Cain
FGC: G5VPS, FTDNA: B117286MDKA Birth:
IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | FGC G5VPS |
|---|---|---|---|---|---|---|---|
| hg19:Y:3428774-A-G hg38:Y:3560733-A-G | FGC73530 Y133858 | + | |||||
| hg19:Y:8781627-T-C hg38:Y:8913586-T-C | Y133889 FGC73531 | Y | Y | + | |||
| hg19:Y:13672495-A-T hg38:Y:11516819-A-T | Y133870 FGC73532 | DYZ17 | + | ||||
| hg19:Y:15064787-T-C hg38:Y:12952879-T-C | Y133884 FGC73533 | Y | Y | + | |||
| hg19:Y:16190953-C-A hg38:Y:14079073-C-A | Y133911 FGC73534 | Y | Y | + | |||
| hg19:Y:16672058-A-G hg38:Y:14560178-A-G | FGC73535 Y133873 | Y | Y | + | |||
| hg19:Y:16826550-A-G hg38:Y:14714670-A-G | Y133896 FGC73536 | Y | Y | + | |||
| hg19:Y:18698395-A-C hg38:Y:16586515-A-C | Y133879 FGC73538 | Y | Y | + | |||
| hg19:Y:18989367-G-T hg38:Y:16877487-G-T | FGC73539 Y133866 | Y | + | ||||
| hg19:Y:21465397-T-C hg38:Y:19303511-T-C | Y133844 FGC73540 | Y | Y | + | |||
| hg19:Y:24402798-T-G hg38:Y:22256651-T-G | Y133872 FGC73542 | + | |||||
| hg19:Y:18381216-G-A hg38:Y:16269336-G-A | FGC73537 | P6_Prx | * | ||||
| hg19:Y:27503694-T-C hg38:Y:25357547-T-C | FGC73543 | P1_Y2 | * | ||||
| hg19:Y:4974043-AT-A hg38:Y:5106002-AT-A | * | ||||||
| hg19:Y:5374969-CAAT-C hg38:Y:5506928-CAAT-C | * | ||||||
| hg19:Y:7832170-CTCTTTCTT-C hg38:Y:7964129-CTCTTTCTT-C | 12×TCTT | ** | |||||
| hg19:Y:15507539-A-AACAC hg38:Y:13395659-A-AACAC | 16×AC | ** | |||||
| hg19:Y:23838135-G-A hg38:Y:21676249-G-A | FT292638 | ** | |||||
| hg19:Y:2672424-T-C hg38:Y:2804383-T-C | ** | ||||||
| hg19:Y:2672425-T-C hg38:Y:2804384-T-C | ** | ||||||
| hg19:Y:2698561-C-T hg38:Y:2830520-C-T | ** | ||||||
| hg19:Y:2698564-A-C hg38:Y:2830523-A-C | ** | ||||||
| hg19:Y:3458683-C-T hg38:Y:3590642-C-T | ** | ||||||
| hg19:Y:3458724-A-T hg38:Y:3590683-A-T | ** | ||||||
| hg19:Y:4228970-G-A hg38:Y:4360929-G-A | ** | ||||||
| hg19:Y:5014977-C-T hg38:Y:5146936-C-T | ** | ||||||
| hg19:Y:6498945-C-T hg38:Y:6630904-C-T | ** | ||||||
| hg19:Y:7576240-T-C hg38:Y:7708199-T-C | ** | ||||||
| hg19:Y:10019221-C-A hg38:Y:10181612-C-A | ** | ||||||
| hg19:Y:13447434-G-A hg38:Y:11291758-G-A | ** | ||||||
| hg19:Y:14631399-T-A hg38:Y:12519468-T-A | ** | ||||||
| hg19:Y:19099937-A-G hg38:Y:16988057-A-G | ** | ||||||
| hg19:Y:21998588-G-A hg38:Y:19836702-G-A | ** | ||||||
| hg19:Y:22690583-G-A hg38:Y:20528697-G-A | ** | ||||||
| hg19:Y:28507966-G-A hg38:Y:26361819-G-A | FTB30760 | ** | |||||
| hg19:Y:4265253-G-GGA hg38:Y:4397212-G-GGA | ** | ||||||
