Tree Position

A0-T-YP2191 > P305 > L413/PF1409/V31 > M168/PF1416 > P143 > M89/PF2746 > F1329/M3658 > F929 > IJK > IJ > M170 > Z2881 > DF29 > Z58 > Z59 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
299991
19813301-C-A 17701421-C-A P5_Prx A*
6165662-C-CA 6297621-C-CA IR3_Dst 13×AA*
19839933-A-AT 17728053-A-AT P5_Prx 10×TA*
19581633-C-A 17469753-C-A P5_Prx YA*
20612574-G-A 18450688-G-A P4_Prx A*
20729014-T-C 18567128-T-C P4_Prx A*
6329754-G-T 6461713-G-T IR3_Dst A*
6294288-G-A 6426247-G-A IR3_Dst A*
6239022-A-G 6370981-A-G IR3_Dst A*
13694977-T-C 11539301-T-C A*
18298242-G-A 16186362-G-A P6_Prx A*
24262614-T-C 22116467-T-C P3_b1 A*
25864550-G-A 23718403-G-A P1_Y1 A*
25889344-T-G 23743197-T-G P1_Y1 A*
25976843-C-T 23830696-C-T P1_Y1 A*
18340941-G-A 16229061-G-A P6_Prx A*
2658864-G-A 2790823-G-A Y32130 FGC64879 YY+
8506250-C-G 8638209-C-G Y39590 YY+
16020280-T-C 13908400-T-C L573 YY+
9989467-C-G 10151858-C-G BY46739 Y+
23166107-C-G 21004221-C-G Y44193 Y+
23113744-G-T 20951858-G-T S25150 YY+
16449452-G-A 14337572-G-A Y41489 YY+
9038718-TAAAG-T 9201109-TAAAG-T +
22760110-C-T 20598224-C-T FGC64900 Y31036 YY+
16669211-C-T 14557331-C-T S18629 YY+
22514087-C-T 20352201-C-T Y43794 Y+
16760815-T-C 14648935-T-C FGC64893 Y31035 YY+
16890002-G-T 14778122-G-T S18934 YY+
8793192-T-C 8925151-T-C BY75932 YY+
17197466-C-A 15085586-C-A S19340 YY+
6704048-C-T 6836007-C-T Y38606 YY+
15329385-A-G 13217503-A-G Y40933 YY+
8492976-A-C 8624935-A-C Y32136 FGC64887 YY+
17347459-C-CA 15235579-C-CA +
8458715-A-T 8590674-A-T FGC64886 Y32132 YY+
13705187-G-C 11549511-G-C BY29895 +
8033591-T-A 8165550-T-A FGC64885 Y32135 YY+
7124374-G-A 7256333-G-A Y38832 Y+
8032741-G-A 8164700-G-A Y32134 FGC64884 YY+
7203307-G-A 7335266-G-A Y38867 YY+
7705195-G-T 7837154-G-T S10546 Y+
19281413-G-A 17169533-G-A S22055 YY+
7533051-T-A 7665010-T-A FGC64881 Y32133 YY+
7458453-T-G 7590412-T-G BY65328 IR1_L +
18909491-G-A 16797611-G-A Y42741 YY+
18843729-C-A 16731849-C-A CTS9352 Z2902 S2134 YY+
21404947-G-A 19243061-G-A S23035 YY+
9989852-A-C 10152243-A-C FGC64888 Y+
14923342-AG-A 12811407-AG-A +
14790922-A-G 12678993-A-G Y40663 YY+
3720492-G-A 3852451-G-A Y38529 +
24428572-A-C 22282425-A-C Y31037 FGC64901 Y+
22081175-G-A 19919289-G-A FGC64878 Y32131 YY+
13990338-C-T 11869632-C-T FGC64890 Y31034 YY+
15112893-A-G 13000980-A-G FGC64892 Y32129 YY+
17275758-AAAGGG-A 15163878-AAAGGG-A 10×AAGGG*
9519812-T-TTTTC 9682203-T-TTTTC 17×TTTC*
17319880-G-GAAGAAAGAAAGA 15208000-G-GAAGAAAGAAAGA 16×AAGA*
19336658-TAA-T 17224778-TAA-T 14×A*
19436760-GAGAGAGAA-G,GAGAAAGAA 17324880-GAGAGAGAA-G,GAGAAAGAA *
21623520-AACAC-A 19461634-AACAC-A 19×AC*
