Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > ZZ19 > Z31644 > Z42772 > 7032532-C-T

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
277935
FGC-BigY
JGJ3G
24441332-T-C 22295185-T-C FGC18064 Y++
16213209-C-T 14101329-C-T FGC18054 YY++
14799364-G-A 12687435-G-A FGC18051 YY8×T++
14417692-G-T 12296989-G-T FGC18050 YY++
16452394-G-A 14340514-G-A FGC18055 YY++
16476941-C-A 14365061-C-A FGC18043 SK1433 YY++
16632447-T-C 14520567-T-C FGC18056 YY++
18418859-C-A 16306979-C-A FGC18059 P6_Gap ++
8314632-C-A 8446591-C-A FGC18049 YY++
20826571-C-A 18664685-C-A A15470 P4_Gap +***
7421894-AC-A 7553853-AC-A +**
6817528-C-T 6949487-C-T FGC18046 YY++
21172166-A-T 19010280-A-T YY+***
2893005-C-T 3024964-C-T FGC18045 YY++
2715019-G-A 2846978-G-A FGC18044 YY++
21482580-T-C 19320694-T-C FGC18060 YY++
15275363-G-A 13163452-G-A FGC18053 YY++
23195361-T-C 21033475-T-C Y+**
24368838-A-G 22222691-A-G FGC18063 ++
6635985-C-CA 6767944-C-CA +**
23493708-G-T 21331822-G-T FGC18062 YY+*
23299259-G-A 21137373-G-A FGC18061 YY++
23006929-GT-G 20845043-GT-G **+
7336731-A-ATAGT 7468690-A-ATAGT ****
14512049-A-G 12400254-A-G **
10093893-CT-C 10256284-CT-C *****
14879536-CTGTGTGTGTG-C 12767606-CTGTGTGTGTG-C 16×TG*****
3246416-C-A 3378375-C-A **
10083224-C-A 10245615-C-A **
19461307-C-A 17349427-C-A **
17637037-A-AT 15525157-A-AT **
15141285-A-T 13029372-A-T **
17372608-C-A 15260728-C-A **
23376847-C-A 21214961-C-A **
23438296-C-T 21276410-C-T A15474 **
13442203-T-G 11286527-T-G **
19537776-A-G 17425896-A-G **
15600010-C-A 13488130-C-A **
14100379-C-T 11979673-C-T **
23837986-G-T 21676100-G-T **
7123448-C-A 7255407-C-A **
17214303-C-A 15102423-C-A **
17211670-C-A 15099790-C-A **
7968287-G-T 8100246-G-T **
9424570-C-A 9586961-C-A **
9462731-G-T 9625122-G-T **
7413018-C-A 7544977-C-A **
18156734-A-G 16044854-A-G **
18410436-G-T 16298556-G-T P6_Gap **
7297400-G-T 7429359-G-T **
9776132-C-A 9938523-C-A **
18577190-G-T 16465310-G-T **
16246083-G-T 14134203-G-T **
18688397-A-G 16576517-A-G A15467 **
13442205-A-G 11286529-A-G **
7062675-T-G 7194634-T-G A15461 **
7042795-C-A 7174754-C-A **
7016383-G-T 7148342-G-T **
7016297-G-T 7148256-G-T **
6957834-C-A 7089793-C-A **
9957867-G-T 10120258-G-T **
16062902-C-A 13951022-C-A **
6854399-C-A 6986358-C-A **
10023730-C-G 10186121-C-G **
15756671-G-C 13644791-G-C **
15733915-C-A 13622035-C-A Y94600 **
15714247-C-T 13602367-C-T **
19354217-C-A 17242337-C-A **
7239793-G-A 7371752-G-A Y29460 **
22640477-G-T 20478591-G-T **
22435751-T-C 20273865-T-C DYZ19 **
13809424-G-A 11688718-G-A K15 **
13442211-T-C 11286535-T-C **
13596597-C-A 11440921-C-A **
20840756-C-A 18678870-C-A P4_Gap **
14478143-C-A 12357412-C-A **
13631232-C-A 11475556-C-A **
14573993-A-T 12462193-A-T **
15740425-C-A 13628545-C-A **
21550187-T-C 19388301-T-C **
21996169-C-T 19834283-C-T PR6993 **
21125739-G-A 18963853-G-A **
22259304-A-C 20097418-A-C DYZ19 *****
21048240-A-G 18886354-A-G **
21283409-C-T 19121523-C-T **
14075723-A-G 11955017-A-G **
14041699-C-A 11920993-C-A **
22055516-C-A 19893630-C-A **
25385483-C-A 23239336-C-A P2_r2 ***
25280450-T-C 23134303-T-C P2_r1 ***
25490004-G-T 23343857-G-T P2_r2 ***
25288450-T-A 23142303-T-A P2_r1 ***
27001812-G-C 24855665-G-C P1_r4 ***
26995228-G-T 24849081-G-T P1_r4 ***
25493269-G-T 23347122-G-T P2_r2 ***
26995220-C-A 24849073-C-A P1_r4 ***
25374542-G-T 23228395-G-T P2_r2 ***
25466467-T-A 23320320-T-A P2_r2 ***
25379636-T-G 23233489-T-G P2_r2 ***
26990538-C-A 24844391-C-A P1_r4 ***
25273862-A-T 23127715-A-T P2_r1 ***
25493271-G-T 23347124-G-T P2_r2 ***
25273831-A-C 23127684-A-C P2_r1 ***
25231954-T-G 23085807-T-G P2_r1 ***
25468825-A-G 23322678-A-G P2_r2 ***
25461178-C-A 23315031-C-A P2_r2 ***
25422148-G-T 23276001-G-T P2_r2 ***
25498288-C-A 23352141-C-A P2_r2 ***
27033033-C-T 24886886-C-T P1_r4 ***
25432609-C-T 23286462-C-T P2_r2 ***
27033030-C-T 24886883-C-T P1_r4 ***
25435215-C-A 23289068-C-A P2_r2 ***
25435250-G-A 23289103-G-A P2_r2 ***
25445188-C-T 23299041-C-T P2_r2 ***
25454096-C-A 23307949-C-A P2_r2 ***
25459451-C-A 23313304-C-A P2_r2 ***
25373132-G-T 23226985-G-T P2_r2 ***
25455458-A-C 23309311-A-C P2_r2 ***
27016207-A-G 24870060-A-G P1_r4 ***
