McCoy

FTDNA: B1955, BigY2: B1955
MDKA Birth: Scotland

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > S764 > S699 > S756 > Z16328 > FGC32449 > FGC45274 > ~22261318-T-G > A3262 > A30 > A35 > BY155

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
B1955		BigY2
B1955
28587793-T-A 26441646-T-A A*
6191320-C-A 6323279-C-A IR3_Dst A*
13687769-A-C 11532093-A-C DYZ17 A*
28817597-A-T 26671450-A-T A*
13687943-A-T 11532267-A-T DYZ17 A*
26162020-A-AT 24015873-A-AT P1_Y1 9×TA*
13458686-C-G 11303010-C-G A*
19685856-A-AT 17573976-A-AT P5_Prx 9×TA*
26243398-C-G 24097251-C-G P1_Y1 A*
13936205-G-GAAGAAAGAAAGAAAGAAAGA 11815499-G-GAAGAAAGAAAGAAAGAAAGA 14×AAGA****
59033046-C-T 56886899-C-T **
13809910-G-A 11689204-G-A DYZ17 **
13860593-C-T 11739887-C-T FT116270 DYZ17 **
59033093-T-C 56886946-T-C **
59033099-T-A 56886952-T-A **
59033101-C-T 56886954-C-T **
59033032-G-A 56886885-G-A **
59033108-T-C 56886961-T-C **
59033112-T-C 56886965-T-C **
14771285-G-A 12659354-G-A CTS3257 **
28604465-C-G 26458318-C-G CTS12543 **
26120257-TTTCC-T 23974110-TTTCC-T P1_Y1 5×TTCC**
6250506-C-A 6382465-C-A FGC80937 IR3_Dst **
4223442-A-G 4355401-A-G ****
6757694-A-C 6889653-A-C **
6878915-A-T 7010874-A-T **
16492532-G-T 14380652-G-T PR5835 ****
18020806-G-C 15908926-G-C ****
23198909-C-A 21037023-C-A ****
24415780-A-C 22269633-A-C **
25939863-A-G 23793716-A-G P1_Y1 **
24296319-C-A 22150172-C-A P3_t1 **
4067369-T-A 4199328-T-A 26×A**
13233337-G-A 11077661-G-A **
13273371-CT-C 11117695-CT-C 10×T**
13588226-T-A 11432550-T-A **
18390083-C-A 16278203-C-A P6_Gap 19×A**
23364104-G-A 21202218-G-A **
21200202-G-T 19038316-G-T **
22268152-T-A 20106266-T-A DYZ19 **
8056265-G-A 8188224-G-A **
9891037-T-C 10053428-T-C **
9929308-C-T 10091699-C-T **
9929314-G-C 10091705-G-C **
14292801-G-A 12172095-G-A K200 **
15288100-T-C 13176199-T-C **
15433481-T-C 13321601-T-C M6406 **
16480170-G-A 14368290-G-A **
22429624-G-C 20267738-G-C DYZ19 **
23364108-G-A 21202222-G-A **
20649914-T-C 18488028-T-C P4_Prx **
24052532-C-A 21906385-C-A P3_b1 **
23514293-C-T 21352407-C-T **
15433500-G-A 13321620-G-A **
15353791-T-C 13241910-T-C **
22164362-A-C 20002476-A-C FGC23293 **
8644278-G-A 8776237-G-A BY3504Y22925 **
9929301-G-A 10091692-G-A FT367498 **
9929292-T-C 10091683-T-C **
6663751-G-T 6795710-G-T **
7984440-G-A 8116399-G-A **
22316207-T-G 20154321-T-G DYZ19 **
13801484-A-C 11680778-A-C DYZ17 **
23373519-T-C 21211633-T-C **
22436200-T-C 20274314-T-C DYZ19 **
13801468-C-G 11680762-C-G DYZ17 **
11021660-A-T **
21979988-C-A 19818102-C-A **
20993599-A-AG 18831713-A-AG P4_Dst **
10934703-T-A **
28610396-T-G 26464249-T-G **
14033954-G-A 11913248-G-A **
10947627-T-A **
6918523-G-A 7050482-G-A **
14080001-G-T 11959295-G-T **
18926872-CAAAAAA-C 16814992-CAAAAAA-C 17×A**
6765588-T-G 6897547-T-G **
11010246-A-C **
15402848-A-C 13290968-A-C **
17085721-CTTTTT-C 14973841-CTTTTT-C 20×T**
8345911-A-G 8477870-A-G **
14017681-C-A 11896975-C-A **
13205337-T-G 11049661-T-G **
13205339-C-T 11049663-C-T **
23199910-G-C 21038024-G-C **
13487726-C-T 11332050-C-T **
13487747-C-CA 11332071-C-CA **
22429608-A-G 20267722-A-G DYZ19 **
22429611-A-G 20267725-A-G F7734 DYZ19 **
25524729-G-A 23378582-G-A P1_gr1 **
14384968-C-A 12264264-C-A **
11010249-C-A **
