Maule

FTDNA: 14125, BigY2: 14125

Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z41150 > Z49 > A21822 > S8183 > Y4356 > Y4354 > S8172

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
14125		BigY2
14125
24262721-C-A 22116574-C-A P3_b1 ***A*
18344830-A-G 16232950-A-G P6_Prx ***A*
22304610-G-T 20142724-G-T DYZ19 A*
6212657-A-G 6344616-A-G IR3_Dst ***A*
22290834-C-A 20128948-C-A DYZ19 ***A*
18320598-G-A 16208718-G-A P6_Prx ***A*
19837234-C-T 17725354-C-T P5_Prx ***A*
17832980-G-A 15721100-G-A BY33896 Y72439 YY++
18106707-G-T 15994827-G-T Y73068 YY++
18115189-CTATCTATG-C 16003309-CTATCTATG-C ++
21413551-A-T 19251665-A-T BY33897 Y76439 YY++
18561648-T-A 16449768-T-A Y73634 YY++
16877956-C-T 14766076-C-T A20445 YY++
21464841-T-C 19302955-T-C Y76527 YY++
22832976-G-A 20671090-G-A Y78742 YY++
22860880-C-A 20698994-C-A Y78800 YY++
17032401-G-C 14920521-G-C Y70951 YY++
19234009-A-G 17122129-A-G Y74933 YY++
16551431-C-CT 14439551-C-CT ++
14202405-C-T 12081699-C-T Y66172 YY++
7274816-CATTTATTT-C 7406775-CATTTATTT-C 11×ATTT++
7951881-T-C 8083840-T-C Y62882 YY++
8534746-G-A 8666705-G-A Y64009 YY++
8835888-A-G 8967847-A-G A20446 YY++
13660176-G-A 11504500-G-A BY87397 ++
16913982-A-G 14802102-A-G Y70725 YY++
16483931-A-G 14372051-A-G BY33895 Y69993 YY++
14230809-C-T 12110103-C-T Y66240 YY++
15658455-CA-C 13546575-CA-C ++
22430209-G-A 20268323-G-A BY47940 DYZ19 *
26092161-A-G 23946014-A-G P1_Y1 ****
15474851-C-A 13362971-C-A **
15468418-C-A 13356538-C-A **
15098012-T-C 12986100-T-C **
15114843-T-A 13002930-T-A **
15168235-A-G 13056321-A-G **
15366072-G-T 13254192-G-T **
15081084-T-A 12969174-T-A **
15379895-T-C 13268015-T-C **
15290675-C-A 13178774-C-A **
15183889-C-A 13071975-C-A **
15401114-T-G 13289234-T-G **
15171382-C-T 13059468-C-T **
15698757-GACACAC-G 13586877-GACACAC-G 24×AC**
15049942-C-A 12938033-C-A **
14986567-C-A 12874635-C-A **
14908480-T-G 12796547-T-G **
14908473-GGCTA-G 12796540-GGCTA-G **
14908472-C-CAAAA 12796539-C-CAAAA **
14671746-G-T 12559812-G-T **
14649509-C-A 12537574-C-A **
15701078-A-G 13589198-A-G **
14635525-G-T 12523594-G-T **
14549214-G-A 12437415-G-A **
14544119-A-T 12432320-A-T **
14540532-C-A 12428733-C-A **
14511970-C-A 12400175-C-A **
14493482-C-A 12381679-C-A **
15605663-C-A 13493783-C-A **
16318570-G-T 14206690-G-T **
15728823-T-C 13616943-T-C **
16516384-G-A 14404504-G-A **
17143952-A-C 15032072-A-C **
17023489-C-A 14911609-C-A **
16931848-G-A 14819968-G-A **
16882882-A-G 14771002-A-G **
16877041-G-A 14765161-G-A **
16719660-G-T 14607780-G-T **
16701907-G-A 14590027-G-A **
16689757-C-A 14577877-C-A **
16682757-A-G 14570877-A-G **
16540520-T-C 14428640-T-C **
16533246-G-C 14421366-G-C **
16464669-T-C 14352789-T-C **
15729111-A-G 13617231-A-G **
14470440-C-A 12349709-C-A **
16297333-T-TC 14185453-T-TC **
16278618-G-T 14166738-G-T **
16071133-A-G 13959253-A-G **
16056029-C-A 13944149-C-A **
16040989-T-G 13929109-T-G **
15946685-G-A 13834805-G-A **
