Loughney
FTDNA: 218512, BigY2: 218512, BigY3: 218512MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 218512 | BigY2 218512 | BigY3 218512 |
---|---|---|---|---|---|---|---|---|---|---|
22232005-C-A | 20070119-C-A | DYZ19 | *** | A* | ||||||
24017554-C-T | 21871407-C-T | Y | A* | |||||||
20949855-A-G | 18787969-A-G | P4_Dst | A* | |||||||
22364198-A-T | 20202312-A-T | E611 | DYZ19 | + | ||||||
9143773-T-G | 9306164-T-G | Y | + | |||||||
3140202-A-G | 3272161-A-G | FT80331 | + | |||||||
22437947-C-T | 20276061-C-T | BY43809 | DYZ19 | *** | + | ** | ||||
28733714-GA-G | 26587567-GA-G | 10×A | *** | * | ||||||
13479042-G-T | 11323366-G-T | * | ||||||||
15749115-C-A | 13637235-C-A | ** | ||||||||
15743755-C-A | 13631875-C-A | ** | ||||||||
15844733-G-A | 13732853-G-A | ** | ||||||||
15449928-C-A | 13338048-C-A | ** | ||||||||
15576788-C-T | 13464908-C-T | ** | ||||||||
15498152-T-G | 13386272-T-G | ** | ||||||||
15498133-A-G | 13386253-A-G | ** | ||||||||
15498115-G-A | 13386235-G-A | ** | ||||||||
15946730-A-G | 13834850-A-G | ** | ||||||||
15498106-A-G | 13386226-A-G | ** | ||||||||
15498101-C-T | 13386221-C-T | ** | ||||||||
15475111-C-A | 13363231-C-A | ** | ||||||||
15689119-A-G | 13577239-A-G | ** | ||||||||
6734706-C-G | 6866665-C-G | ** | ||||||||
15445443-A-G | 13333563-A-G | ** | ||||||||
15445335-C-A | 13333455-C-A | ** | ||||||||
15431764-CT-C | 13319884-CT-C | 8×T | ** | |||||||
16054222-C-A | 13942342-C-A | ** | ||||||||
15411274-C-A | 13299394-C-A | ** | ||||||||
15410559-G-A | 13298679-G-A | FT281940 | ** | |||||||
15396911-T-C | 13285031-T-C | ** | ||||||||
15379347-C-G | 13267467-C-G | ** | ||||||||
15289967-G-T | 13178066-G-T | ** | ||||||||
14911984-C-A | 12800051-C-A | ** | ||||||||
14888039-T-C | 12776105-T-C | ** | ||||||||
14717761-CT-C | 12605829-CT-C | ** | ||||||||
14578036-C-A | 12466236-C-A | ** | ||||||||
14569485-G-T | 12457685-G-T | ** | ||||||||
14558501-C-T | 12446702-C-T | ** | ||||||||
15999895-T-C | 13888015-T-C | ** | ||||||||
16399913-G-A | 14288033-G-A | ** | ||||||||
16070068-G-T | 13958188-G-T | ** | ||||||||
17014614-A-G | 14902734-A-G | ** | ||||||||
17319760-G-T | 15207880-G-T | ** | ||||||||
17285066-C-A | 15173186-C-A | ** | ||||||||
17263239-C-A | 15151359-C-A | ** | ||||||||
17244786-A-T | 15132906-A-T | ** | ||||||||
17203365-C-T | 15091485-C-T | ** | ||||||||
17177048-T-C | 15065168-T-C | ** | ||||||||
17155899-C-A | 15044019-C-A | ** | ||||||||
17153499-C-A | 15041619-C-A | ** | ||||||||
17136950-G-T | 15025070-G-T | ** | ||||||||
17128582-C-G | 15016702-C-G | ** | ||||||||
17098637-T-C | 14986757-T-C | ** | ||||||||
17090773-C-A | 14978893-C-A | ** | ||||||||
16993471-C-A | 14881591-C-A | ** | ||||||||
16090378-C-A | 13978498-C-A | ** | ||||||||
16783377-C-A | 14671497-C-A | ** | ||||||||
16706483-C-A | 14594603-C-A | ** | ||||||||
16705044-G-T | 14593164-G-T | ** | ||||||||
16654703-C-A | 14542823-C-A | ** | ||||||||
16612676-C-A | 14500796-C-A | ** | ||||||||