| hg19:Y:13142934-C-T hg38:Y:10632420-C-T | *** | ||||||
| hg19:Y:24672340-A-G hg38:Y:22526193-A-G | FGC40635 | P3_b2 | *** | ||||
| hg19:Y:58843260-C-A hg38:Y:56747611-G-T | *** | ||||||
| hg19:Y:13143076-T-C hg38:Y:10632562-T-C | *** | ||||||
| hg19:Y:4236304-A-AAT hg38:Y:4368263-A-AAT | 9×AT | *** | |||||
| hg19:Y:9923914-A-G hg38:Y:10086305-A-G | *** | ||||||
| hg19:Y:28794959-TG-T hg38:Y:26648812-TG-T | *** | ||||||
| hg19:Y:22228067-G-A hg38:Y:20066181-G-A | DYZ19 | *** | |||||
| hg19:Y:59000266-C-T hg38:Y:56854119-C-T | *** | ||||||
| hg19:Y:28253537-G-A hg38:Y:26107390-G-A | P1_b4 | *** | |||||
| hg19:Y:59000213-T-C hg38:Y:56854066-T-C | *** | ||||||
| hg19:Y:59000277-C-A hg38:Y:56854130-C-A | *** | ||||||
| hg19:Y:59024598-T-C hg38:Y:56878451-T-C | *** | ||||||
| hg19:Y:22446145-GT-G hg38:Y:20284259-GT-G | DYZ19 | *** | |||||
| hg19:Y:58979660-CT-TA hg38:Y:56833513-CT-TA | *** | ||||||
| hg19:Y:58862633-C-G hg38:Y:56728238-G-C | *** | ||||||
| hg19:Y:58980039-CGCCATTCCA-TTCCTTTACT hg38:Y:56833892-CGCCATTCCA-TTCCTTTACT | *** | ||||||
| hg19:Y:22989187-T-G hg38:Y:20827301-T-G | *** | ||||||
| hg19:Y:58885068-T-C hg38:Y:56705803-A-G | *** | ||||||
| hg19:Y:9923873-G-A hg38:Y:10086264-G-A | *** | ||||||
| hg19:Y:58979629-C-T hg38:Y:56833482-C-T | *** | ||||||
| hg19:Y:13450069-TTCCA-CTCCT hg38:Y:11294393-TTCCA-CTCCT | *** | ||||||
| hg19:Y:58979621-ATAACC-A hg38:Y:56833474-ATAACC-A | *** | ||||||
| hg19:Y:13868585-GA-CG hg38:Y:11747879-GA-CG | DYZ17 | *** | |||||
| hg19:Y:58979208-CGT-TTA hg38:Y:56833061-CGT-TTA | *** | ||||||
| hg19:Y:13452538-C-T hg38:Y:11296862-C-T | *** | ||||||
| hg19:Y:9923940-C-G hg38:Y:10086331-C-G | *** | ||||||
| hg19:Y:13140455-AT-GC hg38:Y:10629941-AT-GC | *** | ||||||
| hg19:Y:22366228-GTTAC-TTTAA hg38:Y:20204342-GTTAC-TTTAA | DYZ19 | *** | |||||
| hg19:Y:58884330-GTA-TTC hg38:Y:56706539-TAC-GAA | *** | ||||||
| hg19:Y:28785739-A-T hg38:Y:26639592-A-T | *** | ||||||
| hg19:Y:28785760-CGGA-TGGT hg38:Y:26639613-CGGA-TGGT | *** | ||||||
| hg19:Y:13466283-A-G hg38:Y:11310607-A-G | *** | ||||||
| hg19:Y:9577474-A-C hg38:Y:9739865-A-C | IR3_Prx | *** | |||||
| hg19:Y:22366274-G-A hg38:Y:20204388-G-A | DYZ19 | *** | |||||
| hg19:Y:13466302-TT-GA hg38:Y:11310626-TT-GA | *** | ||||||
| hg19:Y:58972948-CGG-GTT hg38:Y:56826801-CGG-GTT | *** | ||||||
| hg19:Y:13868599-ACG-CGT hg38:Y:11747893-ACG-CGT | DYZ17 | *** | |||||
| hg19:Y:22366189-C-G hg38:Y:20204303-C-G | DYZ19 | *** | |||||
