Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z198 > Z46513 > ZS312 > Z262 > M167 > Z264 > Z205 > ~22224168-A-C > Z206/S235 > Z208/S362 > Z207/S251 > CTS9762 > CTS4299 > BY12112 > BY12107

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
339740
BigY3
339740
BigY2
339740
16108751-C-CTTTCT 13996871-C-CTTTCT P8_Prx 6×TTTCT***A*
3595304-C-T 3727263-C-T A*
13458690-C-T 11303014-C-T A*
22234157-C-T 20072271-C-T BY50457 DYZ19 ***A*+
26164714-A-G 24018567-A-G P1_Y1 ***A*A*
28817796-A-G 26671649-A-G A*A*
13489891-T-A 11334215-T-A A*
13687277-C-A 11531601-C-A DYZ17 A*A*
22276841-G-A 20114955-G-A DYZ19 A*A*
28817036-G-T 26670889-G-T A*A*
6232458-A-G 6364417-A-G IR3_Dst A*
13447959-T-C 11292283-T-C A*
13450038-C-T 11294362-C-T A*
13450704-A-G 11295028-A-G A*
20622519-CA-C 18460633-CA-C P4_Prx 17×A+
8982048-T-C 9144439-T-C FGC42640ZS4529 Y+
2810005-A-G 2941964-A-G FGC8050 YY+++
6371397-G-A 6503356-G-A BY59873 +++
6513185-T-C 6645144-T-C Y60702 +++
6797164-C-T 6929123-C-T Y60981 YY+++
7013966-A-T 7145925-A-T Y61380 YY+++
9123061-T-G 9285452-T-G BY78310 Y+++
13686168-A-C 11530492-A-C BY45724 DYZ17 +++
14970398-C-T 12858473-C-T Y30692 YY+++
18698833-C-T 16586953-C-T Y73893 YY+++
21286172-G-T 19124286-G-T Y76135 BY33796 YY+++
22029030-C-T 19867144-C-T Y77629 YY+++
22187210-A-G 20025324-A-G Y77915 YY+++
22263020-AC-A 20101134-AC-A DYZ19 +**+
22974032-CT-C 20812146-CT-C +++
23232032-G-T 21070146-G-T Y79496 Y+++
23281087-G-A 21119201-G-A Y79614 YY+++
23334058-C-T 21172172-C-T BY33806 Y79708 YY+++
28745938-G-A 26599791-G-A BZ1228 Y+++
9087679-G-GA 9250070-G-GA +++
9499602-TA-T 9661993-TA-T +**
4644439-T-C 4776398-T-C FT82867 +
5314932-G-A 5446891-G-A FT426210 +
6468341-A-C 6600300-A-C FT83304 +
8371484-T-A 8503443-T-A FT83436 Y+
10617388-A-G +
10950082-G-A FT437826 +
13950807-C-T 11830101-C-T FT83551 Y+
21368445-A-C 19206559-A-C FT84006 YY+
21678457-C-A 19516571-C-A FT84033 Y+
58968173-A-G 56822026-A-G *
13490064-A-G 11334388-A-G *****
22275908-TC-T 20114022-TC-T DYZ19 ****
22279106-G-T 20117220-G-T DYZ19 ****
18462580-TACACAC-T 16350700-TACACAC-T P6_Dst 20×AC****
20620905-C-A 18459019-C-A P4_Prx 14×A**
17713845-A-T 15601965-A-T **
17713850-C-T 15601970-C-T FTA14835 23×T**
20230152-T-TAA 18068266-T-TAA P5_Dst 16×A**
14844387-C-A 12732453-C-A **
7282159-C-CTT 7414118-C-CTT 22×T**
14253234-G-A 12132528-G-A FGC48411 **
18035697-A-T 15923817-A-T **
22419851-T-C 20257965-T-C BY60046BY217749 DYZ19 **
22236342-G-A 20074456-G-A DYZ19 **
13485632-C-T 11329956-C-T **
9735636-C-T 9898027-C-T IR3_Prx **
15491939-GTGTA-G 13380059-GTGTA-G **
14757394-C-A 12645463-C-A **