16467167-C-A | 14355287-C-A | ** | ||||||||
16462801-C-A | 14350921-C-A | ** | ||||||||
16430927-C-A | 14319047-C-A | ** | ||||||||
16430640-C-A | 14318760-C-A | ** | ||||||||
16423671-C-G | 14311791-C-G | ** | ||||||||
14516938-C-A | 12405139-C-A | ** | ||||||||
16399907-C-T | 14288027-C-T | ** | ||||||||
16172137-C-A | 14060257-C-A | ** | ||||||||
14544132-C-A | 12432333-C-A | ** | ||||||||
14278610-G-T | 12157904-G-T | ** | ||||||||
14501485-G-A | 12389690-G-A | ** | ||||||||
10924357-C-A | ** | |||||||||
10978971-C-A | ** | |||||||||
10977534-C-A | ** | |||||||||
10948027-G-T | ** | |||||||||
10945518-T-C | ** | |||||||||
10941422-C-A | ** | |||||||||
10940096-C-A | FT437438 | ** | ||||||||
10935427-C-A | ** | |||||||||
10933514-C-A | ** | |||||||||
10933477-C-A | ** | |||||||||
10924393-AT-A | ** | |||||||||
10924364-C-CTCCAATCGAT | ** | |||||||||
10924359-C-G | ** | |||||||||
10924339-C-G | ** | |||||||||
10987749-C-G | ** | |||||||||
10924321-C-CCGTTG | ** | |||||||||
10924316-C-T | ** | |||||||||
10907965-C-A | ** | |||||||||
10906765-T-A | ** | |||||||||
10902666-G-T | ** | |||||||||
10895584-T-C | ** | |||||||||
10877682-C-A | ** | |||||||||
10876638-C-T | ** | |||||||||
10868214-C-A | ** | |||||||||
10851799-A-G | ** | |||||||||
10841385-T-C | ** | |||||||||
10835161-T-C | ** | |||||||||
10802664-C-T | ** | |||||||||
10985704-C-T | ** | |||||||||
11024533-G-T | ** | |||||||||
14397668-T-A | 12276964-T-A | ** | ||||||||
13919228-C-AA | 11798522-C-AA | ** | ||||||||
14397554-C-A | 12276850-C-A | ** | ||||||||
14391633-T-G | 12270929-T-G | ** | ||||||||
14379980-T-C | 12259276-T-C | ** | ||||||||
17380612-C-A | 15268732-C-A | ** | ||||||||
14233430-C-CA | 12112724-C-CA | ** | ||||||||
14108568-C-A | 11987862-C-A | ** | ||||||||
14051817-T-C | 11931111-T-C | ** | ||||||||
14021307-C-A | 11900601-C-A | ** | ||||||||
13998135-C-A | 11877429-C-A | ** | ||||||||
13994071-A-T | 11873365-A-T | ** | ||||||||
13967100-C-A | 11846394-C-A | ** | ||||||||
13943256-C-A | 11822550-C-A | ** | ||||||||
13919898-C-A | 11799192-C-A | ** | ||||||||
13906279-G-C | 11785573-G-C | ** | ||||||||
13195977-G-T | 11040301-G-T | 4×CATTC | ** | |||||||
13906184-C-T | 11785478-C-T | ** | ||||||||
13906167-C-T | 11785461-C-T | ** | ||||||||
13872023-C-A | 11751317-C-A | ** | ||||||||
11672957-G-T | ** | |||||||||
11667834-G-T | ** | |||||||||
11659736-G-A | ** | |||||||||
13586001-C-A | 11430325-C-A | ** | ||||||||
13583728-C-A | 11428052-C-A | ** | ||||||||
13553257-C-A | 11397581-C-A | ** | ||||||||
13371586-C-G | 11215910-C-G | ** | ||||||||
13317983-C-A | 11162307-C-A | A17120 | ** | |||||||
13216752-C-A | 11061076-C-A | ** | ||||||||
13208120-C-A | 11052444-C-A | ** | ||||||||
17355560-C-A | 15243680-C-A | ** | ||||||||
17785909-G-T | 15674029-G-T | ** | ||||||||
17500654-T-A | 15388774-T-A | ** | ||||||||
26047490-C-T | 23901343-C-T | P1_Y1 | ** | |||||||
28468551-C-A | 26322404-C-A | ** | ||||||||
