Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > ZZ45 > Z36/S206 > Y17161 > Y16889 > Y16884 > Y16885 > A8033

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
89212
BigY2
89212
BigY3
89212
Manual
Edits
19979420-G-C 17867540-G-C P5_Prx ***A*
18451149-A-T 16339269-A-T P6_Dst A*
21398901-T-A 19237015-T-A Y56628 YY++**
21400412-G-A 19238526-G-A Y56632 YY+++
23165947-C-T 21004061-C-T Y58851 Y+++
23280870-C-T 21118984-C-T Y58987 YY+++
22352537-T-C 20190651-T-C DYZ19 **
13800986-TAGAAAA-T 11680280-TAGAAAA-T DYZ17 **
13800946-T-A 11680240-T-A DYZ17 **
17081287-AAAT-A 14969407-AAAT-A **
22662303-C-T 20500417-C-T **
28781380-C-A 26635233-C-A **
19202749-T-C 17090869-T-C **
19202750-G-A 17090870-G-A **
22507260-A-C 20345374-A-C DYZ19 ****
15556765-C-T 13444885-C-T FT111437 **
28617703-T-G 26471556-T-G **
17802156-T-A 15690276-T-A **
18147551-G-T 16035671-G-T **
14030217-C-T 11909511-C-T **
26376467-C-A 24230320-C-A P1_Y1 **
7201558-C-T 7333517-C-T **
10841999-C-CGCTCA **
22788550-C-A 20626664-C-A FT97203 **
16980-A-T **
26563223-G-A 24417076-G-A P1_g2 **
17367661-C-A 15255781-C-A **
10847906-C-A **
13485858-C-A 11330182-C-A **
25985389-T-TC 23839242-T-TC P1_Y1 **
4778585-C-A 4910544-C-A **
6756901-T-C 6888860-T-C **
11004460-C-T **
26075709-G-A 23929562-G-A P1_Y1 **
8058501-C-A 8190460-C-A **
10828776-G-T **
27952124-TATATAC-T 25805977-TATATAC-T P1_Y2 **
8850331-C-A 8982290-C-A **
20784371-T-TC 18622485-T-TC P4_Prx **
23066262-T-C 20904376-T-C **
11010608-C-G **
11030391-C-A **
15946601-C-A 13834721-C-A **
19202765-C-CAAA 17090885-C-CAAA 17×A**
21880870-A-C 19718984-A-C **
28755674-C-A 26609527-C-A **
6329685-T-TC 6461644-T-TC IR3_Dst **
15285822-C-A 13173921-C-A **
10763403-T-C **
6981288-C-A 7113247-C-A **
22165184-C-A 20003298-C-A **
22165192-G-A 20003306-G-A **
28521607-C-A 26375460-C-A **
10669399-C-A **
28555663-C-A 26409516-C-A **
13405057-C-A 11249381-C-A **
14266996-C-A 12146290-C-A **
16121685-A-AC 14009805-A-AC P8_Prx **
9110270-C-A **
14443108-A-G 12322381-A-G **
6092207-C-A 6224166-C-A **
23397174-G-A 21235288-G-A **
6233754-T-A 6365713-T-A IR3_Dst **
18422816-C-A 16310936-C-A P6_Gap **
7939295-C-A 8071254-C-A **
15423283-G-A 13311403-G-A **
6401535-C-A 6533494-C-A **
14147006-C-A 12026300-C-A **
6984755-C-A 7116714-C-A **
28570441-C-A 26424294-C-A **
23825101-T-C 21663215-T-C **
2682732-C-A 2814691-C-A **
2783541-C-A 2915500-C-A **
2792973-G-A 2924932-G-A **
2792978-T-A 2924937-T-A **
2792982-A-T 2924941-A-T **
2833218-T-C 2965177-T-C **
2907155-A-G 3039114-A-G **
2907157-A-G 3039116-A-G **
2907159-T-A 3039118-T-A **
2926410-G-A 3058369-G-A **
2926411-A-C 3058370-A-C **
2926417-C-T 3058376-C-T **
2926419-A-T 3058378-A-T **
2949530-C-A 3081489-C-A **
2949596-T-G 3081555-T-G **
3467343-C-A 3599302-C-A **
3621425-G-T 3753384-G-T **
3650164-C-A 3782123-C-A **
3790912-AT-A 3922871-AT-A **
3851329-G-T 3983288-G-T **
3853113-G-T 3985072-G-T **
3866028-T-C 3997987-T-C **
3866034-T-G 3997993-T-G **
3866036-A-T 3997995-A-T **