22236343-T-C 20074457-T-C DYZ19 **
10990830-T-C **
17713847-C-T 15601967-C-T **
10692148-G-T **
10950372-C-G **
18147559-A-C 16035679-A-C **
15971222-G-A 13859342-G-A **
10877373-T-C **
10877375-C-T **
10959799-C-A **
22842294-C-A 20680408-C-A **
22961984-GT-G 20800098-GT-G 8×T**
10799466-CGA-G **
17940700-C-A 15828820-C-A **
17882834-C-A 15770954-C-A **
10763038-T-TTGTGTTCTGC **
10763054-T-C **
3887790-G-T 4019749-G-T **
14397466-C-A 12276762-C-A **
22236320-T-C 20074434-T-C DYZ19 **
22236344-A-T 20074458-A-T DYZ19 **
24402056-T-C 22255909-T-C **
6085367-C-A 6217326-C-A **
22625039-C-A 20463153-C-A **
10746906-TCA-T **
20326037-G-TT 18164151-G-TT P5_Dst **
5446919-C-A 5578878-C-A **
7081234-C-A 7213193-C-A **
10660930-T-C **
10974816-GCCACT-G **
22137014-C-A 19975128-C-A **
18106769-C-A 15994889-C-A **
5775546-C-A 5907505-C-A **
10781129-C-T **
10781137-A-C **
15689056-C-A 13577176-C-A **
10692306-T-C **
2855467-A-ATT 2987426-A-ATT 16×T**
15898881-C-A 13787001-C-A **
5084312-G-T 5216271-G-T **
10797507-C-A **
56763525-T-G **
15486057-C-A 13374177-C-A **
22236318-G-A 20074432-G-A DYZ19 **
11019418-C-A **
23005396-C-A 20843510-C-A **
28656995-C-A 26510848-C-A **
14345058-GAA-G 12224353-GAA-G 13×A**
6012740-C-A 6144699-C-A **
10994110-C-A **
10950452-C-T **
10950459-CACCACTCTAA-C **
13893389-A-G 11772683-A-G **
16001363-G-T 13889483-G-T **
22936330-C-T 20774444-C-T **
10932565-C-A **
13527688-C-A 11372012-C-A **
18926905-G-A 16815025-G-A **
23435817-C-A 21273931-C-A **
10812394-G-T **
28545793-C-A 26399646-C-A **
6882528-C-A 7014487-C-A **
26563900-G-T 24417753-G-T P1_g2 **
10653792-C-A **
13996280-C-A 11875574-C-A **
15132121-T-C 13020208-T-C **
16475336-T-G 14363456-T-G MF1999 **
15049918-C-CAA 12938009-C-CAA 18×A**
13235010-C-A 11079334-C-A **
17568446-G-T 15456566-G-T FT139549 **
17370865-C-A 15258985-C-A **
14324619-C-A 12203913-C-A **
10665123-C-A **
10836872-G-T **
14053484-C-A 11932778-C-A **
15997484-C-A 13885604-C-A **
7042927-C-A 7174886-C-A **
18147546-G-T 16035666-G-T **
7224038-C-A 7355997-C-A **
28033130-A-AC 25886983-A-AC P1_Y2 **
15420236-C-A 13308356-C-A **
10814736-C-A **
16450328-C-A 14338448-C-A **
15503168-C-A 13391288-C-A **
18948235-G-A 16836355-G-A **
5313525-C-A 5445484-C-A **
10861395-T-C **
18864707-C-A 16752827-C-A **
7240817-C-A 7372776-C-A FT88001 **
13468013-A-G 11312337-A-G **
10957840-C-T FT438163 **
2685614-G-T 2817573-G-T **
2699637-G-T 2831596-G-T **
2699641-G-T 2831600-G-T **
2699650-G-T 2831609-G-T **
2708700-T-G 2840659-T-G **
2744813-C-A 2876772-C-A **
2790723-C-A 2922682-C-A **