28085762-C-A | 25939615-C-A | P1_Y2 | ** | |||||||
27829249-CT-C | 25683102-CT-C | P1_Y2 | ** | |||||||
27543203-G-T | 25397056-G-T | P1_Y2 | ** | |||||||
27507459-G-T | 25361312-G-T | P1_Y2 | ** | |||||||
27232137-T-C | 25085990-T-C | P1_g3 | ** | |||||||
26707466-C-A | 24561319-C-A | P1_g2 | ** | |||||||
26386380-G-T | 24240233-G-T | P1_Y1 | ** | |||||||
26386376-A-G | 24240229-A-G | P1_Y1 | ** | |||||||
26100545-G-TTTTTT | 23954398-G-TTTTTT | P1_Y1 | ** | |||||||
26100401-A-G | 23954254-A-G | P1_Y1 | ** | |||||||
26055538-C-A | 23909391-C-A | P1_Y1 | ** | |||||||
25970839-A-T | 23824692-A-T | P1_Y1 | ** | |||||||
28523523-C-A | 26377376-C-A | ** | ||||||||
25647084-G-T | 23500937-G-T | P1_b3 | ** | |||||||
25530345-G-T | 23384198-G-T | P1_gr1 | ** | |||||||
24595398-TG-T | 22449251-TG-T | P3_t2 | ** | |||||||
24518546-A-G | 22372399-A-G | ** | ||||||||
23518578-T-A | 21356692-T-A | ** | ||||||||
23373160-C-A | 21211274-C-A | ** | ||||||||
23137408-C-A | 20975522-C-A | ** | ||||||||
23096513-C-G | 20934627-C-G | ** | ||||||||
23066794-C-A | 20904908-C-A | ** | ||||||||
22949919-C-A | 20788033-C-A | ** | ||||||||
22775361-C-A | 20613475-C-A | ** | ||||||||
22775034-C-A | 20613148-C-A | ** | ||||||||
22215078-C-A | 20053192-C-A | ** | ||||||||
28469334-C-A | 26323187-C-A | ** | ||||||||
28529585-C-A | 26383438-C-A | ** | ||||||||
22204509-G-T | 20042623-G-T | ** | ||||||||
56844384-T-A | ** | |||||||||
23713750-G-GCC | 21551864-G-GCC | ** | ||||||||
19767319-C-T | 17655439-C-T | P5_Prx | ** | |||||||
19689621-T-C | 17577741-T-C | P5_Prx | ** | |||||||
6341204-A-C | 6473163-A-C | IR3_Dst | ** | |||||||
6279812-G-A | 6411771-G-A | IR3_Dst | ** | |||||||
9639196-C-T | 9801587-C-T | IR3_Prx | ** | |||||||
56847704-G-T | ** | |||||||||
56846333-G-T | ** | |||||||||
56844407-G-C | ** | |||||||||
56844398-C-T | ** | |||||||||
56844390-C-T | ** | |||||||||
56844387-A-G | ** | |||||||||
56844378-G-A | ** | |||||||||
28536218-C-A | 26390071-C-A | ** | ||||||||
56844377-T-C | ** | |||||||||
56844373-G-A | ** | |||||||||
56756767-A-T | ** | |||||||||
28776712-A-T | 26630565-A-T | ** | ||||||||
28753905-AG-A | 26607758-AG-A | ** | ||||||||
28730053-AT-A | 26583906-AT-A | ** | ||||||||
28698008-T-C | 26551861-T-C | ** | ||||||||
28674892-C-A | 26528745-C-A | ** | ||||||||
28671050-C-A | 26524903-C-A | ** | ||||||||
28624789-C-A | 26478642-C-A | ** | ||||||||
28613081-C-G | 26466934-C-G | ** | ||||||||
28594283-T-C | 26448136-T-C | ** | ||||||||
28555616-C-A | 26409469-C-A | ** | ||||||||
22205051-T-C | 20043165-T-C | ** | ||||||||
22204358-C-T | 20042472-C-T | ** | ||||||||
17524069-C-G | 15412189-C-G | ** | ||||||||
18987346-C-A | 16875466-C-A | ** | ||||||||
19218243-C-A | 17106363-C-A | ** | ||||||||
19168555-C-A | 17056675-C-A | ** | ||||||||
19161054-C-A | 17049174-C-A | ** | ||||||||
19155148-T-C | 17043268-T-C | ** | ||||||||
19138629-C-A | 17026749-C-A | ** | ||||||||
19138597-A-G | 17026717-A-G | ** | ||||||||
