Wallander
Kane-BY3: B69927, FTDNA: B69927, BigY3: B69927Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | Kane-BY3 B69927 | FTDNA B69927 | BigY3 B69927 |
---|---|---|---|---|---|---|---|---|---|---|
18287490-G-A | 16175610-G-A | P6_Prx | *** | A* | ||||||
22488496-G-T | 20326610-G-T | DYZ19 | + | |||||||
22488497-T-C | 20326611-T-C | DYZ19 | + | |||||||
8571269-T-G | 8703228-T-G | Y64093 | Y | Y | + | + | + | |||
16552136-T-C | 14440256-T-C | Y70110 | Y | Y | + | + | + | |||
22474801-C-G | 20312915-C-G | BY223224 | DYZ19 | + | + | ** | ||||
9596493-ATGTG-A | 9758884-ATGTG-A | IR3_Prx | 12×TG | + | ||||||
22488509-T-A | 20326623-T-A | DYZ19 | + | |||||||
3384590-T-C | 3516549-T-C | + | ** | |||||||
3384592-T-G | 3516551-T-G | + | ** | |||||||
3544500-G-C | 3676459-G-C | FT82524 | + | + | ||||||
5280656-A-C | 5412615-A-C | FT83039 | + | + | ||||||
19063842-C-T | 16951962-C-T | FT83956 | Y | + | + | |||||
22235564-AAAACTTTTAAGTGCTGTAACACTCACCATAAAGGTCTGCAGCTTCATTCTTGAAGTAAGGAAGACCATGAACCTGCCAGAAGGAAGAAATTCTGGAC-A | 20073678-AAAACTTTTAAGTGCTGTAACACTCACCATAAAGGTCTGCAGCTTCATTCTTGAAGTAAGGAAGACCATGAACCTGCCAGAAGGAAGAAATTCTGGAC-A | DYZ19 | + | |||||||
3403268-A-C | 3535227-A-C | + | ||||||||
22272852-G-GAT | 20110966-G-GAT | DYZ19 | + | |||||||
4983890-T-G | 5115849-T-G | + | ||||||||
9205331-C-T | 9367722-C-T | Y | + | |||||||
22272624-C-T | 20110738-C-T | DYZ19 | + | |||||||
22272626-A-C | 20110740-A-C | DYZ19 | + | |||||||
13745426-G-A | 11589750-G-A | * | ||||||||
13266533-A-C | 11110857-A-C | * | ||||||||
13511115-A-T | 11355439-A-T | * | ||||||||
13574421-A-G | 11418745-A-G | * | ||||||||
13574443-A-T | 11418767-A-T | * | ||||||||
13270742-A-G | 11115066-A-G | * | ||||||||
13362816-T-TAAGTC | 11207140-T-TAAGTC | * | ||||||||
13722901-T-A | 11567225-T-A | * | ||||||||
22225182-C-G | 20063296-C-G | DYZ19 | * | |||||||
22279588-G-T | 20117702-G-T | DYZ19 | * | * | ||||||
17109091-AACACAC-A,AACAC | 14997211-AACACAC-A,AACAC | 25×AC | * | |||||||
13471870-G-A | 11316194-G-A | * | ||||||||
13461117-T-A | 11305441-T-A | * | ||||||||
22436911-T-C | 20275025-T-C | DYZ19 | * | |||||||
22359646-G-T | 20197760-G-T | DYZ19 | * | |||||||
13462592-C-T | 11306916-C-T | * | ||||||||
22490658-A-T | 20328772-A-T | DYZ19 | * | |||||||
13484142-C-T | 11328466-C-T | * | ||||||||
14200742-TTAGATAGATAGATAGA-T,TTAGA | 12080036-TTAGATAGATAGATAGA-T,TTAGA | 15×TAGA | * | |||||||
17951299-ATT-A,AT | 15839419-ATT-A,AT | 25×T | * | |||||||
11035773-C-A | * | |||||||||
21346061-ATT-A | 19184175-ATT-A | 12×T | * | |||||||
22490574-A-T | 20328688-A-T | DYZ19 | * | |||||||
18209106-GTAGATAGA-G,GTAGA | 16097226-GTAGATAGA-G,GTAGA | 12×TAGA | * | |||||||
15171226-CTTT-C,CTTTT | 13059312-CTTT-C,CTTTT | 19×T | * | |||||||
3567571-CCTCT-C | 3699530-CCTCT-C | 10×CT | * | |||||||
13711713-AGAATGGAATGGAATG-A | 11556037-AGAATGGAATGGAATG-A | BY33655 | 7×GAATG | * | ||||||
28814925-A-C | 26668778-A-C | * | ||||||||
13470179-A-T | 11314503-A-T | * | ||||||||
9941896-G-GAA | 10104287-G-GAA | 8×A | * | |||||||
28813240-C-G | 26667093-C-G | * | ||||||||
13694839-C-A | 11539163-C-A | * | ||||||||
5040891-GAA-G | 5172850-GAA-G | 10×A | * | |||||||
17787106-CAA-C,CA | 15675226-CAA-C,CA | 19×A | * | |||||||
5035558-TTG-T,TTGTGTG | 5167517-TTG-T,TTGTGTG | 22×TG | * | |||||||
14495831-G-GGT,GGTGT | 12384028-G-GGT,GGTGT | 17×GT | * | |||||||
13462607-C-T | 11306931-C-T | * | ||||||||
13462612-T-C | 11306936-T-C | * | ||||||||
13489675-G-T | 11333999-G-T | * | ||||||||
