Cronin

FTDNA: 207196, FGC-BigY: BMTAB
MDKA Birth: Ireland

Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z46375 > DF106 > DF104 > DF105 > A259 > Y19870 > FGC5939 > FGC36497

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
207196		FGC-BigY
BMTAB
9200888-A-C 9363279-A-C BY20586 Y+***
23157943-G-A 20996057-G-A FGC36501 Y++
16692154-G-T 14580274-G-T FGC36498 YY++
22249533-C-A 20087647-C-A DYZ19 +***
2847102-C-G 2979061-C-G **
14228888-C-A 12108182-C-A **
8399151-C-A 8531110-C-A **
5200190-C-A 5332149-C-A **
10023763-T-G 10186154-T-G **
18247338-C-T 16135458-C-T MF4837 **
7438521-G-T 7570480-G-T **
9461406-C-A 9623797-C-A **
14142124-G-A 12021418-G-A *****
22219821-C-G 20057935-C-G DYZ19 *****
22221899-T-A 20060013-T-A Z29688 DYZ19 *****
18094245-G-T 15982365-G-T Y101261 **
16620439-C-A 14508559-C-A **
18650689-C-A 16538809-C-A **
17482426-T-TG 15370546-T-TG **
8181442-G-A 8313401-G-A **
17313380-C-A 15201500-C-A **
8160162-C-A 8292121-C-A **
28467368-G-T 26321221-G-T **
17482422-A-C 15370542-A-C **
8095292-A-G 8227251-A-G **
8988684-C-A 9151075-C-A **
4279807-C-A 4411766-C-A **
14459934-C-A 12339207-C-A **
8095284-C-T 8227243-C-T **
23205017-C-A 21043131-C-A **
14638993-C-A 12527062-C-A **
22193085-C-T 20031199-C-T Y4027 FGC3948 **
16688454-C-A 14576574-C-A **
21954550-C-A 19792664-C-A **
5204514-G-A 5336473-G-A **
21709307-C-A 19547421-C-A **
13225948-C-A 11070272-C-A **
8237322-A-ATGC 8369281-A-ATGC **
16021162-C-A 13909282-C-A **
13642831-C-A 11487155-C-A **
6771489-A-T 6903448-A-T **
15786092-T-G 13674212-T-G **
15290293-C-A 13178392-C-A **
23625375-C-A 21463489-C-A **
24517999-C-A 22371852-C-A **
21068275-G-T 18906389-G-T **
18195204-C-G 16083324-C-G **
9932101-C-A 10094492-C-A **
7524600-G-C 7656559-G-C **
19449080-C-A 17337200-C-A **
21416647-C-A 19254761-C-A **
19465939-A-G 17354059-A-G **
13440828-C-A 11285152-C-A **
14180664-C-A 12059958-C-A **
9940641-C-T 10103032-C-T **
14216376-T-C 12095670-T-C **
8095260-TAC-T 8227219-TAC-T **
24502305-G-T 22356158-G-T ***
24868664-G-T 22722517-G-T P3_b2 ***
24470722-C-A 22324575-C-A ***
24553287-G-A 22407140-G-A P3_t2 ***
24795822-A-G 22649675-A-G P3_b2 ***
24760651-G-A 22614504-G-A P3_b2 ***
24794523-T-G 22648376-T-G P3_b2 ***
24553288-T-G 22407141-T-G P3_t2 ***
24761115-C-A 22614968-C-A P3_b2 ***
24718869-C-A 22572722-C-A P3_b2 ***
24643210-C-T 22497063-C-T P3_t2 ***
24658495-C-T 22512348-C-T P3_b2 ***
24672697-C-A 22526550-C-A P3_b2 ***
24673383-C-T 22527236-C-T P3_b2 ***
24673400-A-C 22527253-A-C P3_b2 ***
24723460-G-T 22577313-G-T P3_b2 ***
24719653-C-A 22573506-C-A P3_b2 ***
24677562-A-G 22531415-A-G P3_b2 ***
24718880-C-A 22572733-C-A P3_b2 ***
24695520-A-C 22549373-A-C P3_b2 ***
22300841-G-A 20138955-G-A DYZ19 ***
25356980-A-C 23210833-A-C P2_r2 ***
24876215-C-A 22730068-C-A g1 ***
25709539-A-T 23563392-A-T P1_b3 ***
25502354-T-A 23356207-T-A P1_gr1 ***
25513301-T-A 23367154-T-A P1_gr1 ***
25592747-T-G 23446600-T-G P1_gr1 ***
25631142-G-T 23484995-G-T P1_b3 ***
25660625-G-T 23514478-G-T P1_b3 ***
25684243-C-A 23538096-C-A P1_b3 ***
