Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > FGC11134 > FGC12055 > A353 > Z3026 > Z16250 > A114 > CTS4466/S1136 > S1115 > Z3023 > FGC84010 > A541 > A151 > FT11485 > FT74196 > BY21620

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
10505
BigY2
10505
BigY3
10505
20759217-C-T 18597331-C-T P4_Prx ***A*A*
23180985-T-C 21019099-T-C Y***A*A*
26260303-G-C 24114156-G-C P1_Y1 ***A*A*
58975626-C-T 56829479-C-T A*
59017560-G-A 56871413-G-A A*
59017699-G-A 56871552-G-A A*
26066376-C-T 23920229-C-T BY51493 P1_Y1 A*
56847660-G-T A*
20893454-C-CA 18731568-C-CA P4_Dst 10×AA*
13687025-C-A 11531349-C-A A*
20701205-A-T 18539319-A-T P4_Prx A*
20701214-C-T 18539328-C-T P4_Prx 13×TA*
56829397-T-C A*
56843007-G-T A*
56847611-C-G A*
17564884-G-T 15453004-G-T YYA*
20673812-C-T 18511926-C-T P4_Prx A*
26388582-C-CA 24242435-C-CA P1_Y1 15×AA*
19771511-G-A 17659631-G-A P5_Prx A*
20884957-G-A 18723071-G-A P4_Dst A*
4113260-C-G 4245219-C-G BY57987 +++
16767910-G-A 14656030-G-A BY109954 YY+++
17333326-A-G 15221446-A-G BY113915 YY+++
18903235-G-A 16791355-G-A BY124668 YY+++
18966024-T-TTCCA 16854144-T-TTCCA +***
23246011-C-G 21084125-C-G BY144042 YY+++
23761672-A-AAGC 21599786-A-AAGC +*
5613991-C-T 5745950-C-T TY9245 FGC1203 +
10061438-G-A 10223829-G-A FT265165 +
13356818-C-G 11201142-C-G FT265166 +
13910909-C-T 11790203-C-T FT76097 Y+
22303232-G-T 20141346-G-T DYZ19 ****
23761672-A-C 21599786-A-C YP1209 Y**
13449956-CCCATT-C 11294280-CCCATT-C *
18944408-CA-C 16832528-CA-C 10×A*
17946657-C-T 15834777-C-T FT147161 YY*
3400685-T-C 3532644-T-C *
23029071-T-A 20867185-T-A CTS11237 **
23029118-T-A 20867232-T-A CTS11238 **
9304444-C-G 9466835-C-G **
6010403-A-C 6142362-A-C PF166 **
7436544-C-A 7568503-C-A **
14538700-G-A 12426901-G-A Z5972 **
23249322-C-A 21087436-C-A **
27127602-ATTTCTTTC-A 24981455-ATTTCTTTC-A P1_g3 14×TTTC**
58976172-T-C 56830025-T-C **
18008645-C-CTT 15896765-C-CTT P7_Dst 30×T**
22316243-C-G 20154357-C-G DYZ19 **
4502770-A-G 4634729-A-G Z8343 **
6765638-CG-C 6897597-CG-C **
14492790-A-C 12380987-A-C **
18959213-T-C 16847333-T-C **
23505184-G-A 21343298-G-A **
14311874-TTTA-T 12191168-TTTA-T 6×TTA**
16480170-G-A 14368290-G-A **
21668833-C-A 19506947-C-A **
21922103-AG-A 19760217-AG-A **
7270318-C-T 7402277-C-T **
21306569-C-A 19144683-C-A **
21306573-C-A 19144687-C-A **
22263743-G-T 20101857-G-T DYZ19 **
17994829-G-A 15882949-G-A P7_Prx **
27889318-AAC-A 25743171-AAC-A P1_Y2 14×AC**
9040160-C-A 9202551-C-A **
5681800-C-CT 5813759-C-CT 10×T**
20865357-C-CACAT 18703471-C-CACAT P4_Dst **
16118570-ATTT-A 14006690-ATTT-A P8_Prx 31×T**
7195245-G-A 7327204-G-A **
13223476-A-G 11067800-A-G **
13725167-A-G 11569491-A-G FGC5029FGC50740 **
22287127-G-T 20125241-G-T DYZ19 **
26089608-C-T 23943461-C-T P1_Y1 **