25372081-A-T 23225934-A-T P2_r2 ***
25365332-G-T 23219185-G-T P2_r2 ***
27033065-G-T 24886918-G-T P1_r4 ***
25457054-G-A 23310907-G-A P2_r2 ***
27016187-A-C 24870040-A-C P1_r4 ***
25504098-T-C 23357951-T-C P1_gr1 ***
26986503-G-T 24840356-G-T P1_r4 ***
26248001-T-A 24101854-T-A P1_Y1 ***
26747379-C-A 24601232-C-A P1_g2 ***
25845155-G-A 23699008-G-A P1_b3 ***
25845185-T-A 23699038-T-A P1_b3 ***
25845194-T-A 23699047-T-A P1_b3 ***
26715950-C-A 24569803-C-A P1_g2 ***
25851638-T-C 23705491-T-C P1_Y1 ***
25964719-C-T 23818572-C-T P1_Y1 ***
26089828-C-G 23943681-C-G P1_Y1 ***
26150486-C-A 24004339-C-A P1_Y1 ***
26248010-C-A 24101863-C-A P1_Y1 ***
25782307-T-G 23636160-T-G P1_b3 ***
26538295-C-T 24392148-C-T P1_g2 ***
26274815-A-C 24128668-A-C P1_Y1 ***
26277750-A-T 24131603-A-T P1_Y1 ***
26277753-G-T 24131606-G-T P1_Y1 ***
26277760-G-T 24131613-G-T P1_Y1 ***
26538287-G-T 24392140-G-T A3581 P1_g2 ***
26392315-G-T 24246168-G-T P1_Y1 ***
26310873-A-C 24164726-A-C P1_Y1 ***
26284922-G-A 24138775-G-A P1_Y1 ***
25831995-A-T 23685848-A-T P1_b3 ***
25782263-T-A 23636116-T-A P1_b3 ***
26986494-T-G 24840347-T-G P1_r4 ***
26903608-A-G 24757461-A-G P1_r3 ***
25503360-C-A 23357213-C-A P1_gr1 ***
26986472-A-T 24840325-A-T P1_r4 ***
25524814-C-T 23378667-C-T P1_gr1 ***
25631175-A-G 23485028-A-G P1_b3 ***
25650421-G-T 23504274-G-T P1_b3 ***
25658043-A-G 23511896-A-G P1_b3 ***
25658054-A-T 23511907-A-T P1_b3 ***
25658294-G-T 23512147-G-T P1_b3 ***
25673739-T-C 23527592-T-C P1_b3 ***
25675881-C-A 23529734-C-A P1_b3 ***
26807243-C-A 24661096-C-A P1_g2 ***
25679165-A-T 23533018-A-T P1_b3 ***
25721693-G-T 23575546-G-T P1_b3 ***
26902230-T-A 24756083-T-A P1_r3 ***
25758096-T-A 23611949-T-A P1_b3 ***
26902216-G-A 24756069-G-A P1_r3 ***
25764061-A-G 23617914-A-G P1_b3 ***
25766665-C-T 23620518-C-T P1_b3 ***
26880227-A-T 24734080-A-T P1_r3 ***
26874086-G-T 24727939-G-T P1_r3 ***
26874032-G-T 24727885-G-T P1_r3 ***
25227631-T-G 23081484-T-G P2_r1 ***
13711819-G-T 11556143-G-T ***
25175576-A-C 23029429-A-C g1 ***
22963519-C-A 20801633-C-A ***
22447612-A-C 20285726-A-C DYZ19 ***
22489786-A-T 20327900-A-T DYZ19 ***
22537068-A-C 20375182-A-C ***
22587219-T-G 20425333-T-G ***
22613322-C-A 20451436-C-A ***
22662443-T-G 20500557-T-G ***
22682575-G-A 20520689-G-A ***
22739654-C-A 20577768-C-A ***
22849639-G-C 20687753-G-C ***
22876456-T-C 20714570-T-C ***
22963501-C-A 20801615-C-A ***
22964992-C-A 20803106-C-A ***
22345695-T-G 20183809-T-G DYZ19 ***
22997074-C-A 20835188-C-A ***
23004773-G-A 20842887-G-A ***
23076290-C-T 20914404-C-T ***
23262525-C-T 21100639-C-T FGC27861 ***
23262527-C-T 21100641-C-T ***
23262536-C-T 21100650-C-T ***
23425470-C-G 21263584-C-G ***
23425474-C-T 21263588-C-T ***
23425481-T-G 21263595-T-G ***
23495716-G-T 21333830-G-T ***
23554005-A-C 21392119-A-C ***
22367782-T-C 20205896-T-C DYZ19 ***
22345687-C-T 20183801-C-T DYZ19 ***
23745227-C-A 21583341-C-A ***
21939638-A-G 19777752-A-G ***
21141472-T-C 18979586-T-C ***
21197845-G-T 19035959-G-T ***
21316767-C-A 19154881-C-A ***
21328762-T-C 19166876-T-C ***
21334041-A-G 19172155-A-G ***
21369411-C-A 19207525-C-A ***
21604083-C-A 19442197-C-A ***
21617656-T-A 19455770-T-A ***
21668205-A-C 19506319-A-C ***
21668208-C-A 19506322-C-A ***
21791170-T-C 19629284-T-C ***
21939646-A-G 19777760-A-G ***
22338504-T-G 20176618-T-G DYZ19 ***
22027612-C-A 19865726-C-A ***
22147445-G-T 19985559-G-T ***
22166609-A-T 20004723-A-T ***
22224839-T-A 20062953-T-A DYZ19 ***
22224840-T-G 20062954-T-G DYZ19 ***
22289323-T-C 20127437-T-C DYZ19 ***
22334775-A-T 20172889-A-T DYZ19 ***
22335615-A-C 20173729-A-C DYZ19 ***
22338486-T-G 20176600-T-G DYZ19 ***
22338492-T-G 20176606-T-G DYZ19 ***
22338499-T-G 20176613-T-G DYZ19 ***
23729074-G-T 21567188-G-T ***
23818230-G-T 21656344-G-T ***
25173601-C-A 23027454-C-A g1 ***
24797783-A-G 22651636-A-G P3_b2 ***
27033069-A-T 24886922-A-T P1_r4 ***
24710212-T-G 22564065-T-G P3_b2 ***
24741880-G-T 22595733-G-T P3_b2 ***
24742571-A-G 22596424-A-G P3_b2 ***
24742857-A-G 22596710-A-G P3_b2 ***
24752406-G-T 22606259-G-T P3_b2 ***
24759747-C-A 22613600-C-A P3_b2 ***
24774490-T-C 22628343-T-C P3_b2 ***