2885442-C-A 3017401-C-A **
2924190-G-A 3056149-G-A **
2948283-A-C 3080242-A-C **
2978999-C-A 3110958-C-A **
2979085-C-A 3111044-C-A **
2991169-T-C 3123128-T-C **
3073706-A-G 3205665-A-G **
3073739-T-A 3205698-T-A **
3223374-A-C 3355333-A-C **
3246433-G-T 3378392-G-T **
3279563-A-T 3411522-A-T **
3343867-C-A 3475826-C-A **
3355176-G-T 3487135-G-T **
3476598-C-A 3608557-C-A **
3477681-T-C 3609640-T-C **
3589956-G-T 3721915-G-T **
3591136-T-G 3723095-T-G **
3614386-A-C 3746345-A-C **
3621287-A-T 3753246-A-T **
3651392-A-G 3783351-A-G **
3659234-G-A 3791193-G-A **
3748696-C-G 3880655-C-G **
3830957-G-C 3962916-G-C **
3830972-G-C 3962931-G-C **
3830974-G-T 3962933-G-T **
3830976-G-C 3962935-G-C **
3887748-T-C 4019707-T-C **
3887764-A-T 4019723-A-T **
3887768-A-C 4019727-A-C FGC52521 **
3911288-C-A 4043247-C-A **
3922751-G-T 4054710-G-T **
3951395-C-A 4083354-C-A **
4050114-G-T 4182073-G-T **
4064224-C-A 4196183-C-A **
4073771-C-T 4205730-C-T **
4100581-G-A 4232540-G-A FTB4930 **
4147429-G-T 4279388-G-T **
4150162-T-C 4282121-T-C **
4311070-G-T 4443029-G-T **
4326440-T-A 4458399-T-A **
4326446-T-C 4458405-T-C **
4338463-CTT-C 4470422-CTT-C 12×T**
4346416-G-T 4478375-G-T **
4383250-G-T 4515209-G-T **
4451845-G-T 4583804-G-T **
4582513-T-C 4714472-T-C **
4665837-C-A 4797796-C-A **
4728369-TTATTG-T 4860328-TTATTG-T **
4735777-G-T 4867736-G-T **
4758046-G-T 4890005-G-T **
4758085-C-A 4890044-C-A **
4767253-C-A 4899212-C-A **
4806379-G-T 4938338-G-T **
4840737-C-G 4972696-C-G **
4840747-C-T 4972706-C-T **
4900267-A-G 5032226-A-G **
4900284-G-T 5032243-G-T **
4918158-G-T 5050117-G-T **
4918494-C-A 5050453-C-A **
4956940-C-A 5088899-C-A **
5061159-C-T 5193118-C-T **
5127022-G-T 5258981-G-T **
5170647-C-A 5302606-C-A **
5170653-C-A 5302612-C-A **
5170654-C-A 5302613-C-A **
5225833-C-A 5357792-C-A **
5292210-C-A 5424169-C-A **
5313418-G-T 5445377-G-T **
5490863-C-A 5622822-C-A **
5494618-C-A 5626577-C-A **
5504551-G-T 5636510-G-T **
5559997-C-A 5691956-C-A **
5567848-C-A 5699807-C-A **
5636188-C-A 5768147-C-A **
5669892-A-C 5801851-A-C **
5698799-C-A 5830758-C-A **
5722625-G-T 5854584-G-T **
5728012-A-C 5859971-A-C **
5785533-C-A 5917492-C-A **
5816403-TC-T 5948362-TC-T **
5817652-G-T 5949611-G-T **
5817774-G-C 5949733-G-C **
5869655-C-A 6001614-C-A **
5960240-C-A 6092199-C-A **
5990254-G-T 6122213-G-T **
6289425-A-AGC 6421384-A-AGC IR3_Dst **
6429688-C-A 6561647-C-A **
6482451-C-T 6614410-C-T **
6490751-C-A 6622710-C-A **
6535283-C-A 6667242-C-A **
6747976-T-G 6879935-T-G **
6770758-A-ATT 6902717-A-ATT 14×T**
6771682-A-C 6903641-A-C **
6798908-C-A 6930867-C-A **
