Bosch
BigY3: 362045, BigY2: 362045MDKA Birth: Germany
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 362045 | BigY2 362045 |
---|---|---|---|---|---|---|---|---|---|
18368634-T-TTG | 16256754-T-TTG | P6_Prx | 17×TG | A* | |||||
13687769-A-C | 11532093-A-C | DYZ17 | A* | ||||||
5349961-G-A | 5481920-G-A | FT132998 | A* | ||||||
28817895-T-A | 26671748-T-A | A* | |||||||
19719399-T-C | 17607519-T-C | P5_Prx | A* | A* | |||||
20643042-T-A | 18481156-T-A | P4_Prx | A* | A* | |||||
25879866-T-C | 23733719-T-C | P1_Y1 | A* | A* | |||||
25957285-G-A | 23811138-G-A | P1_Y1 | A* | A* | |||||
26389116-G-A | 24242969-G-A | P1_Y1 | A* | A* | |||||
28817026-G-A | 26670879-G-A | A* | A* | ||||||
9361295-C-T | 9523686-C-T | 4540516-T-C | BY34442 | Y | A* | ||||
16097564-A-C | 13985684-A-C | P8_Prx | A* | ||||||
19643700-C-T | 17531820-C-T | P5_Prx | A* | ||||||
20536078-G-A | 18374192-G-A | P5_Dst | A* | ||||||
13862123-A-G | 11741417-A-G | BY50613 | DYZ17 | + | + | ||||
10872962-T-C | FT434945 | + | |||||||
6040238-G-A | 6172197-G-A | FT97810 | + | ** | |||||
7209050-G-C | 7341009-G-C | BY63917 | Y | Y | + | + | |||
8665842-C-T | 8797801-C-T | BY75051 | Y | Y | + | + | |||
8969909-C-A | 9132300-C-A | BY76959 | ** | + | |||||
9838718-C-T | 10001109-C-T | BY81330 | Y | Y | + | + | |||
13224460-T-C | 11068784-T-C | BY84636 | + | + | |||||
13572748-C-T | 11417072-C-T | FT445581 | + | ** | |||||
13670214-C-T | 11514538-C-T | BY87781 | DYZ17 | + | + | ||||
13670627-C-G | 11514951-C-G | FT447816 | DYZ17 | + | + | ||||
14469839-GT-G | 12349108-GT-G | ** | + | ||||||
14515985-TAAAC-T | 12404186-TAAAC-T | + | + | ||||||
14818691-A-G | 12706762-A-G | BY97766 | Y | Y | + | + | |||
15441380-T-C | 13329500-T-C | BY101598 | Y | Y | + | + | |||
15456139-T-C | 13344259-T-C | BY101674 | Y | Y | + | + | |||
15513802-T-G | 13401922-T-G | BY102118 | Y | Y | + | + | |||
16733728-T-C | 14621848-T-C | FT98232 | Y | Y | + | ** | |||
16770380-AC-A | 14658500-AC-A | + | + | ||||||
16858278-T-C | 14746398-T-C | BY110628 | Y | Y | + | + | |||
17367428-G-A | 15255548-G-A | BY114234 | Y | Y | + | + | |||
17871408-T-C | 15759528-T-C | BY117967 | Y | Y | + | + | |||
18225475-T-C | 16113595-T-C | BY55063 | Y | + | + | ||||
19093455-T-C | 16981575-T-C | BY126195 | Y | Y | + | + | |||
19415185-A-T | 17303305-A-T | FT98427 | Y | Y | + | ** | |||
20828972-T-C | 18667086-T-C | BY212705 | P4_Gap | + | + | ||||
21207025-C-T | 19045139-C-T | FT98444 | Y | Y | + | ** | |||
21262083-C-T | 19100197-C-T | BY131549 | Y | Y | + | + | |||
21480171-C-A | 19318285-C-A | BY133225 | Y | Y | + | + | |||
21485370-C-T | 19323484-C-T | BY133301 | Y | Y | + | + | |||
22228556-A-G | 20066670-A-G | BY213221 | DYZ19 | + | + | ||||
22443335-C-G | 20281449-C-G | BY219229 | DYZ19 | ** | + | ||||
22489275-A-T | 20327389-A-T | BY225067 | DYZ19 | + | |||||
22858044-G-A | 20696158-G-A | BY141262 | Y | Y | + | + | |||
23024952-C-A | 20863066-C-A | BY142389 | Y | Y | + | + | |||
23987542-C-A | 21841395-C-A | BY149049 | Y | + | + | ||||
12361-C-T | ** | + | |||||||
3619411-G-A | 3751370-G-A | FT97523 | + | ||||||
4384582-G-GA | 4516541-G-GA | + | |||||||
5706866-C-G | 5838825-C-G | FT97769 | + | ||||||
7630807-C-T | 7762766-C-T | FT97900 | Y | + | |||||
10667065-A-G | FT428681 | + | |||||||
13583395-A-T | 11427719-A-T | FT445813 | + | ||||||
15988072-G-A | 13876192-G-A | FT98179 | Y | Y | + | ||||
3413677-G-T | 3545636-G-T | * | |||||||
13455805-A-G | 11300129-A-G | BY85446 | * | ||||||
22279347-G-C | 20117461-G-C | DYZ19 | * | ||||||
