Napier

FTDNA: 514512, BigY2: 514512

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > DF21/S192 > FGC3213 > ZZ1 > S3058 > S424 > S426 > S190 > FGC3215 > ZZ23 > Y12464 > ZZ25 > Z17998 > Y16002 > Z17999 > Z18000 > Z36749

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
514512		BigY2
514512		Manual
Edits
26020818-C-T 23874671-C-T P1_Y1 ***A*
8568432-T-G 8700391-T-G Z214 FT80599Z300 F1314 YY+**
2970310-AAT-A 3102269-AAT-A **+
8657376-T-G 8789335-T-G Y87638 YY++
13806432-G-T 11685726-G-T Y89640 DYZ17 ++
15348132-A-G 13236251-A-G Y93594 YY++
17574522-G-A 15462642-G-A Y99584 YY++
18398941-C-G 16287061-C-G Y101893 P6_Gap ++
22460403-G-C 20298517-G-C FT457660 DYZ19 ++
6286707-TTG-T 6418666-TTG-T IR3_Dst **
16489856-A-C 14377976-A-C CTS5810 ****
6698849-G-T 6830808-G-T **
21086160-AC-A 18924274-AC-A **
21283207-T-TA 19121321-T-TA 8×A**
18243910-C-A 16132030-C-A **
8673225-T-A 8805184-T-A Z8887 **
9957962-C-T 10120353-C-T **
19411996-A-AAG 17300116-A-AAG **
23831311-A-T 21669425-A-T **
19927008-A-T 17815128-A-T P5_Prx **
15221278-G-A 13109364-G-A **
15221291-A-G 13109377-A-G **
18340487-CAT-C 16228607-CAT-C P6_Prx **
21086167-T-A 18924281-T-A **
58975957-C-G 56829810-C-G **
26047513-G-T 23901366-G-T P1_Y1 **
13457991-C-A 11302315-C-A **
22215236-A-G 20053350-A-G **
3591259-C-A 3723218-C-A **
6786929-G-T 6918888-G-T **
11022043-C-T **
11022045-C-T **
17538093-C-A 15426213-C-A **
15430299-C-A 13318419-C-A **
2783686-T-A 2915645-T-A **
10651654-T-C **
17804386-C-A 15692506-C-A **
2740459-G-A 2872418-G-A **
2852784-A-G 2984743-A-G **
2855460-C-G 2987419-C-G **
2948437-G-T 3080396-G-T **
2960054-T-C 3092013-T-C **
2960062-C-T 3092021-C-T 17×A**
3009096-T-G 3141055-T-G **
3009202-T-C 3141161-T-C **
3009203-T-C 3141162-T-C **
3011652-C-G 3143611-C-G **
3046425-A-T 3178384-A-T **
3074775-G-C 3206734-G-C **
3074798-G-C 3206757-G-C **
3158868-C-A 3290827-C-A **
3279989-G-C 3411948-G-C FT316692 **
3285833-C-A 3417792-C-A **
3340608-T-C 3472567-T-C **
3649152-C-T 3781111-C-T **
3680417-A-G 3812376-A-G **
3818081-A-G 3950040-A-G **
3877065-A-C 4009024-A-C **
3985123-C-A 4117082-C-A **
3986067-T-G 4118026-T-G **
4069532-T-G 4201491-T-G **
4087804-C-A 4219763-C-A **
4113116-T-G 4245075-T-G 16×A**
4114685-A-ATT 4246644-A-ATT 15×T**
4160496-T-C 4292455-T-C **
4208424-G-T 4340383-G-T **
4270532-G-T 4402491-G-T **
4272613-A-T 4404572-A-T **
4282541-C-A 4414500-C-A **
4351465-C-T 4483424-C-T **
4444764-T-C 4576723-T-C **
4534123-C-A 4666082-C-A **
4604450-G-T 4736409-G-T **
4626365-G-T 4758324-G-T **
4703626-T-C 4835585-T-C **
4757337-T-A 4889296-T-A **
4888623-A-T 5020582-A-T **
4918722-C-A 5050681-C-A **
4919598-C-G 5051557-C-G **
4929160-T-A 5061119-T-A **
4929188-C-A 5061147-C-A **
4937064-G-C 5069023-G-C Y25088 **
5059607-C-A 5191566-C-A **
5107875-A-T 5239834-A-T **
5126215-T-G 5258174-T-G **
5212486-A-C 5344445-A-C **
5358875-G-T 5490834-G-T **
5367813-T-G 5499772-T-G **
5426365-C-T 5558324-C-T 16×T**
5443343-A-G 5575302-A-G **
5443396-A-C 5575355-A-C **
5443401-T-C 5575360-T-C **
5443901-T-G 5575860-T-G **
5454733-A-G 5586692-A-G **