15921886-C-G 13810006-C-G **
15918465-C-A 13806585-C-A **
15844679-T-C 13732799-T-C **
15773546-A-C 13661666-A-C **
15740951-C-A 13629071-C-A **
14474852-G-C 12354121-G-C **
13975773-C-A 11855067-C-A **
14457524-T-A 12336797-T-A **
11031169-T-A **
13488953-C-A 11333277-C-A **
13461704-C-T 11306028-C-T **
13433100-T-A 11277424-T-A **
13402667-C-A 11246991-C-A **
13242428-T-G 11086752-T-G **
13227005-C-A 11071329-C-A **
13224674-C-A 11068998-C-A **
13196838-T-C 11041162-T-C **
11034734-C-T **
11033546-C-A **
11032704-C-A **
11030860-C-T **
13504237-G-T 11348561-G-T **
11030857-T-C **
11030831-G-A **
11030826-C-G **
11030818-A-T **
11030794-CTCT-C **
11030790-TCA-T **
11030789-C-T **
11030786-C-G **
11027478-T-G **
11027337-A-G **
11018574-C-A **
11018286-TCAACA-T **
13488981-C-T 11333305-C-T **
13527751-A-T 11372075-A-T **
14446628-C-A 12325901-C-A **
13995901-C-A 11875195-C-A **
14398328-C-T 12277624-C-T **
14324528-C-A 12203822-C-A **
14267806-T-C 12147100-T-C **
14224182-C-T 12103476-C-T FGC57104 **
14212743-G-A 12092037-G-A **
14187241-A-T 12066535-A-T **
14184529-A-C 12063823-A-C **
14100935-G-T 11980229-G-T **
14100336-C-A 11979630-C-A **
14080142-G-T 11959436-G-T **
14046643-C-G 11925937-C-G **
13987027-C-A 11866321-C-A **
13551263-A-G 11395587-A-G **
17374542-A-G 15262662-A-G **
13971609-G-GAGGAAA 11850903-G-GAGGAAA **
13944291-C-T 11823585-C-T **
13938109-C-A 11817403-C-A **
13913081-T-G 11792375-T-G **
13896978-A-C 11776272-A-C **
11673116-G-A **
11653381-G-T **
11648310-G-A **
13640027-A-C 11484351-A-C **
13630847-G-T 11475171-G-T **
13585053-C-CAA 11429377-C-CAA 19×A**
17250152-C-A 15138272-C-A **
19019376-C-T 16907496-C-T **
17380579-G-A 15268699-G-A Y14048 **
23200901-C-A 21039015-C-A **
26029772-T-C 23883625-T-C P1_Y1 **
25995481-T-TAG 23849334-T-TAG P1_Y1 **
25990666-CA-C 23844519-CA-C P1_Y1 **
25931652-TA-T 23785505-TA-T P1_Y1 8×A**
25870977-C-A 23724830-C-A P1_Y1 **
25870954-TAC-T 23724807-TAC-T P1_Y1 **
24910817-C-T 22764670-C-T g1 **
24573423-C-CTTT 22427276-C-CTTT P3_t2 21×T**
24405206-C-T 22259059-C-T **
23623318-G-A 21461432-G-A **
23360588-AC-A 21198702-AC-A **
23062720-C-A 20900834-C-A **
26379432-A-G 24233285-A-G P1_Y1 **
23061316-G-T 20899430-G-T **
23009386-G-T 20847500-G-T **
22965289-C-A 20803403-C-A **
22884717-T-C 20722831-T-C **
22808795-C-G 20646909-C-G **
22798252-T-A 20636366-T-A **
22691884-A-G 20529998-A-G **
22691858-A-G 20529972-A-G **
22662252-G-A 20500366-G-A **
22544354-G-T 20382468-G-T **
22461435-A-C 20299549-A-C DYZ19 **
22237217-G-T 20075331-G-T DYZ19 **
26366352-G-A 24220205-G-A P1_Y1 **
27466838-A-T 25320691-A-T P1_Y2 **
22124303-G-T 19962417-G-T **
28735191-C-A 26589044-C-A **
56879828-C-T **
56850515-G-T **
56840228-A-G **
56839758-G-T **
56839259-A-T **
56824188-C-A **
28814846-A-G 26668699-A-G **
28814845-C-T 26668698-C-T **
28814839-G-A 26668692-G-A **
28812147-A-AG 26666000-A-AG **
28743193-C-A 26597046-C-A **
28732058-T-G 26585911-T-G **