4075801-T-C 4207760-T-C **
4088852-C-A 4220811-C-A **
4094549-C-A 4226508-C-A **
4129176-C-A 4261135-C-A **
4141656-C-A 4273615-C-A **
4141704-A-T 4273663-A-T **
4141708-C-A 4273667-C-A **
4141709-A-C 4273668-A-C **
4226102-G-T 4358061-G-T **
4299029-C-A 4430988-C-A **
4557614-G-T 4689573-G-T **
4557617-G-C 4689576-G-C **
4557622-C-T 4689581-C-T **
4557640-C-T 4689599-C-T **
4703095-GA-G 4835054-GA-G 8×A**
4732275-C-A 4864234-C-A **
4778539-A-G 4910498-A-G **
4862787-C-T 4994746-C-T **
4899615-C-A 5031574-C-A **
4905620-CA-C 5037579-CA-C 9×A**
4918860-C-T 5050819-C-T **
4929219-A-T 5061178-A-T **
4958472-G-T 5090431-G-T **
4969975-G-T 5101934-G-T **
5133291-G-T 5265250-G-T **
5133425-T-G 5265384-T-G **
5187007-C-T 5318966-C-T **
5187051-A-C 5319010-A-C **
5240897-C-A 5372856-C-A **
5293952-C-A 5425911-C-A **
5393267-GAGT-G 5525226-GAGT-G **
5448720-A-G 5580679-A-G **
5467435-G-T 5599394-G-T **
5524229-C-G 5656188-C-G **
5524231-C-G 5656190-C-G **
5524233-T-G 5656192-T-G **
5524247-T-G 5656206-T-G **
5524249-G-A 5656208-G-A **
5536116-T-C 5668075-T-C **
5638395-G-T 5770354-G-T **
5747576-G-T 5879535-G-T FT364735 **
5800238-C-A 5932197-C-A **
5858501-C-A 5990460-C-A **
5870067-C-T 6002026-C-T **
6080055-G-T 6212014-G-T **
6086006-C-A 6217965-C-A **
6148035-T-C 6279994-T-C IR3_Dst **
6241152-CACACA-C 6373111-CACACA-C IR3_Dst **
6268600-T-G 6400559-T-G IR3_Dst **
6268602-T-A 6400561-T-A IR3_Dst **
6268604-T-G 6400563-T-G IR3_Dst **
6268618-T-G 6400577-T-G IR3_Dst **
6268620-T-G 6400579-T-G IR3_Dst **
6268617-CTT-C 6400576-CTT-C IR3_Dst **
6268627-G-GAC 6400586-G-GAC IR3_Dst **
6352726-G-T 6484685-G-T **
6359700-T-C 6491659-T-C **
6426963-A-T 6558922-A-T **
6632981-T-A 6764940-T-A **
6712468-G-T 6844427-G-T **
6926363-C-A 7058322-C-A **
6930478-C-A 7062437-C-A **
6948325-C-A 7080284-C-A **
6978420-A-T 7110379-A-T **
7028844-C-A 7160803-C-A **
7103522-A-C 7235481-A-C **
7128262-G-T 7260221-G-T **
7132127-C-A 7264086-C-A **
7133991-C-A 7265950-C-A **
7160797-C-A 7292756-C-A **
7165531-C-G 7297490-C-G **
7165538-T-G 7297497-T-G **
7181772-C-A 7313731-C-A **
7231483-TTC-T 7363442-TTC-T **
7247995-A-T 7379954-A-T **
7252292-C-A 7384251-C-A **
7263798-C-A 7395757-C-A **
7269760-T-C 7401719-T-C **
7295819-G-T 7427778-G-T **
7306295-TA-T 7438254-TA-T **
7311958-C-A 7443917-C-A **
7334047-C-G 7466006-C-G **
7334056-G-A 7466015-G-A **
7359903-T-A 7491862-T-A **
7360554-T-C 7492513-T-C **
7374099-C-G 7506058-C-G **
7374840-A-G 7506799-A-G **
7374846-G-T 7506805-G-T PR914 **
7374849-G-T 7506808-G-T **
7374862-T-C 7506821-T-C **
7374864-A-C 7506823-A-C **
7458652-G-T 7590611-G-T IR1_L **
7471098-G-T 7603057-G-T IR1_L **
7534609-C-A 7666568-C-A **
7534613-C-A 7666572-C-A **
7534629-C-G 7666588-C-G **
7603263-C-A 7735222-C-A **
7832399-T-G 7964358-T-G **
7832401-C-G 7964360-C-G **
7894639-G-T 8026598-G-T **
7939333-C-A 8071292-C-A **
8080521-C-A 8212480-C-A **
8166886-G-T 8298845-G-T **
8230586-C-A 8362545-C-A **
8274101-C-T 8406060-C-T **
8568487-TGC-T 8700446-TGC-T **