16783310-C-A 14671430-C-A **
10938323-ACTACAGTCCT-A **
19304704-C-A 17192824-C-A **
25333905-G-A 23187758-G-A P2_r1 **
15132082-A-T 13020169-A-T **
28610362-T-C 26464215-T-C **
15215520-T-C 13103606-T-C **
21315156-C-T 19153270-C-T **
21315158-TG-T 19153272-TG-T **
10814878-T-C **
15986671-T-G 13874791-T-G **
10749107-C-A **
17347562-C-A 15235682-C-A **
10657835-G-T FT428335 **
6953386-G-GA 7085345-G-GA 9×A**
8056205-A-T 8188164-A-T **
10796129-T-C **
10951735-C-T **
16896346-T-C 14784466-T-C **
22335163-A-G 20173277-A-G DYZ19 **
14308225-C-A 12187519-C-A **
28607818-C-A 26461671-C-A **
11010412-T-A **
23779725-C-A 21617839-C-A **
16175235-T-C 14063355-T-C **
16648166-A-C 14536286-A-C **
21921904-T-G 19760018-T-G **
14908270-C-T 12796337-C-T **
14908271-A-G 12796338-A-G **
14908279-A-T 12796346-A-T **
10947638-A-AATCCT **
4172308-C-A 4304267-C-A **
28768636-C-A 26622489-C-A **
10767673-C-T **
14858946-C-T 12747012-C-T **
9438099-C-T 9600490-C-T 30×T**
15696895-T-G 13585015-T-G **
15696902-T-C 13585022-T-C **
2666602-T-G 2798561-T-G **
13233340-G-A 11077664-G-A **
28594251-A-G 26448104-A-G **
7252333-C-A 7384292-C-A **
5204578-C-A 5336537-C-A **
6944002-C-A 7075961-C-A **
28809344-G-A 26663197-G-A **
28809349-T-A 26663202-T-A **
10936077-T-C **
7615204-C-A 7747163-C-A **
16598974-T-C 14487094-T-C **
24475434-C-A 22329287-C-A **
21315178-T-C 19153292-T-C **
22023255-G-A 19861369-G-A **
26117878-A-T 23971731-A-T P1_Y1 **
10831632-T-C **
10938335-TCCACC-T **
9764161-T-G 9926552-T-G **
17300683-G-A 15188803-G-A **
13936467-C-A 11815761-C-A **
10937409-C-G **
10937431-A-T **
6177568-A-C 6309527-A-C IR3_Dst **
10934714-T-TG **
15215450-T-A 13103536-T-A **
15215452-T-C 13103538-T-C **
15215457-A-C 13103543-A-C **
6697212-C-A 6829171-C-A **
15986675-C-A 13874795-C-A **
15844733-G-A 13732853-G-A **
10934725-C-G **
10814855-T-A **
4983799-TG-T 5115758-TG-T **
10651645-G-T **
11005131-C-A **
13239636-A-G 11083960-A-G **
11025378-A-AT **
11025385-C-T **
11021663-A-C **
10778821-C-T **
7106428-C-T 7238387-C-T FT289297 **
27762810-C-T 25616663-C-T P1_Y2 **
15402839-C-T 13290959-C-T **
13487769-A-C 11332093-A-C **
14539420-A-C 12427621-A-C **
28778886-G-T 26632739-G-T **
7425206-C-A 7557165-C-A **
2747818-AAT-A 2879777-AAT-A **
14572958-C-A 12461158-C-A **
16583340-G-A 14471460-G-A Y70161 **
22215285-A-G 20053399-A-G **
22215310-C-T 20053424-C-T **
28483025-C-T 26336878-C-T **
22594654-A-C 20432768-A-C **
16583341-C-T 14471461-C-T **
8704246-C-G 8836205-C-G **
10876105-C-G **
6697140-C-A 6829099-C-A **
10794533-G-T **
15909435-T-G 13797555-T-G **
10692569-C-T FT45459 **
11006668-C-T **
27980973-T-TC 25834826-T-TC P1_Y2 **
18976603-G-T 16864723-G-T **
13205311-C-T 11049635-C-T FT440741 **
7947046-A-T 8079005-A-T **
22962056-C-T 20800170-C-T **
10868105-A-T **
10868108-C-G **
11037100-C-A **
16904654-A-T 14792774-A-T **
10951254-T-C **
13937412-C-A 11816706-C-A **
14183358-T-A 12062652-T-A **
11009041-T-C **
22164360-G-A 20002474-G-A **
20927095-T-TTG 18765209-T-TTG P4_Dst **
10971685-C-T **
10785140-G-T **
3641498-C-A 3773457-C-A **
14065707-A-G 11945001-A-G **
13493191-C-A 11337515-C-A **
28782071-C-A 26635924-C-A **
18379870-T-TA 16267990-T-TA P6_Prx **
10963320-T-C **