13489696-C-CA | 11334020-C-CA | * | ||||||||
13489697-GTGCCC-G | 11334021-GTGCCC-G | * | ||||||||
13489705-A-ACATG | 11334029-A-ACATG | * | ||||||||
13462115-CCA-C | 11306439-CCA-C | * | ||||||||
13693685-CCTAGAATGGAATGAA-C | 11538009-CCTAGAATGGAATGAA-C | * | ||||||||
13693717-TGGAAC-T | 11538041-TGGAAC-T | * | ||||||||
13707121-T-G | 11551445-T-G | * | ||||||||
13707133-G-C | 11551457-G-C | * | ||||||||
56871655-A-ATATAT | * | |||||||||
13448238-C-CCAAT | 11292562-C-CCAAT | * | ||||||||
13705480-GGAATGGAATGGAA-G | 11549804-GGAATGGAATGGAA-G | * | ||||||||
10934868-CATTGCATTCCATCCCACTCAACTCA-C | * | |||||||||
13692979-GGAATA-G | 11537303-GGAATA-G | * | ||||||||
56880822-T-A,TTA | * | |||||||||
13489750-G-GCCT | 11334074-G-GCCT | * | ||||||||
22235667-TGAAGGAACAAACTCTGGATATAACAAATTTAAGTGCTGTAACACTCACCGTAAATGTCTGCAGC-T | 20073781-TGAAGGAACAAACTCTGGATATAACAAATTTAAGTGCTGTAACACTCACCGTAAATGTCTGCAGC-T | DYZ19 | * | |||||||
13470178-G-T | 11314502-G-T | * | ||||||||
13476699-C-T | 11321023-C-T | * | ||||||||
9231698-AACACACACACACAC-A,AACACACACACAC | 9394089-AACACACACACACAC-A,AACACACACACAC | 22×AC | * | |||||||
13488844-G-GCC,GCT | 11333168-G-GCC,GCT | * | ||||||||
13489171-C-A | 11333495-C-A | * | ||||||||
16244792-GGTGT-G,G | 14132912-GGTGT-G,G | 16×GT | * | |||||||
13692959-G-A | 11537283-G-A | * | ||||||||
28795779-T-A | 26649632-T-A | * | ||||||||
15752638-C-CCTTCTTCTT,CCTTCTTCTTCTT | 13640758-C-CCTTCTTCTT,CCTTCTTCTTCTT | 25×CTT | * | |||||||
13718573-C-T | 11562897-C-T | * | ||||||||
10763233-T-TTTCATTCCACTCCACTCCATTCCACTCCACTCCATTCCATTCCATTCCACTTCATTCCATTCTATTCCATTACATTCCTTTCCAC,TTTCATTCCACTCCACTCCATTCCACTCCACTCCATTCCATTCCATTCCACTTCATTCCATTCTATTCCATTACATTCCTTTCCAC | * | |||||||||
13451163-T-TCCTCTGCACTCC | 11295487-T-TCCTCTGCACTCC | * | ||||||||
13478450-T-A | 11322774-T-A | * | ||||||||
21361264-TATCCATCC-T,TATCC | 19199378-TATCCATCC-T,TATCC | 11×ATCC | * | |||||||
4483292-A-AT,ATTT | 4615251-A-AT,ATTT | 14×T | * | |||||||
5241786-TACACACACACACAC-T,T | 5373745-TACACACACACACAC-T,T | 16×AC | * | |||||||
6402515-C-T | 6534474-C-T | * | ||||||||
6402522-T-C | 6534481-T-C | * | ||||||||
6402943-CGTAAAATACCGACGTATATAGTATAGGTGTCGTGAAATACCGATGTATATATTATATTCCTAGGTGTCGTAAAATAACGTCATATATATTATATTTGTACGTGTT-C | 6534902-CGTAAAATACCGACGTATATAGTATAGGTGTCGTGAAATACCGATGTATATATTATATTCCTAGGTGTCGTAAAATAACGTCATATATATTATATTTGTACGTGTT-C | * | ||||||||
8739154-A-AAAT,AAATAATAAT | 8871113-A-AAAT,AAATAATAAT | 13×AAT | * | |||||||
9211677-A-G | 9374068-A-G | Y | * | |||||||
9779028-T-C | 9941419-T-C | Y | * | |||||||
13462250-A-AACGTGTCCCCCTCATCCCTTCCCCATCGCCCCCTTCTTCT | 11306574-A-AACGTGTCCCCCTCATCCCTTCCCCATCGCCCCCTTCTTCT | * | ||||||||
13476604-A-T | 11320928-A-T | * | ||||||||
13513926-A-G | 11358250-A-G | * | ||||||||
13545402-G-GAAAGAAAGAAA | 11389726-G-GAAAGAAAGAAA | * | ||||||||
13693738-GGAATGGCATA-G | 11538062-GGAATGGCATA-G | * | ||||||||
13712853-A-G | 11557177-A-G | * | ||||||||
13728484-G-A | 11572808-G-A | * | ||||||||
11652799-AGAATG-A,A | * | |||||||||
18581956-G-GGATA,GGATA | 16470076-G-GGATA,GGATA | 10×GATA | * | |||||||
18804474-AAGAGAGAGAG-A,AAGAGAG | 16692594-AAGAGAGAGAG-A,AAGAGAG | 26×AG | * | |||||||
21229862-G-GT,GTT | 19067976-G-GT,GTT | 12×T | * | |||||||
22225198-CGT-C | 20063312-CGT-C | DYZ19 | * | |||||||
22306889-TGATGTGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGTTCTCTTCAGGAATGAAGCTGCAGACCTTAGCGGTGAGCGTTACAGCACTTAAAGGTTTTATGTCCAGAGTTGTTCCATC-T | 20145003-TGATGTGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGTTCTCTTCAGGAATGAAGCTGCAGACCTTAGCGGTGAGCGTTACAGCACTTAAAGGTTTTATGTCCAGAGTTGTTCCATC-T | DYZ19 | * | |||||||