5473733-G-C 5605692-G-C **
5687531-C-T 5819490-C-T **
5770362-TTGA-T 5902321-TTGA-T **
5770374-C-T 5902333-C-T **
5817397-A-G 5949356-A-G **
5829230-T-C 5961189-T-C **
5861103-G-T 5993062-G-T **
5905405-C-A 6037364-C-A **
5927377-A-G 6059336-A-G **
5927404-G-T 6059363-G-T **
5967606-C-A 6099565-C-A **
5967609-T-C 6099568-T-C **
6102366-A-G 6234325-A-G **
6277375-C-A 6409334-C-A IR3_Dst **
6277381-A-C 6409340-A-C IR3_Dst **
6277386-CG-C 6409345-CG-C IR3_Dst **
6277391-G-C 6409350-G-C IR3_Dst **
6277393-CA-C 6409352-CA-C IR3_Dst **
6359713-T-C 6491672-T-C **
6369134-A-C 6501093-A-C **
6445153-C-A 6577112-C-A **
6490870-A-G 6622829-A-G **
6514176-T-A 6646135-T-A **
6707419-A-T 6839378-A-T **
6749021-C-T 6880980-C-T **
6771659-T-A 6903618-T-A **
6775319-G-T 6907278-G-T **
6825648-G-T 6957607-G-T **
6971777-C-G 7103736-C-G **
6971787-T-C 7103746-T-C **
6977079-C-A 7109038-C-A **
6978476-G-T 7110435-G-T **
6983675-T-G 7115634-T-G **
7014684-A-G 7146643-A-G **
7019054-A-AAT 7151013-A-AAT 8×T**
7021827-G-T 7153786-G-T **
7021879-T-A 7153838-T-A **
7030500-T-G 7162459-T-G **
7045865-C-A 7177824-C-A **
7050202-C-T 7182161-C-T **
7081063-C-A 7213022-C-A **
7090642-T-G 7222601-T-G **
7090659-G-T 7222618-G-T **
7090714-T-G 7222673-T-G **
7092422-C-A 7224381-C-A **
7093761-T-C 7225720-T-C FT404955 **
7134030-A-G 7265989-A-G **
7139166-A-G 7271125-A-G **
7139216-A-G 7271175-A-G **
7148133-C-T 7280092-C-T **
7155620-GA-G 7287579-GA-G **
7188362-C-A 7320321-C-A **
7197589-TA-T 7329548-TA-T **
7221668-T-A 7353627-T-A **
7228371-G-A 7360330-G-A **
7235060-A-T 7367019-A-T **
7241776-T-C 7373735-T-C **
7248088-T-C 7380047-T-C **
7254886-T-A 7386845-T-A **
7255213-G-C 7387172-G-C **
7271184-C-A 7403143-C-A **
7333974-G-T 7465933-G-T **
7339032-A-G 7470991-A-G **
7432395-C-A 7564354-C-A **
7531419-C-A 7663378-C-A **
7541095-C-A 7673054-C-A **
7608512-T-C 7740471-T-C **
7608523-C-A 7740482-C-A **
7608535-T-C 7740494-T-C **
7861149-C-A 7993108-C-A **
7866134-G-T 7998093-G-T **
7989339-T-C 8121298-T-C **
8016993-C-A 8148952-C-A **
8036152-G-T 8168111-G-T **
8230387-A-G 8362346-A-G **
8269716-G-T 8401675-G-T **
8290920-T-C 8422879-T-C **
8371811-A-C 8503770-A-C **
8452153-G-T 8584112-G-T **
8631418-A-C 8763377-A-C **
8631424-A-C 8763383-A-C **
8737677-C-T 8869636-C-T **
8760542-GAC-G 8892501-GAC-G **
8760553-G-T 8892512-G-T **
8776569-T-A 8908528-T-A **
8776570-TTAA-T 8908529-TTAA-T **
8776579-T-C 8908538-T-C **
8807616-G-T 8939575-G-T **
9063209-C-A 9225600-C-A **
9063211-A-C 9225602-A-C **
9070069-G-A 9232460-G-A **
9231771-G-A 9394162-G-A **
9239388-C-G 9401779-C-G **
9438206-G-A 9600597-G-A **
9441534-A-T 9603925-A-T **
9441575-G-T 9603966-G-T **
9461766-T-G 9624157-T-G **
9498733-A-G 9661124-A-G **
9498755-G-A 9661146-G-A **
9515137-T-G 9677528-T-G **
9589946-T-TC 9752337-T-TC IR3_Prx **
9620171-CAA-C 9782562-CAA-C IR3_Prx 11×A**
9678324-T-G 9840715-T-G IR3_Prx **
9716808-A-ACAC 9879199-A-ACAC IR3_Prx **
9813373-G-A 9975764-G-A **
9843183-C-A 10005574-C-A **
9843184-C-A 10005575-C-A 15×A**
9925422-C-G 10087813-C-G **
9958073-T-A 10120464-T-A **
9968358-G-T 10130749-G-T **