21189667-TC-T 19027781-TC-T **
17136931-CTTTTT-C 15025051-CTTTTT-C 18×T**
17567388-C-A 15455508-C-A **
21556954-A-T 19395068-A-T **
16445864-C-A 14333984-C-A **
16046415-C-A 13934535-C-A **
10677745-CTCCAA-C **
21834243-C-A 19672357-C-A **
10868374-AAATGC-A **
9508017-AG-A 9670408-AG-A **
11022953-A-T **
13485716-C-T 11330040-C-T **
28776205-C-A 26630058-C-A **
4976787-C-A 5108746-C-A FTB44662 21×A**
7646589-C-A 7778548-C-A **
18361466-T-A 16249586-T-A P6_Prx **
10821869-T-A **
10632601-A-C **
18438210-CAAAA-C 16326330-CAAAA-C P6_Dst 25×A**
13486920-G-C 11331244-G-C **
10921078-C-A **
7165305-G-T 7297264-G-T **
9952474-C-A 10114865-C-A **
10924788-C-A **
15684247-C-A 13572367-C-A **
10888044-C-T **
18630663-T-G 16518783-T-G **
28808596-C-T 26662449-C-T **
10964553-A-C **
18630665-A-T 16518785-A-T **
17218290-G-T 15106410-G-T 9×T**
21002535-T-TTA 18840649-T-TTA P4_Dst 16×TC**
14106871-C-A 11986165-C-A **
13726098-A-T 11570422-A-T **
18891184-CTTT-C 16779304-CTTT-C 13×T**
21211821-C-A 19049935-C-A **
13485722-C-T 11330046-C-T **
16676626-C-A 14564746-C-A **
20893456-A-AG 18731570-A-AG P4_Dst **
10851022-A-T **
23052562-T-G 20890676-T-G **
8854202-C-A 8986161-C-A **
2729644-A-T 2861603-A-T **
10796113-A-T **
7160586-C-CTT 7292545-C-CTT 15×T**
28567953-C-A 26421806-C-A **
10780385-C-A **
13809599-C-A 11688893-C-A **
16667090-C-A 14555210-C-A **
10825625-T-A **
13573131-C-A 11417455-C-A **
22080459-C-A 19918573-C-A **
2767761-C-A 2899720-C-A **
18611608-C-A 16499728-C-A **
27966857-GTATATATATATATATA-G 25820710-GTATATATATATATATA-G P1_Y2 21×TA**
10978929-C-A **
7009231-C-A 7141190-C-A **
10847872-C-A **
15065966-C-A 12954058-C-A **
8699747-C-A 8831706-C-A **
7269798-A-T 7401757-A-T **
13486880-C-CT 11331204-C-CT 26×T**
13271194-G-T 11115518-G-T **
56835940-A-G **
5874278-C-A 6006237-C-A **
28808611-A-T 26662464-A-T **
17433934-C-A 15322054-C-A **
24512449-C-A 22366302-C-A **
15971225-C-CTT 13859345-C-CTT 18×T**
6177404-C-T 6309363-C-T IR3_Dst **
13394862-G-C 11239186-G-C **
11669467-C-A **
19206731-T-G 17094851-T-G **
14270587-C-A 12149881-C-A **
5523036-C-A 5654995-C-A **
7040047-G-T 7172006-G-T **
18630653-G-A 16518773-G-A **
24472447-GA-G 22326300-GA-G **
13809951-A-G 11689245-A-G **
4094504-C-A 4226463-C-A **
4554610-C-A 4686569-C-A **
15445590-A-G 13333710-A-G **
14080027-C-G 11959321-C-G **
7704947-C-A 7836906-C-A **
22901907-C-A 20740021-C-A **
4270621-C-A 4402580-C-A **
5817644-C-A 5949603-C-A **
10790240-A-G **
7939435-T-A 8071394-T-A **
10821878-A-T **
7433618-C-A 7565577-C-A **
14502566-C-A 12390771-C-A **
24884293-C-A 22738146-C-A g1 **
11022927-C-G **
10800541-T-A **
17440848-C-A 15328968-C-A **
18905309-C-A 16793429-C-A **
28720796-C-A 26574649-C-A **