8672058-G-A 8804017-G-A **
8734958-G-A 8866917-G-A **
8822720-C-A 8954679-C-A **
8827345-C-A 8959304-C-A **
8897200-G-C 9029159-G-C **
8897203-T-C 9029162-T-C **
8897218-T-TTCAGCC 9029177-T-TTCAGCC **
8907575-C-T 9039534-C-T **
8907598-C-A 9039557-C-A **
9057591-G-A **
9110268-T-A **
9110272-C-G **
9110291-T-G **
9110295-T-A **
9113886-C-A **
8983132-T-C 9145523-T-C **
9140149-A-C 9302540-A-C **
9171547-G-T 9333938-G-T **
9171553-G-T 9333944-G-T **
9183594-C-T 9345985-C-T **
9416778-C-T 9579169-C-T **
9462016-G-A 9624407-G-A **
9465333-T-C 9627724-T-C **
9482448-C-A 9644839-C-A **
9514164-C-A 9676555-C-A **
9639086-G-A 9801477-G-A IR3_Prx **
9639099-T-A 9801490-T-A IR3_Prx **
9639100-G-T 9801491-G-T IR3_Prx **
9639105-T-A 9801496-T-A IR3_Prx **
9697046-G-T 9859437-G-T IR3_Prx **
9735771-C-T 9898162-C-T IR3_Prx **
9764204-G-T 9926595-G-T **
9865187-T-C 10027578-T-C FTB54462 **
9865188-G-A 10027579-G-A **
9865193-T-C 10027584-T-C **
9964449-G-T 10126840-G-T **
9975126-A-C 10137517-A-C **
9975129-C-A 10137520-C-A **
10024906-C-A 10187297-C-A **
10051393-A-T 10213784-A-T **
10051394-C-A 10213785-C-A **
10051397-A-C 10213788-A-C **
10051402-T-C 10213793-T-C **
10051403-T-C 10213794-T-C **
10051416-T-G 10213807-T-G **
10051418-T-C 10213809-T-C **
10051420-T-A 10213811-T-A **
10068780-C-A 10231171-C-A A3763 **
10068782-T-G 10231173-T-G **
10068796-T-G 10231187-T-G **
10068798-C-G 10231189-C-G **
10068805-C-G 10231196-C-G **
10647676-A-G **
10664840-A-T **
10669368-C-T **
10669369-C-G **
10669380-A-C **
10669393-C-CCCTACACTA **
10677503-T-C **
10679410-C-T **
10687669-C-T **
10693346-C-A **
10693948-C-A **
10694100-C-A **
10748331-C-A **
10750022-A-T **
10750028-A-T **
10750035-C-G **
10750045-C-G **
10750059-T-C **
10750087-C-A **
10757908-T-TC **
10759948-T-C **
10763065-C-CCACCA **
10763397-C-A **
10763408-G-GC **
10763419-G-A **
10767695-C-A **
10767741-C-A **
10768087-C-T **
10768578-G-C **
10769580-C-G **
10769719-C-A **
10773432-C-A **
10779100-C-A **
10781663-C-T **
10803382-GTTCCA-G **
10813029-C-A **
10840911-G-T **
10841960-A-C **
10847447-C-T **
10850472-C-T **
10859316-A-G **
10860106-C-A **
10875765-C-A **
10895379-T-A **
10901668-A-G **
10903789-G-T **
10925436-A-T **
10925450-G-A FT436757 **
10935541-C-A **
10935564-T-TTCCAC **
10940406-C-A **
10941461-C-A **
10972288-C-A **
10983632-C-A **
10983642-C-T **
10983645-C-T **
10983667-C-G **
10983680-C-T **
10984282-C-A **
10987462-TCCA-T **
10996307-G-T **
11000180-C-T **
11010309-C-A **
11010583-C-A **
11018813-A-T **
11025301-T-G **
11030291-T-TTACTTCAG **
11030296-TCAC-T **
11030365-C-G **
11030370-C-G **
11030393-T-C **
11030408-T-G **
11030411-T-G **
11030413-C-T **
11030414-G-T **
11030459-T-A **
11033786-C-G **
11033788-C-G **
11033791-C-G **
11037780-T-C **
11038055-C-A **
13212589-C-A 11056913-C-A **
13255492-G-A 11099816-G-A **
13255515-A-T 11099839-A-T **
13306291-G-T 11150615-G-T **
13306345-G-C 11150669-G-C **
13306358-C-A 11150682-C-A **
13317846-C-A 11162170-C-A **
