Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > FGC11134 > A353 > Z16250 > A114 > CTS4466/S1136 > S1115 > A212 > 7367197-CCTT-C > A206

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
21418
BigY2
21418
22313221-G-A 20151335-G-A DYZ19 A*
24303593-G-A 22157446-G-A P3_t1 A*
17329847-T-TAC 15217967-T-TAC 11×ACA*
20624942-A-G 18463056-A-G P4_Prx A*
19736631-T-C 17624751-T-C ZZ12 Y16482ZZ12_1 P5_Prx A*
22313425-T-A 20151539-T-A DYZ19 ***A*
22268289-C-A 20106403-C-A DYZ19 A*
22232710-G-A 20070824-G-A DYZ19 A*
28657166-T-TAC 26511019-T-TAC A*
21454202-T-A 19292316-T-A YYA*
26272432-A-G 24126285-A-G P1_Y1 ***A*
13698545-A-G 11542869-A-G A*
24365177-AAGAGAT-A 22219030-AAGAGAT-A 8×AGAGAT+*
16292546-A-ATT 14180666-A-ATT 48×T+
28787110-A-G 26640963-A-G A222 +*
14372969-A-G 12252265-A-G A208 YY+*
9162544-G-A 9324935-G-A A207 +*
15814116-CCAGA-C 13702236-CCAGA-C +*
7106982-G-GCT 7238941-G-GCT 15×CT+
16763254-A-C 14651374-A-C A293 YY+*
21477198-CCTT-C 19315312-CCTT-C 9×CTT+
19412070-G-A 17300190-G-A A213 YY+***
15873677-G-A 13761797-G-A A211 YY+*
8461434-G-A 8593393-G-A 6347953-G-AFGC14955 YY*
8228775-A-G 8360734-A-G 6347953-G-AFGC14954 YY*
13820775-TATGGAATGGA-T 11700069-TATGGAATGGA-T 11×ATGGA*
21070281-G-T 18908395-G-T 6347953-G-AFGC14980 YY*
23467640-G-C 21305754-G-C 6347953-G-AFGC14992 YY*
15407374-C-T 13295494-C-T L617FGC14936 YY*
17506827-C-T 15394947-C-T L617 FGC17249FGC14934 Y9056 YY*
6891098-G-A 7023057-G-A FGC14951FGC14951 YY*
9085947-G-A 9248338-G-A 6347953-G-AFGC14957 Y*
8466862-G-A 8598821-G-A L617L617 YY*
22769166-A-C 20607280-A-C 6347953-G-AFGC14988 YY*
22745552-G-A 20583666-G-A FGC14987 YY*
22460826-G-C 20298940-G-C 6347953-G-AFGC34800 DYZ19 *
21254923-T-G 19093037-T-G FGC14981 YY*
6773501-C-CTCTT 6905460-C-CTCTT 6×TCTT*
22487089-A-C 20325203-A-C 6347953-G-ABY32000 DYZ19 *
21463528-A-C 19301642-A-C 6347953-G-AFGC14983 YY*
9894932-G-A 10057323-G-A 6347953-G-AFGC14959 YY*
22148450-GA-G 19986564-GA-G *
16899034-G-C 14787154-G-C FGC14971 YY*
23623951-C-A 21462065-C-A 6347953-G-AFGC14993 YY*
21979659-G-A 19817773-G-A FGC14986 YY*
16962369-A-G 14850489-A-G 6347953-G-AFGC14972 YY*
7236915-C-T 7368874-C-T A336 Y***
6932503-G-C 7064462-G-C 6347953-G-AFGC14952 YY*
19105247-G-A 16993367-G-A 6347953-G-AFGC14978 YY*
26098903-G-A 23952756-G-A P1_Y1 ****
18985438-A-G 16873558-A-G 6347953-G-AFGC14977 YY*
28759258-A-G 26613111-A-G 6347953-G-AFGC14995 Y*
13814492-G-T 11693786-G-T 6347953-G-AFGC14963 *
7316980-A-C 7448939-A-C FGC14953 YY*
23989108-G-GA 21842961-G-GA *
14388311-G-A 12267607-G-A FGC14965 YY*
10913321-A-T **
10992704-T-A **
10939749-G-C **
10907824-C-T **
10990141-C-T **
10913349-A-G **
10921506-C-A **
10994228-T-G **
10929727-C-T **
11004428-T-A **