9979153-T-G 10141544-T-G **
10026333-A-G 10188724-A-G **
10035924-C-A 10198315-C-A **
10037703-A-T 10200094-A-T **
10037845-C-A 10200236-C-A **
10040152-G-T 10202543-G-T **
10651602-C-A **
10655106-CTCCAT-C **
10667024-C-CGGTT **
10667025-A-AC **
10667044-C-G **
10669251-G-T **
10685909-C-A **
10686735-C-A **
10693680-A-T **
10693915-A-T **
10746920-T-C **
10759768-T-TA **
10759770-AT-A **
10759801-A-G **
10760445-A-G **
10794236-C-A **
10794241-T-A **
10794244-C-A **
10794274-C-G **
10794288-C-A **
10800994-C-T **
10801489-C-G **
10801670-T-G **
10801674-T-A **
10801682-C-CTTTTG **
10801727-C-G **
10822675-C-A **
10824767-G-T **
10834508-T-C **
10834520-A-C **
10834528-T-G **
10834541-C-A FT433332 **
10834559-A-C **
10844869-A-C **
10851797-C-T **
10851921-T-C **
10851939-A-C **
10860950-C-A **
10861112-A-T **
10861161-C-G **
10876902-CTTTTA-C **
10876910-TTCTTC-T **
10877727-C-A **
10877899-T-A **
10905470-A-C **
10905474-A-T **
10905475-A-C **
10905481-G-T **
10905482-C-G **
10905493-G-C **
10905520-T-G **
10907463-A-C **
10930392-T-C **
10930393-G-C **
10932899-C-A **
10947106-A-T **
10973982-C-T **
10988537-TTTTATTCCACTCC-T **
10988554-T-G **
10989523-C-T **
10999860-A-T **
11003750-C-CTTCTT **
11003752-C-CTACTG **
11007252-C-T **
11007262-A-C **
11007269-A-T **
11007275-C-T FT393464 **
11007277-A-C **
11007302-C-G **
11007310-C-A **
11007328-T-C **
11013590-C-A **
11022148-T-C **
13198668-G-T 11042992-G-T **
13215603-C-G 11059927-C-G **
13236519-C-A 11080843-C-A **
13280503-A-T 11124827-A-T **
13307768-A-C 11152092-A-C **
13309631-T-C 11153955-T-C **
13315646-G-T 11159970-G-T **
13324174-C-G 11168498-C-G **
13326326-A-G 11170650-A-G **
13461024-C-A 11305348-C-A **
13473948-TA-T 11318272-TA-T **
13473964-C-G 11318288-C-G **
13487696-T-A 11332020-T-A **
13487739-T-C 11332063-T-C **
13487741-CCT-C 11332065-CCT-C **
13487751-C-CAAT 11332075-C-CAAT **
13487755-AACC-A 11332079-AACC-A **
13487762-C-A 11332086-C-A **
13558225-G-T 11402549-G-T **
13596397-T-G 11440721-T-G **
13596450-A-T 11440774-A-T **
13596478-G-T 11440802-G-T **
13596479-A-C 11440803-A-C **
13661722-C-A 11506046-C-A DYZ17 **
13717531-C-A 11561855-C-A DYZ17 **
11665196-A-C DYZ17 **
11665207-A-T DYZ17 **
11666314-A-C DYZ17 **
11672811-C-G DYZ17 **
11675636-G-A DYZ17 **
11677694-C-A DYZ17 **
13798725-A-G 11678019-A-G DYZ17 **
13803299-A-T 11682593-A-T DYZ17 **
13803307-C-G 11682601-C-G DYZ17 **
13803315-A-T 11682609-A-T DYZ17 **
13811067-A-G 11690361-A-G DYZ17 11×GGAAT**
13811078-G-T 11690372-G-T DYZ17 **
13840770-G-C 11720064-G-C DYZ17 **
13846666-A-G 11725960-A-G DYZ17 **
13857332-C-A 11736626-C-A DYZ17 **
13859232-G-T 11738526-G-T DYZ17 **
13893689-A-G 11772983-A-G **
13894273-A-T 11773567-A-T **
13894301-T-A 11773595-T-A **
13894321-G-C 11773615-G-C **
13932468-C-A 11811762-C-A **
13935038-C-A 11814332-C-A **
13938848-C-A 11818142-C-A **
13946262-A-G 11825556-A-G **
13952593-C-A 11831887-C-A **
13961586-A-T 11840880-A-T **
13973952-C-G 11853246-C-G **
13998285-T-A 11877579-T-A **
14009423-C-A 11888717-C-A **
14021254-G-T 11900548-G-T **
14048459-A-G 11927753-A-G **