13322320-C-A 11166644-C-A **
13324708-C-A 11169032-C-A **
13445526-G-C 11289850-G-C **
13466035-T-A 11310359-T-A **
13466051-T-G 11310375-T-G **
13466054-C-T 11310378-C-T **
13468182-G-A 11312506-G-A **
13468184-A-G 11312508-A-G **
13469568-T-G 11313892-T-G **
13488697-C-G 11333021-C-G **
13488699-A-G 11333023-A-G **
13582888-C-A 11427212-C-A **
13595684-G-T 11440008-G-T **
13614294-C-A 11458618-C-A **
13627246-C-A 11471570-C-A **
13642874-T-C 11487198-T-C **
13642875-G-A 11487199-G-A **
13642891-G-A 11487215-G-A **
13726151-C-G 11570475-C-G DYZ17 **
13726157-A-T 11570481-A-T DYZ17 **
11648333-T-A DYZ17 **
11650931-G-A DYZ17 **
11653910-C-A DYZ17 **
11668827-T-A DYZ17 **
11673602-G-A FT406671 DYZ17 **
13866799-G-A 11746093-G-A DYZ17 **
13871406-T-C 11750700-T-C **
13872833-A-T 11752127-A-T FTB45249 **
13890997-T-G 11770291-T-G **
13891999-C-A 11771293-C-A **
13895132-G-T 11774426-G-T **
13996021-C-G 11875315-C-G **
13999284-A-T 11878578-A-T **
14014995-G-T 11894289-G-T **
14050556-C-A 11929850-C-A **
14050826-C-G 11930120-C-G **
14093490-A-T 11972784-A-T **
14099968-C-T 11979262-C-T **
14106881-G-T 11986175-G-T **
14143925-C-A 12023219-C-A **
14143964-A-C 12023258-A-C **
14143970-G-T 12023264-G-T **
14183363-C-A 12062657-C-A **
14195885-G-C 12075179-G-C **
14195898-A-T 12075192-A-T **
14219608-A-G 12098902-A-G **
14219613-G-A 12098907-G-A **
14219629-G-C 12098923-G-C **
14219630-G-A 12098924-G-A **
14219632-G-T 12098926-G-T **
14219637-C-T 12098931-C-T **
14219638-T-C 12098932-T-C **
14219650-G-C 12098944-G-C **
14219651-C-G 12098945-C-G **
14219659-G-C 12098953-G-C **
14238471-T-G 12117765-T-G **
14273778-G-T 12153072-G-T **
14301856-T-C 12181150-T-C **
14301858-A-C 12181152-A-C **
14347963-C-A 12227258-C-A **
14359810-T-A 12239105-T-A **
14405822-C-A 12285119-C-A **
14409045-G-T 12288342-G-T **
14409048-T-A 12288345-T-A **
14445579-C-A 12324852-C-A **
14458092-C-A 12337365-C-A **
14458416-C-A 12337689-C-A **
14508655-A-G 12396860-A-G **
14525395-G-C 12413596-G-C **
14526765-T-G 12414966-T-G **
14526769-A-G 12414970-A-G FGC76335 **
14526782-T-A 12414983-T-A **
14526785-C-G 12414986-C-G FTA10786 **
14526791-T-C 12414992-T-C **
14526792-C-A 12414993-C-A **
14557395-TG-T 12445596-TG-T **
14594701-AT-A 12482901-AT-A 8×T**
14721485-C-T 12609553-C-T **
14721486-T-A 12609554-T-A **
14721489-G-A 12609557-G-A **
14721492-A-C 12609560-A-C **
14721494-G-C 12609562-G-C **
14721508-G-C 12609576-G-C **
14721510-T-A 12609578-T-A **
14721512-A-T 12609580-A-T **
14754094-TGA-T 12642163-TGA-T **
14964535-G-T 12852610-G-T **
15104881-C-A 12992969-C-A **
15146332-C-A 13034419-C-A **
15161091-G-T 13049177-G-T **
15171385-A-G 13059471-A-G **
15259221-C-A 13147305-C-A **
15374549-C-A 13262669-C-A **
15394384-A-G 13282504-A-G **
15394403-C-A 13282523-C-A **
15397756-A-G 13285876-A-G **
15401919-C-G 13290039-C-G **
15446816-A-G 13334936-A-G **
15447135-A-G 13335255-A-G **
15447137-A-G 13335257-A-G **
15447139-T-A 13335259-T-A **
15499491-G-A 13387611-G-A **
15527778-T-C 13415898-T-C **