24779596-G-T 22633449-G-T P3_b2 ***
24780306-T-A 22634159-T-A P3_b2 ***
24784397-G-A 22638250-G-A P3_b2 ***
24801141-T-A 22654994-T-A P3_b2 ***
24709424-T-C 22563277-T-C P3_b2 ***
24802928-G-T 22656781-G-T P3_b2 ***
24845315-T-C 22699168-T-C P3_b2 ***
24857651-C-A 22711504-C-A P3_b2 ***
24859409-G-T 22713262-G-T P3_b2 ***
24866954-A-C 22720807-A-C P3_b2 ***
24872729-C-A 22726582-C-A P3_b2 ***
24884229-G-T 22738082-G-T g1 ***
24939250-A-C 22793103-A-C g1 ***
25040371-G-T 22894224-G-T g1 ***
25049769-C-A 22903622-C-A g1 ***
25158224-T-A 23012077-T-A g1 ***
24710200-C-T 22564053-C-T P3_b2 ***
24683889-G-T 22537742-G-T P3_b2 ***
23880267-C-A 21718381-C-A ***
24378563-C-A 22232416-C-A ***
23953014-C-A 21806867-C-A ***
24024655-C-T 21878508-C-T ***
24027354-T-A 21881207-T-A ***
24027384-T-A 21881237-T-A ***
24028868-G-T 21882721-G-T ***
24034593-T-C 21888446-T-C ***
24039144-C-A 21892997-C-A ***
24047405-T-A 21901258-T-A ***
24118172-C-A 21972025-C-A P3_b1 ***
24261517-G-T 22115370-G-T P3_b1 ***
24272113-G-T 22125966-G-T P3_b1 ***
24383403-A-T 22237256-A-T ***
24670131-A-T 22523984-A-T P3_b2 ***
24550252-G-T 22404105-G-T P3_t2 ***
24561285-A-G 22415138-A-G P3_t2 ***
24575909-A-C 22429762-A-C P3_t2 ***
24577904-G-A 22431757-G-A P3_t2 ***
24641761-C-A 22495614-C-A P3_t2 ***
24643220-A-T 22497073-A-T P3_t2 ***
24643223-C-T 22497076-C-T P3_t2 ***
24649398-G-T 22503251-G-T P3_b2 ***
24649732-C-A 22503585-C-A P3_b2 ***
24654280-G-T 22508133-G-T P3_b2 ***
24655973-T-G 22509826-T-G P3_b2 ***
24658506-T-G 22512359-T-G P3_b2 ***
24710201-C-A 22564054-C-A P3_b2 ***
27375490-A-G 25229343-A-G P1_g3 ***
27056800-A-C 24910653-A-C P1_r4 ***
14496296-TG-GA 12384493-TG-GA ***
13803371-AGGAG-TGGAA 11682665-AGGAG-TGGAA ***
13803396-TG-CA 11682690-TG-CA ***
13833405-TT-CA 11712699-TT-CA ***
13846625-ATA-GAG 11725919-ATA-GAG ***
13846688-TCA-ATG 11725982-TCA-ATG ***
13856949-GTCGA-ATCAC 11736243-GTCGA-ATCAC ***
13856966-CGAA-TGAATGGAT 11736260-CGAA-TGAATGGAT ***
13859935-GAATG-AAATA 11739229-GAATG-AAATA ***
13869605-AAATG-GAATT 11748899-AAATG-GAATT ***
14363164-ATTTTT-A 12242459-ATTTTT-A 16×T***
14488773-CAAAAAA-C 12368042-CAAAAAA-C 16×A***
15491941-GTATATATATA-G 13380061-GTATATATATA-G 19×TA***
13801503-ACAAA-GCCAT 11680797-ACAAA-GCCAT ***
16340147-GAAAAAAAAAAAAAAAA-G 14228267-GAAAAAAAAAAAAAAAA-G 22×A***
17186726-TAAAAAAA-T 15074846-TAAAAAAA-T 19×A***
18343628-CTG-TTT 16231748-CTG-TTT P6_Prx ***
18429196-CAA-C 16317316-CAA-C P6_Dst 17×A***
18892267-TTTTATTTTA-T 16780387-TTTTATTTTA-T ***
19050375-CTTTTTT-C 16938495-CTTTTTT-C 18×T***
19726191-T-TA 17614311-T-TA P5_Prx 12×A***
19743718-C-CA 17631838-C-CA P5_Prx 13×A***
20337720-AT-A 18175834-AT-A P5_Dst 9×T***
20347331-CT-C 18185445-CT-C P5_Dst 8×T***
20426757-CTTCT-C 18264871-CTTCT-C P5_Dst 5×TTCT***
13801611-GG-AA 11680905-GG-AA ***
13799090-CA-TG 11678384-CA-TG ***
21002137-TCTGTTAACAGAGTGTGGCTCTGACTTAAC-T 18840251-TCTGTTAACAGAGTGTGGCTCTGACTTAAC-T P4_Dst ***
10064370-TA-AG 10226761-TA-AG ***
9951145-CC-AT 10113536-CC-AT ***
9951152-GAGC-AAGT 10113543-GAGC-AAGT ***
9952543-TGGT-CGGG 10114934-TGGT-CGGG ***
9959175-GTCC-ATCT 10121566-GTCC-ATCT ***
9995932-AAGGTAAAACCCACTTC-A 10158323-AAGGTAAAACCCACTTC-A ***
10016069-CTT-TTC 10178460-CTT-TTC ***
10016081-AA-TC 10178472-AA-TC ***
10064299-GTCTA-TTCTG 10226690-GTCTA-TTCTG ***
10064315-TT-CC 10226706-TT-CC ***
10064326-CC-TT 10226717-CC-TT ***
10064359-GAAG-TAAT 10226750-GAAG-TAAT ***
13143673-GCAGG-ACAGT 10633159-GCAGG-ACAGT ***
13489630-CACCCA-AAACC 11333954-CACCCA-AAACC ***
13248612-TG-T 11092936-TG-T ***
13442203-TTA-GTG 11286527-TTA-GTG ***
13447098-ATTACTTTCT-GTTGCATTCC 11291422-ATTACTTTCT-GTTGCATTCC ***
13453414-TATTTCATG-CATTCCATC 11297738-TATTTCATG-CATTCCATC ***
13463768-GCCCG-TCCCC 11308092-GCCCG-TCCCC ***
13471960-CGCC-TGCT 11316284-CGCC-TGCT ***
13471969-CACTG-AACCA 11316293-CACTG-AACCA ***
13480608-AA-TG 11324932-AA-TG ***
13485714-TA-CC 11330038-TA-CC ***
13487815-AGGGC-TGGGT 11332139-AGGGC-TGGGT ***
13489025-CCTCT-ACTCC 11333349-CCTCT-ACTCC ***
13489619-ACCC-TCACT 11333943-ACCC-TCACT ***
20893454-CA-C 18731568-CA-C P4_Dst 10×A***
21013084-AT-A 18851198-AT-A P4_Dst 14×T***