22508454-T-A | 20346568-T-A | DYZ19 | * | |||||||
22508504-A-G | 20346618-A-G | DYZ19 | * | |||||||
22509302-TTGAGTGTTACAGCACTTACAGGTGTTGTGTCCAGAGTTTGTTCCTTCAGATGTGTCTAGAGTTTCTTCCTTCTTTCAGGTTCGTGGTCTTGCTCACTTCCTTAATGAAGCTGCAGACCTTACCGG-T | 20347416-TTGAGTGTTACAGCACTTACAGGTGTTGTGTCCAGAGTTTGTTCCTTCAGATGTGTCTAGAGTTTCTTCCTTCTTTCAGGTTCGTGGTCTTGCTCACTTCCTTAATGAAGCTGCAGACCTTACCGG-T | DYZ19 | * | |||||||
23672293-T-TGCCCCC,TGCCCCC | 21510407-T-TGCCCCC,TGCCCCC | * | ||||||||
28819186-G-C | 26673039-G-C | * | ||||||||
56850659-A-AC,C | * | |||||||||
24904490-CAA-C | 22758343-CAA-C | g1 | 17×A | ** | ||||||
15178406-C-T | 13066492-C-T | YSC0000175 PF4710 | ** | |||||||
22297599-G-T | 20135713-G-T | DYZ19 | ** | |||||||
27791831-T-TTTCTTC | 25645684-T-TTTCTTC | P1_Y2 | 22×TTC | ** | ||||||
6347777-GGAAA-G | 6479736-GGAAA-G | 9×GAAA | ** | |||||||
22475011-A-G | 20313125-A-G | BY223262 | DYZ19 | ** | ||||||
22272638-C-T | 20110752-C-T | DYZ19 | ** | |||||||
11643718-G-T | ** | |||||||||
13487055-AT-A | 11331379-AT-A | ** | ||||||||
5088451-C-A | 5220410-C-A | 27×T | ** | |||||||
10756736-T-C | ** | |||||||||
7969889-TG-T | 8101848-TG-T | ** | ** | |||||||
21276153-T-C | 19114267-T-C | ** | ||||||||
3432976-A-AAGG | 3564935-A-AAGG | ** | ||||||||
3635719-C-A | 3767678-C-A | ** | ** | |||||||
5207427-C-G | 5339386-C-G | ** | ||||||||
5207432-G-A | 5339391-G-A | FTB16535 | ** | |||||||
6446332-T-A | 6578291-T-A | ** | ** | |||||||
19326024-A-G | 17214144-A-G | ** | ** | |||||||
20489537-T-C | 18327651-T-C | P5_Dst | ** | *** | ||||||
23105858-AATAT-A | 20943972-AATAT-A | ** | ||||||||
25593490-G-T | 23447343-G-T | P1_gr1 | ** | |||||||
16168-T-G | ** | |||||||||
18779-T-A | ** | |||||||||
9063398-G-A | 9225789-G-A | ** | ||||||||
9916090-C-G | 10078481-C-G | ** | ||||||||
11021449-C-T | ** | |||||||||
11021450-T-A | ** | |||||||||
56724092-A-G | ** | |||||||||
10077003-T-C | 10239394-T-C | ** | ||||||||
9063385-T-A | 9225776-T-A | ** | ||||||||
9063388-C-A | 9225779-C-A | ** | ||||||||
9063404-T-C | 9225795-T-C | ** | ||||||||
9063405-G-A | 9225796-G-A | ** | ||||||||
7023492-T-A | 7155451-T-A | ** | ||||||||
8174255-A-G | 8306214-A-G | ** | ||||||||
9300561-A-G | 9462952-A-G | ** | ||||||||
14302593-A-G | 12181887-A-G | ** | ||||||||
22272627-A-C | 20110741-A-C | DYZ19 | ** | |||||||
22272632-A-G | 20110746-A-G | DYZ19 | ** | |||||||
22272636-T-G | 20110750-T-G | DYZ19 | ** | |||||||
26715370-C-T | 24569223-C-T | P1_g2 | ** | |||||||
13473724-T-A | 11318048-T-A | *** | ||||||||
13869654-G-T | 11748948-G-T | *** | ||||||||
9340868-A-T | 9503259-A-T | *** | ||||||||
22446004-T-A | 20284118-T-A | DYZ19 | *** | |||||||
13480941-C-T | 11325265-C-T | *** | ||||||||
13255692-C-G | 11100016-C-G | FGC49061 | *** | |||||||
28786357-T-G | 26640210-T-G | *** | ||||||||
22751997-AGTGT-A | 20590111-AGTGT-A | 13×GT | *** | |||||||
13699369-T-A | 11543693-T-A | *** | ||||||||
7490245-T-C | 7622204-T-C | FGC28982 Z26350 | IR1_L | *** | ||||||
13400069-C-T | 11244393-C-T | *** | ||||||||
13574524-T-C | 11418848-T-C | *** | ||||||||
59002708-A-G | 56856561-A-G | *** | ||||||||
13255665-C-T | 11099989-C-T | *** | ||||||||
13255676-C-T | 11100000-C-T | *** | ||||||||
13255687-C-T | 11100011-C-T | *** | ||||||||
13462543-T-C | 11306867-T-C | *** | ||||||||
13462546-C-CCT | 11306870-C-CCT | *** | ||||||||