22279348-C-A | 20117462-C-A | DYZ19 | * | ||||||
22316679-A-T | 20154793-A-T | DYZ19 | * | ||||||
4446690-G-GA | 4578649-G-GA | 9×A | * | ||||||
10687334-A-G | * | ||||||||
58819703-C-A | 56771168-G-T | ** | |||||||
8085516-C-CT | 8217475-C-CT | 19×T | ** | ||||||
22297891-G-A | 20136005-G-A | DYZ19 | ** | ||||||
8057337-C-T | 8189296-C-T | FT310920 | ** | ||||||
16084176-C-A | 13972296-C-A | FGC78622 | ** | ||||||
16101327-ATCTC-A | 13989447-ATCTC-A | P8_Prx | 13×TC | ** | |||||
20340126-C-T | 18178240-C-T | P5_Dst | ** | ||||||
24245716-A-T | 22099569-A-T | FGC42958 | P3_b1 | ** | |||||
24245661-A-T | 22099514-A-T | FGC51267 | P3_b1 | ** | |||||
15179986-C-CAA | 13068072-C-CAA | 15×A | ** | ||||||
5426382-C-A | 5558341-C-A | ** | |||||||
10940338-C-G | ** | ||||||||
11001836-A-G | ** | ||||||||
11001851-A-C | ** | ||||||||
10771935-T-C | ** | ||||||||
13372061-C-A | 11216385-C-A | ** | |||||||
14743709-C-A | 12631778-C-A | ** | |||||||
10684994-C-T | ** | ||||||||
10685003-T-A | ** | ||||||||
16860782-AAG-A | 14748902-AAG-A | ** | |||||||
10671019-T-C | ** | ||||||||
18687719-C-CA | 16575839-C-CA | ** | |||||||
10670969-T-G | ** | ||||||||
10925486-T-A | ** | ||||||||
11671400-GGAATC-G | DYZ17 | ** | |||||||
10925555-G-T | ** | ||||||||
24518004-C-A | 22371857-C-A | ** | |||||||
10982920-C-A | ** | ||||||||
15423176-G-T | 13311296-G-T | ** | |||||||
10770590-C-T | ** | ||||||||
5458510-C-A | 5590469-C-A | ** | |||||||
6332662-AC-A | 6464621-AC-A | IR3_Dst | ** | ||||||
4919396-G-T | 5051355-G-T | ** | |||||||
20340112-T-G | 18178226-T-G | P5_Dst | ** | ||||||
28483573-C-A | 26337426-C-A | ** | |||||||
18901112-C-A | 16789232-C-A | ** | |||||||
20711549-T-TG | 18549663-T-TG | P4_Prx | ** | ||||||
3093790-G-C | 3225749-G-C | ** | |||||||
3093798-T-G | 3225757-T-G | ** | |||||||
13884210-A-C | 11763504-A-C | ** | |||||||
17597956-T-A | 15486076-T-A | ** | |||||||
18955857-T-TA | 16843977-T-TA | 10×A | ** | ||||||
28558920-C-A | 26412773-C-A | ** | |||||||
28658426-C-A | 26512279-C-A | ** | |||||||
27398546-G-A | 25252399-G-A | P1_g3 | ** | ||||||
28006374-AC-A | 25860227-AC-A | P1_Y2 | ** | ||||||
56771164-G-T | ** | ||||||||
10994249-G-A | ** | ||||||||
3109107-G-T | 3241066-G-T | ** | |||||||
11022088-C-T | ** | ||||||||
21306615-AAAG-A | 19144729-AAAG-A | ** | |||||||
8351581-C-A | 8483540-C-A | ** | |||||||
10805827-T-G | ** | ||||||||
20404507-C-A | 18242621-C-A | P5_Dst | ** | ||||||
10895860-C-T | ** | ||||||||
20635015-G-T | 18473129-G-T | P4_Prx | ** | ||||||
11035311-T-C | ** | ||||||||
10653108-C-T | ** | ||||||||
15189656-T-G | 13077742-T-G | ** | |||||||
6693059-C-A | 6825018-C-A | ** | |||||||
10970734-T-G | ** | ||||||||
4229428-A-T | 4361387-A-T | ** | |||||||
13257552-A-C | 11101876-A-C | ** | |||||||
11669301-C-A | DYZ17 | ** | |||||||
5828974-C-A | 5960933-C-A | ** | |||||||
7044212-G-T | 7176171-G-T | ** | |||||||
19290508-C-G | 17178628-C-G | ** | |||||||
28147146-A-T | 26000999-A-T | P1_b4 | ** | ||||||
28147150-A-T | 26001003-A-T | P1_b4 | ** | ||||||
19847692-C-A | 17735812-C-A | P5_Prx | ** | ||||||
11038179-A-CTGCTC | ** | ||||||||
2730110-C-T | 2862069-C-T | ** | |||||||
3407905-C-A | 3539864-C-A | ** | |||||||
22949878-C-A | 20787992-C-A | 23×T | ** | ||||||
8969529-G-T | 9131920-G-T | ** | |||||||
21426975-G-T | 19265089-G-T | ** | |||||||
17128535-CTTTT-C | 15016655-CTTTT-C | 25×T | ** | ||||||
11022104-T-A | ** | ||||||||
11022130-C-CTG | ** | ||||||||
11022131-CAT-C | ** | ||||||||
28585774-C-A | 26439627-C-A | ** | |||||||