6825452-G-T 6957411-G-T **
6918507-C-A 7050466-C-A **
6934689-C-A 7066648-C-A **
6976536-C-A 7108495-C-A **
6978145-T-A 7110104-T-A **
7029898-G-T 7161857-G-T **
7040360-C-G 7172319-C-G **
7042921-T-A 7174880-T-A **
7111531-G-A 7243490-G-A **
7159089-C-A 7291048-C-A **
7164138-A-G 7296097-A-G **
7196258-C-A 7328217-C-A **
7222171-A-G 7354130-A-G **
7235916-G-T 7367875-G-T **
7289372-C-A 7421331-C-A **
7347702-T-C 7479661-T-C **
7374949-T-C 7506908-T-C **
7504982-C-A 7636941-C-A IR1_L **
7645161-G-T 7777120-G-T **
7646548-A-C 7778507-A-C **
7664174-A-T 7796133-A-T **
7714043-C-A 7846002-C-A **
7756830-C-A 7888789-C-A **
7897538-G-T 8029497-G-T **
7964701-A-G 8096660-A-G **
7985661-C-A 8117620-C-A **
7990829-C-A 8122788-C-A **
8052083-C-A 8184042-C-A **
8109798-A-G 8241757-A-G **
8109804-A-G 8241763-A-G ZS11853 **
8109808-T-G 8241767-T-G **
8110509-T-C 8242468-T-C **
8135600-C-A 8267559-C-A **
8142831-G-A 8274790-G-A **
8142836-T-A 8274795-T-A **
8142861-G-A 8274820-G-A **
8142865-C-G 8274824-C-G **
8142866-A-G 8274825-A-G **
8142870-G-C 8274829-G-C **
8167927-C-A 8299886-C-A **
8371642-G-T 8503601-G-T **
8699159-A-G 8831118-A-G **
8713098-T-G 8845057-T-G **
8713102-T-G 8845061-T-G **
8715143-CA-C 8847102-CA-C **
8736827-C-A 8868786-C-A **
8914851-A-G 9046810-A-G **
9121415-G-T FT128495 **
8987277-A-C 9149668-A-C **
9015416-G-T 9177807-G-T **
9173548-GC-G 9335939-GC-G **
9417007-C-A 9579398-C-A **
9456616-C-T 9619007-C-T **
9805119-C-A 9967510-C-A **
9927474-G-A 10089865-G-A **
9942811-C-A 10105202-C-A **
9969682-C-A 10132073-C-A **
10024878-G-A 10187269-G-A **
10040825-C-A 10203216-C-A **
10660553-C-T FT63783 **
10665121-C-G **
10665124-C-A **
10666423-C-A **
10668999-C-A **
10672508-C-T **
10677645-C-A **
10679162-C-G **
10683901-C-A **
10685704-C-A **
10692303-A-G **
10755534-C-A **
10761547-C-A **
10767382-C-A **
10767477-C-A **
10769125-G-T **
10771308-C-A **
10776886-C-A **
10776975-C-G **
10785140-G-T **
10785147-C-G **
10801217-C-A **
10801249-T-G **
10801975-C-T **
10814731-T-C **
10814741-C-A **
10816399-G-T **
10819824-C-A **
10860008-C-A **
10860125-C-A **
10861356-C-A **
10861381-C-G **
10861384-T-C **
10861403-A-C **
10861407-C-G **
10861413-C-A **
10861417-C-T **
10861429-GC-G **
10861444-A-C **
10931329-C-A **
10931335-A-C **
10931341-C-A **
10941175-C-A **
10942407-C-A **
10942915-T-G **
10944252-T-C **
10944549-C-T **
10950475-T-A **
10956748-C-T **
10963506-C-A **
10974680-G-T **
10987500-A-T **
10996151-C-A **
11002023-C-A **
11006657-G-T **
11007162-C-A **
11014029-T-G **
11014044-C-A **
11014096-A-C **
