-G **
23801720-T-A 21639834-T-A **
13471112-C-A 11315436-C-A **
13705474-AGGAATGGAATGGAATGGAAT-A 11549798-AGGAATGGAATGGAATGGAAT-A 10×GGAAT**
58985582-T-G 56839435-T-G **
17136965-A-T 15025085-A-T **
18928479-A-C 16816599-A-C **
13471124-G-A 11315448-G-A **
58972106-A-T 56825959-A-T **
56835383-T-A **
22439445-T-C 20277559-T-C DYZ19 **
26991333-T-TA 24845186-T-TA P1_r4 33×A**
56856418-G-T **
58979307-CCATTG-C 56833160-CCATTG-C **
24643271-G-T 22497124-G-T P3_t2 **
17997565-T-C 15885685-T-C Z2980Z2980 S6154 P7_Gap **
18365613-A-AT 16253733-A-AT P6_Prx 11×T**
56850556-A-G **
9537704-CTG-C 9700095-CTG-C IR3_Prx 8×TG**
28767170-C-A 26621023-C-A **
56833192-A-G **
56827296-C-A **
20511008-A-T 18349122-A-T P5_Dst **
28802620-A-T 26656473-A-T **
28802577-T-G 26656430-T-G **
7401140-A-AT 7533099-A-AT 14×T**
22352981-G-T 20191095-G-T DYZ19 **
13865679-C-G 11744973-C-G **
20511005-A-T 18349119-A-T P5_Dst **
58973307-T-C 56827160-T-C **
10763308-C-G **
56839474-A-T **
10768617-G-C **
14519570-G-GA 12407771-G-GA 11×A**
10761020-C-CTCCATTCCATTCCATTTCAA **
13466354-G-T 11310678-G-T **
28596791-C-T 26450644-C-T **
10887978-A-G **
56839426-T-C **
11014602-C-G **
10768591-C-T **
9930160-A-T 10092551-A-T **
6770010-C-A 6901969-C-A **
10935626-C-A **
23801717-G-A 21639831-G-A **
19394097-G-T 17282217-G-T **
11009196-A-T **
14575947-C-A 12464147-C-A Y37608 **
10763258-C-T **
10768615-T-G **
28659381-C-A 26513234-C-A **
59008768-C-CT 56862621-C-CT 14×T**
16437385-C-T 14325505-C-T FGC46883FGC46883 **
15424313-G-GA 13312433-G-GA 14×A**
17130400-CTT-C 15018520-CTT-C 21×T**
28708375-C-A 26562228-C-A **
28706299-T-C 26560152-T-C Y59977 **
14787758-GTATA-G 12675828-GTATA-G 10×TA**
20511012-C-T 18349126-C-T P5_Dst **
17713850-CT-C 15601970-CT-C 23×T**
23223291-G-C 21061405-G-C **
58982267-C-T 56836120-C-T **
11022033-C-T **
23223294-T-C 21061408-T-C **
3909109-C-CAA 4041068-C-CAA 22×A**
28675183-AT-A 26529036-AT-A **
27916420-C-A 25770273-C-A P1_Y2 **
21391590-T-TA 19229704-T-TA 12×A**
58979087-C-T 56832940-C-T **
5318305-C-A 5450264-C-A **
9930096-G-A 10092487-G-A **
24638018-TGC-T 22491871-TGC-T P3_t2 **
11026082-C-G **
14052795-G-A 11932089-G-A **
6934879-C-A 7066838-C-A **
18499929-A-AG 16388049-A-AG P6_Dst **
2795596-T-C 2927555-T-C **
23009290-C-A 20847404-C-A **
27033-C-A **
20771737-A-G 18609851-A-G P4_Prx **
6978394-C-A 7110353-C-A **
22997025-C-A 20835139-C-A **
18195246-A-T 16083366-A-T **
22076890-C-A 19915004-C-A **
22815019-C-A 20653133-C-A **
20884102-A-AG 18722216-A-AG P4_Dst **
21381948-C-A 19220062-C-A **
11652484-C-A **
10011119-G-T 10173510-G-T **
18239010-C-A 16127130-C-A **
8988481-GAC-G 9150872-GAC-G **
19871629-T-C 17759749-T-C P5_Prx **
14795122-A-C 12683193-A-C **
18924795-C-A 16812915-C-A **
14823695-C-A 12711762-C-A **
14187283-C-A 12066577-C-A **
22032604-C-A 19870718-C-A **
20622536-A-T 18460650-A-T P4_Prx **
23415298-ATGTATGTATGTATG-A 21253412-ATGTATGTATGTATG-A **
23399927-G-T 21238041-G-T **
23355666-T-A 21193780-T-A **
23138655-T-A 20976769-T-A **
23091516-C-A 20929630-C-A **
15617926-C-A 13506046-C-A **
18406862-C-A 16294982-C-A P6_Gap **
13326749-C-A 11171073-C-A **
23128024-C-A 20966138-C-A Y110710 **
21136832-C-A 18974946-C-A **
28741266-C-A 26595119-C-A **
19216416-C-A 17104536-C-A **
28508007-C-CAA 26361860-C-CAA 14×A**
13996340-C-A 11875634-C-A **