10895789-T-G | ** | ||||||||
14512005-G-T | 12400210-G-T | ** | |||||||
10771879-C-T | ** | ||||||||
13209439-C-A | 11053763-C-A | ** | |||||||
10992866-C-A | FT439529 | ** | |||||||
17143888-C-A | 15032008-C-A | ** | |||||||
22176203-C-A | 20014317-C-A | ** | |||||||
4178814-C-A | 4310773-C-A | ** | |||||||
14226587-C-A | 12105881-C-A | ** | |||||||
10926719-A-G | ** | ||||||||
10677841-C-A | ** | ||||||||
10884721-C-A | ** | ||||||||
16048873-C-A | 13936993-C-A | ** | |||||||
10685316-C-A | ** | ||||||||
13456923-TTTCCA-T | 11301247-TTTCCA-T | ** | |||||||
10754986-C-T | ** | ||||||||
56838593-C-A | ** | ||||||||
7704809-C-A | 7836768-C-A | ** | |||||||
10999949-C-G | ** | ||||||||
4700407-C-A | 4832366-C-A | ** | |||||||
6275752-A-T | 6407711-A-T | IR3_Dst | ** | ||||||
20340114-A-T | 18178228-A-T | P5_Dst | ** | ||||||
26228716-TGAG-T | 24082569-TGAG-T | P1_Y1 | ** | ||||||
11001852-A-T | ** | ||||||||
4437862-C-A | 4569821-C-A | ** | |||||||
15881884-A-C | 13770004-A-C | ** | |||||||
8854301-C-A | 8986260-C-A | ** | |||||||
19271542-C-A | 17159662-C-A | ** | |||||||
16095227-G-T | 13983347-G-T | ** | |||||||
3721465-C-A | 3853424-C-A | ** | |||||||
13941664-A-T | 11820958-A-T | ** | |||||||
4502899-G-T | 4634858-G-T | ** | |||||||
11035274-T-C | ** | ||||||||
28147148-G-T | 26001001-G-T | P1_b4 | ** | ||||||
14074089-C-A | 11953383-C-A | ** | |||||||
2970082-C-A | 3102041-C-A | ** | |||||||
10771872-G-A | ** | ||||||||
16520847-G-T | 14408967-G-T | ** | |||||||
28521651-C-G | 26375504-C-G | ** | |||||||
10785695-C-A | ** | ||||||||
15557995-C-A | 13446115-C-A | ** | |||||||
22273562-C-A | 20111676-C-A | DYZ19 | ** | ||||||
10657244-C-A | ** | ||||||||
7107576-C-A | 7239535-C-A | ** | |||||||
15355089-C-A | 13243208-C-A | ** | |||||||
10677095-G-A | ** | ||||||||
4133346-C-A | 4265305-C-A | ** | |||||||
56823102-G-T | ** | ||||||||
5674617-C-A | 5806576-C-A | ** | |||||||
11038160-C-A | ** | ||||||||
11038174-C-T | ** | ||||||||
23807575-TCTC-T | 21645689-TCTC-T | ** | |||||||
4804669-C-A | 4936628-C-A | ** | |||||||
9416869-C-A | 9579260-C-A | ** | |||||||
56840160-G-T | ** | ||||||||
10657424-C-A | ** | ||||||||
10660720-C-A | ** | ||||||||
15541698-AT-A | 13429818-AT-A | ** | |||||||
10775461-C-A | ** | ||||||||
10964597-C-A | ** | ||||||||
4174972-T-A | 4306931-T-A | ** | |||||||
24363885-C-A | 22217738-C-A | ** | |||||||
10991546-G-T | ** | ||||||||
17597947-T-A | 15486067-T-A | ** | |||||||
7102458-C-A | 7234417-C-A | ** | |||||||
2785284-TTTTTCAGCAGTGTATTGTAGTTTTCCTTGTAGAGATC-T | 2917243-TTTTTCAGCAGTGTATTGTAGTTTTCCTTGTAGAGATC-T | ** | |||||||
2966474-T-A | 3098433-T-A | ** | |||||||
3079457-C-A | 3211416-C-A | ** | |||||||
3176448-A-T | 3308407-A-T | ** | |||||||
3235405-C-A | 3367364-C-A | ** | |||||||
3276202-C-A | 3408161-C-A | ** | |||||||
3550349-G-A | 3682308-G-A | ** | |||||||
3641391-C-A | 3773350-C-A | ** | |||||||
3951538-T-G | 4083497-T-G | ** | |||||||
4077607-C-A | 4209566-C-A | ** | |||||||
4113069-C-A | 4245028-C-A | ** | |||||||
4136167-C-A | 4268126-C-A | ** | |||||||
4142334-G-A | 4274293-G-A | ** | |||||||
4201671-C-A | 4333630-C-A | ** | |||||||
4201752-C-A | 4333711-C-A | ** | |||||||
4202359-A-G | 4334318-A-G | ** | |||||||
4334599-G-T | 4466558-G-T | ** | |||||||
4416677-G-T | 4548636-G-T | ** | |||||||
4426089-A-C | 4558048-A-C | ** | |||||||
4465202-A-G | 4597161-A-G | ** | |||||||
4521492-A-C | 4653451-A-C | ** | |||||||
4792375-T-G | 4924334-T-G | ** | |||||||
4908137-C-T | 5040096-C-T | ** | |||||||
4959907-C-A | 5091866-C-A | ** | |||||||