27864384-T-TCTC 25718237-T-TCTC P1_Y2 **
10939624-T-C **
15045552-C-A 12933642-C-A **
28643591-C-A 26497444-C-A **
13883190-C-A 11762484-C-A **
23401415-C-A 21239529-C-A **
6097045-C-A 6229004-C-A **
14080032-G-A 11959326-G-A **
9890376-G-A 10052767-G-A **
18429197-A-AG 16317317-A-AG P6_Dst **
14467765-CA-C 12347034-CA-C 8×A**
7269804-A-T 7401763-A-T **
5999453-C-A 6131412-C-A **
14017642-C-A 11896936-C-A **
22263771-C-T 20101885-C-T DYZ19 **
22263773-G-A 20101887-G-A DYZ19 **
10961145-A-C **
19465494-C-A 17353614-C-A **
7320451-C-A 7452410-C-A **
14585668-G-T 12473868-G-T **
14039328-C-A 11918622-C-A **
23096673-C-A 20934787-C-A **
16002208-G-T 13890328-G-T **
15932407-C-A 13820527-C-A **
16146480-A-AAAGC 14034600-A-AAAGC P8_Dst **
14080009-C-G 11959303-C-G **
10800485-T-C **
14402417-C-A 12281714-C-A **
14564318-CA-C 12452518-CA-C 8×A**
4213160-G-T 4345119-G-T **
10800531-A-G **
6713158-C-A 6845117-C-A **
10683336-G-T **
13483308-C-T 11327632-C-T **
7236567-C-A 7368526-C-A **
14463384-C-A 12342657-C-A **
15712345-C-A 13600465-C-A **
11022926-C-T **
23026697-C-A 20864811-C-A **
10939608-A-T **
28513925-C-A 26367778-C-A **
6807946-C-A 6939905-C-A **
7166808-C-A 7298767-C-A **
4976784-T-A 5108743-T-A **
56831073-AATGC-A **
3440366-C-A 3572325-C-A **
14431192-C-G 12310465-C-G **
7105056-C-A 7237015-C-A **
19424424-C-A 17312544-C-A **
56831050-T-TCCATC **
21582576-G-T 19420690-G-T **
7156970-C-A 7288929-C-A **
14508461-C-A 12396666-C-A **
3804731-T-A 3936690-T-A **
14051791-C-A 11931085-C-A **
10980776-C-T **
9030259-G-T 9192650-G-T **
17821983-C-A 15710103-C-A **
10801689-T-G **
5180463-C-A 5312422-C-A **
14402439-C-A 12281736-C-A **
19410028-C-A 17298148-C-A **
14568789-C-A 12456989-C-A FT352632 **
21306584-T-C 19144698-T-C **
10801682-C-CGGAAG **
19244625-C-A 17132745-C-A **
25719242-T-A 23573095-T-A P1_b3 **
13249298-C-A 11093622-C-A **
7186174-C-A 7318133-C-A **
14073171-A-C 11952465-A-C **
14029340-C-A 11908634-C-A **
56835409-T-C **
22345987-C-T 20184101-C-T DYZ19 **
21170319-GTTT-G 19008433-GTTT-G 14×T**
23186054-C-A 21024168-C-A **
15995447-C-A 13883567-C-A **
5358468-A-G 5490427-A-G **
3285802-T-C 3417761-T-C **
11031422-A-T **
10801701-C-T **
10939628-A-T **
15392511-C-A 13280631-C-A **
7182990-C-A 7314949-C-A **
8181409-A-C 8313368-A-C **
2668975-C-A 2800934-C-A **
24732-T-G **
22296120-C-A 20134234-C-A DYZ19 **
15193548-C-A 13081634-C-A **
6147424-C-T 6279383-C-T IR3_Dst **
10632724-C-T **
5698958-G-T 5830917-G-T **
14559098-C-A 12447299-C-A **
7862138-C-A 7994097-C-A **
15816523-C-A 13704643-C-A **
8556207-C-A 8688166-C-A **
13895230-C-A 11774524-C-A **
14451088-C-A 12330361-C-A **
16272105-C-A 14160225-C-A **
13223481-A-G 11067805-A-G **
2901513-A-G 3033472-A-G **
3043874-A-G 3175833-A-G **