15558165-AT-A 13446285-AT-A **
15631974-A-T 13520094-A-T **
15712260-G-T 13600380-G-T **
15741193-G-A 13629313-G-A **
15775882-A-G 13664002-A-G **
15798272-C-T 13686392-C-T **
15866229-T-A 13754349-T-A **
16000953-C-A 13889073-C-A **
16021882-C-CA 13910002-C-CA **
16035631-A-T 13923751-A-T **
16041277-T-A 13929397-T-A **
16046327-G-T 13934447-G-T **
16062998-T-C 13951118-T-C **
16121682-A-T 14009802-A-T P8_Prx **
16121684-G-C 14009804-G-C P8_Prx 9×A**
16148214-A-T 14036334-A-T P8_Dst **
16214534-C-A 14102654-C-A **
16214536-A-G 14102656-A-G **
16214552-T-A 14102672-T-A **
16214560-C-A 14102680-C-A **
16284259-T-G 14172379-T-G **
16284263-A-G 14172383-A-G **
16284277-C-A 14172397-C-A **
16340147-GAAAA-G 14228267-GAAAA-G 22×A**
16412309-C-A 14300429-C-A **
16430379-C-A 14318499-C-A **
16458309-T-A 14346429-T-A **
16468810-G-A 14356930-G-A **
16504978-G-T 14393098-G-T **
16620260-C-T 14508380-C-T **
16704804-G-T 14592924-G-T **
16717279-A-G 14605399-A-G **
16745149-A-G 14633269-A-G **
16745154-T-A 14633274-T-A **
16745170-G-C 14633290-G-C **
16745172-T-C 14633292-T-C **
16750077-T-C 14638197-T-C **
16777738-C-A 14665858-C-A **
16829810-C-A 14717930-C-A **
16866086-C-A 14754206-C-A **
16931507-G-A 14819627-G-A **
17000330-GA-G 14888450-GA-G **
17004519-C-T 14892639-C-T **
17004556-C-A 14892676-C-A **
17053307-C-A 14941427-C-A **
17224456-C-A 15112576-C-A **
17259308-C-A 15147428-C-A **
17270695-T-C 15158815-T-C **
17374500-G-T 15262620-G-T **
17413344-C-A 15301464-C-A **
17440292-C-T 15328412-C-T **
17455960-C-A 15344080-C-A **
17479931-G-A 15368051-G-A **
17479954-G-T 15368074-G-T **
17498829-C-A 15386949-C-A **
17538997-T-C 15427117-T-C **
17545535-G-T 15433655-G-T **
17637766-A-C 15525886-A-C **
17637780-C-T 15525900-C-T **
17637784-C-T 15525904-C-T **
17638230-C-A 15526350-C-A ZS11020 **
17774963-G-T 15663083-G-T **
17794304-T-C 15682424-T-C Y138578 **
17802163-CAGTAA-C 15690283-CAGTAA-C **
17849977-A-T 15738097-A-T **
17947008-C-G 15835128-C-G **
17981972-C-A 15870092-C-A **
18088505-C-A 15976625-C-A **
18106781-C-A 15994901-C-A **
18147537-TGA-T 16035657-TGA-T **
18185218-T-C 16073338-T-C **
18187411-A-G 16075531-A-G **
18188109-C-T 16076229-C-T **
18218858-G-A 16106978-G-A **
18379803-A-T 16267923-A-T P6_Prx **
18379805-A-T 16267925-A-T P6_Prx **
18379820-A-G 16267940-A-G P6_Prx **
18379869-T-TA 16267989-T-TA P6_Prx **
18379871-T-TAG 16267991-T-TAG P6_Prx **
18429197-A-AGAGAT 16317317-A-AGAGAT P6_Dst **
18513325-A-AG 16401445-A-AG P6_Dst **
18659839-A-AAT 16547959-A-AAT **
18739555-C-A 16627675-C-A **
18748733-G-T 16636853-G-T **
18764482-A-G 16652602-A-G **
18789540-A-C 16677660-A-C **
18789544-A-G 16677664-A-G **
18789547-T-G 16677667-T-G **
18789549-A-T 16677669-A-T **
18789565-T-A 16677685-T-A **
18906470-C-A 16794590-C-A **
18924916-C-T 16813036-C-T **
18980554-C-T 16868674-C-T **
18994448-C-A 16882568-C-A **
19062103-C-A 16950223-C-A **
19075599-C-A 16963719-C-A **
19078960-A-G 16967080-A-G **
19117332-C-A 17005452-C-A **