25699403-T-A 23553256-T-A P1_b3 ***
25709540-C-T 23563393-C-T P1_b3 ***
25489676-T-G 23343529-T-G P2_r2 ***
25896994-T-G 23750847-T-G P1_Y1 ***
26046002-C-T 23899855-C-T P1_Y1 13×T***
26147089-T-G 24000942-T-G P1_Y1 ***
26275829-G-A 24129682-G-A P1_Y1 ***
26283209-C-A 24137062-C-A P1_Y1 21×A***
26283251-C-T 24137104-C-T P1_Y1 ***
26341194-C-A 24195047-C-A P1_Y1 ***
26344140-G-A 24197993-G-A P1_Y1 ***
25491420-T-G 23345273-T-G P2_r2 ***
25469014-A-G 23322867-A-G P2_r2 ***
24885988-C-A 22739841-C-A g1 ***
24233657-G-T 22087510-G-T P3_b1 ***
24890211-A-C 22744064-A-C g1 ***
24987792-A-C 22841645-A-C g1 ***
25078333-A-C 22932186-A-C g1 ***
25103767-T-C 22957620-T-C g1 ***
25104198-C-A 22958051-C-A g1 ***
25200631-A-C 23054484-A-C g1 ***
25246434-T-C 23100287-T-C P2_r1 ***
25256636-G-T 23110489-G-T P2_r1 15×T***
25417441-G-A 23271294-G-A P2_r2 ***
25465295-G-T 23319148-G-T P2_r2 ***
25417467-A-G 23271320-A-G P2_r2 ***
25417479-A-T 23271332-A-T P2_r2 ***
25427321-A-G 23281174-A-G P2_r2 ***
25427340-A-C 23281193-A-C P2_r2 ***
25428305-A-G 23282158-A-G P2_r2 ***
25438321-G-T 23292174-G-T P2_r2 ***
25439685-C-A 23293538-C-A P2_r2 ***
25447211-A-G 23301064-A-G P2_r2 ***
24421925-C-A 22275778-C-A ***
23411427-T-G 21249541-T-G ***
24036260-C-A 21890113-C-A ***
22041008-C-G 19879122-C-G ***
21381521-A-G 19219635-A-G ***
21514123-G-T 19352237-G-T FGC59542 ***
21651158-T-C 19489272-T-C ***
21677524-C-A 19515638-C-A ***
21694897-T-G 19533011-T-G ***
21915723-G-T 19753837-G-T ***
22041006-T-A 19879120-T-A ***
22079768-G-T 19917882-G-T ***
21164655-G-T 19002769-G-T ***
22079796-A-C 19917910-A-C ***
22135510-A-G 19973624-A-G ***
22135600-C-A 19973714-C-A ***
22199494-G-T 20037608-G-T ***
22205383-C-A 20043497-C-A ***
22205545-T-G 20043659-T-G ***
22222734-A-T 20060848-A-T DYZ19 ***
22248408-T-C 20086522-T-C DYZ19 ***
21346320-C-A 19184434-C-A ***
21153797-C-A 18991911-C-A ***
22266144-C-T 20104258-C-T DYZ19 ***
20739009-C-A 18577123-C-A P4_Prx ***
20134588-C-G 18022708-C-G P5_Dst ***
20211813-A-T 18049927-A-T P5_Dst ***
20253924-C-T 18092038-C-T P5_Dst ***
20430889-G-T 18269003-G-T P5_Dst ***
20535848-A-G 18373962-A-G P5_Dst ***
20654071-C-A 18492185-C-A P4_Prx ***
20716961-T-A 18555075-T-A P4_Prx ***
20809706-C-A 18647820-C-A P4_Gap ***
21013146-A-G 18851260-A-G P4_Dst ***
20897537-C-A 18735651-C-A P4_Dst ***
20933477-G-T 18771591-G-T P4_Dst ***
20947350-T-A 18785464-T-A P4_Dst ***
20970373-C-A 18808487-C-A P4_Dst ***
20982336-T-G 18820450-T-G P4_Dst ***
20989214-G-T 18827328-G-T P4_Dst ***
20998252-G-A 18836366-G-A P4_Dst ***
21013122-T-G 18851236-T-G P4_Dst ***
22250184-T-A 20088298-T-A A3962 DYZ19 ***
22294453-G-T 20132567-G-T DYZ19 ***
24035043-G-T 21888896-G-T ***
23465946-T-G 21304060-T-G ***
22903609-C-A 20741723-C-A ***
23041099-G-T 20879213-G-T ***
23049640-A-G 20887754-A-G ***
23185882-T-G 21023996-T-G ***
23264128-C-A 21102242-C-A ***
23401439-C-A 21239553-C-A ***
26463168-C-T 24317021-C-T P1_Y1 ***
23472088-C-A 21310202-C-A ***
22798075-G-T 20636189-G-T ***