| hg19:Y:3082525-A-G hg38:Y:3214484-A-G | *** | ||||||
| hg19:Y:3229154-CAAAAAAA-C hg38:Y:3361113-CAAAAAAA-C | 20×A | *** | |||||
| hg19:Y:59019511-AAC-A hg38:Y:56873364-AAC-A | 20×AC | *** | |||||
| hg19:Y:13466303-T-A hg38:Y:11310627-T-A | *** | ||||||
| hg19:Y:14297986-A-G hg38:Y:12177280-A-G | *** | ||||||
| hg19:Y:14457387-CAAAAA-C hg38:Y:12336660-CAAAAA-C | 18×A | *** | |||||
| hg19:Y:9923998-A-T hg38:Y:10086389-A-T | *** | ||||||
| hg19:Y:9923931-A-C hg38:Y:10086322-A-C | *** | ||||||
| hg19:Y:21096718-T-G hg38:Y:18934832-T-G | *** | ||||||
| hg19:Y:9923910-T-G hg38:Y:10086301-T-G | *** | ||||||
| hg19:Y:14610585-T-C hg38:Y:12498787-T-C | *** | ||||||
| hg19:Y:2698586-G-A hg38:Y:2830545-G-A | *** | ||||||
| hg19:Y:2773660-C-G hg38:Y:2905619-C-G | *** | ||||||
| hg19:Y:3460703-T-G hg38:Y:3592662-T-G | *** | ||||||
| hg19:Y:3460712-T-C hg38:Y:3592671-T-C | *** | ||||||
| hg19:Y:3460714-T-G hg38:Y:3592673-T-G | *** | ||||||
| hg19:Y:3603881-G-C hg38:Y:3735840-G-C | *** | ||||||
| hg19:Y:3635961-A-T hg38:Y:3767920-A-T | *** | ||||||
| hg19:Y:3650928-G-C hg38:Y:3782887-G-C | *** | ||||||
| hg19:Y:3808948-G-C hg38:Y:3940907-G-C | *** | ||||||
| hg19:Y:3873471-A-T hg38:Y:4005430-A-T | *** | ||||||
| hg19:Y:3943237-T-A hg38:Y:4075196-T-A | *** | ||||||
| hg19:Y:4163414-C-T hg38:Y:4295373-C-T | *** | ||||||
| hg19:Y:4227002-A-T hg38:Y:4358961-A-T | *** | ||||||
| hg19:Y:4284831-T-C hg38:Y:4416790-T-C | *** | ||||||
| hg19:Y:4378779-C-G hg38:Y:4510738-C-G | *** | ||||||
| hg19:Y:4432069-A-T hg38:Y:4564028-A-T | *** | ||||||
| hg19:Y:4621357-A-C hg38:Y:4753316-A-C | *** | ||||||
| hg19:Y:5809783-T-C hg38:Y:5941742-T-C | *** | ||||||
| hg19:Y:6008799-T-A hg38:Y:6140758-T-A | *** | ||||||
| hg19:Y:6093645-T-C hg38:Y:6225604-T-C | *** | ||||||
| hg19:Y:6108500-C-G hg38:Y:6240459-C-G | *** | ||||||
| hg19:Y:6108526-A-T hg38:Y:6240485-A-T | *** | ||||||
| hg19:Y:6155420-A-G hg38:Y:6287379-A-G | IR3_Dst | *** | |||||
| hg19:Y:6177140-C-T hg38:Y:6309099-C-T | IR3_Dst | *** | |||||
| hg19:Y:6188031-T-A hg38:Y:6319990-T-A | IR3_Dst | *** | |||||
| hg19:Y:6250446-T-G hg38:Y:6382405-T-G | IR3_Dst | *** | |||||
| hg19:Y:6250626-G-T hg38:Y:6382585-G-T | IR3_Dst | *** | |||||
| hg19:Y:6331639-G-C hg38:Y:6463598-G-C | IR3_Dst | *** | |||||
| hg19:Y:6683024-T-A hg38:Y:6814983-T-A | *** | ||||||
| hg19:Y:6713815-T-G hg38:Y:6845774-T-G | *** | ||||||
| hg19:Y:7476583-A-C hg38:Y:7608542-A-C | IR1_L | *** | |||||