19122137-T-C 17010257-T-C **
19125273-G-T 17013393-G-T **
19127622-C-A 17015742-C-A **
19129506-G-T 17017626-G-T **
19155367-G-T 17043487-G-T **
19187671-C-T 17075791-C-T **
19275331-T-C 17163451-T-C **
19275345-C-G 17163465-C-G **
19275350-T-G 17163470-T-G **
19361285-C-A 17249405-C-A 4×AAAT**
19444116-C-A 17332236-C-A **
19451856-C-A 17339976-C-A **
19459143-G-A 17347263-G-A **
19459145-C-A 17347265-C-A **
19461231-A-G 17349351-A-G **
19463863-G-T 17351983-G-T **
19482330-T-G 17370450-T-G **
19678497-C-A 17566617-C-A P5_Prx **
19678518-CCCCCTT-C 17566638-CCCCCTT-C P5_Prx **
19748898-A-G 17637018-A-G P5_Prx **
19748903-A-AG 17637023-A-AG P5_Prx **
19795125-T-A 17683245-T-A P5_Prx **
19795141-A-G 17683261-A-G P5_Prx **
20434788-T-C 18272902-T-C P5_Dst **
20557766-A-T 18395880-A-T P5_Dst **
20712416-G-A 18550530-G-A FT452803 P4_Prx **
20784304-A-G 18622418-A-G P4_Prx **
20784306-G-A 18622420-G-A P4_Prx **
20784319-A-C 18622433-A-C P4_Prx **
20784325-A-G 18622439-A-G P4_Prx **
20840999-C-A 18679113-C-A P4_Gap **
20875151-G-T 18713265-G-T P4_Dst **
20875153-C-A 18713267-C-A P4_Dst 10×T**
20875154-T-TA 18713268-T-TA P4_Dst **
20875168-A-G 18713282-A-G P4_Dst **
20875170-T-A 18713284-T-A P4_Dst **
20875173-A-G 18713287-A-G P4_Dst **
20875177-A-T 18713291-A-T P4_Dst **
21037268-T-C 18875382-T-C **
21037293-G-C 18875407-G-C **
21072441-C-A 18910555-C-A **
21125679-C-A 18963793-C-A FT161282 **
21185107-C-A 19023221-C-A **
21220804-C-A 19058918-C-A **
21225157-C-A 19063271-C-A **
21245763-C-A 19083877-C-A **
21299403-C-A 19137517-C-A **
21316957-C-A 19155071-C-A **
21383319-T-A 19221433-T-A **
21383424-A-G 19221538-A-G **
21409426-G-T 19247540-G-T **
21444529-C-A 19282643-C-A **
21446290-TTAGC-T 19284404-TTAGC-T **
21459902-C-A 19298016-C-A **
21462632-T-C 19300746-T-C **
21526995-C-A 19365109-C-A **
21544851-T-G 19382965-T-G **
21602772-G-C 19440886-G-C **
21602800-T-A 19440914-T-A **
21623802-A-C 19461916-A-C **
21708307-C-A 19546421-C-A **
21839981-A-AT 19678095-A-AT **
21899830-C-A 19737944-C-A **
21911250-A-G 19749364-A-G **
21944789-A-T 19782903-A-T **
21944795-A-C 19782909-A-C **
21944797-C-T 19782911-C-T **
21944798-A-T 19782912-A-T **
21944811-G-C 19782925-G-C **
21944813-C-T 19782927-C-T **
21944815-A-C 19782929-A-C **
21946450-C-A 19784564-C-A **
21996146-C-A 19834260-C-A **
22008296-A-C 19846410-A-C **
22008300-A-C 19846414-A-C **
22008303-A-T 19846417-A-T **
22008305-C-T 19846419-C-T **
22008306-A-C 19846420-A-C **
22008319-A-T 19846433-A-T **
22008321-G-C 19846435-G-C **
22008323-A-T 19846437-A-T **
22076175-C-A 19914289-C-A **
22133061-TA-T 19971175-TA-T **
22165187-A-G 20003301-A-G **
22165201-T-C 20003315-T-C **
22172614-A-G 20010728-A-G **
22172615-A-AT 20010729-A-AT **
22190621-TTC-T 20028735-TTC-T **
22190632-T-A 20028746-T-A MF2676 **
22446124-CT-C 20284238-CT-C DYZ19 **
22537125-C-A 20375239-C-A **
22662329-A-T 20500443-A-T **
22777928-G-T 20616042-G-T **
22864490-A-G 20702604-A-G **
22970092-G-A 20808206-G-A **
22993331-C-A 20831445-C-A **