17782714-A-T 15670834-A-T **
14219662-T-C 12098956-T-C **
22249925-C-T 20088039-C-T DYZ19 **
5710570-C-A 5842529-C-A **
13705492-A-G 11549816-A-G **
10672419-C-A **
13605072-C-A 11449396-C-A **
22836544-C-T 20674658-C-T **
26355430-C-A 24209283-C-A P1_Y1 **
19699953-A-T 17588073-A-T P5_Prx **
22125682-CATT-C 19963796-CATT-C **
11652872-C-A **
21996134-A-C 19834248-A-C **
15986705-G-A 13874825-G-A **
17479975-C-A 15368095-C-A **
10868802-CCTTTT-C **
16932778-C-A 14820898-C-A **
2670405-T-G 2802364-T-G **
2772384-G-T 2904343-G-T **
2803609-C-T 2935568-C-T **
22056265-T-C 19894379-T-C **
2930553-A-G 3062512-A-G **
16039322-C-A 13927442-C-A **
22166682-G-A 20004796-G-A **
3284554-C-A 3416513-C-A **
10686889-T-A **
26066360-G-T 23920213-G-T P1_Y1 13×T**
22237220-A-C 20075334-A-C DYZ19 **
10947509-C-A **
18212542-C-A 16100662-C-A **
21315137-C-G 19153251-C-G **
26415676-CAAAA-C 24269529-CAAAA-C P1_Y1 20×A**
18020791-C-A 15908911-C-A **
10686884-G-A **
11022023-C-T **
16682696-G-A 14570816-G-A **
56868963-C-A **
56842298-C-A **
15677265-G-T 13565385-G-T **
22171388-T-C 20009502-T-C **
10790062-G-A **
21368387-C-A 19206501-C-A **
18344347-T-C 16232467-T-C P6_Prx **
4449181-C-A 4581140-C-A **
13885458-C-A 11764752-C-A **
24016987-T-TC 21870840-T-TC **
22249907-C-T 20088021-C-T DYZ19 **
23441356-C-A 21279470-C-A **
10653258-A-G **
23825773-A-AAAAT 21663887-A-AAAAT 11×AT**
23786342-C-A 21624456-C-A **
10973657-C-A **
7135419-C-T 7267378-C-T **
19604808-GCA-G 17492928-GCA-G P5_Prx **
10770667-C-G **
10770687-C-CCCCTT **
18738154-A-C 16626274-A-C **
10935637-A-G **
23545055-C-A 21383169-C-A **
15612215-C-T 13500335-C-T **
10803967-A-C **
10803971-C-A **
16411252-C-A 14299372-C-A **
13963316-C-A 11842610-C-A **
14471801-T-A 12351070-T-A **
10652251-T-C **
3176022-CAAA-C 3307981-CAAA-C 14×A**
24363809-C-A 22217662-C-A **
23438946-G-C 21277060-G-C **
10760452-T-C **
11655741-C-A **
14413041-C-T 12292338-C-T **
11026090-T-C **
2925909-C-A 3057868-C-A **
19895333-T-TA 17783453-T-TA P5_Prx **
23886558-T-TC 21724672-T-TC **
24509328-A-G 22363181-A-G **
10987242-CTTT-C **
10760455-C-T **
3400658-GT-G 3532617-GT-G 9×T**
10760458-T-C **
10803970-C-A **
24432721-C-A 22286574-C-A **
17589062-C-A 15477182-C-A **
10868790-T-C **
16463978-C-A 14352098-C-A **
2665863-A-C 2797822-A-C **
10973631-C-T **
10652278-A-ATCACT **
19653688-T-G 17541808-T-G P5_Prx **
10652282-TGTC-T **
3929009-C-A 4060968-C-A **
5434020-G-GT 5565979-G-GT 13×T**
19394118-G-C 17282238-G-C **
11022024-T-G **
10677802-GCATTC-G **
16682706-G-A 14570826-G-A **
5191319-A-T 5323278-A-T **
8052634-C-A 8184593-C-A **
56752174-A-G **
7864342-C-A 7996301-C-A **
10652288-C-T **
14293587-T-A 12172881-T-A **
10969470-C-T **
16562785-A-C 14450905-A-C **
21979834-A-T 19817948-A-T **
8325532-T-C 8457491-T-C **
23188233-G-T 21026347-G-T **
23142382-C-A 20980496-C-A **
10807364-C-A **
13460980-T-G 11305304-T-G **
13460972-G-A 11305296-G-A **
10987276-A-T **
14219632-G-T 12098926-G-T **
10652295-A-G **
10652303-T-C **
10652311-T-C **
10652322-G-A **
10652328-T-A **
10652335-T-C **
10652337-C-G **
14184407-C-A 12063701-C-A **
3851642-C-CT 3983601-C-CT 10×T**
10987244-T-TACA **
18173111-C-A 16061231-C-A **
8008137-G-A 8140096-G-A **
16462739-C-A 14350859-C-A **
19508177-CTTTT-C 17396297-CTTTT-C 19×T**
13217964-C-A 11062288-C-A **
10827143-T-A **