14051683-T-G 11930977-T-G **
14070193-C-A 11949487-C-A **
14077848-C-A 11957142-C-A **
14100188-T-C 11979482-T-C **
14100250-A-C 11979544-A-C **
14200549-C-A 12079843-C-A **
14203409-T-C 12082703-T-C **
14212045-T-C 12091339-T-C **
14225761-C-A 12105055-C-A **
14250575-C-A 12129869-C-A **
14373593-T-C 12252889-T-C **
14379422-C-A 12258718-C-A **
14387769-T-G 12267065-T-G **
14395703-T-C 12274999-T-C **
14442957-C-A 12322230-C-A **
14446575-C-T 12325848-C-T **
14448203-T-G 12327476-T-G **
14448287-C-A 12327560-C-A **
14448324-T-C 12327597-T-C **
14448360-A-C 12327633-A-C **
14448393-A-G 12327666-A-G **
14464251-C-A 12343524-C-A **
14467757-C-A 12347026-C-A **
14529130-G-A 12417331-G-A **
14532069-C-A 12420270-C-A **
14533338-A-C 12421539-A-C **
14540509-C-A 12428710-C-A **
14551491-C-G 12439692-C-G **
14551496-G-C 12439697-G-C **
14551504-C-T 12439705-C-T **
14551511-A-C 12439712-A-C **
14551513-A-T 12439714-A-T **
14551523-C-A 12439724-C-A **
14551523-C-CAA 12439724-C-CAA **
14589964-G-T 12478164-G-T **
14630392-A-C 12518461-A-C **
14735058-C-A 12623126-C-A **
14746107-T-A 12634176-T-A **
14784723-TG-T 12672793-TG-T **
14785148-C-A 12673218-C-A **
14802974-A-C 12691045-A-C **
14911020-A-G 12799087-A-G **
14911032-G-T 12799099-G-T **
14911785-A-G 12799852-A-G FT281774 **
14960584-T-C 12848659-T-C **
14985123-T-A 12873191-T-A **
14994281-C-A 12882366-C-A **
15029515-A-T 12917603-A-T **
15034987-G-T 12923075-G-T **
15035014-T-G 12923102-T-G **
15038442-C-A 12926532-C-A **
15065965-G-C 12954057-G-C **
15128114-G-T 13016201-G-T **
15137920-C-A 13026007-C-A **
15173712-G-A 13061798-G-A **
15174708-T-G 13062794-T-G **
15193419-C-A 13081505-C-A **
15193601-A-C 13081687-A-C **
15205918-C-A 13094004-C-A **
15210960-A-T 13099046-A-T **
15210963-A-G 13099049-A-G **
15219057-T-C 13107143-T-C **
15219064-C-A 13107150-C-A **
15221250-ATT-A 13109336-ATT-A **
15221269-A-T 13109355-A-T **
15221298-A-C 13109384-A-C **
15248292-C-T 13136378-C-T **
15264836-C-A 13152925-C-A **
15305674-C-A 13193773-C-A **
15324936-G-C 13213054-G-C **
15338905-G-C 13227023-G-C **
15338942-T-C 13227060-T-C **
15364600-C-A 13252720-C-A **
15392617-C-A 13280737-C-A **
15396448-C-A 13284568-C-A **
15399419-GAAAAA-G 13287539-GAAAAA-G 15×A**
15400185-A-C 13288305-A-C **
15402872-C-T 13290992-C-T **
15411234-T-A 13299354-T-A **
15424611-T-A 13312731-T-A **
15427427-G-C 13315547-G-C **
15449891-C-A 13338011-C-A **
15449920-C-A 13338040-C-A **
15475202-A-C 13363322-A-C **
15479978-C-A 13368098-C-A **
15490510-C-A 13378630-C-A **
15533678-A-G 13421798-A-G **
15604338-G-A 13492458-G-A **
15665707-T-A 13553827-T-A **
15669773-C-A 13557893-C-A **
15684225-T-C 13572345-T-C **
15735623-C-A 13623743-C-A **
15758691-T-G 13646811-T-G **
15758717-C-A 13646837-C-A **
15764148-G-T 13652268-G-T **
15770632-G-A 13658752-G-A **
15777106-C-A 13665226-C-A **
15866082-T-A 13754202-T-A **
15870704-A-G 13758824-A-G **
15870707-T-G 13758827-T-G **
15882061-C-A 13770181-C-A **
15882070-G-A 13770190-G-A **
15909452-C-A 13797572-C-A **
15916222-G-C 13804342-G-C **
15916224-G-C 13804344-G-C **