15696911-A-G 13585031-A-G **
14183284-A-G 12062578-A-G Y90541 **
14183294-G-A 12062588-G-A **
14183296-T-A 12062590-T-A **
23056180-C-A 20894294-C-A **
17333985-T-C 15222105-T-C **
17334008-A-G 15222128-A-G **
21824913-C-A 19663027-C-A **
21880900-CA-C 19719014-CA-C **
14183374-G-A 12062668-G-A **
14405839-C-T 12285136-C-T **
14786629-T-C 12674699-T-C **
18183155-C-A 16071275-C-A **
6784638-C-A 6916597-C-A **
14785626-C-T 12673696-C-T **
10866507-C-A **
10765693-C-A **
14609786-C-G 12497988-C-G **
5494562-C-A 5626521-C-A **
11673211-C-A DYZ17 **
14458556-TC-T 12337829-TC-T **
9456617-G-A 9619008-G-A FT146169 **
10951258-TTCA-T **
8556229-A-G 8688188-A-G **
23742327-C-T 21580441-C-T FT122885 **
4540187-C-A 4672146-C-A **
2684041-G-T 2816000-G-T **
2684056-A-G 2816015-A-G **
18003242-G-A 15891362-G-A P7_Gap **
3909109-C-A 4041068-C-A 22×A**
10941206-T-C **
22155545-C-A 19993659-C-A **
14183309-C-T 12062603-C-T **
13588277-A-G 11432601-A-G **
10939711-G-T **
5031524-C-A 5163483-C-A **
7470626-T-A 7602585-T-A IR1_L **
7141993-T-C 7273952-T-C **
11674735-T-A DYZ17 **
11674738-C-G DYZ17 **
15104943-C-A 12993031-C-A **
18838837-C-A 16726957-C-A **
15132093-A-G 13020180-A-G **
19563169-C-A 17451289-C-A **
15202393-C-A 13090479-C-A **
18102146-A-G 15990266-A-G **
14927244-C-G 12815309-C-G **
14927249-A-G 12815314-A-G **
7984408-G-C 8116367-G-C **
14977296-CTTTTT-C 12865371-CTTTTT-C 15×T**
56752246-G-T **
18196362-G-T 16084482-G-T **
4293068-C-A 4425027-C-A FT371536 **
8704248-T-A 8836207-T-A **
11657715-C-A FT450592 DYZ17 **
5292890-A-G 5424849-A-G **
10883537-C-G **
56752237-C-A **
56752240-T-A **
56752241-C-A **
6903671-G-T 7035630-G-T **
10949550-C-G **
16050474-C-A 13938594-C-A **
15402842-C-G 13290962-C-G **
9040374-G-T 9202765-G-T **
21115899-C-A 18954013-C-A **
10841184-C-A **
24221459-C-A 22075312-C-A P3_b1 **
14192968-C-A 12072262-C-A **
22165107-G-T 20003221-G-T **
10079480-AT-A 10241871-AT-A 10×T**
6870688-C-A 7002647-C-A **
18534197-C-A 16422317-C-A P6_Dst **
2885457-AT-A 3017416-AT-A **
21410166-T-C 19248280-T-C **
7270315-G-A 7402274-G-A **
9830476-C-A 9992867-C-A **
5821704-C-A 5953663-C-A **
16136071-T-TC 14024191-T-TC P8_Dst **
9764157-G-A 9926548-G-A **
21444505-C-A 19282619-C-A **
8056245-C-T 8188204-C-T **
21880883-C-T 19718997-C-T **
10778841-T-C **
17467019-C-G 15355139-C-G **
6903688-G-A 7035647-G-A **
21371542-T-C 19209656-T-C **
21880882-C-T 19718996-C-T **
7221536-A-G 7353495-A-G **
9442137-A-G 9604528-A-G **
24508421-A-G 22362274-A-G **
18673689-C-A 16561809-C-A **
8181396-C-T 8313355-C-T **
6700803-A-G 6832762-A-G **
15986693-G-C 13874813-G-C **
15986698-G-A 13874818-G-A **
16305911-C-T 14194031-C-T **
8142787-C-A 8274746-C-A **
11009076-A-T **
10831619-T-A **
2772922-C-A 2904881-C-A **
14470490-G-A 12349759-G-A **
21141141-C-A 18979255-C-A **
6748819-T-A 6880778-T-A **
27053557-A-C 24907410-A-C P1_r4 **
7171910-C-A 7303869-C-A **
16572702-G-A 14460822-G-A Z28469 **
28600509-T-C 26454362-T-C **
28600510-G-A 26454363-G-A **
4888108-C-A 5020067-C-A **
6981156-G-A 7113115-G-A **
18539050-C-A 16427170-C-A **
21526937-T-A 19365051-T-A **
21526942-A-G 19365056-A-G **
21526954-A-T 19365068-A-T **
23255375-C-A 21093489-C-A **
22165100-G-A 20003214-G-A **
21750816-C-A **