23703039-A-C 21541153-A-C ***
23732079-A-G 21570193-A-G ***
23745367-G-T 21583481-G-T ***
23807462-C-A 21645576-C-A ***
23875232-C-A 21713346-C-A ***
23965930-C-A 21819783-C-A ***
24026744-G-T 21880597-G-T ***
24033072-C-T 21886925-C-T ***
22801545-G-T 20639659-G-T ***
22768181-C-A 20606295-C-A ***
22306789-T-C 20144903-T-C DYZ19 ***
22470484-C-A 20308598-C-A DYZ19 ***
22309923-T-C 20148037-T-C DYZ19 ***
22317634-C-G 20155748-C-G A17963 DYZ19 ***
22327662-T-A 20165776-T-A DYZ19 ***
22341600-C-A 20179714-C-A DYZ19 ***
22341607-A-T 20179721-A-T DYZ19 ***
22358169-G-T 20196283-G-T DYZ19 ***
22360219-G-A 20198333-G-A DYZ19 ***
22452363-G-T 20290477-G-T DYZ19 ***
22473036-A-G 20311150-A-G DYZ19 ***
22629737-C-A 20467851-C-A ***
22490179-T-G 20328293-T-G DYZ19 ***
22529509-T-C 20367623-T-C ***
22529511-C-G 20367625-C-G ***
22529513-T-C 20367627-T-C ***
22529521-A-G 20367635-A-G ***
22529530-G-A 20367644-G-A ***
22529533-T-G 20367647-T-G ***
22624528-C-A 20462642-C-A ***
26440416-T-A 24294269-T-A P1_Y1 ***
26991227-T-A 24845080-T-A P1_r4 ***
26529444-A-T 24383297-A-T P1_g2 ***
19682115-TGAGT-AGAGA 17570235-TGAGT-AGAGA P5_Prx ***
13859832-TTA-CTG 11739126-TTA-CTG ***
13867011-TCTGGAAT-ATTGAAC 11746305-TCTGGAAT-ATTGAAC ***
14819044-TTTG-T 12707111-C-CT ***
14960052-AC-A 12848127-AC-A ***
14960069-AT-CC 12848144-AT-CC ***
16651433-CTTTTTTTT-C 14539553-CTTTTTTTT-C 16×T***
18369777-TGGGC-GGGGG 16257897-TGGGC-GGGGG P6_Prx ***
19857576-CAA-C 17745696-CAA-C P5_Prx 15×A***
13858727-ATCGACTG-TTA 11738021-ATCGACTG-TTA ***
20084453-TTTC-T 17972573-TTTC-T P5_Dst ***
20087764-GAAA-G 17975884-GAAA-G P5_Dst 13×A***
20194043-ACAGAAAATTTCCACTTTCAATAAT-A 18032157-ACAGAAAATTTCCACTTTCAATAAT-A P5_Dst ***
20243496-A-AAGACAG 18081610-A-AAGACAG P5_Dst ***
20386768-GAA-G 18224882-GAA-G P5_Dst 15×A***
20420418-G-GGC 18258532-G-GGC P5_Dst ***
22258239-GCTC-CATA 20096353-GCTC-CATA DYZ19 ***
22301626-TATG-GATT 20139740-TATG-GATT DYZ19 ***
13859374-GG-CA 11738668-GG-CA ***
13858689-TGAATGG-CGTATGA 11737983-TGAATGG-CGTATGA ***
22325261-TCAC-ACAG 20163375-TCAC-ACAG DYZ19 ***
13745438-TA-AG 11589762-TA-AG ***
13140531-TT-AC 10630017-TT-AC ***
13141762-GCCATT-G 10631248-GCCATT-G 11×CCATT***
13196436-CC-AT 11040760-CC-AT ***
13461081-GAGT-TAGC 11305405-GAGT-TAGC ***
13474007-ACGTA-GGGTT 11318331-ACGTA-GGGTT ***
13474044-TCA-CCT 11318368-TCA-CCT ***
13488792-CCCG-GCGT 11333116-CCCG-GCGT ***
13740782-GGAATGGATTGGAATA-G 11585106-GGAATGGATTGGAATA-G ***
13799078-CT-AA 11678372-CT-AA ***
13857834-TGGGCTCG-CAGGCTCA 11737128-TGGGCTCG-CAGGCTCA ***
13809728-AT-GG 11689022-AT-GG ***
13809768-GGAG-CGAA 11689062-GGAG-CGAA ***
13809794-AAGTG-GAGTA 11689088-AAGTG-GAGTA ***
13835287-ATG-TTA 11714581-ATG-TTA ***
13841390-AAATG-GAATC 11720684-AAATG-GAATC ***
13857606-GACTT-TACTC 11736900-GACTT-TACTC ***
13857660-TTC-GGT 11736954-TTC-GGT ***
13857674-TGTAT-CGTAA 11736968-TGTAT-CGTAA ***
22311597-ATA-T 20149711-ATA-T DYZ19 ***
22325282-GG-AT 20163396-GG-AT DYZ19 ***
10023666-T-TTCTC 10186057-T-TTCTC ***
28160822-CT-C 26014675-CT-C P1_b4 22×T***