| hg19:Y:8816176-A-C hg38:Y:8948135-A-C | *** | ||||||
| hg19:Y:9063348-A-T hg38:Y:9225739-A-T | *** | ||||||
| hg19:Y:9295988-C-G hg38:Y:9458379-C-G | *** | ||||||
| hg19:Y:9487395-G-T hg38:Y:9649786-G-T | *** | ||||||
| hg19:Y:9577468-T-A hg38:Y:9739859-T-A | IR3_Prx | *** | |||||
| hg19:Y:9587932-C-G hg38:Y:9750323-C-G | IR3_Prx | *** | |||||
| hg19:Y:9669271-C-A hg38:Y:9831662-C-A | IR3_Prx | *** | |||||
| hg19:Y:9674939-G-A hg38:Y:9837330-G-A | IR3_Prx | *** | |||||
| hg19:Y:9702702-T-C hg38:Y:9865093-T-C | IR3_Prx | *** | |||||
| hg19:Y:9766768-A-G hg38:Y:9929159-A-G | *** | ||||||
| hg19:Y:9923869-C-G hg38:Y:10086260-C-G | *** | ||||||
| hg19:Y:9923886-G-T hg38:Y:10086277-G-T | *** | ||||||
| hg19:Y:9923934-A-C hg38:Y:10086325-A-C | *** | ||||||
| hg19:Y:9923936-G-A hg38:Y:10086327-G-A | *** | ||||||
| hg19:Y:9923937-T-A hg38:Y:10086328-T-A | *** | ||||||
| hg19:Y:9923939-T-A hg38:Y:10086330-T-A | *** | ||||||
| hg19:Y:9923945-C-G hg38:Y:10086336-C-G | *** | ||||||
| hg19:Y:9923956-T-A hg38:Y:10086347-T-A | *** | ||||||
| hg19:Y:9923974-A-C hg38:Y:10086365-A-C | *** | ||||||
| hg19:Y:9923999-A-C hg38:Y:10086390-A-C | *** | ||||||
| hg19:Y:9924005-A-T hg38:Y:10086396-A-T | *** | ||||||
| hg19:Y:9947907-G-A hg38:Y:10110298-G-A | FT49982 | *** | |||||
| hg19:Y:9947916-T-C hg38:Y:10110307-T-C | *** | ||||||
| hg19:Y:9947923-G-A hg38:Y:10110314-G-A | *** | ||||||
| hg19:Y:9947935-G-A hg38:Y:10110326-G-A | *** | ||||||
| hg19:Y:9947942-A-G hg38:Y:10110333-A-G | *** | ||||||
| hg19:Y:9947944-A-G hg38:Y:10110335-A-G | *** | ||||||
| hg19:Y:9947952-C-T hg38:Y:10110343-C-T | *** | ||||||
| hg19:Y:10021323-C-G hg38:Y:10183714-C-G | *** | ||||||
| hg19:Y:10066320-A-T hg38:Y:10228711-A-T | *** | ||||||
| hg19:Y:13429533-A-C hg38:Y:11273857-A-C | *** | ||||||
| hg19:Y:13446610-C-G hg38:Y:11290934-C-G | *** | ||||||
| hg19:Y:13446611-A-T hg38:Y:11290935-A-T | *** | ||||||
| hg19:Y:13447232-C-T hg38:Y:11291556-C-T | *** | ||||||
| hg19:Y:13517520-G-T hg38:Y:11361844-G-T | *** | ||||||
| hg19:Y:14119312-T-C hg38:Y:11998606-T-C | *** | ||||||
| hg19:Y:14134977-G-T hg38:Y:12014271-G-T | *** | ||||||
| hg19:Y:14213317-T-A hg38:Y:12092611-T-A | *** | ||||||
| hg19:Y:14631348-T-C hg38:Y:12519417-T-C | *** | ||||||
| hg19:Y:14631391-A-C hg38:Y:12519460-A-C | *** | ||||||
| hg19:Y:14631943-A-G hg38:Y:12520012-A-G | *** | ||||||
| hg19:Y:14631955-T-C hg38:Y:12520024-T-C | *** | ||||||