9503771-A-ATATCTATCTATC 9666162-A-ATATCTATCTATC 12×TATC*
8100215-C-CT 8232174-C-CT 11×T*
6347812-AAG-A,AAGAA 6479771-AAG-A,AAGAA *
8125062-G-GAGAGAAGAGA 8257021-G-GAGAGAAGAGA 12×AGAGA*
18070661-A-ATG 15958781-A-ATG 12×TG*
10958667-A-T **
10949849-A-C **
10652750-C-T **
10935524-TTCCAC-T **
8067304-C-A 8199263-C-A **
10924652-T-C **
7995991-A-C 8127950-A-C **
11008711-T-C **
10971981-C-G **
13223673-A-G 11067997-A-G **
7935763-A-G 8067722-A-G **
10889806-A-T **
7645280-A-G 7777239-A-G **
13223676-G-GGC 11068000-G-GGC **
11015758-T-C **
7645210-T-A 7777169-T-A Y32128 **
11019448-C-CCACTT **
11032761-C-A **
7436191-A-T 7568150-A-T **
13196352-C-A 11040676-C-A **
7432352-C-A 7564311-C-A **
7427915-C-A 7559874-C-A **
7422419-T-C 7554378-T-C **
10911490-C-A **
13216611-C-G 11060935-C-G **
10886201-C-T **
9929019-T-C 10091410-T-C **
10652744-A-T **
10652732-G-C **
10646726-C-A **
10045063-G-T 10207454-G-T **
10026787-C-A 10189178-C-A **
10022091-A-C 10184482-A-C **
10011860-C-A 10174251-C-A **
13201848-A-G 11046172-A-G **
9946291-C-A 10108682-C-A **
9934981-T-A 10097372-T-A **
10653139-A-G **
9437310-CTT-C 9599701-CTT-C **
10860081-C-A **
10663620-TC-T **
8983070-T-C 9145461-T-C **
8852060-G-T 8984019-G-T **
13199164-CAAA-C 11043488-CAAA-C 18×A**
13198138-T-C 11042462-T-C **
10785410-C-A **
8713073-C-G 8845032-C-G **
8692093-T-C 8824052-T-C **
8661753-A-G 8793712-A-G **
10791181-TA-T **
13223656-GGA-G 11067980-GGA-G **
9731617-T-TG 9894008-T-TG IR3_Prx **
28812340-G-A 26666193-G-A **
7384698-C-A 7516657-C-A **
3880987-G-T 4012946-G-T **
3533791-A-G 3665750-A-G **
3651408-A-G 3783367-A-G **
3688980-C-T 3820939-C-T Y31033 **
3728585-G-T 3860544-G-T **
3771823-G-T 3903782-G-T **
3787420-G-T 3919379-G-T **
3787585-T-G 3919544-T-G **
3965892-C-A 4097851-C-A **
3272894-C-A 3404853-C-A **
3987919-A-G 4119878-A-G **
3995395-C-A 4127354-C-A **
4080983-C-A 4212942-C-A **
4103913-C-A 4235872-C-A **
4124222-T-G 4256181-T-G **
4177874-A-G 4309833-A-G **
4206067-A-T 4338026-A-T **
3511495-G-T 3643454-G-T **
3226405-G-T 3358364-G-T **
4356942-C-A 4488901-C-A **
25524727-G-A 23378580-G-A P1_gr1 **
10791149-T-C **
10791152-A-T **
58980772-T-C 56834625-T-C **
14610673-ACCT-A 12498875-ACCT-A **
13254615-C-T 11098939-C-T **
10011251-G-T 10173642-G-T **
11659438-C-A **
2702014-G-C 2833973-G-C **
3198547-T-C 3330506-T-C **
2791774-G-T 2923733-G-T **
2833287-C-A 2965246-C-A **
2856612-C-A 2988571-C-A **
2900670-A-G 3032629-A-G **
2900724-A-G 3032683-A-G **
2906725-A-T 3038684-A-T **
2947763-C-A 3079722-C-A **
3033045-G-A 3165004-G-A **
4222453-A-G 4354412-A-G **
4448816-G-T 4580775-G-T **
7378535-C-A 7510494-C-A **
7214406-C-A 7346365-C-A **
6829775-G-T 6961734-G-T **