9950938-AA-G 10113329-AA-G ***
58891021-CA-TT 56699849-TG-AA ***
27694735-GTA-TTT 25548588-GTA-TTT P1_Y2 ***
27733713-CAAAAAAAAAA-C 25587566-CAAAAAAAAAA-C P1_Y2 26×A***
27776111-GA-G 25629964-GA-G P1_Y2 9×A***
27896086-TAAAC-AAAAA 25749939-TAAAC-AAAAA P1_Y2 ***
27978560-AT-A 25832413-AT-A P1_Y2 14×T***
28132491-C-TT 25986344-C-TT P1_b4 ***
28245714-A-AT 26099567-A-AT P1_b4 15×T***
28395566-ATT-A 26249419-ATT-A P1_gr2 12×T***
28787990-ATGGAACAG-GTGC 26641843-ATGGAACAG-GTGC ***
58834886-A-AG 56755984-A-AC ***
58876789-GCATT-CCATG 56714078-AATGC-CATGG 4×CATTC***
58972139-GTT-TTG 56825992-GTT-TTG ***
27368714-GA-G 25222567-GA-G P1_g3 10×A***
58975760-TTCCG-CTCCA 56829613-TTCCG-CTCCA ***
58975914-TC-AT 56829767-TC-AT ***
58977556-TG-CTTTTCA 56831409-TG-CTTTTCA ***
58977659-CC-TG 56831512-CC-TG ***
58977670-GATGTCACT-TATCTCA 56831523-GATGTCACT-TATCTCA ***
58978681-GTCCAC-CTCCAA 56832534-GTCCAC-CTCCAA ***
58979225-TTCT-CTCC 56833078-TTCT-CTCC ***
58983619-GT-AG 56837472-GT-AG ***
58993348-GG-AC 56847201-GG-AC ***
59006817-G-GA 56860670-G-GA 9×A***
15491941-GTATATATA-G 13380061-GTATATATA-G 19×TA***
27375800-ATT-A 25229653-ATT-A P1_g3 19×T***
27173659-GA-G 25027512-GA-G P1_g3 13×A***
22113187-CAAAAAAAAAAA-C 19951301-CAAAAAAAAAAA-C 23×A***
24786151-CCATAATTACATTGCTGGAAGTTTATCTGTCCAAATT-C 22640004-CCATAATTACATTGCTGGAAGTTTATCTGTCCAAATT-C P3_b2 ***
22236277-AACT-GACA 20074391-AACT-GACA DYZ19 ***
22308470-ATGAG-A 20146584-ATGAG-A DYZ19 ***
22333461-GT-CA 20171575-GT-CA DYZ19 ***
22366194-TTCAAG-GTCAGT 20204308-TTCAAG-GTCAGT DYZ19 ***
22456981-CTGT-GTGG 20295095-CTGT-GTGG DYZ19 ***
23759112-CTAA-C 21597226-CTAA-C ***
24564625-GT-G 22418478-GT-G P3_t2 8×T***
24618868-CT-C 22472721-CT-C P3_t2 12×T***
24641782-CT-C 22495635-CT-C P3_t2 9×T***
24710200-CC-TA 22564053-CC-TA P3_b2 ***
24767014-TA-T 22620867-TA-T P3_b2 ***
24795367-AT-A 22649220-AT-A P3_b2 8×T***
27062987-TGTA-T 24916840-TGTA-T P1_r4 5×GTA***
24842143-GCAAAAATACATGCTTACTATA-G 22695996-GCAAAAATACATGCTTACTATA-G P3_b2 ***
25231945-TGGGA-GGGGG 23085798-TGGGA-GGGGG P2_r1 ***
25496134-GA-G 23349987-GA-G P2_r2 ***
25739592-TAC-T 23593445-TAC-T P1_b3 ***
25845158-GAAT-AAAA 23699011-GAAT-AAAA P1_b3 ***
25990667-ACT-CCC 23844520-ACT-CCC P1_Y1 ***
26873983-C-CT 24727836-C-CT P1_r3 23×T***
26991266-TAGT-AAGA 24845119-TAGT-AAGA P1_r4 ***
27016398-CT-C 24870251-CT-C P1_r4 ***
27033080-AATA-TATT 24886933-AATA-TATT P1_r4 ***
27033094-CC-TT 24886947-CC-TT P1_r4 ***
27062104-CTTGA-TTTGG 24915957-CTTGA-TTTGG P1_r4 ***
9950995-ATACA-GTACT 10113386-ATACA-GTACT ***
9934789-CG-TA 10097180-CG-TA ***
27062084-G-T 24915937-G-T P1_r4 ***
27828587-C-T 25682440-C-T P1_Y2 ***
27564818-A-C 25418671-A-C P1_Y2 ***
27576127-T-G 25429980-T-G P1_Y2 ***
27694768-A-T 25548621-A-T P1_Y2 ***
27775442-A-T 25629295-A-T P1_Y2 ***
27775456-C-T 25629309-C-T P1_Y2 ***
27776705-T-A 25630558-T-A P1_Y2 ***
27784578-G-T 25638431-G-T P1_Y2 ***
27792841-G-C 25646694-G-C P1_Y2 ***
27793165-C-A 25647018-C-A P1_Y2 ***
27800751-G-T 25654604-G-T P1_Y2 ***
27808514-G-T 25662367-G-T P1_Y2 ***
27844589-G-T 25698442-G-T P1_Y2 ***
27432994-A-G 25286847-A-G P1_g3 10×T***
27873376-A-G 25727229-A-G P1_Y2 ***
27895974-A-C 25749827-A-C P1_Y2 ***
27908783-T-A 25762636-T-A P1_Y2 ***
27915924-A-G 25769777-A-G P1_Y2 ***
27919724-T-C 25773577-T-C P1_Y2 ***
27993085-G-T 25846938-G-T P1_Y2 ***
28024822-T-A 25878675-T-A P1_Y2 ***
28033617-G-T 25887470-G-T P1_Y2 ***
28104002-A-C 25957855-A-C P1_Y2 ***
28114336-G-T 25968189-G-T P1_b4 ***
28132502-T-G 25986355-T-G P1_b4 ***
27546742-C-T 25400595-C-T P1_Y2 19×T***
27421410-G-T 25275263-G-T P1_g3 ***
28186037-A-G 26039890-A-G P1_b4 ***
27236017-G-T 25089870-G-T P1_g3 ***
27062144-A-C 24915997-A-C P1_r4 ***
27071117-A-T 24924970-A-T P1_r4 ***
27071137-A-C 24924990-A-C P1_r4 ***
27127109-A-G 24980962-A-G P1_g3 ***
27146979-C-T 25000832-C-T P1_g3 ***
27154717-G-T 25008570-G-T P1_g3 ***
27164280-C-A 25018133-C-A P1_g3 ***
27176117-G-T 25029970-G-T P1_g3 ***
27178971-T-G 25032824-T-G P1_g3 ***
27198837-G-T 25052690-G-T P1_g3 ***
27202787-A-G 25056640-A-G P1_g3 ***
27255867-T-C 25109720-T-C P1_g3 ***
27409325-T-C 25263178-T-C P1_g3 ***