| hg19:Y:14631957-T-C hg38:Y:12520026-T-C | *** | ||||||
| hg19:Y:15233128-G-T hg38:Y:13121214-G-T | *** | ||||||
| hg19:Y:15797097-G-A hg38:Y:13685217-G-A | *** | ||||||
| hg19:Y:15797114-C-T hg38:Y:13685234-C-T | *** | ||||||
| hg19:Y:16080562-G-A hg38:Y:13968682-G-A | *** | ||||||
| hg19:Y:16382899-T-C hg38:Y:14271019-T-C | *** | ||||||
| hg19:Y:16994947-T-G hg38:Y:14883067-T-G | *** | ||||||
| hg19:Y:17249840-C-T hg38:Y:15137960-C-T | *** | ||||||
| hg19:Y:17641243-T-A hg38:Y:15529363-T-A | *** | ||||||
| hg19:Y:17699305-T-A hg38:Y:15587425-T-A | *** | ||||||
| hg19:Y:17999009-G-A hg38:Y:15887129-G-A | P7_Gap | *** | |||||
| hg19:Y:18527072-A-T hg38:Y:16415192-A-T | P6_Dst | *** | |||||
| hg19:Y:18622789-T-A hg38:Y:16510909-T-A | *** | ||||||
| hg19:Y:18844121-G-A hg38:Y:16732241-G-A | *** | ||||||
| hg19:Y:18844181-A-T hg38:Y:16732301-A-T | *** | ||||||
| hg19:Y:18849091-T-C hg38:Y:16737211-T-C | *** | ||||||
| hg19:Y:18902351-C-T hg38:Y:16790471-C-T | *** | ||||||
| hg19:Y:19099886-A-G hg38:Y:16988006-A-G | *** | ||||||
| hg19:Y:19099912-C-T hg38:Y:16988032-C-T | *** | ||||||
| hg19:Y:19662986-C-T hg38:Y:17551106-C-T | P5_Prx | *** | |||||
| hg19:Y:20243996-A-T hg38:Y:18082110-A-T | P5_Dst | *** | |||||
| hg19:Y:20420491-T-C hg38:Y:18258605-T-C | P5_Dst | *** | |||||
| hg19:Y:20648369-G-T hg38:Y:18486483-G-T | P4_Prx | *** | |||||
| hg19:Y:20707895-T-G hg38:Y:18546009-T-G | P4_Prx | *** | |||||
| hg19:Y:20895000-G-T hg38:Y:18733114-G-T | P4_Dst | *** | |||||
| hg19:Y:21391518-A-T hg38:Y:19229632-A-T | *** | ||||||
| hg19:Y:21887636-G-A hg38:Y:19725750-G-A | *** | ||||||
| hg19:Y:21998732-T-C hg38:Y:19836846-T-C | *** | ||||||
| hg19:Y:22001464-C-A hg38:Y:19839578-C-A | *** | ||||||
| hg19:Y:22195001-A-C hg38:Y:20033115-A-C | *** | ||||||
| hg19:Y:22270365-C-A hg38:Y:20108479-C-A | DYZ19 | *** | |||||
| hg19:Y:22270375-G-T hg38:Y:20108489-G-T | DYZ19 | *** | |||||
| hg19:Y:22431277-C-A hg38:Y:20269391-C-A | DYZ19 | *** | |||||
| hg19:Y:22489102-A-G hg38:Y:20327216-A-G | DYZ19 | *** | |||||
| hg19:Y:22623508-A-T hg38:Y:20461622-A-T | *** | ||||||
| hg19:Y:22989195-T-G hg38:Y:20827309-T-G | *** | ||||||
| hg19:Y:23121211-C-G hg38:Y:20959325-C-G | *** | ||||||
| hg19:Y:23320539-G-C hg38:Y:21158653-G-C | *** | ||||||
| hg19:Y:23441412-T-A hg38:Y:21279526-T-A | *** | ||||||
| hg19:Y:23773729-T-G hg38:Y:21611843-T-G | *** | ||||||
| hg19:Y:24069436-A-G hg38:Y:21923289-A-G | P3_b1 | *** | |||||