19130738-CTTTT-C | 17018858-CTTTT-C | 33×T | ** | |||||||
19107467-C-A | 16995587-C-A | ** | ||||||||
19009301-C-A | 16897421-C-A | ** | ||||||||
19009268-C-A | 16897388-C-A | ** | ||||||||
18990454-C-A | 16878574-C-A | ** | ||||||||
18987856-G-T | 16875976-G-T | ** | ||||||||
18801316-T-A | 16689436-T-A | ** | ||||||||
19449158-C-A | 17337278-C-A | ** | ||||||||
18779049-C-A | 16667169-C-A | ** | ||||||||
18736255-C-A | 16624375-C-A | ** | ||||||||
18728678-C-A | 16616798-C-A | ** | ||||||||
18703164-C-A | 16591284-C-A | ** | ||||||||
18565312-C-A | 16453432-C-A | ** | ||||||||
18215811-C-A | 16103931-C-A | ** | ||||||||
18138291-C-A | 16026411-C-A | ** | ||||||||
18127882-C-T | 16016002-C-T | ** | ||||||||
17858865-T-C | 15746985-T-C | ** | ||||||||
17843100-T-TTTC | 15731220-T-TTTC | ** | ||||||||
10796818-A-G | ** | |||||||||
17547889-C-A | 15436009-C-A | ** | ||||||||
17535515-G-T | 15423635-G-T | ** | ||||||||
19270534-AT-A | 17158654-AT-A | ** | ||||||||
19464044-G-T | 17352164-G-T | ** | ||||||||
22113545-C-A | 19951659-C-A | ** | ||||||||
21296728-T-A | 19134842-T-A | ** | ||||||||
22088735-C-A | 19926849-C-A | ** | ||||||||
22060433-C-A | 19898547-C-A | ** | ||||||||
21959070-C-T | 19797184-C-T | ** | ||||||||
21914270-G-T | 19752384-G-T | ** | ||||||||
21885978-A-G | 19724092-A-G | ** | ||||||||
21708582-C-T | 19546696-C-T | ** | ||||||||
21708346-C-A | 19546460-C-A | ** | ||||||||
21587726-A-C | 19425840-A-C | ** | ||||||||
21495974-A-G | 19334088-A-G | ** | ||||||||
21427315-G-T | 19265429-G-T | ** | ||||||||
21382513-C-A | 19220627-C-A | ** | ||||||||
21367238-C-A | 19205352-C-A | ** | ||||||||
21346466-T-C | 19184580-T-C | ** | ||||||||
21182389-C-T | 19020503-C-T | ** | ||||||||
19605062-C-T | 17493182-C-T | P5_Prx | ** | |||||||
21177037-C-T | 19015151-C-T | ** | ||||||||
21124846-G-T | 18962960-G-T | ** | ||||||||
21115640-C-A | 18953754-C-A | ** | ||||||||
21096375-C-A | 18934489-C-A | ** | ||||||||
21049089-C-A | 18887203-C-A | ** | ||||||||
21012099-A-G | 18850213-A-G | P4_Dst | ** | |||||||
20972670-T-TA | 18810784-T-TA | P4_Dst | ** | |||||||
20972616-T-G | 18810730-T-G | P4_Dst | ** | |||||||
20755649-C-A | 18593763-C-A | P4_Prx | ** | |||||||
20707734-C-A | 18545848-C-A | P4_Prx | ** | |||||||
19966495-T-A | 17854615-T-A | BY171702 | P5_Prx | ** | ||||||
19844966-C-A | 17733086-C-A | P5_Prx | ** | |||||||
19827401-G-T | 17715521-G-T | P5_Prx | ** | |||||||
10798570-C-A | ** | |||||||||
10900853-C-A | ** | |||||||||
10796802-T-TGTTCCATCAC | ** | |||||||||
3286554-C-A | 3418513-C-A | FT103583 | ** | |||||||
4094495-C-A | 4226454-C-A | ** | ||||||||
4079557-C-A | 4211516-C-A | ** | ||||||||
3994769-T-A | 4126728-T-A | ** | ||||||||
3860583-C-A | 3992542-C-A | ** | ||||||||
3847377-C-A | 3979336-C-A | ** | ||||||||
3751712-G-T | 3883671-G-T | ** | ||||||||
3625853-C-A | 3757812-C-A | ** | ||||||||
3605783-C-A | 3737742-C-A | ** | ||||||||
3596049-G-T | 3728008-G-T | ** | ||||||||