10985198-C-G **
10934627-A-G **
10939766-A-C **
10939753-T-A **
10950173-G-T **
10979024-C-A **
10963320-T-C **
10958514-T-C **
10950273-T-G **
10979487-C-A **
10985125-A-C **
10985131-C-T **
10939759-T-C **
10947359-A-T **
10947340-T-C **
10985135-A-G **
10940221-G-T **
10939789-T-C **
10971324-G-C **
10985147-TCCG-T **
10971330-A-C **
13452845-CCTCCTTTT-C 11297169-CCTCCTTTT-C **
11004429-C-CG **
14123834-C-A 12003128-C-A **
13811035-A-G 11690329-A-G **
13854498-A-T 11733792-A-T **
13855763-TGTAACCAAAG-T 11735057-TGTAACCAAAG-T **
13885521-G-T 11764815-G-T **
13885545-G-T 11764839-G-T **
13947958-T-A 11827252-T-A **
13976453-C-A 11855747-C-A **
14022948-C-A 11902242-C-A **
14032504-C-A 11911798-C-A **
14065813-G-T 11945107-G-T **
14065828-G-A 11945122-G-A **
14066916-C-T 11946210-C-T **
14115019-C-A 11994313-C-A Y90349 **
14128239-C-A 12007533-C-A **
11674463-C-A **
14142490-T-C 12021784-T-C **
14159557-C-A 12038851-C-A **
14181651-C-A 12060945-C-A **
14188043-C-A 12067337-C-A **
14225212-C-A 12104506-C-A **
14227560-C-A 12106854-C-A **
14253233-C-A 12132527-C-A **
14269478-G-T 12148772-G-T **
14269571-C-A 12148865-C-A **
14289391-C-T 12168685-C-T **
14289396-C-T 12168690-C-T **
14324370-T-A 12203664-T-A **
14328182-C-A 12207476-C-A **
11675340-T-C **
11666154-C-A **
11006276-C-A **
13253667-C-A 11097991-C-A **
11011255-G-T **
11012372-C-A **
11013655-G-T **
11016464-A-T **
10889704-C-A **
11019026-C-A **
11025498-C-A **
11027386-C-A **
11027871-G-T **
11027898-G-A **
11028172-C-A **
11038077-T-C **
13236248-C-A 11080572-C-A **
13322137-C-A 11166461-C-A **
11643584-G-T **
13330961-C-A 11175285-C-A **
13389710-G-C 11234034-G-C **
13460473-T-A 11304797-T-A **
13461599-T-A 11305923-T-A **
13468228-A-G 11312552-A-G **
13474453-T-C 11318777-T-C **
13474463-GAT-G 11318787-GAT-G **
13502502-C-A 11346826-C-A **
13525946-C-A 11370270-C-A **
13594359-C-T 11438683-C-T **
13604304-C-A 11448628-C-A **
13610983-C-A 11455307-C-A **
13642994-C-A 11487318-C-A **
10896309-A-G **
10847073-C-A **
10874464-T-C **
8720360-C-A 8852319-C-A **
7334113-C-A 7466072-C-A **
7360541-C-T 7492500-C-T **
7397648-G-A 7529607-G-A **
7397755-C-A 7529714-C-A **
7414013-G-A 7545972-G-A Y62025 **
7430499-C-A 7562458-C-A **
7541296-T-G 7673255-T-G **
7717882-T-C 7849841-T-C **
7783179-C-A 7915138-C-A **
8166744-C-T 8298703-C-T **
8691860-TA-T 8823819-TA-T **
8736967-C-A 8868926-C-A **
7186522-C-A 7318481-C-A **
8739807-T-G 8871766-T-G **
8766348-A-G 8898307-A-G **
8766373-T-G 8898332-T-G **
8848291-C-A 8980250-C-A **
8850047-G-A 8982006-G-A **
9111260-T-A **
8970637-C-A 9133028-C-A **
9079340-A-T 9241731-A-T **
9221815-A-G 9384206-A-G **
9321751-C-A 9484142-C-A **
9402550-T-G 9564941-T-G **