| hg19:Y:24078051-A-G hg38:Y:21931904-A-G | P3_b1 | *** | |||||
| hg19:Y:24102104-A-G hg38:Y:21955957-A-G | P3_b1 | *** | |||||
| hg19:Y:24147610-A-C hg38:Y:22001463-A-C | P3_b1 | *** | |||||
| hg19:Y:24147702-A-T hg38:Y:22001555-A-T | P3_b1 | *** | |||||
| hg19:Y:24166953-A-G hg38:Y:22020806-A-G | P3_b1 | *** | |||||
| hg19:Y:24278582-A-T hg38:Y:22132435-A-T | P3_b1 | *** | |||||
| hg19:Y:24339344-T-A hg38:Y:22193197-T-A | P3_t1 | *** | |||||
| hg19:Y:24339425-A-C hg38:Y:22193278-A-C | P3_t1 | *** | |||||
| hg19:Y:24388147-C-A hg38:Y:22242000-C-A | *** | ||||||
| hg19:Y:24637379-A-G hg38:Y:22491232-A-G | P3_t2 | *** | |||||
| hg19:Y:24637412-T-G hg38:Y:22491265-T-G | P3_t2 | *** | |||||
| hg19:Y:24666659-A-C hg38:Y:22520512-A-C | P3_b2 | *** | |||||
| hg19:Y:24728393-C-T hg38:Y:22582246-C-T | P3_b2 | *** | |||||
| hg19:Y:25100383-T-C hg38:Y:22954236-T-C | g1 | *** | |||||
| hg19:Y:25201529-A-T hg38:Y:23055382-A-T | g1 | *** | |||||
| hg19:Y:25534474-T-A hg38:Y:23388327-T-A | P1_gr1 | *** | |||||
| hg19:Y:25654072-T-C hg38:Y:23507925-T-C | P1_b3 | *** | |||||
| hg19:Y:25654119-G-A hg38:Y:23507972-G-A | P1_b3 | *** | |||||
| hg19:Y:25698364-C-T hg38:Y:23552217-C-T | P1_b3 | *** | |||||
| hg19:Y:25815757-T-C hg38:Y:23669610-T-C | P1_b3 | *** | |||||
| hg19:Y:25944946-C-T hg38:Y:23798799-C-T | P1_Y1 | *** | |||||
| hg19:Y:25973841-C-G hg38:Y:23827694-C-G | P1_Y1 | *** | |||||
| hg19:Y:25997927-T-C hg38:Y:23851780-T-C | P1_Y1 | *** | |||||
| hg19:Y:26032625-T-C hg38:Y:23886478-T-C | P1_Y1 | *** | |||||
| hg19:Y:26032723-G-T hg38:Y:23886576-G-T | P1_Y1 | *** | |||||
| hg19:Y:26110484-G-A hg38:Y:23964337-G-A | P1_Y1 | *** | |||||
| hg19:Y:26248062-T-G hg38:Y:24101915-T-G | P1_Y1 | *** | |||||
| hg19:Y:26249425-T-A hg38:Y:24103278-T-A | P1_Y1 | *** | |||||
| hg19:Y:26928632-T-A hg38:Y:24782485-T-A | P1_r3 | *** | |||||
| hg19:Y:27087411-C-T hg38:Y:24941264-C-T | P1_r4 | *** | |||||
| hg19:Y:27214105-G-T hg38:Y:25067958-G-T | P1_g3 | *** | |||||
| hg19:Y:27346784-A-T hg38:Y:25200637-A-T | P1_g3 | *** | |||||
| hg19:Y:27436231-C-G hg38:Y:25290084-C-G | P1_Y2 | *** | |||||
| hg19:Y:27595548-T-G hg38:Y:25449401-T-G | P1_Y2 | *** | |||||
| hg19:Y:27595591-A-G hg38:Y:25449444-A-G | P1_Y2 | *** | |||||
| hg19:Y:27883259-A-C hg38:Y:25737112-A-C | P1_Y2 | *** | |||||
| hg19:Y:28237869-T-C hg38:Y:26091722-T-C | P1_b4 | *** | |||||
| hg19:Y:28385606-T-A hg38:Y:26239459-T-A | P1_gr2 | *** | |||||
| hg19:Y:28524841-G-A hg38:Y:26378694-G-A | FT106403 | *** | |||||