6831982-C-A 6963941-C-A **
6832135-C-A 6964094-C-A **
6881307-T-C 7013266-T-C **
7091156-C-A 7223115-C-A **
13228862-A-C 11073186-A-C **
7188467-C-A 7320426-C-A **
7280960-T-TC 7412919-T-TC **
6205564-T-C 6337523-T-C IR3_Dst **
7280962-T-TC 7412921-T-TC **
7285209-C-A 7417168-C-A **
7303627-C-G 7435586-C-G **
7303631-T-C 7435590-T-C **
7303635-C-T 7435594-C-T **
7319180-A-G 7451139-A-G **
7322660-A-G 7454619-A-G **
6614523-T-C 6746482-T-C **
6007692-G-T 6139651-G-T **
4466635-C-A 4598594-C-A **
4908934-C-A 5040893-C-A **
4585278-A-G 4717237-A-G **
4586051-C-A 4718010-C-A **
4626977-C-A 4758936-C-A **
4769159-T-G 4901118-T-G **
4778178-CAAAA-C 4910137-CAAAA-C 15×A**
4851437-A-G 4983396-A-G **
4880292-A-C 5012251-A-C **
4958607-G-T 5090566-G-T **
5990303-A-G 6122262-A-G **
5059670-CA-C 5191629-CA-C **
5107298-G-A 5239257-G-A **
5201535-G-T 5333494-G-T **
5224656-G-T 5356615-G-T **
5341001-G-A 5472960-G-A **
5414434-C-T 5546393-C-T **
5458526-C-A 5590485-C-A **
5620731-T-C 5752690-T-C **
13223680-G-C 11068004-G-C **
12372537-A-T **
13236714-T-A 11081038-T-A **
23019917-T-G 20858031-T-G **
22564757-G-A 20402871-G-A **
22692160-A-G 20530274-A-G **
22694700-C-A 20532814-C-A **
22787113-T-C 20625227-T-C **
22949875-A-T 20787989-A-T **
23013768-C-G 20851882-C-G **
23066825-C-A 20904939-C-A **
22465993-T-C 20304107-T-C DYZ19 **
23184268-A-T 21022382-A-T **
23252713-C-A 21090827-C-A **
23321858-G-C 21159972-G-C **
23475571-C-A 21313685-C-A **
23789551-C-A 21627665-C-A **
23807417-A-C 21645531-A-C **
23807429-A-T 21645543-A-T **
22468780-G-C 20306894-G-C DYZ19 **
22316183-T-C 20154297-T-C DYZ19 **
23848068-T-C 21686182-T-C **
21315317-T-C 19153431-T-C **
20376771-T-C 18214885-T-C P5_Dst **
20729162-G-A 18567276-G-A P4_Prx **
21152046-A-G 18990160-A-G **
21152049-T-C 18990163-T-C **
21152065-A-T 18990179-A-T **
21240721-C-A 19078835-C-A **
21283369-T-C 19121483-T-C **
21427063-C-A 19265177-C-A **
21972252-C-A 19810366-C-A **
21457187-G-T 19295301-G-T **
21511470-T-C 19349584-T-C **
21511503-G-A 19349617-G-A **
21512276-A-G 19350390-A-G **
21642880-G-C 19480994-G-C Y32127 FGC64897 **
21846526-C-A 19684640-C-A **
21920243-C-A 19758357-C-A **
23825128-G-T 21663242-G-T **
21755415-G-T **
19741026-G-T 17629146-G-T P5_Prx **
28779003-G-T 26632856-G-T **
28661650-C-A 26515503-C-A **
28722007-A-T 26575860-A-T **
28722703-C-A 26576556-C-A **
28726781-A-C 26580634-A-C **
28772863-C-A 26626716-C-A **
28778902-C-T 26632755-C-T **
28779006-T-C 26632859-T-C **
28618306-C-A 26472159-C-A **
28779013-T-C 26632866-T-C **
28779049-A-TTG 26632902-A-TTG **
56763569-A-G **
56831045-T-TCCCTCCCATC **
56835425-C-A **
56837863-C-T **