27266278-G-T 25120131-G-T P1_g3 ***
27277955-A-G 25131808-A-G P1_g3 ***
27295238-A-T 25149091-A-T P1_g3 ***
27311835-C-T 25165688-C-T P1_g3 ***
27312984-C-A 25166837-C-A P1_g3 ***
27341282-C-A 25195135-C-A P1_g3 ***
27344001-G-T 25197854-G-T P1_g3 ***
27353279-G-T 25207132-G-T P1_g3 ***
27357237-A-G 25211090-A-G P1_g3 ***
27368705-T-C 25222558-T-C P1_g3 ***
27391398-G-T 25245251-G-T P1_g3 ***
27409220-G-T 25263073-G-T P1_g3 ***
28160885-A-T 26014738-A-T P1_b4 ***
28223619-T-A 26077472-T-A P1_b4 ***
9629231-TTG-T 9791622-TTG-T IR3_Prx ***
22297736-TGA-AGT 20135850-TGA-AGT DYZ19 ***
58993315-G-C 56847168-G-C ***
58993324-A-T 56847177-A-T ***
8555557-G-GTTTTTT 8687516-G-GTTTTTT ***
7717737-C-CTTCCTTCTTTCT 7849696-C-CTTCCTTCTTTCT 13×TTCT***
13489687-AT-GC 11334011-AT-GC ***
7250545-GGTGT-G 7382504-GGTGT-G 19×GT***
13468273-CCAT-TCGC 11312597-CCAT-TCGC ***
9942071-TG-T 10104462-TG-T ***
58976376-ATTA-CTTC 56830229-ATTA-CTTC ***
27248568-GT-G 25102421-GT-G P1_g3 18×T***
20439958-GT-G 18278072-GT-G P5_Dst 16×T***
20460428-AT-A 18298542-AT-A P5_Dst 17×T***
58979781-A-C 56833634-A-C ***
58980422-CTC-ATT 56834275-CTC-ATT ***
58977086-CG-AA 56830939-CG-AA ***
16136069-AT-A 14024189-AT-A P8_Dst 15×T***
2892542-ATTTTTT-A 3024501-ATTTTTT-A 18×T***
6133841-GA-G 6265800-GA-G ***
6346109-TATATA-GTCTT 6478068-TATATA-GTCTT ***
7081337-C-CT 7213296-C-CT ***
8216406-CTTTTTT-C 8348365-CTTTTTT-C 16×T***
8400900-CTTTTTT-C 8532859-CTTTTTT-C 14×T***
8555551-G-GTTTTTT 8687510-G-GTTTTTT ***
8575984-TG-T 8707943-TG-T ***
9030402-GG-AA 9192793-GG-AA ***
58983619-G-A 56837472-G-A ***
58977238-C-T 56831091-C-T ***
28245740-C-T 26099593-C-T P1_b4 ***
28673171-C-A 26527024-C-A ***
28253403-T-A 26107256-T-A P1_b4 ***
28253406-G-A 26107259-G-A P1_b4 ***
28253411-G-A 26107264-G-A P1_b4 ***
28253435-T-A 26107288-T-A P1_b4 ***
28441334-G-T 26295187-G-T P1_gr2 ***
28479814-A-T 26333667-A-T ***
28530821-G-A 26384674-G-A ***
28531407-C-T 26385260-C-T ***
28548616-G-T 26402469-G-T ***
28580355-C-A 26434208-C-A ***
28657959-G-T 26511812-G-T ***
28714878-C-A 26568731-C-A ***
58976091-A-T 56829944-A-T ***
28724366-C-A 26578219-C-A ***
28732092-A-G 26585945-A-G ***
28767894-C-A 26621747-C-A ***
28787979-A-C 26641832-A-C ***
28792265-C-A 26646118-C-A ***
28806145-G-A 26659998-G-A ***
58819710-T-A 56771161-A-T ***
58819740-T-C 56771131-A-G ***
58834752-G-C 56756119-C-G ***
58834871-T-A 56756000-A-T ***
58866136-T-A 56724735-A-T ***
58891030-C-G 56699841-G-C ***
21141471-G-A 18979585-G-A ***
20232359-A-T 18070473-A-T P5_Dst ***
21113048-G-T 18951162-G-T ***
9666208-A-G 9828599-A-G IR3_Prx ***
9311491-T-G 9473882-T-G ***
9311496-G-C 9473887-G-C ***
9313009-C-A 9475400-C-A ***
9345431-T-G 9507822-T-G ***
9373542-A-G 9535933-A-G ***
9462121-G-T 9624512-G-T ***
9529230-C-T 9691621-C-T IR3_Prx ***
9535184-T-G 9697575-T-G IR3_Prx ***
9624856-T-A 9787247-T-A IR3_Prx ***
9627024-A-G 9789415-A-G IR3_Prx ***
9670887-G-T 9833278-G-T IR3_Prx ***
9210871-A-T 9373262-A-T ***
9723710-G-T 9886101-G-T IR3_Prx ***
9731655-G-T 9894046-G-T IR3_Prx ***
9778841-G-A 9941232-G-A BY31668 FGC73051 ***
9919468-A-C 10081859-A-C ***
9934877-C-T 10097268-C-T ***
9934940-C-T 10097331-C-T ***
9934944-G-T 10097335-G-T ***
9945261-A-T 10107652-A-T ***
9945281-A-G 10107672-A-G ***
9950915-A-G 10113306-A-G ***
9952050-T-G 10114441-T-G ***
9212825-G-T 9375216-G-T ***
9194281-A-C 9356672-A-C ***
10009514-T-C 10171905-T-C ***
8160215-T-A 8292174-T-A ***
7381778-C-T 7513737-C-T ***
7426728-C-A 7558687-C-A ***
7428759-C-A 7560718-C-A ***
7500653-G-T 7632612-G-T IR1_L ***
7501239-A-G 7633198-A-G IR1_L ***
7524565-A-T 7656524-A-T ***
8022784-C-A 8154743-C-A ***
8057728-G-T 8189687-G-T ***
8079582-T-C 8211541-T-C ***
8138172-A-C 8270131-A-C ***
8163014-A-G 8294973-A-G ***
9173813-G-A 9336204-G-A ***
8279927-T-C 8411886-T-C ***
8279932-A-C 8411891-A-C ***
8387627-G-T 8519586-G-T ***
8635995-A-C 8767954-A-C ***
8637523-T-G 8769482-T-G ***
8661700-T-C 8793659-T-C ***
8661718-G-T 8793677-G-T ***
8856953-G-T 8988912-G-T ***
8902118-T-C 9034077-T-C ***
8902119-G-A 9034078-G-A Y88337 ***
9111613-G-T 9274004-G-T ***
9952163-C-T 10114554-C-T ***