| hg19:Y:58844585-C-G hg38:Y:56746286-G-C | *** | ||||||
| hg19:Y:58844615-C-G hg38:Y:56746256-G-C | *** | ||||||
| hg19:Y:58848050-C-A hg38:Y:56742821-G-T | *** | ||||||
| hg19:Y:58862684-G-T hg38:Y:56728187-C-A | *** | ||||||
| hg19:Y:58869363-C-T hg38:Y:56721508-G-A | *** | ||||||
| hg19:Y:58869381-C-T hg38:Y:56721490-G-A | *** | ||||||
| hg19:Y:58875002-T-G hg38:Y:56715869-A-C | *** | ||||||
| hg19:Y:58875013-A-G hg38:Y:56715858-T-C | *** | ||||||
| hg19:Y:59009412-A-C hg38:Y:56863265-A-C | *** | ||||||
| hg19:Y:59009534-C-G hg38:Y:56863387-C-G | *** | ||||||
| hg19:Y:59016262-C-T hg38:Y:56870115-C-T | *** | ||||||
| hg19:Y:59018444-G-C hg38:Y:56872297-G-C | *** | ||||||
| hg19:Y:59021712-G-A hg38:Y:56875565-G-A | *** | ||||||
| hg19:Y:59024125-T-A hg38:Y:56877978-T-A | *** | ||||||
| hg19:Y:9923920-T-TC hg38:Y:10086311-T-TC | *** | ||||||
| hg19:Y:9923931-AATAGGTCTC-CATCGAACAG hg38:Y:10086322-AATAGGTCTC-CATCGAACAG | *** | ||||||
| hg19:Y:2672424-TT-CC hg38:Y:2804383-TT-CC | *** | ||||||
| hg19:Y:2698561-CGAA-TGAC hg38:Y:2830520-CGAA-TGAC | *** | ||||||
| hg19:Y:4265251-T-TGG hg38:Y:4397210-T-TGG | *** | ||||||
| hg19:Y:4265255-A-AGC hg38:Y:4397214-A-AGC | *** | ||||||
| hg19:Y:4265260-G-GAA hg38:Y:4397219-G-GAA | *** | ||||||
| hg19:Y:4265263-A-AGG hg38:Y:4397222-A-AGG | *** | ||||||
| hg19:Y:4265264-G-GAA hg38:Y:4397223-G-GAA | *** | ||||||
| hg19:Y:5797434-G-GATATAT hg38:Y:5929393-G-GATATAT | 21×AT | *** | |||||
| hg19:Y:7832210-TTCTTTCTTTTTC-T hg38:Y:7964169-TTCTTTCTTTTTC-T | *** | ||||||
| hg19:Y:8333626-ACTTCTTCTTCTTCTT-A hg38:Y:8465585-ACTTCTTCTTCTTCTT-A | 25×CTT | *** | |||||
| hg19:Y:9923910-TGAAA-GGAAG hg38:Y:10086301-TGAAA-GGAAG | *** | ||||||
| hg19:Y:9923956-TCCAC-ACCAA hg38:Y:10086347-TCCAC-ACCAA | *** | ||||||
| hg19:Y:13329877-GTA-ATAAT hg38:Y:11174201-GTA-ATAAT | *** | ||||||
| hg19:Y:18050048-A-AATATATATATATATATATAT hg38:Y:15938168-A-AATATATATATATATATATAT | 19×AT | *** | |||||
| hg19:Y:19394060-T-TTTC hg38:Y:17282180-T-TTTC | *** | ||||||
| hg19:Y:24415718-T-TTATATA hg38:Y:22269571-T-TTATATA | 31×TA | *** | |||||
| hg19:Y:58872540-CGATGC-TGAAGA hg38:Y:56718326-GCATCG-TCTTCA | *** | ||||||
| hg19:Y:59000265-AC-CT hg38:Y:56854118-AC-CT | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: G5VPS | 15604984 | 9514325 | 8395568 |
| Used in age calculations | 15604984 | 9514325 | 8395568 |
| Counts of SNPs | 8 | 7 |
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