3043875-T-C 3175834-T-C **
3218209-C-A 3350168-C-A **
3218796-C-A 3350755-C-A FTB2085 **
3275372-G-T 3407331-G-T **
3521578-C-A 3653537-C-A **
3705295-C-A 3837254-C-A **
3834614-C-G 3966573-C-G **
4023973-C-A 4155932-C-A **
4259552-G-T 4391511-G-T **
4346465-C-A 4478424-C-A **
4426078-C-G 4558037-C-G **
4563395-G-T 4695354-G-T **
4567128-C-A 4699087-C-A **
4580420-T-C 4712379-T-C **
4735785-G-T 4867744-G-T **
4769029-C-A 4900988-C-A **
4799851-A-T 4931810-A-T **
4902259-C-T 5034218-C-T FTA52252 **
4908122-G-A 5040081-G-A **
4920207-G-T 5052166-G-T **
4920233-G-T 5052192-G-T **
4936986-T-C 5068945-T-C **
5067365-G-T 5199324-G-T **
5073775-C-A 5205734-C-A **
5079460-C-A 5211419-C-A **
5110480-C-A 5242439-C-A **
5187107-T-A 5319066-T-A **
5194245-G-T 5326204-G-T **
5263344-C-A 5395303-C-A **
5322912-C-A 5454871-C-A **
5336879-T-C 5468838-T-C **
5576265-ACCAGACCTCTC-A 5708224-ACCAGACCTCTC-A **
5613558-T-A 5745517-T-A **
5625611-C-A 5757570-C-A **
5826368-G-T 5958327-G-T **
5843202-C-A 5975161-C-A **
5907805-G-T 6039764-G-T **
5937189-T-A 6069148-T-A **
6147416-A-T 6279375-A-T IR3_Dst **
6147425-A-T 6279384-A-T IR3_Dst **
6147427-G-T 6279386-G-T BY59313 IR3_Dst **
6368147-C-A 6500106-C-A **
6454525-G-T 6586484-G-T **
6637213-T-C 6769172-T-C **
6637229-G-T 6769188-G-T **
6663926-T-C 6795885-T-C **
6692908-A-C 6824867-A-C **
6918317-A-T 7050276-A-T **
6977649-C-G 7109608-C-G **
7061087-G-T 7193046-G-T **
7114382-G-T 7246341-G-T **
7115380-G-T 7247339-G-T **
7202170-A-T 7334129-A-T **
7214368-C-A 7346327-C-A **
7239554-C-A 7371513-C-A **
7277598-C-A 7409557-C-A **
7295893-T-C 7427852-T-C **
7301577-C-A 7433536-C-A **
7301675-C-T 7433634-C-T **
7303198-T-A 7435157-T-A **
7360533-A-G 7492492-A-G **
7379610-C-A 7511569-C-A 11×T**
7898617-T-C 8030576-T-C **
8159493-T-G 8291452-T-G **
8167838-A-G 8299797-A-G **
8379660-T-G 8511619-T-G **
8849856-T-C 8981815-T-C **
9025083-G-T 9187474-G-T **
9382368-G-A 9544759-G-A **
9402614-G-C 9565005-G-C **
9908617-A-T 10071008-A-T **
9908725-C-A 10071116-C-A **
9932687-T-A 10095078-T-A **
9944293-G-T 10106684-G-T **
9965083-C-A 10127474-C-A **
9977098-C-A 10139489-C-A **
10002308-C-A 10164699-C-A **
10028249-A-C 10190640-A-C **
10040858-G-A 10203249-G-A **
10632659-C-A **
10673420-TC-T **
10693357-A-C **
10693475-G-A **
10748149-T-C **
10756291-GCATTC-G **
10762971-C-T **
10767911-C-A **
10790262-T-C **
10801809-T-C **
10821913-A-G **
10824083-A-T **
10824258-T-C **
10845607-A-T **
10860453-C-A **
10878008-TC-T **
10928966-T-A **
10929462-C-A **
10961312-A-T **
10964397-C-A **
10967306-T-A **
10978430-A-T **
10995155-C-A **
11014856-C-A **
11031426-C-T **
13217063-C-A 11061387-C-A **
13222505-A-G 11066829-A-G **
13326166-G-T 11170490-G-T **
13385860-T-A 11230184-T-A **