3435023-C-A | 3566982-C-A | ** | ||||||||
3347543-C-A | 3479502-C-A | ** | ||||||||
3287136-C-A | 3419095-C-A | ** | ||||||||
3229099-C-A | 3361058-C-A | ** | ||||||||
4147542-CCCTTT-C | 4279501-CCCTTT-C | ** | ||||||||
3213917-T-G | 3345876-T-G | ** | ||||||||
3213824-C-G | 3345783-C-G | ** | ||||||||
3178889-CT-C | 3310848-CT-C | ** | ||||||||
3165283-C-A | 3297242-C-A | ** | ||||||||
3092083-C-A | 3224042-C-A | ** | ||||||||
3091935-C-G | 3223894-C-G | ** | ||||||||
3082658-C-T | 3214617-C-T | ** | ||||||||
3051202-C-A | 3183161-C-A | ** | ||||||||
3033035-C-A | 3164994-C-A | FT247434 | ** | |||||||
2853621-C-A | 2985580-C-A | ** | ||||||||
2790663-C-A | 2922622-C-A | ** | ||||||||
2773014-C-A | 2904973-C-A | ** | ||||||||
4139087-T-C | 4271046-T-C | ** | ||||||||
4236304-A-T | 4368263-A-T | 9×AT | ** | |||||||
27997643-GAAAA-G | 25851496-GAAAA-G | P1_Y2 | 16×A | ** | ||||||
5017811-C-T | 5149770-C-T | ** | ||||||||
5266713-A-C | 5398672-A-C | ** | ||||||||
5219691-C-A | 5351650-C-A | ** | ||||||||
5213999-C-A | 5345958-C-A | ** | ||||||||
5199668-A-G | 5331627-A-G | ** | ||||||||
5199653-T-G | 5331612-T-G | ** | ||||||||
5190979-C-A | 5322938-C-A | ** | ||||||||
5151334-G-T | 5283293-G-T | ** | ||||||||
5125473-C-A | 5257432-C-A | ** | ||||||||
5107965-T-C | 5239924-T-C | ** | ||||||||
5084042-C-A | 5216001-C-A | ** | ||||||||
5075869-A-G | 5207828-A-G | ** | ||||||||
5070503-T-C | 5202462-T-C | ** | ||||||||
4968251-C-A | 5100210-C-A | ** | ||||||||
4240836-G-T | 4372795-G-T | ** | ||||||||
4908013-C-A | 5039972-C-A | ** | ||||||||
10796680-T-TCCGCA | ** | |||||||||
4835027-G-T | 4966986-G-T | ** | ||||||||
4731356-G-T | 4863315-G-T | ** | ||||||||
4731345-C-T | 4863304-C-T | ** | ||||||||
4648266-C-A | 4780225-C-A | ** | ||||||||
4605475-C-A | 4737434-C-A | ** | ||||||||
4547627-C-A | 4679586-C-A | ** | ||||||||
4293582-C-A | 4425541-C-A | ** | ||||||||
4286057-T-C | 4418016-T-C | ** | ||||||||
4281847-C-A | 4413806-C-A | ** | ||||||||
4240865-A-T | 4372824-A-T | ** | ||||||||
16071796-C-A | 13959916-C-A | ** | ||||||||
17306720-C-A | 15194840-C-A | ** | ||||||||
5340934-C-A | 5472893-C-A | ** | ||||||||
28761382-C-A | 26615235-C-A | 31×A | ** | |||||||
56756774-C-G | ** | |||||||||
56844352-G-T | ** | |||||||||
26047498-A-T | 23901351-A-T | P1_Y1 | ** | |||||||
10746907-C-A | ** | |||||||||
13225720-C-A | 11070044-C-A | ** | ||||||||
10989442-T-A | ** | |||||||||
13974681-C-T | 11853975-C-T | ** | ||||||||
9732928-C-A | 9895319-C-A | IR3_Prx | ** | |||||||
11026044-A-T | ** | |||||||||
24244636-C-T | 22098489-C-T | P3_b1 | ** | |||||||
13216661-C-A | 11060985-C-A | ** | ||||||||
17039083-C-A | 14927203-C-A | ** | ||||||||
13484784-C-A | 11329108-C-A | ** | ||||||||
10023373-C-A | 10185764-C-A | ** | ||||||||
15081270-C-A | 12969360-C-A | ** | ||||||||
26010319-G-C | 23864172-G-C | P1_Y1 | ** | |||||||
22244752-T-C | 20082866-T-C | DYZ19 | *** | ** | ||||||