56855530-C-A **
28657523-C-G 26511376-C-G **
28591085-C-G 26444938-C-G **
21755696-T-C **
24651477-T-C 22505330-T-C P3_b2 **
23952660-T-A 21806513-T-A **
23953936-C-A 21807789-C-A **
23997013-C-T 21850866-C-T **
24264740-CA-C 22118593-CA-C P3_b1 **
24341926-T-C 22195779-T-C P3_t1 **
24445404-A-G 22299257-A-G **
24518440-G-T 22372293-G-T **
26081932-A-AAT 23935785-A-AAT P1_Y1 **
28555582-A-G 26409435-A-G **
26409877-A-G 24263730-A-G P1_Y1 **
28462200-G-T 26316053-G-T **
28476684-G-T 26330537-G-T **
28482878-TAAA-T 26336731-TAAA-T 10×A**
28500267-C-T 26354120-C-T **
28514395-C-A 26368248-C-A **
28532886-C-A 26386739-C-A **
20376740-C-A 18214854-C-A P5_Dst **
19706679-C-G 17594799-C-G P5_Prx **
13254615-C-CT 11098939-C-CT **
15179221-A-G 13067307-A-G **
14495634-G-T 12383831-G-T **
14531961-C-A 12420162-C-A **
14711922-C-A 12599989-C-A **
14712649-G-T 12600716-G-T **
14715587-G-T 12603654-G-T **
15081508-C-T 12969598-C-T **
15468381-A-T 13356501-A-T **
14464372-G-T 12343645-G-T **
15468389-G-T 13356509-G-T **
15570890-C-A 13459010-C-A **
15741132-A-T 13629252-A-T **
15743144-A-C 13631264-A-C **
15795781-C-A 13683901-C-A **
15798253-C-A 13686373-C-A **
15842971-C-T 13731091-C-T **
18040466-C-T 15928586-C-T **
14398394-T-A 12277690-T-A **
16157744-G-GAAAAC 14045864-G-GAAAAC P8_Dst **
13799423-T-A 11678717-T-A FGC64889 **
13295828-A-G 11140152-A-G **
13315575-A-G 11159899-A-G **
13489405-C-G 11333729-C-G **
11652637-A-G **
11659763-A-T **
11674777-A-C **
11674779-A-T **
13856679-A-G 11735973-A-G **
14367765-G-C 12247061-G-C **
13858094-C-A 11737388-C-A 5×GGAAT**
13964671-CT-C 11843965-CT-C **
14073167-G-T 11952461-G-T **
14180592-A-G 12059886-A-G **
14272962-T-A 12152256-T-A **
14285886-C-A 12165180-C-A **
14303035-A-G 12182329-A-G **
16059865-C-A 13947985-C-A **
16164493-A-G 14052613-A-G P8_Dst **
19506868-A-C 17394988-A-C **
18402418-C-A 16290538-C-A P6_Gap **
17735273-C-G 15623393-C-G **
17735322-A-G 15623442-A-G **
17779520-A-G 15667640-A-G **
17859195-C-A 15747315-C-A **
17870956-C-A 15759076-C-A **
18154370-C-T 16042490-C-T **
18174686-GTA-G 16062806-GTA-G **
18456576-G-T 16344696-G-T P6_Dst **
17588578-T-G 15476698-T-G **
18565237-AT-A 16453357-AT-A **
18848875-G-T 16736995-G-T **
18937573-C-G 16825693-C-G **
19041447-G-A 16929567-G-A **
19244730-A-C 17132850-A-C **
19290454-A-T 17178574-A-T **
19416548-GA-G 17304668-GA-G **
17684482-C-A 15572602-C-A **
17569132-G-C 15457252-G-C **
16208803-G-T 14096923-G-T **
17048051-T-C 14936171-T-C **
16277890-C-A 14166010-C-A **
16520933-C-T 14409053-C-T **
16612592-C-A 14500712-C-A **
16645760-A-G 14533880-A-G **
16677119-A-G 14565239-A-G **
16938453-C-T 14826573-C-T **