13394864-C-T 11239188-C-T **
13485719-C-G 11330043-C-G **
13485723-T-G 11330047-T-G **
13485732-A-C 11330056-A-C **
13485736-CAG-C 11330060-CAG-C **
13488967-G-T 11333291-G-T **
13634468-C-A 11478792-C-A **
13637803-T-C 11482127-T-C **
13637831-C-A 11482155-C-A **
13637848-T-C 11482172-T-C **
13637862-A-T 11482186-A-T **
13637886-C-A 11482210-C-A **
13637918-T-C 11482242-T-C **
13637937-A-C 11482261-A-C **
13640650-C-A 11484974-C-A **
11647893-A-T **
11660069-A-G **
11673356-G-C **
13809208-AGAATG-A 11688502-AGAATG-A 4×GAATG**
13854730-C-A 11734024-C-A **
13871302-T-A 11750596-T-A **
13885379-A-G 11764673-A-G **
13885884-A-C 11765178-A-C **
13891778-C-A 11771072-C-A **
13941130-C-T 11820424-C-T **
13963270-C-A 11842564-C-A **
14046543-A-T 11925837-A-T **
14067281-G-T 11946575-G-T **
14080012-C-A 11959306-C-A **
14128410-C-A 12007704-C-A **
14303048-A-G 12182342-A-G **
14430352-C-A 12309625-C-A **
14445624-C-A 12324897-C-A **
14485738-C-A 12365007-C-A **
14506007-C-A 12394212-C-A **
14520818-C-A 12409019-C-A **
14521636-G-A 12409837-G-A **
14570753-A-G 12458953-A-G **
14592260-A-G 12480460-A-G **
14639099-C-A 12527168-C-A **
14714782-T-C 12602849-T-C **
14768447-C-T 12656516-C-T **
15070366-G-A 12958457-G-A **
15070369-C-T 12958460-C-T **
15070370-C-A 12958461-C-A **
15070371-T-C 12958462-T-C **
15103767-C-A 12991855-C-A **
15140842-C-A 13028929-C-A **
15157582-G-A 13045669-G-A **
15170868-G-A 13058954-G-A **
15179266-TA-T 13067352-TA-T **
15429491-C-A 13317611-C-A **
15619413-A-T 13507533-A-T **
15629237-CA-C 13517357-CA-C **
15630792-T-C 13518912-T-C **
15671150-CG-C 13559270-CG-C **
15712374-G-C 13600494-G-C **
15733827-C-A 13621947-C-A **
15823627-C-A 13711747-C-A **
16020800-A-G 13908920-A-G **
16048978-A-G 13937098-A-G **
16245747-C-A 14133867-C-A **
16405351-C-A 14293471-C-A **
16421186-C-A 14309306-C-A **
16422501-C-T 14310621-C-T **
16429057-A-C 14317177-A-C **
16489938-T-C 14378058-T-C **
16503485-G-T 14391605-G-T **
16706578-G-T 14594698-G-T **
16710283-G-T 14598403-G-T **
16721588-T-C 14609708-T-C **
16729343-C-A 14617463-C-A **
17023454-T-C 14911574-T-C **
17042933-T-C 14931053-T-C **
17127239-C-T 15015359-C-T **
17127242-C-T 15015362-C-T **
17260386-A-G 15148506-A-G **
17372111-G-A 15260231-G-A FT377989 **
17372126-C-A 15260246-C-A **
17374472-G-A 15262592-G-A **
17514004-G-T 15402124-G-T **
17538059-C-A 15426179-C-A **
17551964-G-C 15440084-G-C **
17580877-C-A 15468997-C-A **
17581730-C-A 15469850-C-A **
17638423-G-C 15526543-G-C **
17638429-T-C 15526549-T-C **
17638430-A-G 15526550-A-G **
17638431-A-G 15526551-A-G **
17638453-T-G 15526573-T-G **
17638457-A-G 15526577-A-G **
17716717-A-G 15604837-A-G **
17774946-G-C 15663066-G-C **
17826656-C-A 15714776-C-A **