11015808-T-A **
11025270-T-A **
11035156-G-T **
13200421-C-A 11044745-C-A **
13230448-C-A 11074772-C-A **
13256453-T-C 11100777-T-C **
13268892-T-C 11113216-T-C **
13309852-T-C 11154176-T-C **
13402770-C-A 11247094-C-A **
13462256-CCCCCCTCACCCCTA-C 11306580-CCCCCCTCACCCCTA-C **
13468011-T-A 11312335-T-A **
13485499-C-A 11329823-C-A **
13513017-C-T 11357341-C-T **
13540385-G-T 11384709-G-T **
13585943-T-C 11430267-T-C BY37072 **
13627171-C-A 11471495-C-A **
13642818-T-C 11487142-T-C **
13644109-G-T 11488433-G-T **
11646443-G-T DYZ17 **
11646512-G-T DYZ17 **
11651056-C-A DYZ17 **
11651105-A-C DYZ17 **
11659996-CGAATG-C DYZ17 **
11663884-G-A DYZ17 **
13870788-T-G 11750082-T-G **
13870789-G-T 11750083-G-T **
13892026-G-T 11771320-G-T **
13892037-G-T 11771331-G-T **
13898649-C-A 11777943-C-A **
13960670-C-T 11839964-C-T FT60440 **
13969632-G-T 11848926-G-T **
14036230-C-A 11915524-C-A **
14050098-T-A 11929392-T-A **
14113876-C-A 11993170-C-A **
14178366-G-T 12057660-G-T **
14188069-C-A 12067363-C-A **
14230172-C-A 12109466-C-A **
14245090-C-A 12124384-C-A **
14286076-C-A 12165370-C-A **
14286084-G-A 12165378-G-A **
14303254-GA-G 12182548-GA-G **
14345028-C-A 12224323-C-A **
14355067-C-A 12234362-C-A **
14357817-G-C 12237112-G-C **
14442927-A-C 12322200-A-C **
14468833-A-G 12348102-A-G **
14490844-AT-A 12370113-AT-A **
14500224-C-A 12388429-C-A **
14506985-A-G 12395190-A-G **
14512487-C-A 12400692-C-A **
14537690-C-A 12425891-C-A **
14605792-C-A 12493994-C-A **
14607589-G-T 12495791-G-T **
14633502-G-T 12521571-G-T **
14654226-A-G 12542291-A-G **
14669452-C-A 12557518-C-A **
14796635-A-C 12684706-A-C **
14888012-C-A 12776078-C-A **
15012327-G-C 12900415-G-C **
15185486-C-A 13073572-C-A **
15210889-G-T 13098975-G-T **
15276447-G-A 13164536-G-A **
15301780-G-T 13189879-G-T **
15302613-C-A 13190712-C-A **
15342559-C-T 13230678-C-T **
15375902-C-A 13264022-C-A **
15423897-C-A 13312017-C-A **
15556777-C-A 13444897-C-A **
15556833-C-A 13444953-C-A **
15728968-C-A 13617088-C-A **
15732173-C-A 13620293-C-A **
15743015-T-A 13631135-T-A **
15748004-G-T 13636124-G-T **
15792926-A-C 13681046-A-C **
15995205-C-A 13883325-C-A **
15995307-G-A 13883427-G-A **
16002938-T-A 13891058-T-A **
16004109-C-A 13892229-C-A **
16048187-A-T 13936307-A-T **
16054252-C-A 13942372-C-A **
16119967-C-CTTTT 14008087-C-CTTTT P8_Prx **
16270402-C-A 14158522-C-A **
16271924-G-A 14160044-G-A **
16279139-C-A 14167259-C-A **
16422716-A-T 14310836-A-T **
16506681-C-A 14394801-C-A **
16522427-A-G 14410547-A-G **
16553908-G-A 14442028-G-A **
16559794-C-T 14447914-C-T **
16568164-A-C 14456284-A-C **