17012911-A-G 14901031-A-G Y41797 **
17126578-CA-C 15014698-CA-C **
17568502-C-A 15456622-C-A **
17317735-C-CAA 15205855-C-CAA **
17318047-A-G 15206167-A-G **
17428310-A-G 15316430-A-G **
17431357-C-A 15319477-C-A **
17465072-C-A 15353192-C-A **
17479200-G-T 15367320-G-T **
17481234-G-A 15369354-G-A **
13643435-C-A 11487759-C-A **
5755872-G-T 5887831-G-T **
16635973-C-A 14524093-C-A **
8279826-C-A 8411785-C-A **
11028252-C-T **
10655096-T-C **
7217372-C-A 7349331-C-A **
18361466-T-A 16249586-T-A P6_Prx **
16562808-T-A 14450928-T-A **
4976787-C-CA 5108746-C-CA 21×A**
11034902-G-C **
11028229-T-A **
16445710-C-A 14333830-C-A **
17183395-C-A 15071515-C-A **
8069959-A-T 8201918-A-T 19×T**
16034337-T-TA 13922457-T-TA 12×A**
4416867-C-CA 4548826-C-CA 17×A**
10821906-C-T **
10821907-C-A **
11028247-T-A **
11028220-A-C **
3804795-A-T 3936754-A-T **
10950512-C-A **
10950471-C-T **
10950474-C-T **
10950491-A-C **
10950494-C-T **
10950499-T-A **
10950504-T-C **
10950509-T-C **
10744980-C-A **
11028218-T-A **
10744992-C-T **
10745015-A-C **
10745021-A-T **
10745024-A-T **
10745068-A-C **
10745073-C-A **
10745078-A-G **
13854482-C-A 11733776-C-A **
10885141-C-G **
10950467-T-C **
10821912-C-A **
28618346-C-A 26472199-C-A **
23317687-G-GT 21155801-G-GT **
4563248-G-T 4695207-G-T **
10935520-T-A **
5858468-C-A 5990427-C-A **
16077535-C-T 13965655-C-T **
22561390-T-TA 20399504-T-TA 10×A**
5231890-C-CT 5363849-C-CT 22×T**
26161193-T-TC 24015046-T-TC P1_Y1 **
5845069-C-A 5977028-C-A **
24518467-G-T 22372320-G-T **
4872568-C-A 5004527-C-A **
17580932-CTT-C 15469052-CTT-C 13×T**
9498954-C-A 9661345-C-A **
14142068-C-A 12021362-C-A **
10935508-A-T **
14106946-C-A 11986240-C-A **
10935597-C-T **
11034830-A-C **
25333897-T-A 23187750-T-A P2_r1 **
11034833-G-T **
11034847-T-A **
11034920-T-A **
10807060-C-T **
10670918-C-T **
10670928-A-T **
23391496-ATTT-A 21229610-ATTT-A 20×T**
10942667-T-TACTCC **
22215217-CTTTT-C 20053331-CTTTT-C 17×T**
18858611-GAA-G 16746731-GAA-G 14×A**
21482785-A-T 19320899-A-T **
22165195-T-C 20003309-T-C **
9057479-A-G **
9057494-T-C **
9057499-A-G **
10942676-C-CGACTCTATTG **
10950469-A-C **
10950463-A-T **
10791180-G-T **
18825629-C-A 16713749-C-A 20×A**
28779057-C-T 26632910-C-T **
26228738-C-T 24082591-C-T P1_Y1 **
14795080-CTT-C 12683151-CTT-C 24×T**
20603890-A-G 18442004-A-G P5_Dst **
9424598-GAAAAA-G 9586989-GAAAAA-G 16×A**
15061690-C-CT 12949782-C-CT 13×T**
7723948-CTT-C 7855907-CTT-C 25×T**
13394839-CGGG-C 11239163-CGGG-C 13×G**
58980776-A-T 56834629-A-T **
28700762-T-C 26554615-T-C FGC2531 **
14667817-CAA-C 12555882-CAAA-C 23×A**
17284532-C-CTT 15172652-C-CTT 21×T**
14196008-G-A 12075302-G-A **