17860834-G-T 15748954-G-T **
17883766-G-A 15771886-G-A **
17932185-G-T 15820305-G-T **
18190451-G-A 16078571-G-A **
18194311-C-T 16082431-C-T **
18361581-A-AG 16249701-A-AG P6_Prx **
18565023-C-A 16453143-C-A **
18630651-T-A 16518771-T-A **
18702536-G-T 16590656-G-T **
18749514-C-A 16637634-C-A **
18867360-T-C 16755480-T-C **
18948136-A-G 16836256-A-G **
19012503-G-A 16900623-G-A **
19031166-G-A 16919286-G-A **
19088442-G-A 16976562-G-A **
19126462-T-AAAAAA 17014582-T-AAAAAA **
19286289-A-C 17174409-A-C **
19464156-C-T 17352276-C-T **
19551765-A-T 17439885-A-T **
19551772-G-A 17439892-G-A **
19551777-T-C 17439897-T-C **
19562462-C-A 17450582-C-A **
19829480-A-G 17717600-A-G P5_Prx **
19982555-T-C 17870675-T-C P5_Prx **
20560287-A-T 18398401-A-T P5_Dst **
20825226-T-C 18663340-T-C P4_Gap **
21111853-C-A 18949967-C-A **
21187896-G-A 19026010-G-A **
21196675-T-C 19034789-T-C **
21285479-G-T 19123593-G-T **
21462652-C-A 19300766-C-A **
21544084-A-G 19382198-A-G **
21597830-G-C 19435944-G-C **
21672110-C-A 19510224-C-A **
21861471-A-G 19699585-A-G **
21996368-C-T 19834482-C-T **
22055328-C-A 19893442-C-A **
22193037-C-A 20031151-C-A **
22506386-A-C 20344500-A-C DYZ19 **
22517232-C-A 20355346-C-A **
22760755-G-A 20598869-G-A **
22765750-C-A 20603864-C-A **
23004765-T-C 20842879-T-C **
23066754-C-A 20904868-C-A **
23092889-G-C 20931003-G-C **
23176867-T-A 21014981-T-A **
23198368-A-T 21036482-A-T **
23623257-G-T 21461371-G-T **
23807576-CTCA-C 21645690-CTCA-C **
23825767-A-T 21663881-A-T **
21783902-G-C **
24080108-T-A 21933961-T-A P3_b1 **
24205581-C-A 22059434-C-A P3_b1 **
24416920-A-T 22270773-A-T **
24466086-G-T 22319939-G-T **
24575877-T-TG 22429730-T-TG P3_t2 **
27815543-T-A 25669396-T-A P1_Y2 **
28462206-A-T 26316059-A-T **
28581967-A-T 26435820-A-T **
28583198-C-G 26437051-C-G **
28636227-T-C 26490080-T-C **
28648410-G-T 26502263-G-T **
28707829-T-C 26561682-T-C **
28747677-C-A 26601530-C-A **
28747699-AGCTT-A 26601552-AGCTT-A **
28747767-C-A 26601620-C-A **
28756939-C-A 26610792-C-A **
28772968-G-A 26626821-G-A FT461470 **
28781431-A-G 26635284-A-G **
56830021-C-G **
10679716-N-A **
3451451-G-A 3583410-G-A **
4502767-C-T 4634726-C-T **
9507772-A-AC 9670163-A-AC **
18353713-T-C 16241833-T-C P6_Prx **
19677974-T-G 17566094-T-G P5_Prx **
19772308-C-A 17660428-C-A P5_Prx **
19960960-G-T 17849080-G-T P5_Prx **
20347836-TTGTG-T 18185950-TTGTG-T P5_Dst 10×TG**
20943446-A-G 18781560-A-G P4_Dst **
22766328-T-C 20604442-T-C **
25615455-A-T 23469308-A-T P1_gr1 **
25998729-T-C 23852582-T-C P1_Y1 **
19899620-A-AGAAG 17787740-A-AGAAG P5_Prx 14×GAAG***
13704632-G-T 11548956-G-T ***
58973138-C-G 56826991-C-G ***
10012224-CT-C 10174615-CT-C ***
13691277-A-T 11535601-A-T ***
13691283-A-G 11535607-A-G 4×GAATG***