9804915-G-A | 9967306-G-A | *** | ||||||||
28788012-G-C | 26641865-G-C | *** | ||||||||
5007711-A-AT | 5139670-A-AT | *** | ||||||||
13484395-C-T | 11328719-C-T | *** | ||||||||
13641531-C-T | 11485855-C-T | *** | ||||||||
13641547-C-A | 11485871-C-A | *** | ||||||||
19112200-AAC-A | 17000320-AAC-A | *** | ||||||||
21729939-TTC-T | 19568053-TTC-T | *** | ||||||||
22225210-G-C | 20063324-G-C | DYZ19 | *** | |||||||
13442672-G-A | 11286996-G-A | FT443698 | *** | |||||||
19609552-G-GA | 17497672-G-GA | P5_Prx | 9×A | *** | ||||||
22503071-A-G | 20341185-A-G | DYZ19 | *** | |||||||
22232203-C-T | 20070317-C-T | DYZ19 | *** | |||||||
27482837-ATT-A | 25336690-ATT-A | P1_Y2 | 16×T | *** | ||||||
58848153-T-C | 56742718-A-G | *** | ||||||||
13479083-C-T | 11323407-C-T | *** | ||||||||
4005057-GTT-G | 4137016-GTT-G | 13×T | *** | |||||||
6273852-CCACA-C | 6405811-CCACA-C | IR3_Dst | 12×CA | *** | ||||||
22244110-A-C | 20082224-A-C | DYZ19 | *** | |||||||
22269010-T-A | 20107124-T-A | DYZ19 | *** | |||||||
22306888-G-T | 20145002-G-T | DYZ19 | *** | |||||||
22306889-T-A | 20145003-T-A | DYZ19 | *** | |||||||
22455981-C-A | 20294095-C-A | DYZ19 | *** | |||||||
25220278-G-C | 23074131-G-C | P2_r1 | *** | |||||||
22446008-A-G | 20284122-A-G | DYZ19 | *** | |||||||
13466545-C-T | 11310869-C-T | *** | ||||||||
8377909-TACACACACAC-T | 8509868-TACACACACAC-T | 16×AC | *** | |||||||
58884154-A-G | 56706717-T-C | *** | ||||||||
13729029-G-C | 11573353-G-C | *** | ||||||||
22436921-G-T | 20275035-G-T | FT364042 | DYZ19 | *** | ||||||
13480847-C-G | 11325171-C-G | *** | ||||||||
6040928-CAA-C | 6172887-CAA-C | 12×A | *** | |||||||
13349771-G-A | 11194095-G-A | *** | ||||||||
22489902-T-C | 20328016-T-C | DYZ19 | *** | |||||||
13378637-T-C | 11222961-T-C | *** | ||||||||
5371726-CGT-C | 5503685-CGT-C | 10×GT | *** | |||||||
11021436-C-A | *** | |||||||||
19187385-A-ATT | 17075505-A-ATT | 28×T | *** | |||||||
13472203-CAG-C | 11316527-CAG-C | *** | ||||||||
8073153-A-G | 8205112-A-G | *** | ||||||||
13461104-G-T | 11305428-G-T | *** | ||||||||
4049605-CTT-C | 4181564-CTT-C | 11×T | *** | |||||||
10893614-C-A | *** | |||||||||
5933233-CAAAA-C | 6065192-CAAAA-C | 18×A | *** | |||||||
13485517-T-A | 11329841-T-A | *** | ||||||||
15677933-CA-C,CAA | 13566053-CA-C,CAA | 21×A | *** | |||||||
13464432-C-T | 11308756-C-T | *** | ||||||||
13473745-G-A | 11318069-G-A | *** | ||||||||
4869617-CT-C | 5001576-CT-C | 10×T | *** | |||||||
58848176-A-C | 56742695-T-G | *** | ||||||||
13465985-A-C | 11310309-A-C | *** | ||||||||
19183516-A-ATT | 17071636-A-ATT | 13×T | *** | |||||||
56862005-G-C | *** | |||||||||
13254032-T-G | 11098356-T-G | *** | ||||||||
5035863-G-GA | 5167822-G-GA | 9×A | *** | |||||||
3529572-CTTT-C | 3661531-CTTT-C | 13×T | *** | |||||||
2827909-CTTTT-C | 2959868-CTTTT-C | 17×T | *** | |||||||
22940686-G-GT | 20778800-G-GT | 10×T | *** | |||||||
13484907-C-A | 11329231-C-A | *** | ||||||||
4765550-A-AT | 4897509-A-AT | 10×T | *** | |||||||
13705675-C-A | 11549999-C-A | *** | ||||||||
13718094-G-A | 11562418-G-A | *** | ||||||||
13723047-C-G | 11567371-C-G | *** | ||||||||
56685665-C-G | *** | |||||||||
13489738-C-A | 11334062-C-A | *** | ||||||||
3466432-AT-A | 3598391-AT-A | 10×T | *** | |||||||
22191400-T-TA | 20029514-T-TA | 9×A | *** | |||||||
9973280-G-GT | 10135671-G-GT | 9×T | *** | |||||||
13468048-T-C | 11312372-T-C | *** | ||||||||
13488813-C-A | 11333137-C-A | *** | ||||||||