13705503-A-T 11549827-A-T **
56826413-GATTGTATTCC-G,GATTGCATTCCATTTG ***
23389658-C-A 21227772-C-A ***
28755685-G-T 26609538-G-T ***
22447011-A-G 20285125-A-G DYZ19 ***
13448304-C-T 11292628-C-T ***
19385048-C-A 17273168-C-A ***
13471944-G-T 11316268-G-T ***
56831407-T-C ***
56831439-C-T ***
10987778-C-G ***
10992319-C-G ***
13474003-C-T 11318327-C-T ***
22188682-AACACACAC-A 20026796-AACACACAC-A 23×AC***
10992306-A-C ***
16598983-AC-A,AA 14487103-AC-A,AA ***
11652859-A-G BY27137 ***
10746993-C-G ***
13441590-T-TTAA 11285914-T-TTAA ***
56836201-A-T ***
16427459-C-T 14315579-C-T BY107706 ***
6402329-C-A 6534288-C-A ***
7158033-CA-C 7289992-CA-C 10×A***
10653234-C-A ***
13488926-G-A 11333250-G-A ***
19034176-C-A 16922296-C-A ***
3790878-GTATA-G,GTA 3922837-GTATA-G,GTA 21×TA***
13213820-CGGATGGAT-C,CGGAT 11058144-CGGATGGAT-C,CGGAT 10×GGAT***
21306589-C-A 19144703-C-A ***
17793303-AT-A 15681423-AT-A 8×T***
18039366-ATTT-A 15927486-ATTT-A 30×T***
13476828-T-A 11321152-T-A ***
13486004-A-G 11330328-A-G ***
13474011-A-G 11318335-A-G ***
13448294-G-T 11292618-G-T ***
21547859-CTGTG-C 19385973-CTGTG-C 17×TG***
13856841-A-G 11736135-A-G ***
58985644-T-A 56839497-T-A ***
19045687-C-CT 16933807-C-CT 17×T***
6402306-A-T 6534265-A-T ***
6878971-C-CA 7010930-C-CA 11×A***
10764549-TC-T,TG ***
6114161-T-G 6246120-T-G ***
14900644-AT-A 12788711-AT-A 27×T***
13488680-C-T 11333004-C-T ***
13463904-T-C 11308228-T-C BY26170 ***
58976478-T-G 56830331-T-G ***
13818045-A-G 11697339-A-G ***
19187385-ATT-A,AT 17075505-ATT-A,AT 28×T***
15733879-CAA-C 13621999-CAA-C 25×A***
10663392-CTTCTT-C ***
5698840-G-T 5830799-G-T ***
10938520-C-T ***
19304776-C-A 17192896-C-A ***
16278726-C-A 14166846-C-A ***
13196433-TC-T 11040757-TC-T ***
13478239-G-A,T 11322563-G-A,T ***
13482391-A-G 11326715-A-G ***
13485336-A-C 11329660-A-C ***
13485349-C-CA 11329673-C-CA ***
11666127-C-A ***
14484812-G-T 12364081-G-T ***
14819674-CTTT-C,CTT 12707741-CTTT-C,CTT 15×T***
16702001-G-T 14590121-G-T ***
10958364-CATTCCATTCC-C,CATTCCATTCA ***
16720002-C-A 14608122-C-A ***
17101705-C-A 14989825-C-A ***
17387290-GTGTGTA-G,GTA 15275410-GTGTGTA-G,GTA ***
17397253-ATTTT-A 15285373-ATTTT-A 16×T***
17631594-C-A 15519714-C-A ***
18159916-G-A 16048036-G-A ***
18454879-CCCTTTCTTTCTT-C,CTCTTTCTTTCTT 16342999-CCCTTTCTTTCTT-C,CTCTTTCTTTCTT P6_Dst ***
18524327-C-A 16412447-C-A P6_Dst ***
19042956-C-A 16931076-C-A ***
11017793-C-A ***
10693981-CATTCCATTCA-C,CATTCC ***
10938546-T-C ***
9934242-G-A 10096633-G-A ***
10938565-ACTCCTT-A ***
10938575-ATTTC-A ***
22775246-C-A 20613360-C-A ***
8462064-CAAAAAAAA-C 8594023-CAAAAAAAA-C 26×A***
17374808-G-T 15262928-G-T ***
14607769-G-T 12495971-G-T ***
10828197-C-CGGAAG ***
13476862-C-G 11321186-C-G ***
13476865-GA-G 11321189-GA-G ***
56832749-C-T ***
10667035-A-G ***
10828979-G-A ***
13856652-C-A 11735946-C-A ***
2843833-C-A 2975792-C-A ***
5457278-G-T 5589237-G-T ***
6780749-T-A 6912708-T-A ***
7619014-G-A 7750973-G-A S10411 ***
7958372-C-A 8090331-C-A ***
8142705-C-A 8274664-C-A ***
8665752-G-T 8797711-G-T ***
56887133-GTTGTTGT-G,GTTGTTGTTGT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 331278967621278373377718945
Used in age calculations967621278373377718945
Counts of SNPs00
Variant counts last updated 2018-09-14 20:54:50.



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