15324347-A-T 13212465-A-T ***
59004628-G-A 56858481-G-A ***
25998834-AAG-A 23852687-AAG-A P1_Y1 8×AG***
58820795-C-CCATTCCATTCGATTG 56770048-T-TTCGAATGGAATGCAA ***
2845849-AG-A 2977808-AG-A ***
7867871-A-G 7999830-A-G ***
7867872-A-G 7999831-A-G BY209284 ***
9296364-T-C 9458755-T-C ***
9836888-G-T 9999279-G-T BY186918 20×T***
13404804-T-C 11249128-T-C ***
13422430-ATG-A 11266754-ATG-A ***
13447579-CATTGT-C,CATTGC 11291903-CATTGT-C,CATTGC ***
13451866-C-CCCATTCCATT 11296190-C-CCCATTCCATT ***
13453429-C-T 11297753-C-T ***
13459181-C-T 11303505-C-T ***
13472511-T-G 11316835-T-G ***
13648936-CTGAAATGGAA-C 11493260-CTGAAATGGAA-C ***
13652130-G-GTGGAATGGAA 11496454-G-GTGGAATGGAA 11×TGGAA***
13662092-A-AT 11506416-A-AT ***
13662093-T-G 11506417-T-G ***
13664768-T-A 11509092-T-A ***
13684783-AATATC-A 11529107-AATATC-A ***
13687043-A-AAGTCG 11531367-A-AAGTCG ***
13687045-G-A 11531369-G-A ***
13687048-G-T 11531372-G-T ***
13699393-A-T 11543717-A-T ***
13699394-T-C 11543718-T-C ***
13701318-C-G 11545642-C-G ***
13734545-A-G 11578869-A-G ***
13808735-GAATGC-G 11688029-GAATGC-G ***
13825297-A-G 11704591-A-G ***
13854389-A-G 11733683-A-G ***
13855596-T-G 11734890-T-G ***
13862160-C-G 11741454-C-G ***
13869405-G-A 11748699-G-A ***
13869406-A-C 11748700-A-C ***
13962042-C-T 11841336-C-T 28×T***
14031696-C-CTT 11910990-C-CTT 13×TCTT***
14062044-AT-A 11941338-AT-A ***
14772698-G-T 12660767-G-T ***
16107440-C-T 13995560-C-T P8_Prx ***
16107441-A-T 13995561-A-T P8_Prx ***
16107442-G-GTT,T 13995562-G-GTT,T P8_Prx 30×T***
16115517-G-A 14003637-G-A P8_Prx ***
19586694-TA-T 17474814-TA-T P5_Prx ***
19668782-T-A 17556902-T-A P5_Prx 33×A***
20045272-A-G 17933392-A-G P5_Prx ***
20045273-G-A 17933393-G-A P5_Prx ***
20045274-A-AAG 17933394-A-AAG P5_Prx 14×AAAG***
20084491-TTTCC-T 17972611-TTTCC-T P5_Dst ***
20084499-C-T 17972619-C-T P5_Dst 31×T***
20689815-AT-A 18527929-AT-A P4_Prx 23×T***
22251326-G-T 20089440-G-T DYZ19 ***
22285529-A-G 20123643-A-G DYZ19 ***
22438355-A-G 20276469-A-G DYZ19 ***
22504956-T-A 20343070-T-A DYZ19 ***
22505011-A-T 20343125-A-T DYZ19 ***
23194844-G-A 21032958-G-A ***
23747203-TGC-T 21585317-TGC-T ***
23900658-G-A 21738772-G-A YSC0001228 ***
24600440-T-C 22454293-T-C Z45622 P3_t2 ***
24643274-G-T 22497127-G-T P3_t2 ***
25462345-GACACACACAC-G 23316198-GACACACACAC-G P2_r2 22×AC***
26117892-C-A 23971745-C-A P1_Y1 ***
26262185-C-CT 24116038-C-CT P1_Y1 21×T***
27791923-T-G 25645776-T-G P1_Y2 ***
28808482-G-A 26662335-G-A ***
28808507-G-A 26662360-G-A ***
28808617-G-GTGGAA 26662470-G-GTGGAA 5×TGGAA***
28808875-T-A 26662728-T-A BY27891 ***
58819367-C-A 56771504-G-T ***
58908906-A-ACTAGG 56681964-A-ACCTAG ***
58908909-C-T 56681962-G-A ***
58908910-C-G 56681961-G-C ***
58973921-CATTCG-C 56827774-CATTCG-C ***