5017561-G-T | 5149520-G-T | ** | |||||||
5017670-T-C | 5149629-T-C | ** | |||||||
5035364-T-A | 5167323-T-A | ** | |||||||
5060182-C-A | 5192141-C-A | ** | |||||||
5200266-A-C | 5332225-A-C | ** | |||||||
5446287-T-A | 5578246-T-A | ** | |||||||
5449980-T-A | 5581939-T-A | ** | |||||||
5513111-C-A | 5645070-C-A | ** | |||||||
5606154-C-A | 5738113-C-A | ** | |||||||
5716008-T-C | 5847967-T-C | ** | |||||||
5716239-A-T | 5848198-A-T | ** | |||||||
5720884-T-A | 5852843-T-A | ** | |||||||
5824753-C-T | 5956712-C-T | FT93803 | ** | ||||||
6156669-A-T | 6288628-A-T | IR3_Dst | ** | ||||||
6156690-C-G | 6288649-C-G | IR3_Dst | ** | ||||||
6156704-A-T | 6288663-A-T | IR3_Dst | ** | ||||||
6156705-A-T | 6288664-A-T | IR3_Dst | ** | ||||||
6156711-A-T | 6288670-A-T | IR3_Dst | ** | ||||||
6156728-A-T | 6288687-A-T | IR3_Dst | ** | ||||||
6202168-G-T | 6334127-G-T | IR3_Dst | ** | ||||||
6245756-C-A | 6377715-C-A | IR3_Dst | ** | ||||||
6275751-A-T | 6407710-A-T | IR3_Dst | ** | ||||||
6275766-A-T | 6407725-A-T | IR3_Dst | ** | ||||||
6275777-C-G | 6407736-C-G | IR3_Dst | ** | ||||||
6275782-G-T | 6407741-G-T | IR3_Dst | ** | ||||||
6275787-A-T | 6407746-A-T | IR3_Dst | ** | ||||||
6275801-A-T | 6407760-A-T | IR3_Dst | ** | ||||||
6339208-G-T | 6471167-G-T | IR3_Dst | ** | ||||||
6339219-C-A | 6471178-C-A | IR3_Dst | ** | ||||||
6339221-T-A | 6471180-T-A | IR3_Dst | ** | ||||||
6339231-T-A | 6471190-T-A | IR3_Dst | ** | ||||||
6339241-T-A | 6471200-T-A | IR3_Dst | ** | ||||||
6339248-T-A | 6471207-T-A | IR3_Dst | ** | ||||||
6339263-T-A | 6471222-T-A | IR3_Dst | ** | ||||||
6535360-C-A | 6667319-C-A | ** | |||||||
6634277-T-A | 6766236-T-A | ** | |||||||
6682205-C-A | 6814164-C-A | ** | |||||||
6748677-A-T | 6880636-A-T | ** | |||||||
6790490-G-T | 6922449-G-T | ** | |||||||
6978381-C-G | 7110340-C-G | ** | |||||||
7040287-G-T | 7172246-G-T | ** | |||||||
7045149-G-T | 7177108-G-T | ** | |||||||
7142275-C-A | 7274234-C-A | ** | |||||||
7159111-C-A | 7291070-C-A | ** | |||||||
7202216-C-A | 7334175-C-A | ** | |||||||
7236471-T-G | 7368430-T-G | ** | |||||||
7253942-T-C | 7385901-T-C | ** | |||||||
7319290-C-A | 7451249-C-A | ** | |||||||
7360567-T-C | 7492526-T-C | 13×A | ** | ||||||
7409488-A-T | 7541447-A-T | ** | |||||||
7990374-C-T | 8122333-C-T | ** | |||||||
8842335-G-T | 8974294-G-T | ** | |||||||
9055263-G-T | ** | ||||||||
9416851-A-T | 9579242-A-T | ** | |||||||
9438093-CTTTCTCT-C | 9600484-CTTTCTCT-C | ** | |||||||
9670362-A-T | 9832753-A-T | IR3_Prx | ** | ||||||
9670378-A-T | 9832769-A-T | IR3_Prx | ** | ||||||
9670385-A-T | 9832776-A-T | IR3_Prx | ** | ||||||
9670391-A-T | 9832782-A-T | IR3_Prx | ** | ||||||
9670392-A-T | 9832783-A-T | IR3_Prx | ** | ||||||
9764190-C-T | 9926581-C-T | ** | |||||||
9826025-C-G | 9988416-C-G | ** | |||||||
9826047-A-T | 9988438-A-T | ** | |||||||
9928437-C-A | 10090828-C-A | ** | |||||||
10039908-C-A | 10202299-C-A | ** | |||||||
10651573-C-A | ** | ||||||||
10653407-C-A | ** | ||||||||
10654374-T-G | ** | ||||||||
10661139-C-A | ** | ||||||||
10665893-C-A | ** | ||||||||
10678096-G-T | ** | ||||||||
10684766-C-A | ** | ||||||||
10685006-C-G | ** | ||||||||
10747592-T-C | ** | ||||||||
10757239-C-A | ** | ||||||||
10771920-C-T | ** | ||||||||
10789139-CCATT-C | ** | ||||||||
10790233-C-A | ** | ||||||||
10803517-T-C | ** | ||||||||
10804837-T-G | ** | ||||||||
10808948-C-A | ** | ||||||||
10821767-C-A | ** | ||||||||
10835101-C-G | ** | ||||||||
10841081-C-A | ** | ||||||||
10841646-C-A | ** | ||||||||