23044190-C-A 20882304-C-A **
23066218-G-C 20904332-G-C **
23066222-G-T 20904336-G-T **
23066224-T-C 20904338-T-C Y23969 **
23066266-G-C 20904380-G-C **
23066269-A-C 20904383-A-C **
23066272-G-C 20904386-G-C **
23066287-T-C 20904401-T-C **
23066289-A-T 20904403-A-T **
23189596-C-A 21027710-C-A **
23198902-T-G 21037016-T-G **
23198906-A-T 21037020-A-T **
23198920-G-A 21037034-G-A **
23199725-TC-T 21037839-TC-T **
23202909-C-A 21041023-C-A **
23338889-G-A 21177003-G-A **
23435921-C-A 21274035-C-A **
23459608-C-A 21297722-C-A **
23623242-G-T 21461356-G-T **
23789309-T-A 21627423-T-A **
23789311-T-A 21627425-T-A **
23789313-T-A 21627427-T-A BY66411FT26828 **
23789326-T-G 21627440-T-G **
23789327-T-G 21627441-T-G **
23789329-T-A 21627443-T-A **
23789332-T-G 21627446-T-G **
23789335-T-A 21627449-T-A **
23825104-C-T 21663218-C-T **
23832958-G-A 21671072-G-A **
23832962-T-A 21671076-T-A **
23838776-C-T 21676890-C-T **
23952880-T-C 21806733-T-C **
24148069-T-C 22001922-T-C P3_b1 **
24250366-T-TC 22104219-T-TC P3_b1 **
24378523-C-A 22232376-C-A **
24406957-G-T 22260810-G-T **
24841461-A-G 22695314-A-G IR1_R **
25918857-T-TC 23772710-T-TC P1_Y1 **
26170596-A-G 24024449-A-G P1_Y1 **
26376424-G-T 24230277-G-T P1_Y1 **
26563217-T-G 24417070-T-G P1_g2 **
26563234-G-A 24417087-G-A P1_g2 **
27339027-C-G 25192880-C-G P1_g3 **
27339029-G-T 25192882-G-T P1_g3 **
27339031-A-T 25192884-A-T P1_g3 **
27398509-T-A 25252362-T-A P1_g3 **
27546538-C-G 25400391-C-G P1_Y2 **
27546869-C-T 25400722-C-T P1_Y2 **
27739886-T-A 25593739-T-A P1_Y2 **
27739909-A-G 25593762-A-G P1_Y2 **
27739950-C-G 25593803-C-G P1_Y2 **
27739952-A-T 25593805-A-T P1_Y2 **
27829294-C-A 25683147-C-A P1_Y2 **
27862505-G-T 25716358-G-T P1_Y2 **
27866070-C-A 25719923-C-A P1_Y2 10×T**
27866071-T-TA 25719924-T-TA P1_Y2 **
27866084-A-G 25719937-A-G P1_Y2 **
27866087-A-G 25719940-A-G P1_Y2 **
27866090-T-G 25719943-T-G P1_Y2 **
27866094-T-G 25719947-T-G P1_Y2 **
28243704-G-GGA 26097557-G-GGA P1_b4 **
28498014-T-C 26351867-T-C **
28588855-A-G 26442708-A-G **
28605934-C-A 26459787-C-A **
28621366-G-T 26475219-G-T **
28623225-C-A 26477078-C-A **
28657624-C-G 26511477-C-G **
28666388-C-A 26520241-C-A **
28734706-C-T 26588559-C-T **
28734750-A-C 26588603-A-C **
28734773-C-T 26588626-C-T **
28734775-C-T 26588628-C-T **
28734777-T-C 26588630-T-C **
28771642-A-G 26625495-A-G **
28772886-G-A 26626739-G-A **
56750051-A-G **
56750053-A-T **
56750071-G-T **
56750074-A-G **
56750078-A-G **
56858199-C-G **
24302805-A-C 22156658-A-C P3_t1 **
13222596-G-T 11066920-G-T **
24290536-T-C 22144389-T-C P3_t1 **
9967561-TGTTGA-T 10129952-TGTTGA-T ***
13447881-T-C 11292205-T-C ***
22722362-TG-T 20560476-TG-T ***
9211352-AAC-A 9373743-AAC-A 22×AC***
13686885-A-G 11531209-A-G DYZ17 ***
13662093-T-G 11506417-T-G DYZ17 ***
16107441-A-T 13995561-A-T P8_Prx ***
22420181-C-T 20258295-C-T DYZ19 ***
58973946-T-A 56827799-T-A ***
24107681-AG-A 21961534-AG-A P3_b1 ***
25524691-TTC-T 23378544-TTC-T P1_gr1 ***