27275611-A-ACTGT 25129464-A-ACTGT P1_g3 ***
27313118-A-AT 25166971-A-AT P1_g3 9×T***
27375800-A-AT 25229653-A-AT P1_g3 19×T***
27423019-CT-C 25276872-CT-C P1_g3 ***
27717576-AAAC-A 25571429-AAAC-A P1_Y2 5×AAC***
27964040-GT-G 25817893-GT-G P1_Y2 ***
27981744-A-AT 25835597-A-AT P1_Y2 10×T***
28086347-AT-A 25940200-AT-A P1_Y2 ***
28360493-A-AT 26214346-A-AT P1_gr2 ***
27152434-CT-C 25006287-CT-C P1_g3 ***
28707806-GT-G 26561659-GT-G 8×T***
58827280-CAATT-TAATA 56763587-AATTG-TATTA ***
58978993-G-CTCCATTCCAC 56832846-G-CTCCATTCCAC ***
58979342-CTA-C 56833195-CTA-C ***
58986189-CT-GC 56840042-CT-GC ***
59008782-T-TG 56862635-T-TG ***
59030570-T-TAATATAA 56884423-T-TAATATAA ***
13826145-A-AGGAATGGAAT 11705439-A-AGGAATGGAAT 10×GGAAT***
27160261-CT-C 25014114-CT-C P1_g3 ***
27148404-TTTTTACC-T 25002257-TTTTTACC-T P1_g3 ***
23114014-AATATATAT-A 20952128-AATATATAT-A 22×AT***
25368167-T-TTCTG 23222020-T-TTCTG P2_r2 ***
24029677-CCAATACATGACTAACTTACAACTTAAA-C 21883530-CCAATACATGACTAACTTACAACTTAAA-C ***
24044810-T-TTCTG 21898663-T-TTCTG ***
24270917-AT-A 22124770-AT-A P3_b1 19×T***
24673369-TA-T 22527222-TA-T P3_b2 10×A***
24681972-CA-C 22535825-CA-C P3_b2 ***
24736119-C-CA 22589972-C-CA P3_b2 11×A***
24763477-T-TTG 22617330-T-TTG P3_b2 19×TG***
24837250-GT-G 22691103-GT-G P3_b2 17×T***
25402857-CT-C 23256710-CT-C P2_r2 20×T***
27082211-AG-A 24936064-AG-A P1_r4 ***
25427336-T-TTCTG 23281189-T-TTCTG P2_r2 ***
25443656-ATTTTTCCCTGTTCAGTATGATGTTGGTTG-A 23297509-ATTTTTCCCTGTTCAGTATGATGTTGGTTG-A P2_r2 ***
26197268-G-GT 24051121-G-GT P1_Y1 11×T***
26283226-AAAAAG-A 24137079-AAAAAG-A P1_Y1 ***
26344165-GAAC-TAAA 24198018-GAAC-TAAA P1_Y1 ***
26529450-CTT-C 24383303-CTT-C P1_g2 16×T***
26992907-GTT-G 24846760-GTT-G P1_r4 24×T***
27016312-TA-T 24870165-TA-T P1_r4 ***
10023749-GTGCTTG-CTGCCTA 10186140-GTGCTTG-CTGCCTA ***
10016081-AA-C 10178472-AA-C ***
26543086-A-G 24396939-A-G P1_g2 ***
27313777-C-A 25167630-C-A P1_g3 ***
27130489-G-T 24984342-G-T P1_g3 ***
27134979-T-C 24988832-T-C P1_g3 ***
27149091-T-A 25002944-T-A P1_g3 ***
27151035-C-A 25004888-C-A P1_g3 ***
27151197-C-G 25005050-C-G P1_g3 ***
27184853-G-A 25038706-G-A P1_g3 ***
27265878-A-T 25119731-A-T P1_g3 ***
27299373-A-C 25153226-A-C P1_g3 ***
27330106-G-T 25183959-G-T P1_g3 ***
27080563-G-T 24934416-G-T P1_r4 ***
27339871-G-T 25193724-G-T P1_g3 ***
27359752-A-T 25213605-A-T P1_g3 ***
27375797-A-T 25229650-A-T P1_g3 ***
27638400-A-C 25492253-A-C P1_Y2 ***
27729474-A-G 25583327-A-G P1_Y2 ***
27733600-C-A 25587453-C-A P1_Y2 ***
27780493-A-T 25634346-A-T P1_Y2 ***
27841119-T-C 25694972-T-C P1_Y2 ***
27130403-T-G 24984256-T-G P1_g3 ***
27062911-G-T 24916764-G-T P1_r4 ***
27867009-G-T 25720862-G-T P1_Y2 ***
26900200-T-A 24754053-T-A P1_r3 ***
26547268-T-G 24401121-T-G P1_g2 ***
26780844-C-A 24634697-C-A P1_g2 ***
26809317-T-G 24663170-T-G P1_g2 ***
26874010-A-G 24727863-A-G P1_r3 ***
26874035-G-T 24727888-G-T P1_r3 ***
26874036-T-G 24727889-T-G P1_r3 ***
26880333-A-G 24734186-A-G P1_r3 ***
26900194-G-A 24754047-G-A P1_r3 ***
26900210-C-T 24754063-C-T P1_r3 ***