27633588-G-A 25487441-G-A P1_Y2 **
28727724-T-C 26581577-T-C **
28676447-G-T 26530300-G-T **
28618365-C-A 26472218-C-A **
28600351-T-C 26454204-T-C **
28549903-G-T 26403756-G-T **
28505168-A-T 26359021-A-T **
28478956-G-C 26332809-G-C **
28467389-C-A 26321242-C-A **
28464433-G-T 26318286-G-T **
28463954-G-A 26317807-G-A **
27732462-T-TG 25586315-T-TG P1_Y2 **
27714354-C-A 25568207-C-A P1_Y2 **
22170309-G-T 20008423-G-T **
22086014-G-C 19924128-G-C BY137521 **
17414707-C-T 15302827-C-T Y71634 **
11007040-C-A **
19329484-A-G 17217604-A-G **
19302244-G-T 17190364-G-T **
19298153-G-T 17186273-G-T **
19254312-A-G 17142432-A-G **
19252603-G-T 17140723-G-T **
19145591-G-T 17033711-G-T Y74747 **
19100194-A-T 16988314-A-T **
19081343-G-A 16969463-G-A **
19042548-T-C 16930668-T-C **
19031405-T-A 16919525-T-A **
19031175-G-GT 16919295-G-GT 8×T**
18793502-C-A 16681622-C-A **
19507024-C-A 17395144-C-A **
18703178-A-T 16591298-A-T **
18688475-T-A 16576595-T-A **
18618344-A-T 16506464-A-T **
18577691-C-A 16465811-C-A **
18490253-T-TA 16378373-T-TA P6_Dst **
18196114-C-T 16084234-C-T **
18191516-C-A 16079636-C-A **
18147544-GA-G 16035664-GA-G **
17898552-G-T 15786672-G-T **
17545993-C-A 15434113-C-A **
17512577-C-T 15400697-C-T **
17511809-C-A 15399929-C-A **
19429404-T-C 17317524-T-C **
19544452-C-A 17432572-C-A **
21998963-G-GTT 19837077-G-GTT 11×T**
20902886-A-AC 18741000-A-AC P4_Dst **
21920372-C-A 19758486-C-A **
21836294-GT-G 19674408-GT-G **
21770156-G-A 19608270-G-A **
21554324-C-A 19392438-C-A **
21457226-T-A 19295340-T-A **
21427262-C-A 19265376-C-A **
21422160-C-T 19260274-C-T **
21108160-A-G 18946274-A-G **
21096146-T-C 18934260-T-C **
21003228-T-TC 18841342-T-TC P4_Dst **
20914500-A-AG 18752614-A-AG P4_Dst **
20815653-CA-C 18653767-CA-C P4_Gap **
19547297-CAA-C 17435417-CAA-C **
20751882-T-TC 18589996-T-TC P4_Prx **
20703024-A-T 18541138-A-T P4_Prx **
20677940-T-TA 18516054-T-TA P4_Prx **
20666096-T-C 18504210-T-C P4_Prx **
20643243-T-TAC 18481357-T-TAC P4_Prx **
20643237-G-T 18481351-G-T P4_Prx **
20473074-G-A 18311188-G-A P5_Dst **
20376574-G-A 18214688-G-A P5_Dst **
19949506-G-T 17837626-G-T P5_Prx **
19591339-G-T 17479459-G-T P5_Prx **
19547360-AG-A 17435480-AG-A **
19547311-G-A 17435431-G-A **
11008460-C-A **
10994363-A-T **
11004976-T-C **
4144214-C-A 4276173-C-A **
4563254-A-G 4695213-A-G **
4460084-C-A 4592043-C-A **
4445713-C-A 4577672-C-A **
4433308-C-A 4565267-C-A **
4327024-G-A 4458983-G-A **
4326505-C-A 4458464-C-A **
4322970-G-T 4454929-G-T **
4295961-C-A 4427920-C-A **
4235541-C-A 4367500-C-A **
4160367-C-A 4292326-C-A **
4140484-C-G 4272443-C-G **
4639962-G-A 4771921-G-A **
4122472-A-G 4254431-A-G **
4063421-C-A 4195380-C-A **
4017182-C-A 4149141-C-A **
3889366-C-A 4021325-C-A **
3877134-A-G 4009093-A-G **
3846684-C-A 3978643-C-A **
3846629-C-A 3978588-C-A **
3602668-C-A 3734627-C-A **
3592730-C-A 3724689-C-A **
3559619-C-A 3691578-C-A **
3467865-T-A 3599824-T-A **
4629054-C-A 4761013-C-A **