19300700-C-A 17188820-C-A **
23305712-C-A 21143826-C-A **
27232188-CT-C 25086041-CT-C P1_g3 **
21410155-A-G 19248269-A-G **
6903824-C-A 7035783-C-A **
3712244-C-A 3844203-C-A **
28653819-C-A 26507672-C-A **
6903664-G-T 7035623-G-T **
8760575-G-A 8892534-G-A **
18626753-C-A 16514873-C-A FT24345 **
22882156-C-A 20720270-C-A **
19156152-G-A 17044272-G-A **
16357196-T-G 14245316-T-G **
16357206-G-GT 14245326-G-GT **
13223404-G-A 11067728-G-A **
7534643-CAAAAAA-C 7666602-CAAAAAA-C 17×A**
10778838-C-A **
10971683-G-A FT358519 **
17467014-T-C 15355134-T-C **
23514340-C-T 21352454-C-T **
17515431-CA-C 15403551-CA-C **
6994504-C-A 7126463-C-A **
13318015-T-A 11162339-T-A **
14183378-C-A 12062672-C-A **
16971268-G-A 14859388-G-A **
15696882-A-G 13585002-A-G **
14627225-C-A 12515293-C-A **
14511236-T-C 12399441-T-C **
14511239-C-T 12399444-C-T **
10947325-C-A **
7033313-A-G 7165272-A-G **
5073558-C-A 5205517-C-A **
22089878-T-C 19927992-T-C **
14183276-G-A 12062570-G-A **
14765290-G-T 12653359-G-T **
18196372-A-T 16084492-A-T **
10876052-G-T **
17122216-A-AT 15010336-A-AT 8×T**
21828501-C-A 19666615-C-A **
13998265-T-C 11877559-T-C **
23285174-C-A 21123288-C-A **
22101954-C-A 19940068-C-A **
19558821-C-A 17446941-C-A **
15842936-C-A 13731056-C-A **
13468307-C-T 11312631-C-T **
9764147-T-A 9926538-T-A **
19318272-T-C 17206392-T-C **
19318274-T-C 17206394-T-C **
14461327-C-A 12340600-C-A **
18174710-C-A 16062830-C-A **
13218726-T-C 11063050-T-C **
23311304-G-T 21149418-G-T **
7002362-T-C 7134321-T-C **
10876104-A-T **
16033830-C-A 13921950-C-A **
10988757-C-A **
28776776-C-A 26630629-C-A **
8043320-C-T 8175279-C-T **
13550405-A-G 11394729-A-G **
17478750-G-A 15366870-G-A **
11018452-C-T **
21923991-A-G 19762105-A-G **
8075355-T-G 8207314-T-G **
16754975-T-C 14643095-T-C **
10983135-C-A **
2684030-ATT-A 2815989-ATT-A **
2684062-A-C 2816021-A-C **
2708411-CGAGAGAGAGAGAGA-C 2840370-CGAGAGAGAGAGAGA-C 23×GA**
2745771-T-G 2877730-T-G **
2758183-G-T 2890142-G-T **
2759973-T-C 2891932-T-C **
2762059-CAAA-C 2894018-CAAA-C 8×A**
2773941-G-A 2905900-G-A **
2774753-G-C 2906712-G-C **
2856782-CTTTTTT-C 2988741-CTTTTTT-C 24×T**
2885423-G-A 3017382-G-A FT48634 **
2885425-TGAG-T 3017384-TGAG-T **
2885435-G-C 3017394-G-C **
2885440-G-A 3017399-G-A **
2885444-T-C 3017403-T-C **
2885450-T-C 3017409-T-C **
2885453-A-G 3017412-A-G **
2906665-T-G 3038624-T-G **
2928749-A-G 3060708-A-G FT73645 **
2967112-AT-A 3099071-AT-A **
3033433-A-G 3165392-A-G **
3240379-C-T 3372338-C-T FT38321 **
3274905-G-T 3406864-G-T **
3400234-G-T 3532193-G-T **
3422942-G-T 3554901-G-T **
3442284-A-G 3574243-A-G **
3463553-A-G 3595512-A-G **
3504198-G-T 3636157-G-T **
3537491-T-C 3669450-T-C **
3594839-AT-A 3726798-AT-A **
3649471-C-A 3781430-C-A **
3681646-C-A 3813605-C-A **
3695984-A-G 3827943-A-G **
3831599-T-C 3963558-T-C **
3865948-C-A 3997907-C-A **
3909225-G-T 4041184-G-T **
3929846-G-T 4061805-G-T **
3974711-G-T 4106670-G-T **
3975399-C-A 4107358-C-A **
3992113-G-A 4124072-G-A **
4052188-A-G 4184147-A-G **
4069629-G-T 4201588-G-T **
4215647-T-C 4347606-T-C **
4287979-G-T 4419938-G-T **
4323431-G-T 4455390-G-T **
4325584-T-C 4457543-T-C **
4329160-T-C 4461119-T-C **
4392280-GACAAA-G 4524239-GACAAA-G **
4398611-C-A 4530570-C-A **