27056841-G-T 24910694-G-T P1_r4 ***
26902792-A-G 24756645-A-G P1_r3 ***
26928106-G-T 24781959-G-T P1_r3 ***
19772486-T-G 17660606-T-G P5_Prx ***
26991245-G-A 24845098-G-A P1_r4 ***
26991264-G-A 24845117-G-A P1_r4 ***
27011417-C-T 24865270-C-T P1_r4 12×T***
27016181-G-A 24870034-G-A P1_r4 ***
27016317-G-A 24870170-G-A P1_r4 ***
27861129-C-T 25714982-C-T P1_Y2 ***
27937827-A-C 25791680-A-C P1_Y2 ***
9985945-CGAGT-TGAGA 10148336-CGAGT-TGAGA ***
13461089-TC-AG 11305413-TC-AG ***
58989990-A-G 56843843-A-G ***
58996588-A-C 56850441-A-C ***
58996947-G-C 56850800-G-C ***
58996957-T-C 56850810-T-C ***
58996962-A-G 56850815-A-G ***
58996996-C-T 56850849-C-T ***
58997011-T-G 56850864-T-G ***
13488730-ACCG-GCCA 11333054-ACCG-GCCA ***
58990081-AT-GG 56843934-AT-GG ***
58988604-T-C 56842457-T-C ***
22268251-CTT-GTC 20106365-CTT-GTC DYZ19 ***
17632593-A-TT 15520713-A-TT ***
6863818-CTTTTTTT-C 6995777-CTTTTTTT-C 21×T***
7196046-CTTTTT-C 7328005-CTTTTT-C 16×T***
9930054-AA-TG 10092445-AA-TG ***
9944061-TAG-GAT 10106452-TAG-GAT ***
9944146-CA-TG 10106537-CA-TG ***
9944736-CCCAG-TCCAA 10107127-CCCAG-TCCAA ***
58989963-C-T 56843816-C-T ***
58985029-C-T 56838882-C-T ***
28031764-T-C 25885617-T-C P1_Y2 ***
28624544-C-A 26478397-C-A ***
28160848-C-T 26014701-C-T P1_b4 ***
28170285-A-C 26024138-A-C P1_b4 ***
28236557-G-T 26090410-G-T P1_b4 ***
28478809-C-A 26332662-C-A ***
28544470-G-T 26398323-G-T ***
28545811-C-A 26399664-C-A ***
28556236-T-G 26410089-T-G ***
28605796-C-A 26459649-C-A ***
28687963-C-A 26541816-C-A ***
58905397-A-C 56685474-T-G ***
28703328-C-T 26557181-C-T ***
28767773-T-G 26621626-T-G ***
28780171-A-G 26634024-A-G ***
28813728-G-T 26667581-G-T ***
58827401-T-C 56763470-A-G ***
58840925-C-A 56749946-G-T ***
58848272-G-A 56742599-C-T ***
58858934-C-T 56731937-G-A ***
19989751-T-A 17877871-T-A P5_Prx ***
18956190-C-A 16844310-C-A ***
19749309-C-T 17637429-C-T P5_Prx 22×T***
7282384-G-A 7414343-G-A ***
7217293-T-C 7349252-T-C ***
7217294-G-T 7349253-G-T ***
7224884-T-C 7356843-T-C ***
7234819-G-A 7366778-G-A ***
7242725-C-A 7374684-C-A BY15485BY183855 ***
7282381-G-C 7414340-G-C ***
7282383-T-C 7414342-T-C ***
7363147-A-G 7495106-A-G ***
7200069-T-C 7332028-T-C ***
7499721-G-T 7631680-G-T IR1_L ***
7608436-C-T 7740395-C-T S10396 15×CT***
7636509-C-A 7768468-C-A ***
7646620-A-G 7778579-A-G ***
7699861-A-G 7831820-A-G ***
7723537-A-C 7855496-A-C ***
7723539-T-C 7855498-T-C ***
7723540-G-A 7855499-G-A ***
7209915-A-C 7341874-A-C ***
7171953-C-T 7303912-C-T ***
7776539-C-A 7908498-C-A ***
6822569-C-A 6954528-C-A ***
6105245-C-A 6237204-C-A ***
6367393-G-T 6499352-G-T ***
6493508-C-A 6625467-C-A ***
6619534-C-A 6751493-C-A ***
6666229-C-A 6798188-C-A ***
6749669-T-G 6881628-T-G ***
6756059-A-G 6888018-A-G ***
6839668-A-G 6971627-A-G ***
7108508-G-T 7240467-G-T ***
6854318-A-C 6986277-A-C ***
6917006-C-A 7048965-C-A ***
6945866-C-A 7077825-C-A ***
6953355-C-A 7085314-C-A ***
7013631-G-T 7145590-G-T ***
7028793-G-T 7160752-G-T ***
7076351-C-A 7208310-C-A ***
7098157-T-G 7230116-T-G ***