10842435-C-A | ** | ||||||||
10860712-T-G | ** | ||||||||
10866024-T-G | ** | ||||||||
10866238-CTTCCATTCCATTCCATTCCATTCCATTCCACTCCA-C | ** | ||||||||
10868813-C-T | ** | ||||||||
10899500-G-T | ** | ||||||||
10913049-C-A | ** | ||||||||
10914299-A-G | FT272261 | ** | |||||||
10925593-C-A | ** | ||||||||
10925593-CTGTTCCATACTG-C | ** | ||||||||
10925608-CCGT-C | ** | ||||||||
10929698-A-T | ** | ||||||||
10939739-C-A | ** | ||||||||
10949825-T-C | ** | ||||||||
10950923-C-G | ** | ||||||||
10951726-A-G | ** | ||||||||
10974235-T-G | ** | ||||||||
10974419-C-A | ** | ||||||||
10977083-C-A | ** | ||||||||
10986511-C-A | ** | ||||||||
10986654-N-C | ** | ||||||||
10992877-C-A | ** | ||||||||
10992895-C-A | ** | ||||||||
10995892-C-A | ** | ||||||||
10998767-T-A | ** | ||||||||
11004393-GCCATTCCATTCCATTCCATTCCATTCCATT-G | ** | ||||||||
11019921-A-T | ** | ||||||||
11020266-TC-T | ** | ||||||||
11035263-A-C | ** | ||||||||
11035270-T-A | ** | ||||||||
11035276-C-G | ** | ||||||||
13194787-C-G | 11039111-C-G | ** | |||||||
13234619-C-G | 11078943-C-G | ** | |||||||
13238240-A-G | 11082564-A-G | ** | |||||||
13258717-G-A | 11103041-G-A | ** | |||||||
13696504-G-T | 11540828-G-T | DYZ17 | ** | ||||||
13704698-G-T | 11549022-G-T | DYZ17 | ** | ||||||
11646531-C-A | DYZ17 | ** | |||||||
11646627-G-T | FT165092 | DYZ17 | ** | ||||||
13857713-C-A | 11737007-C-A | FTB55062 | DYZ17 | ** | |||||
13880017-C-A | 11759311-C-A | ** | |||||||
13961809-C-A | 11841103-C-A | ** | |||||||
14079664-A-T | 11958958-A-T | ** | |||||||
14283630-G-T | 12162924-G-T | ** | |||||||
14284678-C-A | 12163972-C-A | ** | |||||||
14285796-C-A | 12165090-C-A | ** | |||||||
14339168-C-A | 12218463-C-A | ** | |||||||
14546761-A-T | 12434962-A-T | ** | |||||||
14620948-C-A | 12509146-C-A | ** | |||||||
14639226-A-C | 12527295-A-C | ** | |||||||
14721567-T-C | 12609635-T-C | ** | |||||||
14741639-C-A | 12629707-C-A | ** | |||||||
14743021-G-C | 12631089-G-C | ** | |||||||
14788770-C-A | 12676841-C-A | ** | |||||||
14815994-C-A | 12704065-C-A | ** | |||||||
14994102-A-G | 12882187-A-G | ** | |||||||
15210847-A-T | 13098933-A-T | ** | |||||||
15370802-C-A | 13258922-C-A | ** | |||||||
15370862-G-T | 13258982-G-T | ** | |||||||
15394419-G-T | 13282539-G-T | ** | |||||||
15394482-C-A | 13282602-C-A | FT143826 | ** | ||||||
15397813-A-T | 13285933-A-T | ** | |||||||
15435239-G-T | 13323359-G-T | ** | |||||||
15650454-C-A | 13538574-C-A | ** | |||||||
15677345-A-T | 13565465-A-T | ** | |||||||
15864107-A-T | 13752227-A-T | ** | |||||||
15921852-T-C | 13809972-T-C | ** | |||||||
15922461-G-A | 13810581-G-A | ** | |||||||
16008755-C-A | 13896875-C-A | ** | |||||||
16013740-G-T | 13901860-G-T | ** | |||||||
16028316-T-G | 13916436-T-G | ** | |||||||
16060465-C-A | 13948585-C-A | ** | |||||||
16320432-T-A | 14208552-T-A | ** | |||||||
16603318-C-A | 14491438-C-A | ** | |||||||
16654714-C-A | 14542834-C-A | ** | |||||||
16701807-G-A | 14589927-G-A | FGC35119 | ** | ||||||
16881634-C-A | 14769754-C-A | ** | |||||||
16884005-G-T | 14772125-G-T | ** | |||||||
17142133-T-C | 15030253-T-C | ** | |||||||
17215850-C-A | 15103970-C-A | ** | |||||||
17215908-T-G | 15104028-T-G | ** | |||||||
17250232-G-T | 15138352-G-T | ** | |||||||
17380762-G-T | 15268882-G-T | ** | |||||||
17492278-G-T | 15380398-G-T | ** | |||||||
17504054-G-T | 15392174-G-T | ** | |||||||
17538083-T-A | 15426203-T-A | ** | |||||||
17547668-C-A | 15435788-C-A | ** | |||||||
17597950-C-A | 15486070-C-A | ** | |||||||
17666707-C-A | 15554827-C-A | ** | |||||||