4421797-G-T 4553756-G-T **
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19948181-C-CCTTTCTTT,T 17836301-C-CCTTTCTTT,T P5_Prx 21×CTTT***
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17278273-CGAAA-C,CG 15166393-CGAAA-C,CG 16×GAAA***
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26453074-GT-G 24306927-GT-G P1_Y1 12×T***
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13804390-G-A 11683684-G-A DYZ17 ***
13853578-A-G 11732872-A-G DYZ17 ***
13821011-G-A 11700305-G-A DYZ17 ***
13833544-C-G 11712838-C-G DYZ17 ***
13833591-A-G 11712885-A-G FT138091 DYZ17 ***
13865470-T-G 11744764-T-G DYZ17 ***
22421062-A-C 20259176-A-C DYZ19 ***
22421068-T-G 20259182-T-G DYZ19 ***
13853638-G-A 11732932-G-A DYZ17 ***
13194870-C-T 11039194-C-T ***
58977206-C-T 56831059-C-T ***
13837539-G-A 11716833-G-A DYZ17 ***
13847247-T-C 11726541-T-C DYZ17 ***
58975882-T-TCATTCCATTC 56829735-T-TCATTCCATTC ***
13661156-A-G 11505480-A-G DYZ17 ***
13801439-C-T 11680733-C-T DYZ17 ***
13801478-G-A 11680772-G-A DYZ17 ***
13801483-C-T 11680777-C-T DYZ17 ***
13801509-G-C 11680803-G-C DYZ17 ***
13801518-A-T 11680812-A-T DYZ17 ***
13801523-G-A 11680817-G-A FT451639 DYZ17 ***
13804706-T-G 11684000-T-G DYZ17 ***
13818016-T-C 11697310-T-C DYZ17 ***
13830344-A-G 11709638-A-G DYZ17 ***
13853680-C-A 11732974-C-A DYZ17 ***
28800306-T-C 26654159-T-C ***
13704423-A-G 11548747-A-G DYZ17 ***
13660583-G-A 11504907-G-A DYZ17 ***
13843373-A-T 11722667-A-T DYZ17 ***
13843374-G-A 11722668-G-A DYZ17 ***
13853682-C-G 11732976-C-G DYZ17 ***
20231508-C-CAAGAAAGAAAGAAAGA 18069622-C-CAAGAAAGAAAGAAAGA P5_Dst 21×AAGA***
21316034-G-A 19154148-G-A BY179651 ***
25465346-A-AT 23319199-A-AT P2_r2 15×T***
58820546-C-A 56770325-G-T ***
58844535-T-C 56746336-A-G ***
58876834-A-C 56714037-T-G ***
58980059-C-T 56833912-C-T ***
58975710-TC-AC,T 56829563-TC-AC,T ***
13824868-CAAATGGAATG-C 11704162-CAAATGGAATG-C DYZ17 ***
25176850-C-CTT 23030703-C-CTT g1 30×T***
13140106-T-A,C 10629592-T-A,C ***
13830346-G-A 11709640-G-A DYZ17 ***
13830348-A-T 11709642-A-T DYZ17 ***
13838532-G-A 11717826-G-A DYZ17 ***
13858471-A-T 11737765-A-T DYZ17 ***
13818687-G-A 11697981-G-A DYZ17 ***
13818695-A-G 11697989-A-G DYZ17 ***
13855099-T-C 11734393-T-C DYZ17 ***
28799008-G-A 26652861-G-A 5×GGAAT***
58975922-C-T 56829775-C-T ***
13802987-G-C 11682281-G-C DYZ17 ***
13802988-G-A 11682282-G-A DYZ17 ***
13803002-G-T 11682296-G-T DYZ17 ***
13803012-G-T 11682306-G-T DYZ17 ***
13650661-T-A 11494985-T-A DYZ17 ***
13805486-C-G 11684780-C-G DYZ17 ***
13841234-T-A 11720528-T-A DYZ17 ***
13862027-T-A 11741321-T-A DYZ17 ***
13864879-A-T 11744173-A-T DYZ17 ***
28800307-G-A 26654160-G-A ***
28800322-G-A 26654175-G-A FGC30407 ***
13862169-C-A 11741463-C-A DYZ17 ***
13458583-T-C 11302907-T-C ***
13843402-T-G 11722696-T-G DYZ17 ***
13843438-T-A 11722732-T-A DYZ17 ***
13862233-A-C 11741527-A-C DYZ17 ***
28784818-A-T 26638671-A-T ***
21316052-G-GC 19154166-G-GC ***
21316055-A-G 19154169-A-G ***
13666139-G-A 11510463-G-A DYZ17 ***
13867405-A-T 11746699-A-T DYZ17 ***
13658921-G-C 11503245-G-C DYZ17 ***
13663944-A-G 11508268-A-G DYZ17 ***
13664544-G-A 11508868-G-A DYZ17 ***
13664598-C-G 11508922-C-G DYZ17 ***
13664613-C-G 11508937-C-G DYZ17 ***