7756276-C-A 7888235-C-A ***
7898762-G-T 8030721-G-T ***
5690577-T-G 5822536-T-G ***
9803917-T-C 9966308-T-C ***
9602721-A-T 9765112-A-T IR3_Prx ***
9605319-T-A 9767710-T-A IR3_Prx ***
9605690-C-A 9768081-C-A IR3_Prx ***
9627417-G-T 9789808-G-T IR3_Prx ***
9769065-C-A 9931456-C-A ***
9769066-T-C 9931457-T-C ***
9769077-A-C 9931468-A-C ***
9907450-G-T 10069841-G-T ***
9524434-G-T 9686825-G-T ***
9927295-A-C 10089686-A-C ***
9927317-A-C 10089708-A-C ***
9930046-G-A 10092437-G-A ***
9944762-C-T 10107153-C-T ***
9950974-C-T 10113365-C-T ***
9952147-C-A 10114538-C-A ***
9993528-G-T 10155919-G-T ***
10024321-C-A 10186712-C-A ***
9529206-C-G 9691597-C-G IR3_Prx ***
9353744-G-C 9516135-G-C ***
8079605-C-A 8211564-C-A ***
8848325-G-T 8980284-G-T ***
8095266-C-T 8227225-C-T ***
8110004-T-G 8241963-T-G ***
8178947-C-A 8310906-C-A ***
8276198-C-A 8408157-C-A ***
8407304-C-A 8539263-C-A ***
8799657-A-T 8931616-A-T ***
8806927-C-A 8938886-C-A ***
8911767-G-T 9043726-G-T ***
9343806-G-C 9506197-G-C ***
9025145-C-G 9187536-C-G FGC38889 ***
9040921-A-T 9203312-A-T ***
9046901-C-A 9209292-C-A ***
9055613-T-A 9218004-T-A ***
9111609-C-T 9274000-C-T ***
9222809-C-T 9385200-C-T ***
9235818-A-G 9398209-A-G ***
9318546-T-C 9480937-T-C ***
6062782-G-T 6194741-G-T ***
5495120-A-T 5627079-A-T ***
10091763-A-C 10254154-A-C Y89584 ***
10068734-A-G 10231125-A-G ***
24655973-T-G 22509826-T-G P3_b2 ***
26538295-C-T 24392148-C-T P1_g2 ***
13866779-AG-CA 11746073-AG-CA ***
13799090-CA-TG 11678384-CA-TG ***
27033094-CC-TT 24886947-CC-TT P1_r4 ***
58976804-TTCCACTG-CTCCACTT 56830657-TTCCACTG-CTCCACTT ***
9930146-C-A 10092537-C-A ***
13196396-A-G 11040720-A-G ***
13962138-A-T 11841432-A-T ***
22301071-A-C 20139185-A-C DYZ19 ***
59030475-C-CAAAA 56884328-C-CAAAA ***
19682103-T-A 17570223-T-A P5_Prx ***
22248403-C-T 20086517-C-T FGC80349 DYZ19 ***
26440434-C-T 24294287-C-T P1_Y1 ***
26880358-A-T 24734211-A-T P1_r3 ***
22300778-GGC-AGT 20138892-GGC-AGT DYZ19 ***
22300832-AGG-GGT 20138946-AGG-GGT DYZ19 ***
20845485-T-A 18683599-T-A P4_Dst ***
10023774-T-TCC 10186165-T-TCC ***
9602730-T-G 9765121-T-G IR3_Prx ***
10023749-G-C 10186140-G-C ***
22224676-T-C 20062790-T-C DYZ19 ***
13743812-T-A 11588136-T-A ***
26141303-GC-G 23995156-GC-G P1_Y1 11×C***
28103949-CT-C 25957802-CT-C P1_Y2 22×T***
22224654-T-G 20062768-T-G DYZ19 ***
22422606-C-A 20260720-C-A DYZ19 ***
17426011-C-CCTTTTCTTTT 15314131-C-CCTTTTCTTTT 11×CTTTT***
13474008-C-G,T 11318332-C-G,T ***
22317240-T-G 20155354-T-G DYZ19 ***
10023755-G-A 10186146-G-A ***
9519812-TTTTCTTTCTTTCTTTC-T 9682203-TTTTCTTTCTTTCTTTC-T 17×TTTC***
22224731-C-T 20062845-C-T DYZ19 ***
59030571-TTTAT-AATATA 56884424-TTTAT-AATATA ***
28556230-T-G 26410083-T-G ***
27335305-AAAAT-A 25189158-AAAAT-A P1_g3 5×AAAT***
22368407-T-A 20206521-T-A DYZ19 ***
13706115-TATGG-T 11550439-TATGG-T 4×ATGGA***
58975737-CCAT-ACAC 56829590-CCAT-ACAC ***
26991241-G-T 24845094-G-T P1_r4 ***
5204487-T-A 5336446-T-A ***
3389890-C-A 3521849-C-A ***
2881324-G-T 3013283-G-T ***
2882581-C-A 3014540-C-A ***
2905926-C-A 3037885-C-A ***