9409782-T-C 9572173-T-C **
7201476-C-A 7333435-C-A **
7183026-C-A 7314985-C-A **
9498931-T-A 9661322-T-A **
6776012-C-A 6907971-C-A **
6392567-C-A 6524526-C-A **
6424894-C-A 6556853-C-A **
6491371-T-C 6623330-T-C **
6529403-C-G 6661362-C-G **
6532933-G-T 6664892-G-T **
6593389-G-C 6725348-G-C **
6596032-C-A 6727991-C-A **
6644827-C-A 6776786-C-A **
6652426-A-C 6784385-A-C **
6729578-T-A 6861537-T-A **
6734781-T-C 6866740-T-C FGC14950 **
6752607-A-G 6884566-A-G **
6776352-C-A 6908311-C-A **
7142831-C-A 7274790-C-A **
6789286-C-A 6921245-C-A **
6791084-T-C 6923043-T-C **
6799246-C-G 6931205-C-G **
6825438-C-A 6957397-C-A **
6826974-G-T 6958933-G-T **
6920656-T-C 7052615-T-C **
6996774-C-T 7128733-C-T **
6996779-G-A 7128738-G-A **
6996787-G-T 7128746-G-T **
7021373-C-A 7153332-C-A **
7038418-C-A 7170377-C-A **
7138293-A-T 7270252-A-T **
9442255-AT-A 9604646-AT-A **
9511884-A-T 9674275-A-T **
10874370-C-A **
10844285-C-T **
10795716-C-A **
10795977-A-C **
10796119-T-G **
10797953-T-G **
10797961-A-T **
10804077-C-T **
10807043-C-A **
10814890-A-T **
10839978-A-C **
10840038-A-C **
10844269-A-C **
10844275-A-T **
10847071-T-A **
10780946-A-G **
10847107-C-T **
10850845-C-A **
10852298-C-A **
10865426-C-A **
10868130-A-C **
10868359-CAGTCA-C **
10870267-C-A **
10873832-A-C **
10873834-T-C **
10873838-T-A **
10873844-T-C **
10873849-T-C **
10785360-T-C **
10778769-C-A **
9513276-G-A 9675667-G-A **
10661431-G-C **
9583264-C-A 9745655-C-A IR3_Prx **
9928310-C-A 10090701-C-A **
9983402-A-T 10145793-A-T **
9986087-A-C 10148478-A-C **
9996011-T-G 10158402-T-G **
10011145-G-T 10173536-G-T **
10011167-A-T 10173558-A-T **
10654819-G-T **
10656504-G-T **
10658331-ACCATTCCATT-A **
10659165-C-T **
10660343-A-C **
10662134-T-TTAATTCCATTCCATTCCATTTCAC **
10778656-C-A **
10666633-G-T **
10746939-G-T **
10747039-A-C **
10753206-A-T **
10754889-A-C **
10757854-G-T **
10760749-A-G **
10760752-C-T **
10762745-C-A **
10767701-C-G **
10768177-C-A **
10772255-C-A **
14382125-G-T 12261421-G-T **
15218863-G-T 13106949-G-T **
14462613-T-C 12341886-T-C **
22012057-G-A 19850171-G-A **
21244131-C-A 19082245-C-A **
21391691-C-A 19229805-C-A **
21417946-T-C 19256060-T-C **
21455408-C-A 19293522-C-A **
21476294-C-G 19314408-C-G **
21551838-C-A 19389952-C-A **
21554825-T-G 19392939-T-G **
21603998-C-A 19442112-C-A **
21861485-C-A 19699599-C-A **
21996164-T-G 19834278-T-G **
22068636-TA-T 19906750-TA-T **
21155180-T-C 18993294-T-C **
22079901-C-A 19918015-C-A **
22149922-C-A 19988036-C-A **
22204258-C-T 20042372-C-T **
22209323-G-C 20047437-G-C **
22503710-G-T 20341824-G-T DYZ19 **
22503715-T-G 20341829-T-G DYZ19 **
22594501-C-A 20432615-C-A **
22689918-C-A 20528032-C-A **
22776918-C-A 20615032-C-A **