16574622-C-A 14462742-C-A **
16583278-G-A 14471398-G-A **
16617643-C-A 14505763-C-A **
16652978-A-G 14541098-A-G **
16689925-G-A 14578045-G-A **
16692845-G-A 14580965-G-A **
16702792-G-A 14590912-G-A **
16842926-G-GT 14731046-G-GT **
16914948-G-A 14803068-G-A **
16945603-C-A 14833723-C-A **
16993781-G-A 14881901-G-A **
16993904-C-A 14882024-C-A **
16996617-G-A 14884737-G-A **
16996633-T-G 14884753-T-G **
17004542-C-A 14892662-C-A **
17196380-G-A 15084500-G-A **
17255130-T-C 15143250-T-C **
17255134-G-T 15143254-G-T **
17255140-G-C 15143260-G-C **
17306761-T-A 15194881-T-A **
17306828-A-C 15194948-A-C **
17375114-A-G 15263234-A-G **
17375168-G-A 15263288-G-A **
17478862-C-A 15366982-C-A **
17479179-C-A 15367299-C-A **
17498938-C-A 15387058-C-A **
17561439-C-T 15449559-C-T **
17567515-A-G 15455635-A-G **
17568390-G-T 15456510-G-T **
17650202-C-G 15538322-C-G **
17650204-C-G 15538324-C-G **
17666529-C-A 15554649-C-A **
17668323-C-A 15556443-C-A **
17713835-C-T 15601955-C-T **
17840393-T-G 15728513-T-G **
17884443-C-A 15772563-C-A **
17963440-C-A 15851560-C-A **
18006638-C-A 15894758-C-A FT330687 P7_Gap **
18059642-C-A 15947762-C-A **
18088281-C-A 15976401-C-A **
18174680-G-T 16062800-G-T **
18188222-T-A 16076342-T-A **
18354429-G-T 16242549-G-T P6_Prx **
18524562-C-A 16412682-C-A P6_Dst **
18534209-C-T 16422329-C-T P6_Dst **
18653432-T-A 16541552-T-A **
18660120-T-A 16548240-T-A **
18778890-C-A 16667010-C-A **
18810925-A-G 16699045-A-G FT30876 **
18906295-C-A 16794415-C-A **
18926905-G-GT 16815025-G-GT **
18964044-C-A 16852164-C-A **
18964064-G-A 16852184-G-A **
19059744-ATTCT-A 16947864-ATTCT-A **
19104552-C-A 16992672-C-A **
19213537-C-A 17101657-C-A **
19256284-T-C 17144404-T-C **
19300281-C-A 17188401-C-A **
19356459-C-A 17244579-C-A **
19411755-C-A 17299875-C-A **
19418417-C-A 17306537-C-A **
19436875-G-T 17324995-G-T **
19496302-C-A 17384422-C-A **
19577630-A-AG 17465750-A-AG P5_Prx **
19604897-G-T 17493017-G-T P5_Prx **
19947705-C-A 17835825-C-A P5_Prx **
19948184-T-TTCTG 17836304-T-TTCTG P5_Prx **
20252820-A-G 18090934-A-G P5_Dst **
20632040-C-A 18470154-C-A P4_Prx **
20815775-C-A 18653889-C-A P4_Gap **
21153750-A-G 18991864-A-G **
21153877-A-T 18991991-A-T **
21207095-A-C 19045209-A-C **
21207482-G-T 19045596-G-T **
21360302-C-A 19198416-C-A **
21393999-C-A 19232113-C-A **
21464471-A-C 19302585-A-C **
21472319-C-A 19310433-C-A **
21488969-G-T 19327083-G-T **
21496840-A-G 19334954-A-G FT51284 **
21511179-A-C 19349293-A-C **
21511190-A-C 19349304-A-C **
21513912-T-C 19352026-T-C **
21540846-T-C 19378960-T-C **