15928458-C-T 13816578-C-T **
15936570-C-A 13824690-C-A **
15936573-C-A 13824693-C-A **
16001098-T-A 13889218-T-A **
16003792-A-G 13891912-A-G **
16035466-G-A 13923586-G-A **
16036262-CTT-C 13924382-CTT-C 11×T**
16044217-A-G 13932337-A-G **
16063596-T-C 13951716-T-C **
16116392-A-C 14004512-A-C P8_Prx **
16305915-A-G 14194035-A-G **
16309494-C-A 14197614-C-A **
16413457-C-T 14301577-C-T **
16413519-G-C 14301639-G-C **
16424172-C-T 14312292-C-T A16044 **
16430106-C-A 14318226-C-A **
16450202-A-G 14338322-A-G **
16530910-T-C 14419030-T-C **
16530913-G-C 14419033-G-C **
16530916-C-T 14419036-C-T **
16568252-A-T 14456372-A-T **
16577557-T-C 14465677-T-C **
16577774-C-A 14465894-C-A **
16602046-C-A 14490166-C-A **
16602046-C-CA 14490166-C-CA **
16607823-C-T 14495943-C-T **
16626006-G-A 14514126-G-A **
16676523-T-G 14564643-T-G **
16676619-T-G 14564739-T-G **
16730006-A-AC 14618126-A-AC **
16828785-A-C 14716905-A-C **
16855355-G-A 14743475-G-A **
16855363-T-A 14743483-T-A **
16897636-T-A 14785756-T-A **
16904711-T-C 14792831-T-C **
16929959-T-C 14818079-T-C **
16987026-A-C 14875146-A-C **
16987820-T-C 14875940-T-C **
16987824-T-C 14875944-T-C **
16987825-G-A 14875945-G-A **
16987828-A-G 14875948-A-G **
16987835-T-A 14875955-T-A **
17027523-T-G 14915643-T-G **
17030613-G-T 14918733-G-T **
17043026-C-A 14931146-C-A **
17079051-C-A 14967171-C-A **
17092498-G-C 14980618-G-C **
17092630-C-T 14980750-C-T **
17095365-A-C 14983485-A-C **
17098900-C-A 14987020-C-A **
17125289-C-A 15013409-C-A **
17169499-C-A 15057619-C-A **
17175311-C-A 15063431-C-A **
17211238-G-T 15099358-G-T **
17231391-A-G 15119511-A-G **
17275639-C-A 15163759-C-A **
17340899-C-A 15229019-C-A **
17353705-T-G 15241825-T-G **
17362733-C-A 15250853-C-A **
17371060-C-A 15259180-C-A **
17383744-C-A 15271864-C-A **
17434013-C-A 15322133-C-A **
17440415-T-C 15328535-T-C **
17466476-C-A 15354596-C-A **
17676263-C-A 15564383-C-A **
17693686-A-C 15581806-A-C **
17707328-G-A 15595448-G-A **
17718440-G-T 15606560-G-T **
17728689-C-A 15616809-C-A Y100049 **
17804397-A-C 15692517-A-C **
17834374-G-C 15722494-G-C **
17834385-C-T 15722505-C-T **
17859723-C-A 15747843-C-A **
17859755-A-G 15747875-A-G **
17870778-C-A 15758898-C-A **
17882866-G-A 15770986-G-A **
17968907-A-C 15857027-A-C **
18071578-C-A 15959698-C-A **
18098906-C-T 15987026-C-T **
18244556-C-A 16132676-C-A **
18274916-ATG-A 16163036-ATG-A P6_Prx **
18328816-A-C 16216936-A-C P6_Prx **
18346361-A-C 16234481-A-C P6_Prx **
18346367-G-C 16234487-G-C P6_Prx **
18346439-G-T 16234559-G-T P6_Prx **
18365596-A-C 16253716-A-C P6_Prx **
18365602-A-C 16253722-A-C P6_Prx **
18365611-CAA-C 16253731-CAA-C P6_Prx **
18401249-AAT-A 16289369-AAT-A P6_Gap **
18480045-A-AC 16368165-A-AC P6_Dst **
18573494-T-A 16461614-T-A **
18647560-A-C 16535680-A-C **
18653539-C-A 16541659-C-A **
18682536-G-A 16570656-G-A **
18730451-A-G 16618571-A-G **
18742477-A-T 16630597-A-T **
18752845-C-A 16640965-C-A **
18793535-C-A 16681655-C-A **
18812121-T-C 16700241-T-C **
18812131-C-A 16700251-C-A **
18965869-C-A 16853989-C-A FT392603 **
18978761-A-T 16866881-A-T **