22787338-G-A 20625452-G-A **
22797555-T-C 20635669-T-C **
21201117-A-C 19039231-A-C **
21154656-C-A 18992770-C-A **
22988903-C-A 20827017-C-A **
20330278-T-C 18168392-T-C P5_Dst **
19438287-A-T 17326407-A-T **
19438292-G-A 17326412-G-A **
19449204-C-A 17337324-C-A **
19460423-A-G 17348543-A-G **
19843021-A-T 17731141-A-T P5_Prx **
19853715-A-T 17741835-A-T P5_Prx **
19853726-G-A 17741846-G-A P5_Prx **
19948311-C-T 17836431-C-T P5_Prx **
20020952-C-CTTT 17909072-C-CTTT P5_Prx 9×T**
20022391-G-T 17910511-G-T P5_Prx **
20104224-T-G 17992344-T-G P5_Dst 5×GAAA**
20364234-T-A 18202348-T-A P5_Dst **
21153358-G-T 18991472-G-T **
20364351-T-G 18202465-T-G P5_Dst **
20478270-C-T 18316384-C-T P5_Dst **
20478276-A-T 18316390-A-T P5_Dst **
20620900-C-A 18459014-C-A P4_Prx **
20620901-T-C 18459015-T-C P4_Prx **
20620907-A-AG 18459021-A-AG P4_Prx **
20692958-C-G 18531072-C-G P4_Prx **
20692966-A-AG 18531080-A-AG P4_Prx **
20707746-G-T 18545860-G-T P4_Prx **
21141386-T-A 18979500-T-A **
21141420-C-G 18979534-C-G **
22949874-C-T 20787988-C-T **
22989127-A-G 20827241-A-G **
19370284-A-T 17258404-A-T **
28596698-GTTTT-G 26450551-GTTTT-G 24×T**
27908263-T-TA 25762116-T-TA P1_Y2 **
28478237-C-A 26332090-C-A **
28481163-A-G 26335016-A-G **
28498022-C-A 26351875-C-A **
28532723-A-T 26386576-A-T **
28532913-C-G 26386766-C-G **
28532931-T-G 26386784-T-G **
28549879-G-T 26403732-G-T **
28551147-A-G 26405000-A-G **
28560968-C-A 26414821-C-A **
28589582-T-C 26443435-T-C **
28596736-A-T 26450589-A-T **
27570832-T-G 25424685-T-G P1_Y2 **
28598992-T-C 26452845-T-C **
28614790-G-A 26468643-G-A **
28656393-A-T 26510246-A-T **
28721498-T-C 26575351-T-C **
28768671-T-A 26622524-T-A **
56842403-G-T **
56847837-C-A **
56849662-T-A **
56869084-G-T **
56880222-C-A **
56886949-C-A **
27808449-A-G 25662302-A-G P1_Y2 **
26563908-C-A 24417761-C-A P1_g2 **
23034368-G-A 20872482-G-A **
23435881-T-C 21273995-T-C **
23046056-A-C 20884170-A-C **
23076306-C-A 20914420-C-A **
23091636-C-A 20929750-C-A **
23111832-C-A 20949946-C-A **
23126407-A-C 20964521-A-C **
23126492-C-T 20964606-C-T **
23203754-G-T 21041868-G-T **
23203789-G-T 21041903-G-T **
23252517-G-T 21090631-G-T **
23317708-T-G 21155822-T-G **
23401488-C-A 21239602-C-A **
23441361-T-C 21279475-T-C **
26428135-T-TC 24281988-T-TC P1_Y1 **
23648197-C-A 21486311-C-A **
23790366-C-A 21628480-C-A **
23875658-C-A 21713772-C-A **
21766754-A-AG **
24385025-T-G 22238878-T-G **
24390012-C-A 22243865-C-A **
24875544-C-T 22729397-C-T g1 **
25733114-G-T 23586967-G-T P1_b3 **
25880112-T-C 23733965-T-C P1_Y1 **
25944966-G-A 23798819-G-A P1_Y1 **
26153996-A-T 24007849-A-T P1_Y1 **
19370347-C-A 17258467-C-A **
19310192-C-A 17198312-C-A **
14473005-C-A 12352274-C-A **