21598395-C-T 19436509-C-T **
21617695-C-A 19455809-C-A **
21714699-A-G 19552813-A-G **
21748239-T-A 19586353-T-A **
21851654-G-T 19689768-G-T **
21950128-C-A 19788242-C-A **
22088883-C-A 19926997-C-A **
22189199-C-A 20027313-C-A **
22580141-C-A 20418255-C-A **
22592262-T-A 20430376-T-A **
22614834-A-T 20452948-A-T **
22689926-C-T 20528040-C-T **
22690024-C-A 20528138-C-A **
22775154-A-T 20613268-A-T **
22874483-G-T 20712597-G-T **
23027024-C-A 20865138-C-A **
23086487-C-A 20924601-C-A **
23096336-G-T 20934450-G-T **
23120096-C-A 20958210-C-A **
23340586-A-G 21178700-A-G **
23342078-G-T 21180192-G-T **
23401412-T-A 21239526-T-A **
23817910-C-T 21656024-C-T **
24403483-G-T 22257336-G-T **
24535234-A-C 22389087-A-C P3_t2 **
24910830-G-A 22764683-G-A g1 **
25560775-G-T 23414628-G-T P1_gr1 **
25720191-G-T 23574044-G-T P1_b3 **
26025679-A-C 23879532-A-C P1_Y1 **
26626442-A-T 24480295-A-T P1_g2 **
27535295-G-T 25389148-G-T P1_Y2 **
28033094-G-T 25886947-G-T P1_Y2 **
28157444-T-G 26011297-T-G P1_b4 **
28469367-T-A 26323220-T-A **
28485974-C-A 26339827-C-A **
28532007-C-A 26385860-C-A **
28549911-C-A 26403764-C-A **
28555749-C-A 26409602-C-A **
28558143-G-T 26411996-G-T **
28561104-C-A 26414957-C-A **
28589469-G-A 26443322-G-A **
28617480-C-A 26471333-C-A **
28618276-G-A 26472129-G-A **
28624590-T-A 26478443-T-A **
28631499-T-A 26485352-T-A **
28658421-T-G 26512274-T-G **
28697981-C-A 26551834-C-A **
28724087-T-C 26577940-T-C **
28724216-G-C 26578069-G-C **
28754404-T-C 26608257-T-C **
28775386-A-G 26629239-A-G **
28777192-C-A 26631045-C-A **
28798464-A-T 26652317-A-T A13806 **
56763517-G-T **
56840560-T-G **
56850596-G-T **
56850708-A-C **
56850747-C-A **
56858614-G-T **
56858698-C-A **
11324-C-A **
15252822-ACT-A 13140908-ACT-A **
26066386-T-TC 23920239-T-TC P1_Y1 **
25520331-G-T 23374184-G-T P1_gr1 **
5337177-A-G 5469136-A-G **
5811752-A-G 5943711-A-G **
6007637-T-C 6139596-T-C **
8740512-T-C 8872471-T-C **
10043936-TA-T 10206327-TA-T **
13264888-C-T 11109212-C-T **
14681681-A-G 12569747-A-G **
14743081-G-A 12631149-G-A **
19784878-CT-C 17672998-CT-C P5_Prx 16×T**
19872489-A-AAG 17760609-A-AAG P5_Prx **
21056205-G-C 18894319-G-C **
22312727-C-T 20150841-C-T DYZ19 **
22419853-T-C 20257967-T-C DYZ19 **
23288424-C-A 21126538-C-A **
25995054-TA-T 23848907-TA-T P1_Y1 **
26060559-C-A 23914412-C-A P1_Y1 **
26161329-A-T 24015182-A-T P1_Y1 **
27572560-T-TGA 25426413-T-TGA P1_Y2 **
28054977-G-A 25908830-G-A P1_Y2 **
13818128-GAATAA-G 11697422-GAATAA-G DYZ17 ***
28793473-G-A 26647326-G-A ***
13457716-G-GATTCCATTCC 11302040-G-GATTCCATTCC 12×ATTCC***