19448490-G-A | 17336610-G-A | ** | ||||||||
7401179-C-T | 7533138-C-T | ** | ||||||||
5501072-C-A | 5633031-C-A | ** | ||||||||
14352757-C-A | 12232052-C-A | ** | ||||||||
58990529-G-A | 56844382-G-A | ** | ||||||||
2814891-AT-A | 2946850-AT-A | ** | ||||||||
27791977-T-G | 25645830-T-G | P1_Y2 | ** | |||||||
22802905-G-T | 20641019-G-T | ** | ||||||||
13942566-C-A | 11821860-C-A | FGC28987 | FGC28991 | ** | ||||||
56756783-A-T | ** | |||||||||
23041262-C-A | 20879376-C-A | ** | ||||||||
14443096-C-A | 12322369-C-A | ** | ||||||||
7142228-C-A | 7274187-C-A | ** | ||||||||
10657525-A-C | ** | |||||||||
6682075-C-T | 6814034-C-T | ** | ||||||||
10796849-C-T | ** | |||||||||
10796843-A-ATGGCT | ** | |||||||||
5274141-C-A | 5406100-C-A | ** | ||||||||
21182385-C-A | 19020499-C-A | ** | ||||||||
23833065-C-A | 21671179-C-A | ** | ||||||||
10996240-G-T | ** | |||||||||
10746879-A-T | ** | |||||||||
28720170-G-T | 26574023-G-T | ** | ||||||||
17158989-TTTTTTG-T | 15047109-TTTTTTG-T | ** | ||||||||
19042525-C-A | 16930645-C-A | ** | ||||||||
13327760-C-A | 11172084-C-A | ** | ||||||||
14384434-G-T | 12263730-G-T | ** | ||||||||
15870559-C-A | 13758679-C-A | ** | ||||||||
16017743-C-A | 13905863-C-A | ** | ||||||||
14395605-C-A | 12274901-C-A | ** | ||||||||
28755040-C-A | 26608893-C-A | ** | ||||||||
14328356-C-A | 12207650-C-A | ** | ||||||||
28598443-C-A | 26452296-C-A | ** | ||||||||
10987732-T-G | ** | |||||||||
28463931-C-A | 26317784-C-A | ** | ||||||||
8080144-C-A | 8212103-C-A | ** | ||||||||
8058613-C-A | 8190572-C-A | ** | ||||||||
16048899-C-A | 13937019-C-A | ** | ||||||||
15012332-G-T | 12900420-G-T | ** | ||||||||
5266718-A-T | 5398677-A-T | ** | ||||||||
4877001-A-G | 5008960-A-G | ** | ||||||||
5376569-C-A | 5508528-C-A | ** | ||||||||
8901048-C-T | 9033007-C-T | ** | ||||||||
9932837-C-A | 10095228-C-A | ** | ||||||||
9927599-C-A | 10089990-C-A | ** | ||||||||
9913312-C-A | 10075703-C-A | ** | ||||||||
9877948-C-A | 10040339-C-A | ** | ||||||||
9513479-T-A | 9675870-T-A | ** | ||||||||
9511453-G-T | 9673844-G-T | FT20456 | ** | |||||||
9499878-G-T | 9662269-G-T | ** | ||||||||
9402996-T-C | 9565387-T-C | ** | ||||||||
9076906-G-T | 9239297-G-T | ** | ||||||||
8988550-C-A | 9150941-C-A | ** | ||||||||
9056902-C-A | ** | |||||||||
8807165-C-T | 8939124-C-T | ** | ||||||||
10005937-C-A | 10168328-C-A | ** | ||||||||
8761681-C-A | 8893640-C-A | ** | ||||||||
8748568-A-G | 8880527-A-G | ** | ||||||||
8712102-C-A | 8844061-C-A | ** | ||||||||
8343017-C-A | 8474976-C-A | ** | ||||||||
8296771-C-A | 8428730-C-A | ** | ||||||||
8253690-T-G | 8385649-T-G | ** | ||||||||
8154133-C-T | 8286092-C-T | ** | ||||||||
8067375-C-A | 8199334-C-A | ** | ||||||||
7970433-A-T | 8102392-A-T | ** | ||||||||
7964568-C-A | 8096527-C-A | ** | ||||||||
7918185-A-G | 8050144-A-G | ** | ||||||||
7897811-G-T | 8029770-G-T | ** | ||||||||
9983355-C-A | 10145746-C-A | ** | ||||||||
10653542-G-T | ** | |||||||||
7886341-T-G | 8018300-T-G | ** | ||||||||