15940030-G-A 13828150-G-A **
15491867-A-T 13379987-A-T **
15556797-G-A 13444917-G-A **
15696911-A-G 13585031-A-G **
15732159-C-A 13620279-C-A **
15733548-A-C 13621668-A-C **
15733877-C-T 13621997-C-T **
15743854-C-T 13631974-C-T **
15767093-C-A 13655213-C-A **
15790535-C-A 13678655-C-A **
15803660-C-T 13691780-C-T **
15866155-G-A 13754275-G-A **
16028459-T-A 13916579-T-A **
15423838-A-T 13311958-A-T **
16045696-C-A 13933816-C-A **
16090687-G-A 13978807-G-A **
16094767-A-T 13982887-A-T **
16118988-C-CT 14007108-C-CT P8_Prx **
16118992-CT-C 14007112-CT-C P8_Prx **
16176721-C-A 14064841-C-A **
16233424-C-A 14121544-C-A **
16240857-A-G 14128977-A-G **
16243119-C-A 14131239-C-A **
16423674-C-A 14311794-C-A **
16445617-C-A 14333737-C-A **
15431796-C-A 13319916-C-A **
15423777-G-T 13311897-G-T **
16612670-G-T 14500790-G-T **
14960283-T-A 12848358-T-A **
14533430-C-A 12421631-C-A **
14533446-C-A 12421647-C-A **
14539614-C-A 12427815-C-A **
14557747-C-A 12445948-C-A **
14566638-T-C 12454838-T-C **
14567038-A-T 12455238-A-T **
14700801-C-A 12588867-C-A **
14765031-C-A 12653100-C-A **
14825866-C-A 12713933-C-A **
14845351-T-A 12733417-T-A **
14880320-C-A 12768390-C-A **
12877311-A-AGC **
15396572-T-G 13284692-T-G **
15045458-AAGTTGTT-A 12933548-AAGTTGTT-A **
15111575-C-A 12999662-C-A **
15131680-T-C 13019767-T-C **
13045946-TCAA-T **
15168307-CA-C 13056393-CA-C **
15170926-T-C 13059012-T-C **
15193529-C-A 13081615-C-A **
15201455-A-G 13089541-A-G **
6128663-C-A 6260622-C-A **
15258522-TA-T 13146606-TA-T **
15290068-C-T 13178167-C-T **
16551081-C-A 14439201-C-A **
16620069-T-C 14508189-T-C A19227 **
19301516-G-T 17189636-G-T **
18647649-G-A 16535769-G-A **
18185622-G-T 16073742-G-T **
18201586-C-A 16089706-C-A **
18297941-G-T 16186061-G-T P6_Prx **
18354327-G-A 16242447-G-A P6_Prx **
18365456-C-A 16253576-C-A P6_Prx **
18391884-C-A 16280004-C-A P6_Gap **
18447665-G-T 16335785-G-T P6_Dst **
18461727-C-T 16349847-C-T P6_Dst **
18499998-C-A 16388118-C-A P6_Dst **
18585630-C-A 16473750-C-A **
18629416-C-A 16517536-C-A **
18791205-A-G 16679325-A-G **
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13484619-A-G 11328943-A-G ***
14761057-C-A 12649126-C-A ***
56833688-C-T ***
56833683-C-A ***
8326493-A-G 8458452-A-G ***
8907720-A-T 9039679-A-T ***
14656148-T-C 12544213-T-C ***
14586026-G-T 12474226-G-T ***
13512585-C-A 11356909-C-A ***
13236545-G-A 11080869-G-A ***
15279083-C-A 13167182-C-A ***
10788101-C-A ***
15396716-C-A 13284836-C-A ***
15927185-T-C 13815305-T-C FGC14968 ***
13855522-GATGGAATGGAATGGA-G 11734816-GATGGAATGGAATGGA-G 11×ATGGA***
10763159-T-A ***
21446259-G-T 19284373-G-T ***
3128140-C-A 3260099-C-A ***
15500756-C-A 13388876-C-A ***
3012654-C-A 3144613-C-A ***