10010377-C-A 10172768-C-A ***
7380402-G-T 7512361-G-T ***
13465305-A-C 11309629-A-C ***
13349544-A-G 11193868-A-G ***
13355593-C-A 11199917-C-A ***
13394966-C-A 11239290-C-A ***
13404449-C-A 11248773-C-A ***
13428727-A-C 11273051-A-C ***
13428740-A-T 11273064-A-T ***
13428747-G-A 11273071-G-A ***
13442825-C-T 11287149-C-T ***
13460993-G-A 11305317-G-A ***
13461000-G-A 11305324-G-A ***
13466451-A-T 11310775-A-T ***
13326719-G-A 11171043-G-A ***
13466466-C-A 11310790-C-A ***
13468285-T-A 11312609-T-A ***
13473794-C-G 11318118-C-G ***
13473820-G-C 11318144-G-C ***
13474403-A-C 11318727-A-C ***
13480055-C-A 11324379-C-A ***
13480153-A-T 11324477-A-T ***
13487809-T-A 11332133-T-A ***
13489675-G-C 11333999-G-C ***
13543767-A-C 11388091-A-C ***
13556775-C-A 11401099-C-A ***
13329241-G-T 11173565-G-T ***
13313513-G-A 11157837-G-A ***
10011779-C-A 10174170-C-A ***
10064315-T-C 10226706-T-C ***
10043117-A-G 10205508-A-G ***
10043130-A-G 10205521-A-G ***
10043772-T-C 10206163-T-C ***
10043908-G-T 10206299-G-T ***
10064221-T-C 10226612-T-C ***
10064259-T-C 10226650-T-C ***
10064265-G-A 10226656-G-A ***
10064274-G-A 10226665-G-A ***
10064276-T-G 10226667-T-G ***
10064299-G-T 10226690-G-T ***
10064303-A-G 10226694-A-G ***
10064316-T-C 10226707-T-C ***
13294210-T-C 11138534-T-C ***
10064326-C-T 10226717-C-T ***
10064353-T-C 10226744-T-C ***
10064390-T-A 10226781-T-A ***
10088723-T-C 10251114-T-C ***
10090541-A-G 10252932-A-G ***
10094038-A-C 10256429-A-C ***
10099462-T-A 10261853-T-A ***
10099648-G-A 10262039-G-A ***
13210684-A-C 11055008-A-C ***
13216725-T-G 11061049-T-G ***
13253154-C-A 11097478-C-A ***
7381751-C-T 7513710-C-T ***
7356199-C-A 7488158-C-A ***
13594175-C-A 11438499-C-A ***
24305930-C-T 22159783-C-T P3_t1 ******
20636483-A-G 18474597-A-G P4_Prx ***
22248895-G-A 20087009-G-A DYZ19 ***
22266875-G-T 20104989-G-T DYZ19 ***
22298725-G-A 20136839-G-A DYZ19 ***
22303414-G-C 20141528-G-C DYZ19 ***
22318212-G-C 20156326-G-C DYZ19 ***
22425021-C-T 20263135-C-T DYZ19 ***
22453515-G-T 20291629-G-T DYZ19 ***
22509252-G-A 20347366-G-A DYZ19 ******
23728120-C-T 21566234-C-T BZ4229 ***
24798908-C-G 22652761-C-G P3_b2 ******
19717572-C-A 17605692-C-A P5_Prx ***
25824774-A-G 23678627-A-G P1_b3 ***
25857628-T-C 23711481-T-C P1_Y1 ***
26241044-G-A 24094897-G-A P1_Y1 ***
9919477-G-A 10081868-G-A ***
13452048-TACG-CACT 11296372-TACG-CACT ***
58819738-C-A 56771133-G-T ***
13461693-A-G 11306017-A-G ***
24646542-C-A 22500395-C-A P3_b2 ***
7503949-C-T 7635908-C-T IR1_L ***
13371783-T-C 11216107-T-C ***
58819716-T-A 56771155-A-T ***
20616366-T-C 18454480-T-C P4_Prx ***
13853772-G-C 11733066-G-C ***
13428709-T-C 11273033-T-C ***
9952535-TGC-CGT 10114926-TGC-CGT ***
22325206-G-T 20163320-G-T DYZ19 ***
27982169-CATT-C 25836022-CATT-C P1_Y2 10×ATT***
28160822-CTTT-C 26014675-CTTT-C P1_b4 22×T***
22446727-A-C,G 20284841-A-C,G DYZ19 ***
27134027-AAAAG-A 24987880-AAAAG-A P1_g3 5×AAAG***
13835274-G-A,GGATCA 11714568-G-A,GGATCA ***
13846620-G-C 11725914-G-C ***
22502903-G-C 20341017-G-C DYZ19 ***
27033046-C-T 24886899-C-T P1_r4 ***
58993351-G-A 56847204-G-A ***
19763364-GA-G 17651484-GA-G P5_Prx 15×A***
13485613-AATG-GATT 11329937-AATG-GATT ***
13853712-G-C 11733006-G-C ***
13489820-TGGT-CGGC 11334144-TGGT-CGGC ***
13846570-CAG-TAA 11725864-CAG-TAA ***
24582352-CT-C 22436205-CT-C P3_t2 17×T***
24895715-GTTG-TTTT 22749568-GTTG-TTTT g1 ***
9741354-T-C 9903745-T-C FGC21432 IR3_Prx 16×AC***
6143360-T-C 6275319-T-C IR3_Dst ******
7459762-C-G 7591721-C-G IR1_L ***
13463262-G-A 11307586-G-A ***
13833227-G-A 11712521-G-A ***
13833228-A-AT,T 11712522-A-AT,T ***
13853703-G-A 11732997-G-A ***
13859745-G-C 11739039-G-C ***
13480144-A-G 11324468-A-G ***
7306836-G-T 7438795-G-T ***
7124646-G-A 7256605-G-A ***
6780776-C-G 6912735-C-G ***
6789345-G-T 6921304-G-T ***
6825385-G-T 6957344-G-T ***
6827880-C-A 6959839-C-A ***
6873325-C-A 7005284-C-A ***
6888511-A-C 7020470-A-C ***
6898773-C-A 7030732-C-A ***
6957597-T-C 7089556-T-C ***
6975877-C-A 7107836-C-A ***
7081282-G-T 7213241-G-T ***
7131335-T-G 7263294-T-G ***
6732662-C-T 6864621-C-T ***
7131855-C-A 7263814-C-A ***
7154635-A-C 7286594-A-C ***