13484949-C-G | 11329273-C-G | *** | ||||||||
8658407-C-A | 8790366-C-A | *** | ||||||||
14552175-T-TAA | 12440376-T-TAA | 13×A | *** | |||||||
11021434-C-T | *** | |||||||||
22490512-G-C | 20328626-G-C | DYZ19 | *** | |||||||
22936288-CTT-C,CT | 20774402-CTT-C,CT | 25×T | *** | |||||||
10776038-T-TG | *** | |||||||||
10776039-C-CAACG | *** | |||||||||
17528877-CA-C,CAA | 15416997-CA-C,CAA | 12×A | *** | |||||||
13448744-C-T | 11293068-C-T | *** | ||||||||
13357129-G-A | 11201453-G-A | *** | ||||||||
18908014-ACG-A | 16796134-ACG-A | *** | ||||||||
13469136-G-A | 11313460-G-A | *** | ||||||||
22138066-C-CTT | 19976180-C-CTT | 13×T | *** | |||||||
10946624-C-T | *** | |||||||||
9327732-T-TTG | 9490123-T-TTG | 12×TG | *** | |||||||
19121920-CT-C,CTT | 17010040-CT-C,CTT | 17×T | *** | |||||||
22164376-CAAA-C,CAA | 20002490-CAAA-C,CAA | 22×A | *** | |||||||
3403261-CAAAAAA-C,CAA | 3535220-CAAAAAA-C,CAA | 30×A | *** | |||||||
13436739-G-C | 11281063-G-C | *** | ||||||||
13446264-C-T | 11290588-C-T | *** | ||||||||
13484205-C-T | 11328529-C-T | *** | ||||||||
13484895-C-G | 11329219-C-G | *** | ||||||||
13484940-C-T | 11329264-C-T | *** | ||||||||
13508326-A-AGC | 11352650-A-AGC | *** | ||||||||
28585761-G-A | 26439614-G-A | *** | ||||||||
13518365-C-T | 11362689-C-T | *** | ||||||||
22484060-T-G | 20322174-T-G | DYZ19 | *** | |||||||
16938218-CT-C,CTT | 14826338-CT-C,CTT | 19×T | *** | |||||||
20816924-CA-C,CAAA | 18655038-CA-C,CAAA | P4_Gap | 22×A | *** | ||||||
13257291-T-A | 11101615-T-A | *** | ||||||||
13477196-C-A | 11321520-C-A | *** | ||||||||
13478526-G-T | 11322850-G-T | *** | ||||||||
13478527-G-T | 11322851-G-T | *** | ||||||||
13353684-A-G | 11198008-A-G | *** | ||||||||
56697160-C-T | *** | |||||||||
13463307-T-C | 11307631-T-C | *** | ||||||||
13401309-A-C | 11245633-A-C | *** | ||||||||
13628212-G-A | 11472536-G-A | *** | ||||||||
9995896-T-A | 10158287-T-A | *** | ||||||||
10802080-C-G | *** | |||||||||
10802091-C-A | *** | |||||||||
13475405-G-A | 11319729-G-A | *** | ||||||||
8020221-CAA-C,CA | 8152180-CAA-C,CA | 22×A | *** | |||||||
5683719-T-C | 5815678-T-C | *** | ||||||||
7240453-T-A | 7372412-T-A | *** | ||||||||
7240460-T-A | 7372419-T-A | *** | ||||||||
5756916-G-GTA | 5888875-G-GTA | 8×TA | *** | |||||||
13345169-T-G | 11189493-T-G | *** | ||||||||
18712393-T-A | 16600513-T-A | *** | ||||||||
2861534-CAA-C,CA | 2993493-CAA-C,CA | 25×A | *** | |||||||
13241551-C-T | 11085875-C-T | *** | ||||||||
13583552-T-C | 11427876-T-C | *** | ||||||||
24107663-CA-C | 21961516-CA-C | P3_b1 | 18×A | *** | ||||||
13347447-C-T | 11191771-C-T | *** | ||||||||
13618705-T-TA | 11463029-T-TA | 10×A | *** | |||||||
3460735-T-C | 3592694-T-C | *** | *** | |||||||
4555435-T-A | 4687394-T-A | *** | *** | |||||||
5895055-T-C | 6027014-T-C | *** | *** | |||||||
17064808-T-G | 14952928-T-G | *** | *** | |||||||
18712392-T-A | 16600512-T-A | *** | ||||||||
19529387-A-G | 17417507-A-G | *** | *** | |||||||
19529423-T-C | 17417543-T-C | *** | *** | |||||||
9804888-A-C | 9967279-A-C | *** | ||||||||
13390134-C-T | 11234458-C-T | *** | ||||||||
13470444-TCTGC-T | 11314768-TCTGC-T | *** | ||||||||
13462563-G-T | 11306887-G-T | *** | ||||||||
13476656-G-C | 11320980-G-C | *** | ||||||||
13482083-T-A | 11326407-T-A | *** | ||||||||
6043970-CTTTT-C,CTTT | 6175929-CTTTT-C,CTTT | 22×T | *** | |||||||
5493431-CTTTT-C,CTTT | 5625390-CTTTT-C,CTTT | 24×T | *** | |||||||
13461916-C-T | 11306240-C-T | *** | ||||||||