18982492-C-A 16870612-C-A **
19013995-G-A 16902115-G-A **
19020086-T-G 16908206-T-G **
19020117-C-A 16908237-C-A **
19034227-T-G 16922347-T-G **
19049645-C-A 16937765-C-A **
19065349-G-T 16953469-G-T **
19081181-C-A 16969301-C-A **
19111456-GT-G 16999576-GT-G **
19137588-T-C 17025708-T-C **
19200902-C-A 17089022-C-A **
19202754-C-T 17090874-C-T **
19202926-CT-C 17091046-CT-C **
19253399-A-C 17141519-A-C **
19254491-G-A 17142611-G-A Y136800 **
19272096-T-G 17160216-T-G **
19301607-G-T 17189727-G-T **
19356325-C-G 17244445-C-G **
19373760-T-C 17261880-T-C **
19379677-T-A 17267797-T-A **
19403963-T-G 17292083-T-G **
19412762-C-A 17300882-C-A **
19415609-A-G 17303729-A-G **
19460330-T-C 17348450-T-C **
19489283-A-C 17377403-A-C **
19507104-A-G 17395224-A-G **
19515187-A-T 17403307-A-T **
19522700-T-G 17410820-T-G **
19531376-A-G 17419496-A-G **
19532870-C-A 17420990-C-A **
19609524-T-G 17497644-T-G P5_Prx **
19927002-A-C 17815122-A-C P5_Prx **
19930061-T-TA 17818181-T-TA P5_Prx **
19981765-T-A 17869885-T-A P5_Prx **
19981875-T-TG 17869995-T-TG P5_Prx **
19998714-A-AG 17886834-A-AG P5_Prx **
19998725-C-A 17886845-C-A P5_Prx **
19998730-A-T 17886850-A-T P5_Prx **
20001332-G-C 17889452-G-C P5_Prx **
20526318-C-G 18364432-C-G P5_Dst 9×T**
20526319-T-TA 18364433-T-TA P5_Dst **
20569385-G-T 18407499-G-T P5_Dst **
20593052-ATC-A 18431166-ATC-A P5_Dst **
20593056-A-AC 18431170-A-AC P5_Dst **
20785968-T-A 18624082-T-A P4_Prx **
20802976-A-T 18641090-A-T P4_Gap **
20838932-G-A 18677046-G-A P4_Gap **
20993620-G-A 18831734-G-A P4_Dst **
21061655-G-T 18899769-G-T **
21069817-C-G 18907931-C-G **
21069893-A-T 18908007-A-T **
21086169-G-A 18924283-G-A **
21086172-C-A 18924286-C-A **
21095775-C-G 18933889-C-G **
21155229-C-A 18993343-C-A **
21184511-C-A 19022625-C-A **
21200809-C-A 19038923-C-A **
21220225-C-A 19058339-C-A **
21238110-C-A 19076224-C-A **
21240682-G-T 19078796-G-T **
21283343-C-A 19121457-C-A **
21333994-C-A 19172108-C-A **
21362558-G-A 19200672-G-A **
21371693-A-G 19209807-A-G **
21388654-T-G 19226768-T-G **
21394895-T-C 19233009-T-C **
21433213-T-C 19271327-T-C **
21433324-T-G 19271438-T-G **
21472409-C-G 19310523-C-G **
21482780-TTGAGA-T 19320894-TTGAGA-T **
21513749-A-G 19351863-A-G **
21513760-A-G 19351874-A-G **
21515871-A-AG 19353985-A-AG **
21563137-G-T 19401251-G-T **
21588077-C-T 19426191-C-T **
21597073-C-A 19435187-C-A **
21677554-C-A 19515668-C-A **
21698433-G-T 19536547-G-T **
21738681-G-T 19576795-G-T **
21834313-C-A 19672427-C-A **
21852695-G-T 19690809-G-T **
21856796-G-T 19694910-G-T **
21875833-C-A 19713947-C-A **
21895444-TATGAC-T 19733558-TATGAC-T **
21895495-A-G 19733609-A-G **
21971241-C-A 19809355-C-A **
22018041-T-G 19856155-T-G **
22023226-C-T 19861340-C-T **
22056191-G-A 19894305-G-A **
22077332-C-A 19915446-C-A **
22215235-G-T 20053349-G-T **
22215238-A-G 20053352-A-G **
22215246-G-A 20053360-G-A FGC1451 **
22236478-C-A 20074592-C-A DYZ19 **
22422118-T-TA 20260232-T-TA DYZ19 **
22529588-C-A 20367702-C-A **
22537025-T-A 20375139-T-A **
22562985-G-A 20401099-G-A **
22592943-T-G 20431057-T-G **
22602126-C-A 20440240-C-A **