17783064-G-T | 15671184-G-T | ** | |||||||
17867507-A-C | 15755627-A-C | ** | |||||||
17876242-C-A | 15764362-C-A | ** | |||||||
18088407-T-G | 15976527-T-G | ** | |||||||
18088409-T-G | 15976529-T-G | ** | |||||||
18093958-G-T | 15982078-G-T | ** | |||||||
18309886-A-T | 16198006-A-T | P6_Prx | ** | ||||||
18309898-C-A | 16198018-C-A | P6_Prx | ** | ||||||
18343567-G-T | 16231687-G-T | P6_Prx | ** | ||||||
18407034-A-G | 16295154-A-G | P6_Gap | ** | ||||||
18596392-C-A | 16484512-C-A | ** | |||||||
18627639-C-A | 16515759-C-A | ** | |||||||
18743344-C-T | 16631464-C-T | ** | |||||||
18756185-G-T | 16644305-G-T | ** | |||||||
19121993-C-A | 17010113-C-A | ** | |||||||
19128659-T-C | 17016779-T-C | ** | |||||||
19302128-C-A | 17190248-C-A | ** | |||||||
19358114-C-A | 17246234-C-A | ** | |||||||
19507062-T-A | 17395182-T-A | ** | |||||||
19598783-A-C | 17486903-A-C | P5_Prx | ** | ||||||
19600448-TA-T | 17488568-TA-T | P5_Prx | ** | ||||||
19623503-A-G | 17511623-A-G | P5_Prx | ** | ||||||
19724583-T-A | 17612703-T-A | P5_Prx | ** | ||||||
19724590-T-A | 17612710-T-A | P5_Prx | ** | ||||||
19724595-T-A | 17612715-T-A | P5_Prx | ** | ||||||
19724622-T-A | 17612742-T-A | P5_Prx | ** | ||||||
19855478-C-A | 17743598-C-A | P5_Prx | ** | ||||||
19855482-A-T | 17743602-A-T | P5_Prx | ** | ||||||
19926886-G-T | 17815006-G-T | P5_Prx | ** | ||||||
19965495-C-A | 17853615-C-A | P5_Prx | ** | ||||||
20255076-T-A | 18093190-T-A | P5_Dst | ** | ||||||
20255115-T-A | 18093229-T-A | P5_Dst | ** | ||||||
20330532-A-G | 18168646-A-G | P5_Dst | ** | ||||||
20340119-T-C | 18178233-T-C | P5_Dst | ** | ||||||
20340124-T-G | 18178238-T-G | P5_Dst | ** | ||||||
20473366-G-T | 18311480-G-T | P5_Dst | ** | ||||||
20621489-T-A | 18459603-T-A | P4_Prx | ** | ||||||
20621500-G-T | 18459614-G-T | P4_Prx | ** | ||||||
20621511-T-A | 18459625-T-A | P4_Prx | ** | ||||||
20621517-G-T | 18459631-G-T | P4_Prx | ** | ||||||
20621529-C-A | 18459643-C-A | P4_Prx | ** | ||||||
20621537-T-A | 18459651-T-A | P4_Prx | ** | ||||||
20621539-T-A | 18459653-T-A | P4_Prx | ** | ||||||
20621542-G-C | 18459656-G-C | P4_Prx | ** | ||||||
20621547-T-A | 18459661-T-A | P4_Prx | ** | ||||||
20621555-C-A | 18459669-C-A | P4_Prx | ** | ||||||
20634996-A-T | 18473110-A-T | P4_Prx | ** | ||||||
20635013-A-T | 18473127-A-T | P4_Prx | ** | ||||||
21164684-C-A | 19002798-C-A | ** | |||||||
21207566-T-G | 19045680-T-G | ** | |||||||
21363162-A-G | 19201276-A-G | ** | |||||||
21380623-G-T | 19218737-G-T | ** | |||||||
21796551-G-A | 19634665-G-A | F24700 | ** | ||||||
22065185-A-G | 19903299-A-G | ** | |||||||
22155455-A-T | 19993569-A-T | ** | |||||||
22297888-A-G | 20136002-A-G | DYZ19 | ** | ||||||
22297895-C-A | 20136009-C-A | Z45910 | DYZ19 | ** | |||||
22297899-C-T | 20136013-C-T | DYZ19 | ** | ||||||
22297903-T-A | 20136017-T-A | DYZ19 | ** | ||||||
22485561-T-C | 20323675-T-C | DYZ19 | ** | ||||||
22765516-G-T | 20603630-G-T | ** | |||||||
22834007-C-A | 20672121-C-A | ** | |||||||
23006592-C-A | 20844706-C-A | ** | |||||||
23144236-C-A | 20982350-C-A | ** | |||||||
23361676-T-A | 21199790-T-A | ** | |||||||
23415342-A-ATT | 21253456-A-ATT | 21×T | ** | ||||||
23723598-T-G | 21561712-T-G | ** | |||||||
23818418-G-T | 21656532-G-T | ** | |||||||
24072724-C-A | 21926577-C-A | P3_b1 | ** | ||||||
24072725-T-A | 21926578-T-A | P3_b1 | ** | ||||||
24245654-G-T | 22099507-G-T | P3_b1 | ** | ||||||
24245677-G-T | 22099530-G-T | P3_b1 | ** | ||||||
24245693-A-T | 22099546-A-T | P3_b1 | ** | ||||||
24245698-G-T | 22099551-G-T | P3_b1 | ** | ||||||