2729648-CTTTTT-C,CTTT | 2861607-CTTTTT-C,CTTT | 25×T | *** | |||||||
7139391-A-AAT | 7271350-A-AAT | *** | ||||||||
13486017-A-G | 11330341-A-G | *** | ||||||||
13691419-T-A | 11535743-T-A | BY88676 | *** | |||||||
13474453-T-A | 11318777-T-A | *** | ||||||||
13474463-G-A | 11318787-G-A | *** | ||||||||
13476589-A-G | 11320913-A-G | *** | ||||||||
13484960-C-T | 11329284-C-T | *** | ||||||||
15468678-CA-C,CAA | 13356798-CA-C,CAA | 23×A | *** | |||||||
11021427-C-CATT | *** | |||||||||
11021429-C-CATTCTGT | *** | |||||||||
13489224-G-T | 11333548-G-T | *** | ||||||||
9933036-C-T | 10095427-C-T | *** | ||||||||
13474747-A-G | 11319071-A-G | *** | ||||||||
13436740-TTA-T | 11281064-TTA-T | *** | ||||||||
9946276-G-C | 10108667-G-C | *** | ||||||||
10965251-T-C | *** | |||||||||
10965253-G-C | *** | |||||||||
13464507-T-C | 11308831-T-C | *** | ||||||||
13473730-C-T | 11318054-C-T | *** | ||||||||
13473742-C-T | 11318066-C-T | *** | ||||||||
13699374-T-C | 11543698-T-C | *** | ||||||||
13699376-G-T | 11543700-G-T | *** | ||||||||
13471557-TCA-T | 11315881-TCA-T | *** | ||||||||
22270475-G-T | 20108589-G-T | DYZ19 | *** | |||||||
17592345-CT-C,CTT | 15480465-CT-C,CTT | 24×T | *** | |||||||
16598677-GAAAA-G | 14486797-GAAAA-G | 19×A | *** | |||||||
22868596-C-CAA | 20706710-C-CAA | 10×A | *** | |||||||
13487927-G-A | 11332251-G-A | *** | ||||||||
13469061-C-T | 11313385-C-T | *** | ||||||||
13484908-T-A | 11329232-T-A | *** | ||||||||
22235734-CATTCTTGAAGCTAGCAAGACCATGAACCTGCCAGAAGGAAGAAACTCTGGACACATCTGAAGGAACAAACTCTGGACATAATACCTTTA-C | 20073848-CATTCTTGAAGCTAGCAAGACCATGAACCTGCCAGAAGGAAGAAACTCTGGACACATCTGAAGGAACAAACTCTGGACATAATACCTTTA-C | DYZ19 | *** | |||||||
22238377-ACC-A | 20076491-ACC-A | DYZ19 | *** | |||||||
13460590-G-A | 11304914-G-A | *** | ||||||||
13462029-C-A | 11306353-C-A | *** | ||||||||
13476623-T-A | 11320947-T-A | *** | ||||||||
13476682-C-G | 11321006-C-G | *** | ||||||||
13483899-A-G | 11328223-A-G | *** | ||||||||
22512604-G-A | 20350718-G-A | DYZ19 | *** | |||||||
13469157-ACATCACCTGGGTGATCAGTGCAGAGATATGTCACAATGCCTCCATAGGCAAATCCAAGTTGAGATTCTGTCACCTGTGTGATCAGTGCAGACATATGTGACCATGCCCCCAGTAGGCAGAGCCTAGAGAATAGTCC-A | 11313481-ACATCACCTGGGTGATCAGTGCAGAGATATGTCACAATGCCTCCATAGGCAAATCCAAGTTGAGATTCTGTCACCTGTGTGATCAGTGCAGACATATGTGACCATGCCCCCAGTAGGCAGAGCCTAGAGAATAGTCC-A | *** | ||||||||
13489384-G-T | 11333708-G-T | *** | ||||||||
8888375-C-CTT | 9020334-C-CTT | 25×T | *** | |||||||
13470152-TCC-T | 11314476-TCC-T | *** | ||||||||
13476456-T-C | 11320780-T-C | *** | ||||||||
13420097-A-G | 11264421-A-G | *** | ||||||||
13479136-T-G | 11323460-T-G | *** | ||||||||
13435739-T-A | 11280063-T-A | *** | ||||||||
13461943-C-T | 11306267-C-T | *** | ||||||||
8470549-C-CAAA | 8602508-C-CAAA | 22×A | *** | |||||||
56879095-A-G | *** | |||||||||
56879097-A-C | *** | |||||||||
13482039-C-T | 11326363-C-T | *** | ||||||||
17387296-A-G,G | 15275416-A-G,G | *** | ||||||||
13476736-G-C | 11321060-G-C | *** | ||||||||
13461996-G-C | 11306320-G-C | *** | ||||||||
3371923-A-G | 3503882-A-G | *** | ||||||||
22510714-T-A | 20348828-T-A | DYZ19 | *** | |||||||
13462541-G-T | 11306865-G-T | *** | ||||||||
13462545-G-A | 11306869-G-A | *** | ||||||||
13487910-A-G | 11332234-A-G | *** | ||||||||
56850656-G-GT | *** | |||||||||
13471770-G-A | 11316094-G-A | *** | ||||||||
13471772-G-T | 11316096-G-T | *** | ||||||||
5310049-C-T | 5442008-C-T | *** | ||||||||
13470156-A-T | 11314480-A-T | *** | ||||||||
22270035-C-T | 20108149-C-T | DYZ19 | *** | |||||||