58973928-G-T 56827781-G-T ***
58973933-T-G 56827786-T-G ***
58974003-T-G 56827856-T-G ***
58979405-T-TTCCAC 56833258-T-TTCCAC ***
27338161-GA-G 25192014-GA-G P1_g3 14×A***
25628439-CT-C 23482292-CT-C P1_b3 26×T***
28536045-TAC-T 26389898-TAC-T ***
2803666-C-T 2935625-C-T ***
9675325-TTA-T 9837716-TTA-T IR3_Prx ***
15542656-T-A 13430776-T-A ***
13487749-C-T 11332073-C-T ***
13484478-G-A 11328802-G-A BY210387 ***
17170189-G-T 15058309-G-T ***
13489621-C-A,T 11333945-C-A,T ***
13869404-C-CGAAAG,CGAATG 11748698-C-CGAAAG,CGAATG 9×GAATG***
6346345-C-CAT 6478304-C-CAT 10×AT***
9524368-C-A 9686759-C-A ***
19075480-C-A 16963600-C-A ***
10807252-C-G ***
56830055-C-CTCCACTCCAT ***
7033240-CA-C,CAA 7165199-CA-C,CAA 15×A***
10934834-A-T ***
19337674-G-T 17225794-G-T ***
13489774-C-A 11334098-C-A ***
21839968-A-T 19678082-A-T FTB19547 12×T***
7018058-G-A 7150017-G-A ***
13446531-ATTCCATTCCATTC-A,ATTCCATTTCATTC 11290855-ATTCCATTCCATTC-A,ATTCCATTTCATTC ***
15565514-C-A 13453634-C-A ***
13484458-T-A 11328782-T-A ***
11643681-A-C ***
10687561-T-TTTCCA ***
10807289-C-T ***
16781462-C-A 14669582-C-A ***
13448203-T-TACATC 11292527-T-TACATC ***
14315408-ATT-A,AT 12194702-ATT-A,AT 16×T***
21220270-C-T 19058384-C-T ***
18966024-T-A 16854144-T-A ***
10666965-G-T ***
13483328-C-G,T 11327652-C-G,T ***
10776046-A-C ***
15859437-CTTTT-C,CTT 13747557-CTTTT-C,CTT 17×T***
10667030-A-G ***
17361040-C-A 15249160-C-A ***
13473930-G-A 11318254-G-A BY210335 ***
20326036-TGCA-T,TT 18164150-TGCA-T,TT P5_Dst ***
13446583-T-C 11290907-T-C ***
13446592-T-TTCCAC 11290916-T-TTCCAC ***
56858375-AG-A,AGAAAGAAAGAAAG ***
15658215-G-GTA 13546335-G-GTA ***
19472510-G-T 17360630-G-T ***
8533407-CTT-C,CT 8665366-CTT-C,CT 14×T***
16819015-C-A 14707135-C-A ***
2791460-G-T 2923419-G-T ***
16095170-G-T 13983290-G-T ***
21146261-G-T 18984375-G-T ***
10694040-C-A ***
9117069-C-A 9279460-C-A ***
3986232-T-TA 4118191-T-TA 8×A***
7088378-C-A 7220337-C-A Y83337 ***
8008780-C-A 8140739-C-A ***
8095558-A-T 8227517-A-T ***
10668282-C-A ***
13484467-C-G 11328791-C-G ***
11665885-GA-G ***
14366624-C-A 12245919-C-A ***
15658231-G-A 13546351-G-A ***
16275896-G-C 14164016-G-C ***
16430228-C-A 14318348-C-A ***
16467415-T-C 14355535-T-C ***
18397923-T-A 16286043-T-A P6_Gap ***
18959295-G-A 16847415-G-A ***
19187409-TTTTTGCAC-T,TTTTTGTCT 17075529-TTTTTGCAC-T,TTTTTGTCT ***
22023201-CTTTTT-C,CTT 19861315-CTTTTT-C,CTT 20×T***
23522417-A-G 21360531-A-G ***
27030358-G-A 24884211-G-A P1_r4 ***
56830054-A-G ***
11014442-C-A ***
56829392-TTCCATTCGATTCCAT-T,TTCCATTCGATTGCAG ***
4878246-CAAA-C 5010205-CAAA-C 18×A***
3127252-G-A 3259211-G-A ***
7338358-C-T 7470317-C-T ***
22974197-G-C 20812311-G-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.