13804296-T-G 11683590-T-G DYZ17 ***
13804297-T-A 11683591-T-A DYZ17 ***
13813386-A-G 11692680-A-G FT228779 DYZ17 ***
13815081-A-T 11694375-A-T DYZ17 ***
13855065-A-T 11734359-A-T DYZ17 ***
13855084-T-A 11734378-T-A DYZ17 ***
13855091-T-G 11734385-T-G DYZ17 ***
13867716-G-A 11747010-G-A DYZ17 ***
13867721-C-G 11747015-C-G DYZ17 ***
13867726-G-C 11747020-G-C DYZ17 ***
13867782-C-G,T 11747076-C-G,T DYZ17 ***
25176881-G-T 23030734-G-T g1 ***
58844528-G-T 56746343-C-A ***
58980054-C-T 56833907-C-T ***
13841907-A-G 11721201-A-G DYZ17 ***
13684846-A-G 11529170-A-G DYZ17 ***
13652215-A-G 11496539-A-G DYZ17 ***
28785931-A-AAGTGG 26639784-A-AAGTGG ***
9945311-C-T 10107702-C-T ***
58975699-T-C 56829552-T-C ***
13402569-G-A 11246893-G-A ***
58977773-T-C 56831626-T-C ***
22254378-T-G 20092492-T-G DYZ19 ***
22254392-T-G 20092506-T-G DYZ19 ***
22254398-A-T 20092512-A-T BY46322 DYZ19 ***
20602133-C-CT 18440247-C-CT P5_Dst 10×T***
22254417-A-G 20092531-A-G FGC78609 DYZ19 ***
13824897-T-A 11704191-T-A DYZ17 ***
13659554-C-A 11503878-C-A DYZ17 ***
13829598-A-T 11708892-A-T DYZ17 ***
20602102-A-G 18440216-A-G P5_Dst ***
20602103-A-C 18440217-A-C P5_Dst ***
20602104-T-A 18440218-T-A P5_Dst ***
20602109-G-A 18440223-G-A P5_Dst ***
20602110-G-A 18440224-G-A P5_Dst ***
58974680-T-C 56828533-T-C ***
13804957-T-G 11684251-T-G DYZ17 ***
19036743-TA-T 16924863-TA-T ***
13803022-G-A 11682316-G-A DYZ17 ***
20602112-G-C 18440226-G-C P5_Dst ***
20602118-T-A 18440232-T-A P5_Dst ***
20602125-A-C 18440239-A-C P5_Dst ***
20602127-T-A 18440241-T-A P5_Dst ***
20602128-G-A 18440242-G-A P5_Dst ***
13459176-C-G 11303500-C-G ***
13453041-G-C,T 11297365-G-C,T ***
13804711-A-C 11684005-A-C DYZ17 ***
13858570-G-A 11737864-G-A DYZ17 ***
13858464-C-G,T 11737758-C-G,T DYZ17 ***
13472129-G-T 11316453-G-T ***
24192237-CAA-C 22046090-CAA-C P3_b1 22×A***
28800311-G-C 26654164-G-C ***
13140980-C-T 10630466-C-T ***
13448929-T-C 11293253-T-C ***
28800300-T-G 26654153-T-G ***
13853637-T-C 11732931-T-C DYZ17 ***
58975664-T-TTCCATTCCATTCCAG 56829517-T-TTCCATTCCATTCCAG ***
13936147-G-C 11815441-G-C ***
13936159-A-G 11815453-A-G ***
58974701-C-T 56828554-C-T ***
58974707-A-T 56828560-A-T ***
22250210-T-G 20088324-T-G DYZ19 ***
9654428-G-A 9816819-G-A IR3_Prx ***
9654435-G-A 9816826-G-A IR3_Prx ***
9937894-A-AT 10100285-A-AT ***
13142873-T-C 10632359-T-C ***
13402571-C-G 11246895-C-G ***
13448936-A-T 11293260-A-T ***
13448937-C-T 11293261-C-T ***
13458573-T-C 11302897-T-C ***
13648190-GGAAAA-G 11492514-GGAAAA-G DYZ17 ***
13654436-A-T 11498760-A-T DYZ17 ***
13663939-G-A 11508263-G-A FT447606 DYZ17 ***
13663946-T-A 11508270-T-A DYZ17 ***
13663950-A-G 11508274-A-G DYZ17 ***
13664578-G-A 11508902-G-A DYZ17 ***
13729179-A-G 11573503-A-G DYZ17 ***
13800548-G-T 11679842-G-T DYZ17 ***
13802733-A-G 11682027-A-G DYZ17 ***
13805007-T-G 11684301-T-G FGC78017FGC78017 DYZ17 ***
13805404-A-G 11684698-A-G DYZ17 ***
13805405-T-C 11684699-T-C DYZ17 ***
13805407-G-T 11684701-G-T DYZ17 ***
13809030-A-T 11688324-A-T DYZ17 ***
13809036-A-G 11688330-A-G DYZ17 ***
13809112-G-A,T 11688406-G-A,T DYZ17 ***
13809114-G-T 11688408-G-T DYZ17 ***
13809134-G-C 11688428-G-C DYZ17 ***
13809136-C-T 11688430-C-T DYZ17 ***
13809172-T-G 11688466-T-G DYZ17 ***
13809176-A-G 11688470-A-G DYZ17 ***