13461961-C-G | 11306285-C-G | *** | ||||||||
16515611-G-GA | 14403731-G-GA | 9×A | *** | |||||||
22270440-A-C | 20108554-A-C | DYZ19 | *** | |||||||
3130530-CT-C | 3262489-CT-C | 9×T | *** | |||||||
3132845-C-CA | 3264804-C-CA | *** | ||||||||
3349229-CA-C,CAA | 3481188-CA-C,CAA | 22×A | *** | |||||||
3511864-T-C | 3643823-T-C | *** | ||||||||
3965571-T-TA | 4097530-T-TA | *** | ||||||||
4163023-CTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCCTCTTTCCATGG-C | 4294982-CTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCCTCTTTCCATGG-C | *** | ||||||||
4332094-G-C | 4464053-G-C | *** | ||||||||
4427213-C-T | 4559172-C-T | *** | ||||||||
4573079-C-CTT | 4705038-C-CTT | 9×T | *** | |||||||
4693189-A-G | 4825148-A-G | *** | ||||||||
4693190-G-A | 4825149-G-A | *** | ||||||||
4725518-TC-T | 4857477-TC-T | *** | ||||||||
4725525-G-T | 4857484-G-T | *** | ||||||||
4725527-A-T | 4857486-A-T | *** | ||||||||
4725531-T-A | 4857490-T-A | *** | ||||||||
4952087-CT-C | 5084046-CT-C | *** | ||||||||
5223046-CATG-C | 5355005-CATG-C | *** | ||||||||
5264161-T-G | 5396120-T-G | *** | ||||||||
5493896-T-G | 5625855-T-G | *** | ||||||||
5784371-A-G | 5916330-A-G | *** | ||||||||
5814488-G-GAAAA | 5946447-G-GAAAA | 18×A | *** | |||||||
6017736-T-A | 6149695-T-A | *** | ||||||||
6183331-G-A | 6315290-G-A | BY59410 | IR3_Dst | *** | ||||||
6346217-C-T | 6478176-C-T | *** | ||||||||
6700887-T-C | 6832846-T-C | *** | ||||||||
6776497-CAAAA-C,CAAAAA | 6908456-CAAAA-C,CAAAAA | 28×A | *** | |||||||
7179734-GTT-G,GTTTT | 7311693-GTT-G,GTTTT | 25×T | *** | |||||||
7240444-TCTA-T | 7372403-TCTA-T | *** | ||||||||
7513147-A-G | 7645106-A-G | *** | ||||||||
8776547-CTT-C,CTTT | 8908506-CTT-C,CTTT | 24×T | *** | |||||||
9180974-G-A | 9343365-G-A | *** | ||||||||
9363321-G-A | 9525712-G-A | *** | ||||||||
9410922-T-C | 9573313-T-C | *** | ||||||||
9507982-CT-C,CTT | 9670373-CT-C,CTT | 34×T | *** | |||||||
9697146-TTGTGTGTG-T | 9859537-TTGTGTGTG-T | IR3_Prx | 18×TG | *** | ||||||
9941159-A-T | 10103550-A-T | *** | ||||||||
9962555-A-T | 10124946-A-T | *** | ||||||||
10031161-A-G | 10193552-A-G | *** | ||||||||
10654159-T-C | *** | |||||||||
10756861-AC-A | *** | |||||||||
10756863-TCCACTCCACTCCAA-T | *** | |||||||||
10756893-T-A | *** | |||||||||
10776056-A-ATGCCT | *** | |||||||||
10818751-C-G | *** | |||||||||
10921504-T-TTCCATTACATTCTGTCCCATTAGATTCCATTCCATACCACACCACTCCAGTCCACTCCACTCCATTCCATTCCATA | *** | |||||||||
10921524-T-TCCATCCCATC | *** | |||||||||
10984541-A-ATTTCT | *** | |||||||||
13223187-A-G | 11067511-A-G | *** | ||||||||
13275153-C-CTT | 11119477-C-CTT | 11×T | *** | |||||||
13283899-C-G | 11128223-C-G | *** | ||||||||
13348698-CT-C | 11193022-CT-C | *** | ||||||||
13354858-T-TAA | 11199182-T-TAA | 14×A | *** | |||||||
13429119-GTC-G | 11273443-GTC-G | *** | ||||||||
13429472-G-A | 11273796-G-A | *** | ||||||||
13448738-C-T | 11293062-C-T | *** | ||||||||
13458660-C-A | 11302984-C-A | *** | ||||||||
13458665-C-A | 11302989-C-A | *** | ||||||||
13461124-GCCACTATAGGTAGAGCCTAGAAAAGATTTACATGACCTAGGTGATCAGTGCAGAGATACATCGCAATGCCCCTGTAGGCAGGGCCTTGACAAGTGGTATATCACCTGGGTGATCATTGCAGGGATATGTCACAAAGCACCCAGTAGGCAGATCCTAGAGAAGAGTTATATCACCTGGGTGATCAGTGCAGAGATATGTCACAAGC-G | 11305448-GCCACTATAGGTAGAGCCTAGAAAAGATTTACATGACCTAGGTGATCAGTGCAGAGATACATCGCAATGCCCCTGTAGGCAGGGCCTTGACAAGTGGTATATCACCTGGGTGATCATTGCAGGGATATGTCACAAAGCACCCAGTAGGCAGATCCTAGAGAAGAGTTATATCACCTGGGTGATCAGTGCAGAGATATGTCACAAGC-G | *** | ||||||||