24245722-A-T | 22099575-A-T | P3_b1 | ** | ||||||
24245723-A-T | 22099576-A-T | P3_b1 | ** | ||||||
24245726-C-G | 22099579-C-G | P3_b1 | ** | ||||||
24296129-T-G | 22149982-T-G | P3_t1 | ** | ||||||
24363754-C-A | 22217607-C-A | ** | |||||||
24392028-A-C | 22245881-A-C | ** | ** | ||||||
24392029-AAGTACTTACAACACTTGGCCC-A | 22245882-AAGTACTTACAACACTTGGCCC-A | ** | ** | ||||||
24404318-C-A | 22258171-C-A | ** | |||||||
24450532-T-C | 22304385-T-C | ** | |||||||
24582483-A-C | 22436336-A-C | P3_t2 | ** | ||||||
24892497-G-T | 22746350-G-T | g1 | ** | ||||||
25966160-A-C | 23820013-A-C | P1_Y1 | ** | ||||||
25966170-T-G | 23820023-T-G | P1_Y1 | ** | ||||||
25966177-T-G | 23820030-T-G | P1_Y1 | ** | ||||||
25988495-C-A | 23842348-C-A | P1_Y1 | ** | ||||||
26085532-A-G | 23939385-A-G | P1_Y1 | ** | ||||||
26199717-A-T | 24053570-A-T | P1_Y1 | ** | ||||||
26199724-C-A | 24053577-C-A | P1_Y1 | ** | ||||||
26199739-G-T | 24053592-G-T | P1_Y1 | ** | ||||||
26320961-C-A | 24174814-C-A | P1_Y1 | ** | ||||||
27155037-T-G | 25008890-T-G | P1_g3 | ** | ||||||
27810333-GAAGG-T | 25664186-GAAGG-T | P1_Y2 | ** | ||||||
27828710-AAAAAAC-A | 25682563-AAAAAAC-A | P1_Y2 | ** | ||||||
27876645-A-T | 25730498-A-T | P1_Y2 | ** | ||||||
27876661-A-T | 25730514-A-T | P1_Y2 | ** | ||||||
27876662-A-T | 25730515-A-T | P1_Y2 | ** | ||||||
27876666-G-T | 25730519-G-T | P1_Y2 | ** | ||||||
27876680-A-T | 25730533-A-T | P1_Y2 | ** | ||||||
28102336-T-A | 25956189-T-A | P1_Y2 | ** | ||||||
28102357-G-T | 25956210-G-T | P1_Y2 | ** | ||||||
28147137-A-T | 26000990-A-T | P1_b4 | ** | ||||||
28511061-C-A | 26364914-C-A | ** | |||||||
28535644-T-G | 26389497-T-G | ** | |||||||
28583665-C-A | 26437518-C-A | ** | |||||||
28588106-C-A | 26441959-C-A | ** | |||||||
28606081-C-A | 26459934-C-A | ** | |||||||
28625849-T-G | 26479702-T-G | ** | |||||||
28754990-C-A | 26608843-C-A | ** | |||||||
28776141-C-A | 26629994-C-A | ** | |||||||
28798184-A-C | 26652037-A-C | ** | |||||||
28814951-G-T | 26668804-G-T | ** | |||||||
56678118-G-C | ** | ||||||||
56771208-G-T | ** | ||||||||
56771215-A-T | ** | ||||||||
56771216-G-T | ** | ||||||||
56839695-A-C | ** | ||||||||
56845342-A-G | ** | ||||||||
56846528-G-T | ** | ||||||||
56854792-C-G | ** | ||||||||
9524106-C-T | 9686497-C-T | ** | |||||||
20775186-G-A | 18613300-G-A | P4_Prx | ** | ||||||
3452154-C-T | 3584113-C-T | ** | |||||||
3543166-C-CAA | 3675125-C-CAA | 14×A | ** | ||||||
3889019-CTTTT-C | 4020978-CTTTT-C | 15×T | ** | ||||||
3901399-C-T | 4033358-C-T | ** | |||||||
5667411-G-GT | 5799370-G-GT | ** | |||||||
5701369-C-T | 5833328-C-T | ** | |||||||
9830370-T-C | 9992761-T-C | ** | |||||||
13485357-A-C | 11329681-A-C | ** | |||||||
14682883-G-A | 12570949-G-A | ** | |||||||
22480617-T-G | 20318731-T-G | DYZ19 | ** | ||||||
24267556-G-T | 22121409-G-T | P3_b1 | ** | ||||||
28076194-T-C | 25930047-T-C | P1_Y2 | ** | ||||||
28569533-A-G | 26423386-A-G | ** | |||||||
7867879-G-GGAAAGAAAGAAAGAAA | 7999838-G-GGAAAGAAAGAAAGAAA | 16×GAAA | *** | ||||||
8154134-C-CTT | 8286093-C-CTT | 16×T | *** | ||||||
14847004-CAAAAAA-C | 12735070-CAAAAAA-C | 20×A | *** | ||||||
7935855-TAAA-T | 8067814-TAAA-T | 22×A | *** | ||||||
7414277-CAAA-C | 7546236-CAAA-C | 27×A | *** | ||||||
2741101-CTT-C,CT | 2873060-CTT-C,CT | 19×T | *** | ||||||
10999865-A-G | *** | ||||||||
10999867-T-A | *** | ||||||||
13884911-C-A | 11764205-C-A | *** | |||||||
22951102-CT-C,CTT | 20789216-CT-C,CTT | 13×T | *** | ||||||
10776137-CTCAAT-C | *** | ||||||||