22613876-C-A 20451990-C-A **
22625107-A-C 20463221-A-C **
22661998-C-A 20500112-C-A **
22739689-C-G 20577803-C-G **
22767401-C-A 20605515-C-A **
22791027-G-C 20629141-G-C **
22829656-AAAAAAAT-A 20667770-AAAAAAAT-A **
22896090-G-T 20734204-G-T **
22914631-C-A 20752745-C-A **
22938932-C-A 20777046-C-A **
22993311-C-A 20831425-C-A Y79008 **
22994727-C-A 20832841-C-A **
23029916-C-A 20868030-C-A **
23054415-T-A 20892529-T-A **
23076214-A-G 20914328-A-G **
23096996-T-C 20935110-T-C **
23264154-C-A 21102268-C-A **
23315958-A-G 21154072-A-G **
23373178-G-A 21211292-G-A **
23377852-C-A 21215966-C-A **
23386472-T-A 21224586-T-A **
23434455-C-A 21272569-C-A **
23465301-C-A 21303415-C-A **
23475400-T-G 21313514-T-G **
23475428-T-C 21313542-T-C **
23475475-T-G 21313589-T-G **
23475518-A-G 21313632-A-G **
23476283-A-T 21314397-A-T **
23476307-A-G 21314421-A-G **
23476311-A-AC 21314425-A-AC **
23723623-T-A 21561737-T-A **
23741940-G-T 21580054-G-T BY164112 **
23745543-G-T 21583657-G-T **
23831279-GA-T 21669393-GA-T **
23869756-C-A 21707870-C-A **
23885377-G-T 21723491-G-T **
23885381-C-T 21723495-C-T **
23954154-C-A 21808007-C-A **
23955038-A-T 21808891-A-T **
23955064-T-C 21808917-T-C **
24124351-A-G 21978204-A-G P3_b1 **
24376099-A-T 22229952-A-T **
24378632-CT-C 22232485-CT-C **
24415804-T-A 22269657-T-A **
24600659-A-T 22454512-A-T P3_t2 **
24637481-T-TGG 22491334-T-TGG P3_t2 **
24671062-G-T 22524915-G-T P3_b2 **
24878193-G-A 22732046-G-A g1 **
24904645-C-T 22758498-C-T g1 **
24904655-C-A 22758508-C-A g1 **
25872064-T-A 23725917-T-A P1_Y1 **
26045960-G-T 23899813-G-T P1_Y1 **
26046022-A-T 23899875-A-T P1_Y1 **
26047515-G-T 23901368-G-T P1_Y1 **
26153979-GT-G 24007832-GT-G P1_Y1 **
26199613-G-GTC 24053466-G-GTC P1_Y1 **
26199689-A-T 24053542-A-T P1_Y1 **
26199713-A-C 24053566-A-C P1_Y1 **
26970964-A-G 24824817-A-G P1_r4 **
27417818-G-T 25271671-G-T P1_g3 **
27829159-G-T 25683012-G-T P1_Y2 **
27829242-G-T 25683095-G-T P1_Y2 **
27829246-A-C 25683099-A-C P1_Y2 **
27877626-C-A 25731479-C-A P1_Y2 **
27916416-T-A 25770269-T-A P1_Y2 **
28497388-C-G 26351241-C-G **
28499449-C-G 26353302-C-G **
28501390-C-A 26355243-C-A **
28545012-T-A 26398865-T-A **
28545016-C-A 26398869-C-A 22×A**
28558537-C-A 26412390-C-A **
28570480-A-G 26424333-A-G **
28582259-A-C 26436112-A-C **
28591663-C-A 26445516-C-A **
28609116-C-G 26462969-C-G **
28609137-C-A 26462990-C-A **
28618363-C-A 26472216-C-A **
28657426-C-A 26511279-C-A **
28661374-C-T 26515227-C-T **
28711616-C-A 26565469-C-A **
28742612-C-G 26596465-C-G **
28745103-A-T 26598956-A-T **
28745108-G-A 26598961-G-A **
28754548-C-A 26608401-C-A **
28759541-G-A 26613394-G-A **
28760309-G-T 26614162-G-T **
28773016-A-C 26626869-A-C **
28778901-T-A 26632754-T-A **
28778933-A-T 26632786-A-T **
56835584-G-A **
56835612-T-A **
56845259-C-A **
56848918-A-G **
6938-A-T **
33243-C-T **
8644547-C-CTA 8776506-C-CTA 8×TA***
13448327-G-C,T 11292651-G-C,T ***
13457122-T-C 11301446-T-C ***
13474706-A-T 11319030-A-T ***
17867916-C-T 15756036-C-T F22210 ***
16227862-CAAGG-C 14115982-CAAGG-C 6×AAGG***
22812657-TA-T 20650771-TA-T ***