15308826-TAC-T 13196928-TACAC-T 20×AC***
9771939-TC-T 9934330-TC-T ***
6494541-G-A 6626500-G-A FTB20258 ***
7188697-GGA-G 7320656-GGA-G ***
58982156-A-T 56836009-A-T ***
7485045-C-A 7617004-C-A IR1_L ***
13457700-C-A 11302024-C-A ***
24860257-G-T 22714110-G-T IR1_R ***
25013895-C-G 22867748-C-G g1 ***
25153154-A-T 23007007-A-T g1 ***
25184482-G-A 23038335-G-A g1 ***
4581638-ATT-A 4713597-ATT-A 13×T***
16842867-A-ATGTG 14730987-A-ATGTG 22×TG***
58848125-C-G 56742746-G-C ***
13472131-G-A 11316455-G-A ***
10980661-A-C ***
14724445-C-A 12612513-C-A ***
14774281-TG-T,TT 12662350-TG-T,TT ***
18693658-C-A 16581778-C-A ***
9941223-C-A 10103614-C-A ***
10950873-C-A ***
14180746-C-A 12060040-C-A ***
10051225-T-A 10213616-T-A ***
15382762-C-A 13270882-C-A ***
10763347-T-C,G ***
19529116-CTT-C,CT 17417236-CTT-C,CT 14×T***
3012669-G-A 3144628-G-A ***
3451986-G-T 3583945-G-T ***
3834915-A-G 3966874-A-G ***
5393268-A-T 5525227-A-T ***
6346089-T-A 6478048-T-A ***
7579591-TA-T 7711550-TA-T ***
7759031-A-G 7890990-A-G ***
7759114-C-A 7891073-C-A ***
9075827-G-T 9238218-G-T ***
9952177-C-A 10114568-C-A ***
10023781-C-A 10186172-C-A ***
10051233-T-G 10213624-T-G ***
10051239-T-C 10213630-T-C ***
10057323-C-A 10219714-C-A ***
10654606-CTCCAT-C ***
10785247-C-A ***
10837914-A-T ***
10946354-C-T ***
10987738-C-A ***
11035865-G-T ***
13452560-C-A 11296884-C-A ***
13467956-G-T 11312280-G-T ***
13643810-C-A 11488134-C-A ***
13801074-G-T 11680368-G-T DYZ17 ***
15211033-TG-T 13099119-TG-T ***
15655620-C-A 13543740-C-A ***
15762044-G-T 13650164-G-T ***
16412789-C-A 14300909-C-A ***
16427543-C-A 14315663-C-A ***
18748959-C-T 16637079-C-T ***
18892221-A-G 16780341-A-G ***
22204546-G-T 20042660-G-T ***
22275792-C-T 20113906-C-T DYZ19 ***
22542692-C-A 20380806-C-A ***
56826966-A-C,CCATTT ***
56828950-ATGTC-A,ATGCT ***
56832773-C-A ***
56832883-C-A ***
21919393-CT-C 19757507-CT-C 10×T***
4377969-CTTTT-C 4509928-CTTTT-C 19×T***
13467964-T-A 11312288-T-A ***
2649621-C-A 2781580-C-A ***
21394411-T-C 19232525-T-C ***
15936990-C-A 13825110-C-A ***
17604931-GTTTTTTT-G 15493051-GTTTTTTT-G 24×T***
13612925-G-A 11457249-G-A ***
13612920-T-C 11457244-T-C ***
3745926-T-TA 3877885-T-TA ***
4816965-T-TA 4948924-T-TA ***
5502265-AAAAAAG-A 5634224-AAAAAAG-A ***
7088126-A-C 7220085-A-C ***
13463226-T-A,G 11307550-T-A,G ***
13467936-A-C 11312260-A-C ***
13467985-A-G 11312309-A-G ***
13492952-C-T 11337276-C-T ***
16723445-T-A 14611565-T-A ***
19204149-A-G 17092269-A-G ***
22462527-A-G 20300641-A-G DYZ19 ***
23029774-G-T 20867888-G-T ***
21753671-T-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.