3032666-C-A 3164625-C-A ***
3032870-C-A 3164829-C-A ***
3330495-C-A 3462454-C-A ***
3343220-A-G 3475179-A-G ***
3544885-C-A 3676844-C-A ***
2762115-G-T 2894074-G-T ***
4101121-C-A 4233080-C-A ***
4215595-C-T 4347554-C-T ***
4217624-T-A 4349583-T-A ***
4282482-C-A 4414441-C-A ***
4425438-T-G 4557397-T-G ***
4665830-A-G 4797789-A-G ***
4889516-C-A 5021475-C-A ***
4957647-C-A 5089606-C-A ***
2773507-A-C 2905466-A-C ***
2762111-G-T 2894070-G-T ***
13712739-G-C 11557063-G-C ***
10056876-C-T 10219267-C-T ***
13688382-C-A 11532706-C-A ***
22317328-G-C 20155442-G-C DYZ19 ***
24831481-A-G 22685334-A-G P3_b2 ***
10068695-AAGTTTC-TAGGTTA 10231086-AAGTTTC-TAGGTTA ***
9930134-G-A 10092525-G-A ***
9940681-G-A 10103072-G-A ***
9944749-T-C 10107140-T-C ***
22360187-C-T 20198301-C-T BY160831 DYZ19 ***
5865287-G-A 5997246-G-A ***
22429825-C-A 20267939-C-A DYZ19 ***
58976126-A-G 56829979-A-G ***
10065357-A-C 10227748-A-C ***
24421903-C-A 22275756-C-A ***
19479757-C-A 17367877-C-A V4159 ***
58988613-T-C 56842466-T-C ***
24450500-G-A 22304353-G-A ***
13860194-C-A 11739488-C-A ***
10056860-G-T 10219251-G-T ***
10097080-C-A 10259471-C-A ***
19649783-T-C 17537903-T-C P5_Prx ***
17385614-T-A 15273734-T-A ***
17085878-C-A 14973998-C-A ***
17090734-T-C 14978854-T-C ***
17100321-C-A 14988441-C-A ***
17206667-C-A 15094787-C-A ***
17215822-C-A 15103942-C-A ***
17342932-C-A 15231052-C-A ***
17363140-C-A 15251260-C-A ***
17482427-T-C 15370547-T-C ***
16909248-C-A 14797368-C-A ***
17503936-C-A 15392056-C-A ***
17544723-C-A 15432843-C-A ***
17584196-T-G 15472316-T-G ***
17589157-G-T 15477277-G-T ***
17597763-C-A 15485883-C-A ***
17666593-A-T 15554713-A-T ***
17666619-C-A 15554739-C-A ***
17739740-C-A 15627860-C-A ***
17058662-A-C 14946782-A-C ***
16906865-A-C 14794985-A-C ***
17920931-G-A 15809051-G-A ***
16438029-C-A 14326149-C-A ***
16056233-G-A 13944353-G-A ***
16104472-A-T 13992592-A-T P8_Prx ***
16184306-C-A 14072426-C-A ***
16245028-C-A 14133148-C-A ***
16320469-C-A 14208589-C-A ***
16320479-C-A 14208599-C-A ***
16336057-A-G 14224177-A-G ***
16462719-A-C 14350839-A-C ***
16906858-G-T 14794978-G-T ***
16464466-C-A 14352586-C-A ***
16474633-T-C 14362753-T-C ***
16475280-G-T 14363400-G-T ***
16488019-C-G 14376139-C-G ***
16581275-C-A 14469395-C-A ***
16651918-A-C 14540038-A-C ***
16705518-C-A 14593638-C-A ***
16833433-G-T 14721553-G-T ***
17850016-T-G 15738136-T-G ***
18020813-C-A 15908933-C-A ***
16038965-C-A 13927085-C-A ***
19184016-T-G 17072136-T-G ***
19071793-C-A 16959913-C-A ***
19075591-C-A 16963711-C-A ***
19126405-G-A 17014525-G-A ***
19126417-G-A 17014537-G-A ***
19132538-C-A 17020658-C-A ***
19161077-C-A 17049197-C-A ***
19168485-C-A 17056605-C-A ***
19201087-C-A 17089207-C-A ***
19007783-C-A 16895903-C-A ***
19202750-G-A 17090870-G-A ***
19202751-C-T 17090871-C-T ***
19202758-A-T 17090878-A-T ***
19300239-C-T 17188359-C-T ***
19410150-C-A 17298270-C-A ***
19583796-A-C 17471916-A-C P5_Prx ***
19591323-G-T 17479443-G-T P5_Prx ***
19631020-G-T 17519140-G-T P5_Prx ***
19043470-C-A 16931590-C-A ***