10887980-T-C | *** | ||||||||
13485585-C-A | 11329909-C-A | *** | |||||||
16288185-ATTT-A | 14176305-ATTT-A | 16×T | *** | ||||||
8016922-C-A | 8148881-C-A | *** | |||||||
8016924-C-A | 8148883-C-A | 8×T | *** | ||||||
10887994-C-A | *** | ||||||||
10878321-C-A | *** | ||||||||
16598984-CAAAAAA-C | 14487104-CAAAAAA-C | 25×A | *** | ||||||
10842489-T-C | *** | ||||||||
10842508-T-A | *** | ||||||||
19422051-C-A | 17310171-C-A | *** | |||||||
19050375-CTTT-C | 16938495-CTTT-C | 18×T | *** | ||||||
10808573-T-C | *** | ||||||||
22127975-CTTTTTT-C | 19966089-CTTTTTT-C | 20×T | *** | ||||||
16264562-C-A | 14152682-C-A | *** | |||||||
28722411-C-A | 26576264-C-A | *** | |||||||
14316186-CT-C,CTT | 12195480-CT-C,CTT | 14×T | *** | ||||||
10878271-T-C | *** | ||||||||
10878297-T-C | *** | ||||||||
10878311-C-T | *** | ||||||||
19302619-G-T | 17190739-G-T | *** | |||||||
10755392-A-C,CGT | *** | ||||||||
10664802-T-C | *** | ||||||||
21946945-A-ATT | 19785059-A-ATT | 15×T | *** | ||||||
21950228-C-A | 19788342-C-A | *** | |||||||
17703236-TAAAA-T | 15591356-TAAAA-T | 22×A | *** | ||||||
22815505-G-GTT | 20653619-G-GTT | 20×T | *** | ||||||
16545414-CAAAAAAAA-C | 14433534-CAAAAAAAA-C | 24×A | *** | ||||||
23623200-G-T | 21461314-G-T | *** | |||||||
14415573-A-AAT | 12294870-A-AAT | *** | |||||||
14697129-C-A | 12585195-C-A | *** | |||||||
8095379-T-C | 8227338-T-C | *** | |||||||
2740548-G-T | 2872507-G-T | *** | |||||||
2986322-C-A | 3118281-C-A | *** | |||||||
5534908-C-A | 5666867-C-A | *** | |||||||
7537655-C-A | 7669614-C-A | *** | |||||||
8124888-C-A | 8256847-C-A | *** | |||||||
8481967-TA-T,TAA | 8613926-TA-T,TAA | 15×A | *** | ||||||
8751094-A-G | 8883053-A-G | *** | |||||||
9499465-G-T | 9661856-G-T | *** | |||||||
9945377-A-G | 10107768-A-G | *** | |||||||
10768025-C-T | *** | ||||||||
10797541-C-A | *** | ||||||||
11016383-A-G | *** | ||||||||
11022824-C-A | *** | ||||||||
13482577-C-A | 11326901-C-A | *** | |||||||
11656491-C-A | DYZ17 | *** | |||||||
14144239-C-A | 12023533-C-A | *** | |||||||
14488533-A-G | 12367802-A-G | *** | |||||||
15041044-C-A | 12929134-C-A | *** | |||||||
17030992-CAAAAA-C,CAAAA | 14919112-CAAAAA-C,CAAAA | 19×A | *** | ||||||
18176570-C-A | 16064690-C-A | *** | |||||||
18949688-C-A | 16837808-C-A | *** | |||||||
18951759-T-C | 16839879-T-C | *** | |||||||
18953051-G-A | 16841171-G-A | *** | |||||||
19844880-G-T | 17733000-G-T | P5_Prx | *** | ||||||
21253814-G-T | 19091928-G-T | *** | |||||||
28640584-C-A | 26494437-C-A | *** | |||||||
56834983-C-T | *** | ||||||||
10789893-CTTCCATTCCA-C | *** | ||||||||
25720380-GA-G | 23574233-GA-G | P1_b3 | 9×A | *** | |||||
24886464-CAA-C | 22740317-CAA-C | g1 | 13×A | *** | |||||
10691173-A-T | *** | ||||||||
21134925-AT-A,ATT | 18973039-AT-A,ATT | 22×T | *** | ||||||
6786911-ATTT-A,AT | 6918870-ATTT-A,AT | 17×T | *** | ||||||
6816713-CAA-C,CA | 6948672-CAA-C,CA | 19×A | *** | ||||||
13950947-CTTT-C,CT | 11830241-CTTT-C,CT | 23×T | *** | ||||||
3490345-C-T | 3622304-C-T | *** | |||||||
5218706-C-A | 5350665-C-A | *** | |||||||
7646928-A-AT | 7778887-A-AT | 11×AT | *** | ||||||
7713479-C-G | 7845438-C-G | *** | |||||||
10866238-CTTCCATTCCATTCCATTCCATTCCATTCCACTCCA-C,CTTCCATTCCATTCCATTCCATTCCACACCACTCCC | *** | ||||||||
13299266-G-T | 11143590-G-T | *** | |||||||
13522567-T-A | 11366891-T-A | *** | |||||||
22476498-T-C | 20314612-T-C | DYZ19 | *** | ||||||
28566034-C-T | 26419887-C-T | *** | |||||||
56828244-C-A | *** | ||||||||
56861838-ACCTG-A,ACCTA | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.