13809182-T-A 11688476-T-A DYZ17 ***
13809958-G-T 11689252-G-T DYZ17 ***
13815045-C-A 11694339-C-A DYZ17 ***
13815062-A-G 11694356-A-G DYZ17 ***
13815101-A-T 11694395-A-T DYZ17 ***
13818870-T-A 11698164-T-A DYZ17 ***
13820653-A-G 11699947-A-G DYZ17 ***
13820656-T-A 11699950-T-A DYZ17 ***
13821291-A-G 11700585-A-G DYZ17 ***
13821298-T-G 11700592-T-G DYZ17 ***
13833781-GGAGTT-G 11713075-GGAGTT-G DYZ17 ***
13837551-T-G 11716845-T-G DYZ17 ***
13838580-T-A 11717874-T-A DYZ17 ***
13845608-G-A,T 11724902-G-A,T DYZ17 ***
13855071-G-C 11734365-G-C DYZ17 ***
13855086-C-G 11734380-C-G DYZ17 ***
13855101-C-T 11734395-C-T DYZ17 ***
13863699-T-G 11742993-T-G DYZ17 ***
13867717-G-A 11747011-G-A DYZ17 ***
13868988-A-T 11748282-A-T DYZ17 ***
13936163-A-G 11815457-A-G ***
15498832-C-T 13386952-C-T ***
15498833-T-C 13386953-T-C ***
15498834-G-C 13386954-G-C ***
16345135-CTCTTCTTCTTCT-C,CT 14233255-CTCTTCTTCTTCT-C,CT 18×TCT***
22254389-T-G 20092503-T-G DYZ19 ***
22421063-C-T 20259177-C-T DYZ19 ***
22502932-G-A 20341046-G-A DYZ19 ***
23317649-C-CTT 21155763-C-CTT 37×T***
25343331-T-C 23197184-T-C P2_r1 ***
26529174-A-G 24383027-A-G P1_g2 ***
26529181-A-G 24383034-A-G P1_g2 ***
26946206-TAAA-T 24800059-TAAA-T P1_r3 25×A***
27810337-GGA-G 25664190-GGA-G P1_Y2 ***
28786616-A-G 26640469-A-G ***
28799832-GGATTA-G 26653685-GGATTA-G ***
28800316-C-T 26654169-C-T ***
58819384-ATTCCT-A 56771473-CGAAAG-C ***
58820540-T-C 56770331-A-G ***
58824723-T-C 56766148-A-G ***
58827223-G-T 56763648-C-A ***
58843030-GATTCCATTCCATTCT-G 56747815-AGGAATGGAATAGAAT-A ***
58876743-CTCATT-C,CCCATT 56714122-GAATGA-G,GAATGG ***
58908815-C-G 56682056-G-C ***
58972240-G-C 56826093-G-C 4×ATTCC***
58974311-A-C 56828164-A-C ***
58974666-G-C 56828519-G-C ***
58974675-T-C 56828528-T-C ***
58974681-G-C 56828534-G-C ***
58974684-T-C 56828537-T-C ***
58974686-C-G 56828539-C-G ***
58974693-T-C 56828546-T-C ***
58974696-G-C 56828549-G-C ***
58977790-C-T 56831643-C-T ***
58979527-T-A 56833380-T-A ***
58982300-T-C 56836153-T-C ***
58982941-C-T 56836794-C-T ***
59022350-G-A 56876203-G-A ******
25628439-CTT-C 23482292-CTT-C P1_b3 26×T***
19412006-GAGA-G 17300126-GAGA-G 14×AGAA***
13664424-A-C,G 11508748-A-C,G DYZ17 ***
13446680-C-T 11291004-C-T ***
16076204-T-C 13964324-T-C ***
21629397-G-GT 19467511-G-GT 9×T***
13868516-C-A,G 11747810-C-A,G DYZ17 ***
14393413-G-A 12272709-G-A ZS5037 ***
8399151-C-A 8531110-C-A ***
25096447-AG-A,AGGAAA 22950300-AG-A,AGGAAA g1 ***
13833485-A-G,T 11712779-A-G,T DYZ17 ***
13833497-T-A,G 11712791-T-A,G DYZ17 ***
58908843-C-CGCACT,T 56682028-G-A,AGTGCG 12×CCATT***
16948363-CTTT-C 14836483-CTTT-C 14×T***
17238338-G-A 15126458-G-A FT122189 ***
16692071-C-A 14580191-C-A 9×A***
8568465-GTTT-G 8700424-GTTT-G 22×T***
13474745-C-T 11319069-C-T ***
10808646-C-A ***
10776935-G-T ***
14093680-C-A 11972974-C-A ***
14765341-C-G 12653410-C-G ***
7196582-TTA-T 7328541-TTA-T ***
8428933-A-C 8560892-A-C ***
10799562-TTCTATTTCATTCCTC-T ***
13456726-C-A 11301050-C-A ***
13602701-C-A 11447025-C-A ***
7264897-C-T 7396856-C-T ***
10747118-T-A ***
7865897-C-T 7997856-C-T ***
11019241-C-A ***
14609823-A-ATAT 12498025-A-ATAT ***
14238412-CA-C,CAA 12117706-CA-C,CAA 12×A***
10808638-C-G ***
56707191-A-T ***