7154647-A-C 7286606-A-C ***
7197609-T-C 7329568-T-C ***
7197611-G-A 7329570-G-A ***
7263623-T-C 7395582-T-C ***
7288093-T-C 7420052-T-C ***
7295826-C-A 7427785-C-A ***
7304570-C-G 7436529-C-G ***
7304579-C-T 7436538-C-T ***
7304580-A-G 7436539-A-G ***
6774925-C-A 6906884-C-A ***
6373597-T-C 6505556-T-C ***
22341704-G-T 20179818-G-T DYZ19 ***
3844363-C-A 3976322-C-A ***
21141450-T-C 18979564-T-C ***
2669016-G-T 2800975-G-T ***
2669021-G-T 2800980-G-T ***
2683465-C-A 2815424-C-A ***
2752675-G-A 2884634-G-A A15460 ***
2799619-G-T 2931578-G-T ***
2824484-C-A 2956443-C-A ***
3164730-C-T 3296689-C-T ***
3640222-A-G 3772181-A-G ***
3790741-A-G 3922700-A-G ***
3844268-C-A 3976227-C-A ***
4090309-T-C 4222268-T-C ***
6346110-A-C 6478069-A-C ***
4093474-C-A 4225433-C-A ***
4227309-A-G 4359268-A-G ***
4873616-C-A 5005575-C-A ***
4889287-G-A 5021246-G-A ***
4908344-C-A 5040303-C-A ***
5190016-A-T 5321975-A-T ***
5459066-T-C 5591025-T-C ***
5459068-C-A 5591027-C-A ***
5506019-A-T 5637978-A-T ***
5506029-G-T 5637988-G-T ***
6226330-G-T 6358289-G-T IR3_Dst ***
13556776-C-A 11401100-C-A ***
13598591-T-A 11442915-T-A ***
21092302-C-A 18930416-C-A ***
19256256-C-A 17144376-C-A ***
18928531-T-C 16816651-T-C ***
18989814-C-A 16877934-C-A ***
18996350-C-T 16884470-C-T ***
19053420-C-A 16941540-C-A ***
19081208-A-C 16969328-A-C ***
19129708-G-A 17017828-G-A ***
19132496-C-A 17020616-C-A ***
19189494-C-T 17077614-C-T ***
19189498-A-T 17077618-A-T Y38156 ***
19213529-T-A 17101649-T-A ***
19272099-T-G 17160219-T-G ***
18928523-G-A 16816643-G-A ***
19325638-G-A 17213758-G-A ***
19361170-C-A 17249290-C-A ***
19412506-A-C 17300626-A-C ***
19461289-T-A 17349409-T-A ***
19496120-C-A 17384240-C-A ***
19537971-T-A 17426091-T-A ***
19538308-C-A 17426428-C-A ***
19646923-C-A 17535043-C-A P5_Prx ***
19675762-T-C 17563882-T-C P5_Prx ***
19676103-A-C 17564223-A-C P5_Prx ***
19682109-T-A 17570229-T-A P5_Prx ***
18928527-T-C 16816647-T-C ***
18928509-T-A 16816629-T-A ***
19828539-C-A 17716659-C-A P5_Prx ***
18422725-T-C 16310845-T-C P6_Gap ***
18011094-G-A 15899214-G-A P7_Dst ***
18012063-T-A 15900183-T-A P7_Dst ***
18022450-C-A 15910570-C-A ***
18089717-C-A 15977837-C-A ***
18139173-C-A 16027293-C-A ***
18158644-C-A 16046764-C-A ***
18174525-G-C 16062645-G-C ***
18239064-C-A 16127184-C-A ***
18311952-C-A 16200072-C-A P6_Prx ***
18366019-A-G 16254139-A-G P6_Prx ***
18430091-T-A 16318211-T-A P6_Dst ***
18928490-A-G 16816610-A-G ***
18439551-C-G 16327671-C-G P6_Dst ***
18516743-T-C 16404863-T-C P6_Dst ***
18577028-T-C 16465148-T-C ***
18577166-G-A 16465286-G-A ***
18577185-A-G 16465305-A-G ***
18611762-T-G 16499882-T-G ***
18621607-C-A 16509727-C-A ***
18844029-C-A 16732149-C-A ***
18908114-A-G 16796234-A-G ***
18928479-A-C 16816599-A-C ***
18928489-G-T 16816609-G-T ***
19790341-C-A 17678461-C-A P5_Prx ***
19832107-A-G 17720227-A-G P5_Prx ***
17994825-G-A 15882945-G-A P7_Prx ***
20845485-T-A 18683599-T-A P4_Dst ***
20426692-G-T 18264806-G-T P5_Dst ***
20447408-T-G 18285522-T-G P5_Dst ***
20466591-G-A 18304705-G-A P5_Dst ***
20466602-G-A 18304716-G-A P5_Dst ***
20495560-A-G 18333674-A-G P5_Dst ***
20530230-A-G 18368344-A-G P5_Dst ***
20545288-T-A 18383402-T-A P5_Dst ***
20653983-C-G 18492097-C-G P4_Prx ***
20703664-A-C 18541778-A-C P4_Prx ***
20845148-C-A 18683262-C-A P4_Dst ***
20886715-G-A 18724829-G-A P4_Dst ***
20394491-G-A 18232605-G-A P5_Dst ***
20886733-T-A 18724847-T-A P4_Dst ***
20920233-G-A 18758347-G-A P4_Dst ***
20920238-C-A 18758352-C-A P4_Dst ***
20950569-G-A 18788683-G-A P4_Dst ***
20972159-C-A 18810273-C-A P4_Dst ***
20986393-T-A 18824507-T-A P4_Dst ***
21014133-C-A 18852247-C-A P4_Dst ***
21030592-G-A 18868706-G-A P4_Dst ***
21056200-A-G 18894314-A-G ***
21056203-T-G 18894317-T-G ***
21056221-A-G 18894335-A-G ***
20417765-G-A 18255879-G-A P5_Dst ***
20394468-A-T 18232582-A-T P5_Dst ***
19915204-G-T 17803324-G-T P5_Prx ***
20214410-A-T 18052524-A-T P5_Dst ***
19937285-C-A 17825405-C-A P5_Prx ***
19967698-T-C 17855818-T-C P5_Prx ***
20002743-G-T 17890863-G-T P5_Prx ***
20096000-A-G 17984120-A-G P5_Dst ***
20111156-G-T 17999276-G-T P5_Dst ***
20113000-C-T 18001120-C-T P5_Dst ***