10755634-TTCATC-T | ** | |||||||||
10796677-C-T | ** | |||||||||
10796666-C-CGTTT | ** | |||||||||
10796662-C-CA | ** | |||||||||
10789305-CATCCCGGTCA-C | ** | |||||||||
10787569-C-A | ** | |||||||||
10786495-C-T | ** | |||||||||
10780764-C-A | ** | |||||||||
10778724-C-A | ** | |||||||||
10773657-C-A | ** | |||||||||
10755659-C-T | ** | |||||||||
10755646-C-G | ** | |||||||||
10755635-T-G | ** | |||||||||
10661072-C-A | ** | |||||||||
10755623-A-C | ** | |||||||||
10755609-A-T | ** | |||||||||
10755600-TTTATT-C | ** | |||||||||
10755596-C-A | ** | |||||||||
10746929-ATTCCATTCTGTT-A | ** | |||||||||
10746894-A-C | ** | |||||||||
10746889-A-AATCCG | ** | |||||||||
10693081-C-T | ** | |||||||||
10683988-C-A | ** | |||||||||
10679126-C-A | ** | |||||||||
10664925-C-T | ** | |||||||||
10664168-C-T | ** | |||||||||
7896569-T-C | 8028528-T-C | ** | ||||||||
8987142-CT-C | 9149533-CT-C | ** | ||||||||
7864054-C-A | 7996013-C-A | ** | ||||||||
6483591-G-T | 6615550-G-T | ** | ||||||||
7108344-C-A | 7240303-C-A | ** | ||||||||
7080739-C-A | 7212698-C-A | ** | ||||||||
7040252-C-A | 7172211-C-A | ** | ||||||||
6971628-C-A | 7103587-C-A | ** | ||||||||
6929358-C-A | 7061317-C-A | ** | ||||||||
7829060-C-A | 7961019-C-A | ** | ||||||||
6892373-C-A | 7024332-C-A | ** | ||||||||
6776221-G-A | 6908180-G-A | ** | ||||||||
6773965-G-A | 6905924-G-A | ** | ||||||||
6732413-C-A | 6864372-C-A | ** | ||||||||
6592381-A-G | 6724340-A-G | ** | ||||||||
6360681-G-T | 6492640-G-T | ** | ||||||||
7172382-G-T | 7304341-G-T | ** | ||||||||
6252363-G-T | 6384322-G-T | IR3_Dst | ** | |||||||
6065848-C-A | 6197807-C-A | ** | ||||||||
6023220-G-T | 6155179-G-T | ** | ||||||||
6012899-G-T | 6144858-G-T | ** | ||||||||
5942890-C-A | 6074849-C-A | ** | ||||||||
5775042-C-A | 5907001-C-A | ** | ||||||||
5501247-C-A | 5633206-C-A | ** | ||||||||
5501238-A-G | 5633197-A-G | ** | ||||||||
5501085-C-A | 5633044-C-A | ** | ||||||||
5449875-G-T | 5581834-G-T | ** | ||||||||
5446069-T-G | 5578028-T-G | ** | ||||||||
7162990-A-C | 7294949-A-C | ** | ||||||||
6925738-C-A | 7057697-C-A | ** | ||||||||
26120186-C-T | 23974039-C-T | P1_Y1 | ** | |||||||
7255268-T-G | 7387227-T-G | ** | ||||||||
7753214-C-A | 7885173-C-A | ** | ||||||||
7721420-T-C | 7853379-T-C | ** | ||||||||
7699304-T-G | 7831263-T-G | ** | ||||||||
7650321-T-G | 7782280-T-G | ** | ||||||||
7645461-C-T | 7777420-C-T | ** | ||||||||
7186255-C-A | 7318214-C-A | ** | ||||||||
7621206-C-G | 7753165-C-G | ** | ||||||||
7578542-C-A | 7710501-C-A | ** | ||||||||
7381812-C-A | 7513771-C-A | ** | ||||||||
7369073-C-A | 7501032-C-A | ** | ||||||||
7643042-C-A | 7775001-C-A | FT228560 | ** | |||||||
7211276-C-A | 7343235-C-A | ** | ||||||||
7217592-C-A | 7349551-C-A | ** | ||||||||
56841010-C-A | *** | |||||||||
9666553-G-T | 9828944-G-T | IR3_Prx | *** | |||||||
56835299-G-T | *** | |||||||||
25047894-C-T | 22901747-C-T | g1 | *** | |||||||
24150109-A-G | 22003962-A-G | P3_b1 | *** | |||||||