6120234-C-CATAT 6252193-C-CATAT 14×AT***
20865487-GTATATA-G 18703601-GTATATA-G P4_Dst 9×TA***
6931219-C-A 7063178-C-A ***
22268681-C-T 20106795-C-T DYZ19 ***
22319523-T-C 20157637-T-C DYZ19 ******
22488132-G-C 20326246-G-C DYZ19 ***
25013111-G-A 22866964-G-A g1 ***
25079891-C-T 22933744-C-T g1 ***
2763813-T-C 2895772-T-C ***
2860003-TG-G,TTT 2991962-TG-G,TTT ***
3286057-C-A 3418016-C-A ***
3688856-C-T 3820815-C-T ***
3790878-GTATATATA-G,GTATATA 3922837-GTATATATA-G,GTATATA 21×TA***
4241711-C-A 4373670-C-A ***
6650881-C-A 6782840-C-A ***
6672461-T-C 6804420-T-C ***
7130760-C-A 7262719-C-A ***
7374535-A-T 7506494-A-T ***
7374798-C-A 7506757-C-A ***
7590962-C-A 7722921-C-A ***
7783780-GAA-G,GA 7915739-GAA-G,GA 12×A***
8558525-A-G 8690484-A-G ***
8676869-C-A 8808828-C-A ***
10801690-T-G ***
10801709-T-G ***
10801712-C-G ***
10892572-C-T ***
10892578-C-G ***
10892588-C-G ***
10940385-C-A,G ***
10988572-T-C ***
11014441-C-T ***
11014471-CC-CG,G ***
13236461-C-T 11080785-C-T ***
13355154-C-A 11199478-C-A ***
13463580-C-A 11307904-C-A ***
13463650-C-A 11307974-C-A ***
13466556-C-A 11310880-C-A ***
13473918-C-G 11318242-C-G ***
13488646-G-A 11332970-G-A ***
11655509-G-A DYZ17 ***
11655767-C-A DYZ17 ***
13937531-A-G 11816825-A-G ***
13992175-G-A 11871469-G-A ***
14298197-C-A 12177491-C-A ***
14513392-C-CA 12401597-C-CA ***
14566770-CAAAA-C,CAAAAA 12454970-CAAAA-C,CAAAAA 13×A***
14722202-C-A 12610270-C-A ***
14757453-C-A 12645522-C-A ***
14916890-CAAA-C,CAA 12804957-CAAA-C,CAA 15×A***
15557033-CAAAAA-C,CAA 13445153-CAAAAA-C,CAA 18×A***
15746849-A-G 13634969-A-G ***
16301002-G-A 14189122-G-A 18×A***
16430208-C-A 14318328-C-A ***
16521003-A-G 14409123-A-G ***
16530879-T-A 14418999-T-A ***
16530881-C-G 14419001-C-G ***
16530889-G-T 14419009-G-T ***
16811106-C-A 14699226-C-A ***
16915183-C-A 14803303-C-A ***
17032451-A-G 14920571-A-G ***
17078987-C-A 14967107-C-A ***
17080129-C-A 14968249-C-A ***
17284763-C-A 15172883-C-A ***
17319855-C-A 15207975-C-A ***
17355745-C-A 15243865-C-A ***
17477501-T-G 15365621-T-G ***
17489660-C-A 15377780-C-A ***
17580013-C-A 15468133-C-A ***
17637724-C-A 15525844-C-A ***
17918489-C-A 15806609-C-A ***
18082910-A-AT 15971030-A-AT 9×T***
18384171-C-A 16272291-C-A P6_Gap ***
18491626-CT-C,CTT 16379746-CT-C,CTT P6_Dst 15×T***
18593287-C-A 16481407-C-A ***
18867261-C-A 16755381-C-A ***
18873439-T-G 16761559-T-G ***
19052475-C-A 16940595-C-A ***
19059445-C-A 16947565-C-A ***
19106416-A-G 16994536-A-G ***
21438092-C-A 19276206-C-A ***
21617775-T-A 19455889-T-A ***
22115493-A-T 19953607-A-T ***
22185347-TAA-T 20023461-TAA-T 13×A***
22201827-C-A 20039941-C-A ***
22538109-A-G 20376223-A-G ***
23047821-A-T 20885935-A-T ***
23427071-T-C 21265185-T-C ***
23773323-TACAC-T,TAC 21611437-TACAC-T,TAC 24×AC***
28719743-C-A 26573596-C-A ***
28728219-C-A 26582072-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Mutation Notes:

Kit POSITION-REF-ALT (hg19) POSITION-REF-ALT (hg38) Note
Manual21464187-G-GGAAAGAAA19302301-G-GGAAAGAAA4 reads cover the region and are all positive.
Manual19536319-C-T17424439-C-T8T
Manual19798357-T-C17686477-T-C13T 11C