20116006-G-T 18004126-G-T P5_Dst ***
20138672-A-G 18026792-A-G P5_Dst ***
20202928-C-A 18041042-C-A P5_Dst ***
20207163-T-A 18045277-T-A P5_Dst ***
20211871-C-G 18049985-C-G P5_Dst ***
20222814-T-A 18060928-T-A P5_Dst ***
20368383-C-A 18206497-C-A P5_Dst ***
20227775-T-C 18065889-T-C P5_Dst ***
20231313-A-G 18069427-A-G P5_Dst ***
13405145-T-C 11249469-T-C ***
20243591-T-A 18081705-T-A P5_Dst ***
20243593-A-T 18081707-A-T P5_Dst ***
20252751-T-A 18090865-T-A P5_Dst ***
20279112-G-T 18117226-G-T P5_Dst ***
20307838-A-C 18145952-A-C P5_Dst ***
20314445-A-G 18152559-A-G P5_Dst ***
20350449-T-C 18188563-T-C P5_Dst ***
20362277-T-G 18200391-T-G P5_Dst ***
18008720-C-T 15896840-C-T P7_Dst ***
17994811-G-A 15882931-G-A P7_Prx ***
13621221-C-A 11465545-C-A ***
14888222-C-T 12776288-C-T ***
14696397-C-A 12584463-C-A ***
14786304-C-A 12674374-C-A ***
14858937-G-A 12747003-G-A ***
14888178-C-A 12776244-C-A ***
14888179-A-G 12776245-A-G ***
14888196-T-C 12776262-T-C ***
14888198-T-C 12776264-T-C ***
14888202-A-T 12776268-A-T ***
14888219-G-A 12776285-G-A ***
14888221-G-A 12776287-G-A ***
14888223-C-G 12776289-C-G ***
14649692-C-A 12537757-C-A ***
14927233-G-A 12815298-G-A ***
14943549-C-A 12831623-C-A ***
14951435-G-T 12839509-G-T ***
14951437-T-C 12839511-T-C ***
15137876-C-A 13025963-C-A ***
15171368-C-A 13059454-C-A ***
15260754-C-A 13148838-C-A ***
15334422-A-T 13222540-A-T ***
15364027-T-C 13252147-T-C ***
15364642-C-A 13252762-C-A ***
15449975-A-C 13338095-A-C ***
14667736-A-C 12555801-A-C ***
14622102-G-T 12510300-G-T ***
15559063-C-T 13447183-C-T ***
14322845-C-A 12202139-C-A ***
13705605-C-G 11549929-C-G ***
13715669-C-A 11559993-C-A ***
13716695-T-G 11561019-T-G ***
13809868-C-T 11689162-C-T ***
13846573-T-A 11725867-T-A ***
13846598-T-A 11725892-T-A ***
13871479-C-A 11750773-C-A ***
14033931-C-A 11913225-C-A ***
14195325-C-A 12074619-C-A ***
14196014-G-T 12075308-G-T ***
14291763-C-A 12171057-C-A ***
14348059-C-A 12227354-C-A ***
14600029-A-G 12488229-A-G ***
14350180-C-T 12229475-C-T ***
14361440-C-A 12240735-C-A ***
14387669-T-G 12266965-T-G ***
14424940-T-C 12304215-T-C ***
14450503-C-A 12329776-C-A ***
14462529-C-A 12341802-C-A ***
14484780-G-T 12364049-G-T ***
14502725-T-C 12390930-T-C ***
14530381-C-A 12418582-C-A ***
14540663-C-T 12428864-C-T ***
14540665-G-A 12428866-G-A ***
15472035-A-C 13360155-A-C ***
15660335-C-A 13548455-C-A ***
17963625-G-T 15851745-G-T ***
17284698-G-T 15172818-G-T ***
16884879-T-A 14772999-T-A ***
16886412-A-C 14774532-A-C ***
16905727-C-A 14793847-C-A ***
16921453-A-G 14809573-A-G ***
16928784-G-T 14816904-G-T ***
17006689-G-T 14894809-G-T ***
17023460-G-A 14911580-G-A ***
17023468-G-T 14911588-G-T ***
17023469-A-T 14911589-A-T ***
17257629-A-C 15145749-A-C ***
17307364-C-G 15195484-C-G ***
16884860-A-C 14772980-A-C ***
17353687-A-C 15241807-A-C ***
17475223-C-T 15363343-C-T ***
17600079-G-T 15488199-G-T ***
17658003-C-A 15546123-C-A ***
17661330-G-T 15549450-G-T ***
17741468-C-A 15629588-C-A ***
17793269-C-A 15681389-C-A ***
17912934-T-C 15801054-T-C ***
17913551-A-C 15801671-A-C ***
17963602-T-G 15851722-T-G ***
17963624-T-G 15851744-T-G ***
16884863-G-A 14772983-G-A ***
16884859-G-A 14772979-G-A ***
15696862-T-C 13584982-T-C ***
16057395-C-T 13945515-C-T ***
15696866-T-C 13584986-T-C ***
15725810-C-A 13613930-C-A ***
15731455-A-T 13619575-A-T ***
15746294-C-T 13634414-C-T ***
15808878-C-A 13696998-C-A ***
15974385-C-A 13862505-C-A ***
15974490-G-A 13862610-G-A ***
15974972-A-C 13863092-A-C ***
15997258-A-C 13885378-A-C ***
16020282-C-A 13908402-C-A ***
16049116-A-T 13937236-A-T ***
16060731-C-A 13948851-C-A ***
16884845-C-T 14772965-C-T ***
16070570-C-A 13958690-C-A ***
16150137-T-A 14038257-T-A P8_Dst ***
16241813-G-T 14129933-G-T ***
16270374-G-A 14158494-G-A ***
16312526-C-A 14200646-C-A ***
16354140-G-T 14242260-G-T ***
16484341-C-A 14372461-C-A ***
16514632-C-A 14402752-C-A ***
16553943-G-C 14442063-G-C ***
16602837-C-A 14490957-C-A ***
16691391-C-A 14579511-C-A ***
21175749-CAAAAAAAA-C 19013863-CAAAAAAAA-C 27×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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