4640019-T-C 4771978-T-C **
3443949-G-T 3575908-G-T **
5243672-C-A 5375631-C-A **
5645086-C-A 5777045-C-A **
5614226-T-G 5746185-T-G **
5614107-T-G 5746066-T-G **
5526632-T-C 5658591-T-C **
5457930-G-T 5589889-G-T **
5455304-G-T 5587263-G-T **
5405081-C-A 5537040-C-A **
11004971-T-C **
5320169-G-T 5452128-G-T **
5308095-C-A 5440054-C-A **
5293937-G-A 5425896-G-A **
5189569-C-A 5321528-C-A **
4706509-C-A 4838468-C-A **
5035586-G-A 5167545-G-A **
5001851-C-G 5133810-C-G **
4970131-G-T 5102090-G-T **
4969217-C-A 5101176-C-A **
4956672-G-T 5088631-G-T **
4951560-C-G 5083519-C-G **
4921136-G-T 5053095-G-T **
4841686-A-G 4973645-A-G **
4832348-T-C 4964307-T-C **
4832181-A-T 4964140-A-T **
4706609-A-G 4838568-A-G **
3465599-TA-T 3597558-TA-T 11×A**
3443667-G-T 3575626-G-T **
5817900-G-A 5949859-G-A **
4701428-G-T 4833387-G-T **
10969522-C-A **
18253256-C-A 16141376-C-A **
11034748-C-A **
17306708-C-A 15194828-C-A **
22951196-C-A 20789310-C-A **
4065876-C-A 4197835-C-A **
15788141-C-A 13676261-C-A **
10015013-A-T 10177404-A-T **
10946606-CTCCAT-C **
28812130-C-A 26665983-C-A **
3550756-A-C 3682715-A-C **
10893906-C-A **
5905405-C-A 6037364-C-A **
10880363-A-T **
13299209-C-A 11143533-C-A **
14456158-C-A 12335431-C-A **
10973854-C-A **
28814823-A-G 26668676-A-G **
22510647-A-T 20348761-A-T DYZ19 *****
16564350-TGATAGATAGATAGATA-T 14452470-TGATAGATAGATAGATA-T 11×GATA*****
15752641-T-C 13640761-T-C ****
13394011-C-T 11238335-C-T PR4979 **
13488979-C-T 11333303-C-T **
7031076-C-A 7163035-C-A **
20775133-A-AG 18613247-A-AG P4_Prx **
3441927-A-T 3573886-A-T **
3105292-G-T 3237251-G-T **
3437102-G-T 3569061-G-T **
3430600-C-A 3562559-C-A **
3400316-A-T 3532275-A-T **
3389486-G-C 3521445-G-C **
3389451-C-A 3521410-C-A **
3345423-C-T 3477382-C-T **
3326499-G-T 3458458-G-T **
3303466-C-T 3435425-C-T **
3121952-C-A 3253911-C-A **
3116612-C-A 3248571-C-A **
3111756-A-G 3243715-A-G **
3047308-G-A 3179267-G-A **
10883090-G-GTCCAC **
3005933-C-A 3137892-C-A **
2985858-G-C 3117817-G-C **
2918143-G-A 3050102-G-A **
2917730-G-T 3049689-G-T **
2903298-C-A 3035257-C-A **
2785326-A-T 2917285-A-T **
2778491-A-G 2910450-A-G **
2773458-G-T 2905417-G-T **
2772994-A-G 2904953-A-G **
2665551-C-T 2797510-C-T **
10883107-C-G **
5697831-C-T 5829790-C-T **
5320775-T-G 5452734-T-G **
10745098-C-T **
10744820-C-A **
10787008-C-A **
10778241-ACATTC-A **
10775955-TGTTCGGTGCC-T **
10774607-G-A **
10772226-T-C **
10770956-C-A **
10770582-C-A **
10765382-C-T **
10750236-C-T **
5849898-C-A 5981857-C-A **
10683636-A-G **
10794033-C-A **
10666995-G-GGTTAA **
10662423-C-A **
9930086-G-A 10092477-G-A **
9824291-G-A 9986682-G-A **
9511874-C-A 9674265-C-A **
9511858-G-T 9674249-G-T **
9403044-C-A 9565435-C-A **
9076699-A-G 9239090-A-G **
10999469-C-A **
8848284-C-G 8980243-C-G **
10787586-G-A **
10799639-C-A **
8749035-C-A 8880994-C-A **
10927943-T-A **
10979796-T-A **
10970699-C-A **
10958951-TATTCC-T **
10953032-C-T **
10950749-T-G **