7138250-C-A 7270209-C-A **
7534430-A-G 7666389-A-G **
22472947-G-C 20311061-G-C DYZ19 **
16245924-G-T 14134044-G-T **
13857210-C-A 11736504-C-A **
10691108-C-G **
19130777-G-A 17018897-G-A **
58980777-T-C 56834630-T-C **
58827357-C-T 56763514-G-A **
13488900-G-A 11333224-G-A **
58999396-G-T 56853249-G-T **
4389597-CT-C 4521556-CT-C 15×T**
26730181-T-G 24584034-T-G P1_g2 **
3522968-TA-T 3654927-TA-T 24×A**
24595389-T-A 22449242-T-A P3_t2 **
59016351-C-T 56870204-C-T **
26391527-T-TACAC 24245380-T-TACAC P1_Y1 21×AC**
6948125-G-T 7080084-G-T **
7197367-C-A 7329326-C-A **
58827354-C-G 56763517-G-C **
22254585-C-T 20092699-C-T DYZ19 **
24509310-C-A 22363163-C-A **
59006120-G-A 56859973-G-A **
19510062-C-CT 17398182-C-CT 12×T**
10653210-C-G **
10950459-C-T **
10745027-A-C **
10761119-A-T **
17136931-CTT-C 15025051-CTT-C 18×T**
10971972-C-T **
11028142-G-C **
10760345-CACTGT-C **
11034826-G-T **
10745005-C-T **
10745032-A-C **
7229111-C-A 7361070-C-A **
10754937-C-T **
10924993-C-T **
10925009-A-T **
10925015-T-C **
10925017-C-A **
10925030-C-A **
10942704-C-T **
10761116-T-G **
10887974-C-T **
10673865-T-C **
17090839-ATTT-A 14978959-ATTT-A 29×T**
10935584-T-G **
10950407-C-T **
10950419-G-C **
10950421-C-G **
10950444-C-A **
10950450-T-G **
5858423-C-A 5990382-C-A **
10691100-C-T **
10887969-C-T **
10942661-T-A **
10942662-C-A **
10887943-A-T **
10887946-C-G **
10887953-A-G **
10887954-C-T **
10887968-A-C **
11014576-C-G **
3545838-C-A 3677797-C-A **
13958400-TAA-T 11837694-TAA-T 14×A**
21946945-A-ATT 19785059-A-ATT 15×T**
56763560-T-A **
11014572-A-C **
11014581-A-T **
11014603-T-C **
11014606-C-T **
11014607-ATTTC-A **
21945422-C-A 19783536-C-A **
11014543-T-AATCCA **
18738140-A-G 16626260-A-G **
22797647-G-T 20635761-G-T **
16270535-C-A 14158655-C-A **
22316427-G-GC 20154541-G-GC DYZ19 **
15507830-A-C 13395950-A-C **
28570365-G-GA 26424218-G-GA 8×A**
11014550-C-T **
7935757-G-A 8067716-G-A **
13898871-G-A 11778165-G-A **
22080418-C-A 19918532-C-A **
20459035-T-C 18297149-T-C P5_Dst **
9436874-C-A 9599265-C-A **
16421088-C-A 14309208-C-A **
10653246-C-T **
10658712-C-A **
18937570-G-C 16825690-G-C **
4447291-GAA-G 4579250-GAA-G 11×A**
28558893-C-A 26412746-C-A **
19415614-C-A 17303734-C-A **
17115090-C-A 15003210-C-A **
24638022-A-AC 22491875-A-AC P3_t2 **
16336897-G-GTT 14225017-G-GTT 23×T**
21409460-CAAA-C 19247574-CAAA-C 30×A**
4417496-C-A 4549455-C-A **
8723671-C-A 8855630-C-A **
19544484-C-A 17432604-C-A **
14272955-C-A 12152249-C-A **
10868371-C-G **
5011111-C-A 5143070-C-A **
26730194-GAAAAAGA-G 24584047-GAAAAAGA-G P1_g2 **
3990632-C-A 4122591-C-A **
28778894-G-T 26632747-G-T **
7935760-G-A 8067719-G-A **