56834779-G-GCGTTCCATTC 4×CATTC***
7255171-GT-G 7387130-GT-G ***
17313399-C-A 15201519-C-A Y71426 ***
10767676-C-A ***
10767675-C-G ***
21092210-G-T 18930324-G-T ***
7613830-T-A 7745789-T-A ***
13458648-T-C 11302972-T-C ***
7199199-C-T 7331158-C-T ***
13700358-C-G 11544682-C-G BY89018 ***
13457785-T-TGATTCCATTC 11302109-T-TGATTCCATTC ***
13817847-AGAATC-G 11697141-AGAATC-G ***
13808685-C-A 11687979-C-A 10×AATGG***
13808684-A-C 11687978-A-C ***
13865969-CGAATGGAATGGAATGGAATGGAATG-C 11745263-CGAATGGAATGGAATGGAATGGAATG-C 12×GAATG***
13801511-A-G 11680805-A-G ***
13693922-GGAATGCTATC-G 11538246-GGAATGCTATC-G ***
13676765-C-G 11521089-C-G ***
13479706-C-A 11324030-C-A ***
13479701-G-T 11324025-G-T ***
13473705-G-C 11318029-G-C F18179 ***
13461141-C-T 11305465-C-T ***
13461026-G-A 11305350-G-A ***
13450146-C-T 11294470-C-T ***
13821241-A-G 11700535-A-G ***
13446863-T-C 11291187-T-C ***
13446779-C-T 11291103-C-T ***
13140575-T-C 10630061-T-C ***
13138253-G-T 10627739-G-T ***
13138230-G-A 10627716-G-A BY209736 ***
13138209-CCCATT-C,TCCAAT 10627695-CCCATT-C,TCCAAT ***
13138183-C-T 10627669-C-T ***
13138168-C-T 10627654-C-T ***
13474545-C-T 11318869-C-T ***
13866697-T-A 11745991-T-A ***
22454453-C-G 20292567-C-G DYZ19 ***
13823135-C-A 11702429-C-A ***
13817935-C-A 11697229-C-A ***
13823122-C-G 11702416-C-G ***
7190738-C-A 7322697-C-A ***
23713748-ATG-A 21551862-ATG-A 19×TG***
13451191-T-C,TCCATTCTATTCCACTCCATTCCACTCCATTC 11295515-T-C,TCCATTCTATTCCACTCCATTCCACTCCATTC ***
58821406-G-C 56769465-C-G ***
58819449-T-A 56771422-A-T ***
58819414-A-T 56771457-T-A ***
58819412-C-T 56771459-G-A ***
28800254-G-A 26654107-G-A ***
28785968-G-A 26639821-G-A ***
26928181-T-A 24782034-T-A P1_r3 9×A***
17804388-G-T 15692508-G-T ***
17961095-A-G 15849215-A-G A351 ***
26282942-T-C 24136795-T-C P1_Y1 ***
24333195-CT-C 22187048-CT-C P3_t1 ***
22498768-C-G 20336882-C-G DYZ19 ***
13832647-C-G 11711941-C-G ***
22498760-A-G 20336874-A-G DYZ19 ***
22446463-A-T 20284577-A-T DYZ19 ***
22436124-C-G 20274238-C-G DYZ19 ***
22306281-C-T 20144395-C-T DYZ19 ***
22305818-G-T 20143932-G-T DYZ19 ***
22218383-T-G 20056497-T-G FGC24729 DYZ19 ***
21477223-CTTA-C,CTTC 19315337-CTTA-C,CTTC ***
9952221-C-A 10114612-C-A ***
13868296-G-GAATGGAATGA 11747590-G-GAATGGAATGA ***
18586724-A-G 16474844-A-G FGC14976 ***
13865840-C-T 11745134-C-T ***
13859779-C-G 11739073-C-G ***
13845643-C-A 11724937-C-A ***
13805396-TGAATG-C 11684690-TGAATG-C 11×GAATG***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 214181072542777673377844916
Kit: 21418975009779151807800407
Used in age calculations1072542779151807844916
Counts of SNPs2829
Variant counts last updated 2019-03-05 01:08:25.



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