21100517-G-C 18938631-G-C ***
21100519-A-G 18938633-A-G ***
21285309-C-A 19123423-C-A ***
18401368-C-A 16289488-C-A P6_Gap ***
7994243-T-C 8126202-T-C Y85557 ***
13971609-G-GAGGAAA 11850903-G-GAGGAAA ***
15623438-G-A 13511558-G-A ***
7338736-C-A 7470695-C-A ***
13459545-C-GGGTTA 11303869-C-GGGTTA ***
22185542-G-A 20023656-G-A ***
17895175-ATTT-A,ATT 15783295-ATTT-A,ATT 21×T***
56734838-T-A ***
14144091-T-C 12023385-T-C ***
21127274-C-A 18965388-C-A ***
13521089-C-A 11365413-C-A ***
18940601-CA-C 16828721-CA-C ***
9962493-C-A 10124884-C-A ***
18659515-C-A 16547635-C-A ***
13473658-T-A 11317982-T-A ***
8053514-A-G 8185473-A-G ***
10664760-C-A ***
21888464-C-A 19726578-C-A ***
10808609-T-C ***
8644323-GCAA-G 8776282-GCAA-G ***
14312320-C-A 12191614-C-A ***
23274825-C-T 21112939-C-T ***
17012834-C-A 14900954-C-A ***
56763504-A-G ***
2832945-A-G 2964904-A-G ***
4293430-C-A 4425389-C-A ***
5186754-A-G 5318713-A-G 16×TG***
6857222-G-C 6989181-G-C ***
7172308-G-T 7304267-G-T ***
7215119-T-C 7347078-T-C ***
7667926-C-A 7799885-C-A ***
8053496-C-T 8185455-C-T FT179204 ***
8397456-T-C 8529415-T-C ***
8644213-C-A 8776172-C-A ***
8766342-G-T 8898301-G-T ***
9094856-T-A 9257247-T-A ***
9461121-C-A 9623512-C-A ***
9647683-C-A 9810074-C-A IR3_Prx ***
10662176-G-C,T ***
10746905-TTCAAC-T,TTCCAT ***
10782799-G-T ***
10795037-C-A FT399450 ***
10808631-C-T ***
10987851-TTCCATTCCATTCCACTCCAC-T,TTCCATTCCATTCCATTCCAC ***
11033229-T-A ***
11033231-C-T ***
11033239-G-A ***
13215631-C-A 11059955-C-A ***
13235129-C-A 11079453-C-A ***
13450109-CTCCACCCCATCCCATCCCATTCTATTCCAT-C,CTCCACCCCATTCCATTCCTTTCCATTCCAT 11294433-CTCCACCCCATCCCATCCCATTCTATTCCAT-C,CTCCACCCCATTCCATTCCTTTCCATTCCAT ***
13486166-C-A 11330490-C-A ***
13927855-A-G 11807149-A-G ***
14280236-C-CT 12159530-C-CT 9×T***
14303039-C-A 12182333-C-A ***
14409218-C-T 12288515-C-T ***
14600196-T-G 12488396-T-G ***
14824285-C-A 12712352-C-A ***
14831720-G-GT,GTT 12719787-G-GT,GTT 17×T***
15349885-C-A 13238004-C-A ***
15350069-C-A 13238188-C-A ***
15350097-C-A 13238216-C-A ***
15504029-C-A 13392149-C-A ***
15664007-C-T 13552127-C-T FGC57630 ***
15785731-T-C 13673851-T-C ***
16057973-A-T 13946093-A-T ***
16283998-C-A 14172118-C-A ***
16342660-G-A 14230780-G-A ***
16458638-C-A 14346758-C-A ***
16539758-G-A 14427878-G-A ***
16781535-T-C 14669655-T-C ***
16789767-C-A 14677887-C-A ***
16861183-C-A 14749303-C-A ***
17090563-G-A 14978683-G-A ***
17155958-T-C 15044078-T-C ***
17201760-TTC-T,TTT 15089880-TTC-T,TTT ***
17246704-C-A 15134824-C-A ***
17603049-C-A 15491169-C-A ***
17887553-ATT-A 15775673-ATT-A 10×T***
18178103-A-G 16066223-A-G ***
18266776-A-AT 16154896-A-AT ***
18758039-C-A 16646159-C-A ***
18965922-A-G 16854042-A-G ***
19039737-C-A 16927857-C-A ***
19066244-C-A 16954364-C-A ***
19109817-C-T 16997937-C-T ***
19266816-C-A 17154936-C-A ***
21100529-A-G 18938643-A-G ***
21163211-C-A 19001325-C-A ***
21296885-A-G 19134999-A-G ***
21354079-T-G 19192193-T-G ***
21929598-GTG-G,GTA 19767712-GTG-G,GTA ***
22540424-T-A 20378538-T-A ***
22594672-G-C 20432786-G-C ***
22817990-C-A 20656104-C-A ***
22839135-A-G 20677249-A-G ***
22968105-A-G 20806219-A-G ***
23833281-A-G 21671395-A-G ***
28517152-C-A 26371005-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.