10948690-A-G **
11000130-T-A **
10942974-T-A **
10931498-C-A **
10929431-C-T **
10920322-C-A **
10829077-C-A **
10906449-T-C **
10890360-A-C **
10888720-C-A **
10880351-C-T **
10873017-C-A **
10869342-CTCCAT-C **
10856111-C-A **
10844177-C-T **
10840896-C-A **
10838507-G-T **
8761573-C-A 8893532-C-A **
9111408-C-T **
8698732-C-A 8830691-C-A **
6074857-G-T 6206816-G-T **
6505064-C-A 6637023-C-A **
8481967-TAAAA-T 8613926-TAAAA-T 15×A**
6490550-A-T 6622509-A-T **
11004970-A-T **
6456882-T-A 6588841-T-A **
6381581-G-T 6513540-G-T **
6368207-G-T 6500166-G-T **
6352620-C-T 6484579-C-T **
6240991-GAA-G 6372950-GAA-G IR3_Dst 12×A**
6057222-G-T 6189181-G-T **
6582955-T-C 6714914-T-C **
6045158-AC-A 6177117-AC-A **
6003963-G-T 6135922-G-T **
5997450-G-C 6129409-G-C **
5997331-A-T 6129290-A-T **
5997260-A-G 6129219-A-G **
5990752-A-G 6122711-A-G **
5976493-A-G 6108452-A-G **
5959603-C-A 6091562-C-A **
5863935-C-A 5995894-C-A **
5860928-T-C 5992887-T-C **
6576593-GA-G 6708552-GA-G **
6504934-TG-T 6636893-TG-T **
6720596-G-T 6852555-G-T **
7238231-A-G 7370190-A-G **
11001957-TCACTC-T **
8281793-AATGG-A 8413752-AATGG-A **
8016974-C-A 8148933-C-A **
7782934-C-A 7914893-C-A **
7759134-T-C 7891093-T-C **
7578478-A-C 7710437-A-C **
7370217-T-C 7502176-T-C **
7311574-C-A 7443533-C-A **
7254926-C-A 7386885-C-A **
18412389-C-A 16300509-C-A P6_Gap **
7211312-C-A 7343271-C-A **
7099930-C-A 7231889-C-A **
11003388-G-A **
6976535-C-A 7108494-C-A **
7085314-C-A 7217273-C-A **
7098755-A-T 7230714-A-T **
11004936-C-CTCCAT **
7170867-C-G 7302826-C-G **
7172516-A-G 7304475-A-G **
19739507-T-C 17627627-T-C P5_Prx ***
24158287-T-C 22012140-T-C P3_b1 ***
26765999-G-A 24619852-G-A P1_g2 ***
26271532-C-G 24125385-C-G P1_Y1 ***
25411421-C-G 23265274-C-G P2_r2 ***
56843892-C-A ***
25313973-T-C 23167826-T-C P2_r1 ***
56884378-A-G ***
56836124-T-C ***
22247879-G-C 20085993-G-C DYZ19 ***
28784630-G-A 26638483-G-A ***
22237533-C-T 20075647-C-T DYZ19 ***
16533267-G-C 14421387-G-C ******
56879803-A-T ***
22357760-G-A 20195874-G-A DYZ19 ***
16653027-T-A 14541147-T-A ***
10983406-C-A ***
8479417-TC-C,TT 8611376-TC-C,TT ***
5937238-CTCTCTA-C,CTA 6069197-CTCTCTA-C,CTA ***
16738662-G-T 14626782-G-T ***
17115140-C-A 15003260-C-A ***
15685105-G-T 13573225-G-T ***
6917751-G-T 7049710-G-T ***
15218688-C-A 13106774-C-A ***
15059513-C-A 12947605-C-A ***
4244622-ATT-A,AT 4376581-ATT-A,AT 16×T***
14513393-A-G 12401598-A-G ***
14461159-G-T 12340432-G-T ***
22536509-TA-T 20374623-TA-T ***
10795810-C-A ***
13213724-C-T 11058048-C-T ***
11676723-C-A ***
26314756-C-T 24168609-C-T P1_Y1 ***
10693291-A-T ***
15210925-G-T 13099011-G-T ***
10860038-C-A ***
30642-T-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 141251097185380072928107262
Kit: 141251018323982081618052493
Used in age calculations1097185382081618107262
Counts of SNPs1717
Variant counts last updated 2018-10-03 22:07:36.


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