7042727-C-A 7174686-C-A **
16117483-T-TA 14005603-T-TA P8_Prx **
56851296-C-A **
14328182-C-A 12207476-C-A **
15866268-CAAAAAAAAAAAAAAAAA-C 13754388-CAAAAAAAAAAAAAAAAA-C 43×A**
10847579-T-C **
9942928-C-A 10105319-C-A **
7285238-G-T 7417197-G-T **
7385863-C-A 7517822-C-A **
28812327-A-G 26666180-A-G **
10844240-T-G **
10940396-C-T **
10868359-CAGTCA-C **
14570756-ATTTTTTTT-A 12458956-ATTTTTTTT-A 22×T**
13611965-C-A 11456289-C-A **
10653217-A-T **
10653211-T-C **
16625828-C-A 14513948-C-A **
10685547-C-A **
15918493-C-A 13806613-C-A **
6120309-G-A 6252268-G-A **
13611970-G-A 11456294-G-A **
28779053-C-G 26632906-C-G **
13611971-C-T 11456295-C-T **
13480499-C-A 11324823-C-A **
28659985-C-A 26513838-C-A **
9735605-GTTTTTTT-G 9897996-GTTTTTTT-G IR3_Prx 30×T**
15832216-CTTTTT-C 13720336-CTTTTT-C 22×T**
28779044-C-T 26632897-C-T **
28779046-A-T 26632899-A-T **
28618398-C-A 26472251-C-A **
20641645-G-GA 18479759-G-GA P4_Prx **
13205595-A-T 11049919-A-T FGC67192 9×AT**
10942728-A-C **
20045279-AAAGAAAG-A 17933399-AAAGAAAG-A P5_Prx **
15498024-A-C 13386144-A-C **
10899997-A-G **
9057513-T-G **
9057512-G-A **
10751169-C-T **
23789324-GTTT-G 21627438-GTTT-G 13×T**
19509976-C-A 17398096-C-A **
21617605-CAAA-C 19455719-CAAA-C 23×A**
10663696-C-A **
13433191-C-A 11277515-C-A **
10791163-G-T **
7615266-C-A 7747225-C-A **
13463735-C-A 11308059-C-A **
14295658-C-A 12174952-C-A **
23111782-C-A 20949896-C-A **
6773146-C-A 6905105-C-A **
13308825-G-C 11153149-G-C **
8673826-C-A 8805785-C-A **
10666978-C-T **
10888019-T-G **
11034815-A-C **
11014539-T-C **
10935602-C-T **
10935591-C-CTCCATAG **
10935588-A-ACTC **
10935556-C-CCTTTT **
4002301-C-A 4134260-C-A **
10946688-C-A **
16562820-C-A 14450940-C-A **
18848344-G-T 16736464-G-T **
20771926-A-AG 18610040-A-AG P4_Prx **
6510011-C-A 6641970-C-A **
2810434-TA-T 2942393-TA-T **
7018027-ATTTT-A 7149986-ATTTT-A 24×T**
19183843-G-GTT 17071963-G-GTT **
10942701-C-A **
23425343-CAAA-C 21263457-CAAA-C 14×A**
19200986-C-A 17089106-C-A **
18196394-G-T 16084514-G-T **
10900000-C-G **
10653216-A-C **
3061230-C-A 3193189-C-A **
8669745-C-A 8801704-C-A **
10942691-C-CCACTG **
4003130-C-A 4135089-C-A **
10688928-G-T **
10653227-A-C **
13217240-C-CTT 11061564-C-CTT 16×T**
14246935-C-A 12126229-C-A **
10653230-T-A **
11014559-T-C **
10653224-G-T **
14366358-C-A 12245653-C-A **
58905338-C-A 56685533-G-T ***
23984811-A-AT 21838664-A-AT 11×T***
9852914-A-AAAGGAAGG 10015305-A-AAAGGAAGG 17×AAGG***
10898265-C-A ***
10841904-C-A ***
13470494-G-A 11314818-G-A ***
10878345-G-A,C ***
2970426-C-A 3102385-C-A ***
17950825-AATATATATATATAT-A 15838945-AATATATATATATAT-A 27×AT***
3550574-CAA-C,CA 3682533-CAA-C,CA 24×A***