58975654-G-GTCCAT,T 56829507-G-GTCCAT,T 4×TCCAT***
13866330-GAACCTAGTGT-G 11745624-GAACCTAGTGT-G DYZ17 ***
19438509-A-G 17326629-A-G ***
13600363-G-GA 11444687-G-GA ***
13600369-G-T 11444693-G-T BY86645 ***
13452843-C-G 11297167-C-G ***
13652928-A-G 11497252-A-G DYZ17 ***
28808462-G-A 26662315-G-A ***
13384608-G-A 11228932-G-A ***
13648111-GAATGT-G 11492435-GAATGT-G DYZ17 ***
13862155-G-A 11741449-G-A DYZ17 ***
13857408-T-G 11736702-T-G DYZ17 ***
13706482-C-T 11550806-C-T BY89234 DYZ17 ***
13706487-A-G 11550811-A-G BY89235 DYZ17 ***
13706490-T-A 11550814-T-A DYZ17 ***
13706491-A-T 11550815-A-T DYZ17 ***
17946897-G-T 15835017-G-T ***
20213073-T-C 18051187-T-C P5_Dst ***
13842790-ATCAACCTGAG-A 11722084-ATCAACCTGAG-A DYZ17 ***
13706495-C-T 11550819-C-T PF7440 DYZ17 ***
13600372-C-G 11444696-C-G ***
20698169-G-T 18536283-G-T P4_Prx ***
13437597-A-T 11281921-A-T ***
6376944-G-T 6508903-G-T ***
6376945-G-T 6508904-G-T ***
9307398-TTGTGTGTG-T,TTGAGT 9469789-TTGTGTGTG-T,TTGAGT 15×TG***
10018549-T-A 10180940-T-A ***
10032040-C-A 10194431-C-A ***
10032062-C-T 10194453-C-T ***
13809889-G-A 11689183-G-A DYZ17 ***
13866327-A-G 11745621-A-G DYZ17 ***
22427315-GGTGTTATGTCCAGAGTTT-G 20265429-GGTGTTATGTCCAGAGTTT-G DYZ19 ***
58978984-TCCATG-T 56832837-TCCATG-T ***
10772446-C-T ***
24430032-C-A 22283885-C-A ***
28369982-T-A 26223835-T-A P1_gr2 17×TA***
10763380-C-T ***
2750639-G-T 2882598-G-T ***
3620849-A-G 3752808-A-G ***
4547745-T-A 4679704-T-A ***
7866974-C-A 7998933-C-A ***
8398833-T-C 8530792-T-C ***
8913683-G-T 9045642-G-T ***
8983352-G-T 9145743-G-T ***
8994022-C-A 9156413-C-A ***
9771054-ATTTTT-A,ATT 9933445-ATTTTT-A,ATT 16×T***
10664594-C-CCATTTCAAGT ***
10664602-T-G ***
10744896-C-A ***
10763320-C-T ***
10763328-T-A ***
10763331-C-A ***
10763351-A-G ***
10763356-A-T ***
10795124-C-A ***
10801703-A-C ***
10878696-T-C ***
11019108-C-A ***
13212649-C-A 11056973-C-A ***
13468017-A-G 11312341-A-G ***
13468033-G-A 11312357-G-A ***
13487128-G-A 11331452-G-A ***
11656459-G-T DYZ17 ***
11660157-A-T DYZ17 ***
11675629-C-A DYZ17 ***
13854927-A-G 11734221-A-G DYZ17 ***
13860374-G-T 11739668-G-T DYZ17 ***
13999764-G-T 11879058-G-T ***
16066583-T-C 13954703-T-C ***
16226406-C-A 14114526-C-A Y95655 ***
16569863-C-A 14457983-C-A ***
16707438-A-G 14595558-A-G ***
17860217-G-T 15748337-G-T ***
17911865-A-G 15799985-A-G ***
18263245-C-T 16151365-C-T ***
18596424-C-A 16484544-C-A ***
19109800-C-A 16997920-C-A ***
21495340-A-G 19333454-A-G FT232252 ***
21752665-C-T ***
24872034-G-T 22725887-G-T IR1_R ***
56829958-CACTCT-C ***
3403261-CAAAAA-C,CA 3535220-CAAAAA-C,CA 30×A***
4101978-C-G 4233937-C-G ***
4983203-G-T 5115162-G-T ***
13448025-CCATTCCA-C 11292349-CCATTCCA-C ***
17143891-ATTTTTT-A,ATT 15032011-ATTTTTT-A,ATT 35×T***
27390557-G-T 25244410-G-T P1_g3 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Mutation Notes:

Kit POSITION-REF-ALT (hg19) POSITION-REF-ALT (hg38) Note
Manual16187685-T-C14075805-T-C10C
Manual19683099-G-C17571219-G-C11G 6C
Manual24984559-T-C22838412-T-C116C 314T 1G