13461962-C-G | 11306286-C-G | *** | ||||||||
13462097-C-T | 11306421-C-T | *** | ||||||||
13462132-C-T | 11306456-C-T | *** | ||||||||
13472207-C-CCT | 11316531-C-CCT | *** | ||||||||
13477207-A-C | 11321531-A-C | *** | ||||||||
13477293-GCAA-G | 11321617-GCAA-G | *** | ||||||||
13478515-G-A | 11322839-G-A | *** | ||||||||
13479165-G-C | 11323489-G-C | *** | ||||||||
13479170-A-G | 11323494-A-G | *** | ||||||||
13479527-A-C | 11323851-A-C | *** | ||||||||
13480978-T-A | 11325302-T-A | *** | ||||||||
13481010-C-A | 11325334-C-A | *** | ||||||||
13482038-C-T | 11326362-C-T | *** | ||||||||
13482060-T-C | 11326384-T-C | *** | ||||||||
13482107-T-A | 11326431-T-A | *** | ||||||||
13484396-C-G | 11328720-C-G | *** | ||||||||
13484401-T-C | 11328725-T-C | *** | ||||||||
13484411-C-T | 11328735-C-T | *** | ||||||||
13486047-G-T | 11330371-G-T | *** | ||||||||
13489388-T-TCACC | 11333712-T-TCACC | *** | ||||||||
13489861-G-T | 11334185-G-T | *** | ||||||||
13500085-C-T | 11344409-C-T | *** | ||||||||
13500130-G-GA | 11344454-G-GA | *** | ||||||||
13688645-GGAATGCAATGCTATTTAATC-G | 11532969-GGAATGCAATGCTATTTAATC-G | *** | ||||||||
13696853-T-TGGAAC | 11541177-T-TGGAAC | *** | ||||||||
13699390-C-CGATCA | 11543714-C-CGATCA | *** | ||||||||
13702091-A-G | 11546415-A-G | *** | ||||||||
14062010-CAAA-C,CAA | 11941304-CAAA-C,CAA | 34×A | *** | |||||||
14163647-G-A | 12042941-G-A | *** | ||||||||
14677010-A-C | 12565076-A-C | *** | ||||||||
14682798-A-G | 12570864-A-G | *** | ||||||||
15007104-T-TAAA | 12895189-T-TAAA | 11×A | *** | |||||||
15044803-G-A | 12932893-G-A | *** | ||||||||
15044809-G-A | 12932899-G-A | *** | ||||||||
15422688-G-A | 13310808-G-A | *** | ||||||||
15928329-T-A | 13816449-T-A | *** | ||||||||
15943887-G-A | 13832007-G-A | *** | ||||||||
16401939-C-T | 14290059-C-T | *** | ||||||||
17065614-CA-C | 14953734-CA-C | *** | ||||||||
17785263-C-G | 15673383-C-G | *** | ||||||||
17785266-C-T | 15673386-C-T | *** | ||||||||
17785271-G-T | 15673391-G-T | *** | ||||||||
17919880-ACAG-A | 15808000-ACAG-A | *** | ||||||||
18019832-CTTTTTT-C,CTTTT | 15907952-CTTTTTT-C,CTTTT | 22×T | *** | |||||||
18672418-T-G | 16560538-T-G | *** | ||||||||
20006096-A-G | 17894216-A-G | P5_Prx | *** | |||||||
21197990-C-T | 19036104-C-T | *** | ||||||||
21354485-T-C | 19192599-T-C | *** | ||||||||
21574512-CA-C | 19412626-CA-C | *** | ||||||||
21795711-G-A | 19633825-G-A | *** | ||||||||
22225201-A-ACT | 20063315-A-ACT | DYZ19 | *** | |||||||
22225206-A-C | 20063320-A-C | DYZ19 | *** | |||||||
22225208-T-G | 20063322-T-G | BY213086 | DYZ19 | *** | ||||||
22237171-G-T | 20075285-G-T | DYZ19 | *** | |||||||
22237172-G-T | 20075286-G-T | DYZ19 | *** | |||||||
22237711-C-G | 20075825-C-G | DYZ19 | *** | |||||||
22259287-T-C | 20097401-T-C | DYZ19 | *** | |||||||
22446012-T-G | 20284126-T-G | DYZ19 | *** | |||||||
22508543-AC-A | 20346657-AC-A | DYZ19 | *** | |||||||
22510668-A-T | 20348782-A-T | DYZ19 | *** | |||||||
23070772-C-CTTT | 20908886-C-CTTT | 29×T | *** | |||||||
24600395-C-T | 22454248-C-T | P3_t2 | *** | |||||||
27255138-A-G | 25108991-A-G | P1_g3 | *** | |||||||
27861040-GTT-G | 25714893-GTT-G | P1_Y2 | 17×T | *** | ||||||
28802745-ATTCAAATT-A | 26656598-ATTCAAATT-A | *** | ||||||||
28802754-GCA-G | 26656607-GCA-G | *** | ||||||||
28802758-A-G | 26656611-A-G | *** | ||||||||
28802761-A-G | 26656614-A-G | *** | ||||||||
56731996-A-AATGGAATGGG | *** | |||||||||
56732046-A-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.