19520845-TAA-T 17408965-TAA-T 21×A***
15776056-G-T 13664176-G-T ***
13447147-CATTCC-C,CATTCT 11291471-CATTCC-C,CATTCT ***
18592167-C-CA 16480287-C-CA 18×A***
14733879-TA-T 12621947-TA-T 11×A***
21405832-CAA-C,CA 19243946-CAA-C,CA 15×A***
28793432-AC-A 26647285-AC-A ***
58848168-T-C 56742703-A-G ***
13457791-C-A 11302115-C-A ***
14266305-GTA-G 12145599-GTA-G 14×TA***
23773367-CACAC-C,CACAT 21611481-CACAC-C,CACAT ***
27791907-T-TTCC 25645760-T-TTCC P1_Y2 ***
15507783-G-GT 13395903-G-GT 25×T***
58975316-C-CATTAA 56829169-C-CATTAA ***
13489735-G-A 11334059-G-A ***
18653684-CAA-C,CA 16541804-CAA-C,CA 20×A***
13468244-G-A 11312568-G-A ***
10632434-G-GCATTCCATTCCATTCCATTC ***
11022934-C-A ***
16002920-T-C 13891040-T-C ***
11022950-T-G ***
11022951-C-A ***
21237230-C-CA 19075344-C-CA 16×A***
8672945-C-A 8804904-C-A ***
9079460-A-G 9241851-A-G ***
14931794-T-G 12819859-T-G ***
10796652-C-CGGAGG ***
21766533-AATATATAT-A 19604647-AATATATAT-A 19×AT***
11022924-C-A ***
14090964-C-A 11970258-C-A ***
10755466-C-A ***
14530879-C-T 12419080-C-T ***
56836844-T-TACTCC ***
10657412-T-C ***
10789399-G-C,T ***
10845652-A-G ***
10682546-C-A ***
10686270-T-C ***
13208776-A-G ***
13579674-G-T 11423998-G-T ***
10889266-GCCATTCCATTCCATTCCATT-G,GCCATTCCATT ***
10755449-TTACTG-T ***
10965548-C-T ***
11022926-C-G ***
8399178-C-A 8531137-C-A ***
10892597-C-A ***
6347729-AGAAAGAAAGAAA-A,AGAAGGAAG 6479688-AGAAAGAAAGAAA-A,AGAAGGAAG ***
56836680-G-C ***
13489311-G-C 11333635-G-C ***
10926617-C-A ***
13448928-C-CCACTG 11293252-C-CCACTG ***
21388665-CTCTT-C,CTT 19226779-CTCTT-C,CTT ***
21084312-C-CATATAT 18922426-C-CATATAT 11×AT***
17459485-CAAAAAA-C 15347605-CAAAAAA-C 25×A***
13489817-T-C 11334141-T-C ***
13858945-C-A 11738239-C-A ***
18806044-CTTTTTT-C,CTTTTT 16694164-CTTTTTT-C,CTTTTT 19×T***
19143125-ATTTTT-A,ATT 17031245-ATTTTT-A,ATT 17×T***
6459723-T-C 6591682-T-C ***
16514304-ATGTGTGTG-A,ATGTG 14402424-ATGTGTGTG-A,ATGTG 18×TG***
15479942-CTTT-C 13368062-CTTT-C 21×T***
17923789-AGAAG-A,AGAAAGAAAGAAG 15811909-AGAAG-A,AGAAAGAAAGAAG ***
10789374-C-G ***
18890882-ATTTT-A 16779002-ATTTT-A 17×T***
15928371-CTTTT-C 13816491-CTTTT-C 26×T***
8428944-CAA-C 8560903-CAA-C 25×A***
22812629-C-CT 20650743-C-CT 28×T***
56742724-A-G ***
56833129-CCCATT-C ***
7717635-C-CTT,CTTTCCTTTCCT 7849594-C-CTT,CTTTCCTTTCCT ***
16704379-G-T 14592499-G-T ***
16590873-CAAAA-C,CAAA 14478993-CAAAA-C,CAAA 17×A***
56858369-AAAGAAAGG-A,AAAGAAAG ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 299991987913680594387931867
Used in age calculations987913680594387931867
Counts of SNPs3428
Variant counts last updated 2018-06-07 22:57:04.



Big Tree Main Page