24050306-G-A | 21904159-G-A | P3_b1 | *** | |||||||
22453456-A-T | 20291570-A-T | DYZ19 | *** | |||||||
24806739-G-T | 22660592-G-T | P3_b2 | *** | |||||||
22219235-G-A | 20057349-G-A | DYZ19 | *** | |||||||
18345943-A-AATACATAC | 16234063-A-AATACATAC | P6_Prx | 9×ATAC | *** | ||||||
22221486-G-A | 20059600-G-A | DYZ19 | *** | |||||||
19367024-C-G | 17255144-C-G | *** | ||||||||
13258166-GT-G | 11102490-GT-G | 10×T | *** | |||||||
10892675-G-T | *** | |||||||||
10673941-TGCACC-T,TCCATTGCACC | *** | |||||||||
15422098-CAAAA-C,CAA | 13310218-CAAAA-C,CAA | 20×A | *** | |||||||
28805892-G-A | 26659745-G-A | *** | ||||||||
17152628-C-A | 15040748-C-A | *** | ||||||||
3194380-A-AT | 3326339-A-AT | 9×T | *** | |||||||
7142216-C-A | 7274175-C-A | *** | ||||||||
13375888-A-T | 11220212-A-T | *** | ||||||||
13450411-CTCCATTCCATTCCATTCTATTCCAT-C | 11294735-CTCCATTCCATTCCATTCTATTCCAT-C | *** | ||||||||
13478994-C-T | 11323318-C-T | *** | ||||||||
10860611-C-A | *** | |||||||||
10789940-CCCATT-C | *** | |||||||||
16705176-C-A | 14593296-C-A | *** | ||||||||
22245367-A-C | 20083481-A-C | DYZ19 | *** | |||||||
14753933-CAA-C,CAAA | 12642002-CAA-C,CAAA | 12×A | *** | |||||||
13478405-C-A | 11322729-C-A | *** | ||||||||
15060776-G-T | 12948868-G-T | *** | ||||||||
7033618-C-A | 7165577-C-A | *** | ||||||||
10759999-C-A | *** | |||||||||
21472175-TA-T,TAA | 19310289-TA-T,TAA | 14×A | *** | |||||||
10935508-A-T | *** | |||||||||
4302141-C-T | 4434100-C-T | *** | ||||||||
11007662-C-A | *** | |||||||||
11003878-C-A | *** | |||||||||
16930673-T-C | 14818793-T-C | *** | ||||||||
18263658-C-T | 16151778-C-T | *** | ||||||||
19047994-G-C | 16936114-G-C | *** | ||||||||
8913456-G-A | 9045415-G-A | *** | ||||||||
18754944-C-T | 16643064-C-T | *** | ||||||||
18754958-G-T | 16643078-G-T | *** | ||||||||
22017969-C-A | 19856083-C-A | *** | ||||||||
56835004-C-A | *** | |||||||||
10775882-T-C | FT268684 | *** | ||||||||
19143207-C-G | 17031327-C-G | *** | ||||||||
8661645-GA-G | 8793604-GA-G | 8×A | *** | |||||||
10887985-T-TCCACA | *** | |||||||||
5011384-C-A | 5143343-C-A | *** | ||||||||
5011387-A-G | 5143346-A-G | *** | ||||||||
8417505-CTTT-C | 8549464-CTTT-C | 15×T | *** | |||||||
13450411-CTCCATTCCATTCCATTCTATTCCATTCCAT-C,CTCCAT | 11294735-CTCCATTCCATTCCATTCTATTCCATTCCAT-C,CTCCAT | *** | ||||||||
13465418-C-A | 11309742-C-A | *** | ||||||||
18793519-TCAC-T | 16681639-TCAC-T | *** | ||||||||
17504829-C-A | 15392949-C-A | *** | ||||||||
10971935-T-C | *** | |||||||||
10769335-G-T | *** | |||||||||
2979296-CTTTT-C,CTTT | 3111255-CTTTT-C,CTTT | 15×T | *** | |||||||
22113463-C-A | 19951577-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 218512 | 10876451 | 7904632 | 7989262 |
Kit: 218512 | 9936173 | 8067212 | 7942260 |
Kit: 218512 | 14677899 | 9231623 | 8242050 |
Used in age calculations | 14677899 | 9231623 | 8242050 |
Counts of SNPs | 1 | 1 |
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