18956222-A-G 16844342-A-G ***
18191308-C-A 16079428-C-A ***
18580546-G-T 16468666-G-T ***
18255932-C-A 16144052-C-A ***
18270175-C-A 16158295-C-A ***
18321367-A-T 16209487-A-T P6_Prx ***
18370937-C-G 16259057-C-G P6_Prx ***
18390021-C-T 16278141-C-T P6_Gap ***
18480095-G-A 16368215-G-A P6_Dst ***
18554433-C-A 16442553-C-A ***
18650710-C-A 16538830-C-A ***
18933857-T-C 16821977-T-C ***
18701720-C-A 16589840-C-A ***
18718805-C-A 16606925-C-A ***
18748787-C-A 16636907-C-A ***
18857733-C-A 16745853-C-A ***
18857791-G-T 16745911-G-T ***
18900636-C-A 16788756-C-A ***
18901039-C-A 16789159-C-A ***
18906238-T-A 16794358-T-A ***
16042850-C-A 13930970-C-A ***
15811358-A-G 13699478-A-G ***
13229686-C-A 11074010-C-A ***
14048856-G-A 11928150-G-A ***
13739833-T-G 11584157-T-G ***
13809742-T-A 11689036-T-A ***
13809873-G-T 11689167-G-T ***
13881394-A-C 11760688-A-C ***
13895785-C-A 11775079-C-A ***
13900182-C-A 11779476-C-A ***
13927885-C-A 11807179-C-A ***
14101023-G-T 11980317-G-T ***
13723170-A-G 11567494-A-G ***
14196246-C-A 12075540-C-A ***
14225724-G-T 12105018-G-T ***
14257245-A-T 12136539-A-T ***
14293730-T-G 12173024-T-G ***
14297902-C-A 12177196-C-A ***
14325040-C-T 12204334-C-T ***
14325049-C-T 12204343-C-T ***
14325050-A-C 12204344-A-C ***
13735165-T-A 11579489-T-A ***
13723166-C-T 11567490-C-T ***
14356649-C-A 12235944-C-A ***
13460948-T-A 11305272-T-A ***
13253987-C-A 11098311-C-A ***
13306061-C-A 11150385-C-A ***
13311762-C-A 11156086-C-A ***
13331195-C-A 11175519-C-A ***
13429871-C-A 11274195-C-A ***
13433737-G-A 11278061-G-A ***
13460150-T-C 11304474-T-C ***
13461230-T-A 11305554-T-A ***
13723165-A-G 11567489-A-G ***
13465533-A-G 11309857-A-G ***
13466163-C-A 11310487-C-A ***
13474788-T-A 11319112-T-A ***
13476912-C-A 11321236-C-A ***
13477799-G-A 11322123-G-A ***
13485472-G-A 11329796-G-A ***
13486616-G-C 11330940-G-C ***
13723160-A-G 11567484-A-G ***
14325052-G-A 12204346-G-A ***
14366293-A-C 12245588-A-C ***
15734253-C-A 13622373-C-A ***
15364546-C-A 13252666-C-A ***
14960069-A-C 12848144-A-C ***
14960070-T-C 12848145-T-C ***
15113638-C-A 13001725-C-A ***
15150944-G-T 13039031-G-T ***
15151395-T-C 13039482-T-C ***
15202270-T-C 13090356-T-C ***
15290083-C-A 13178182-C-A ***
15366092-G-T 13254212-G-T ***
14823537-A-T 12711604-A-T ***
15374472-T-C 13262592-T-C ***
15374474-C-T 13262594-C-T ***
15397839-G-A 13285959-G-A ***
15403512-C-A 13291632-C-A ***
15427475-C-A 13315595-C-A ***
15580065-T-A 13468185-T-A ***
15699825-G-T 13587945-G-T ***
15729158-G-T 13617278-G-T ***
14846878-C-A 12734944-C-A ***
14810900-C-A 12698971-C-A ***
14366429-C-A 12245724-C-A ***
14499417-T-C 12387622-T-C ***
14371288-C-A 12250584-C-A ***
14377913-C-A 12257209-C-A ***
14385323-C-A 12264619-C-A ***
14422827-C-A 12302102-C-A ***
14475971-G-T 12355240-G-T ***
14499411-A-G 12387616-A-G ***
14499414-T-C 12387619-T-C ***
14499418-G-T 12387623-G-T ***
14798676-C-A 12686747-C-A ***
14499429-G-T 12387634-G-T ***
14499440-T-G 12387645-T-G ***
14696020-A-T 12584086-A-T ***
14697038-A-G 12585104-A-G ***
14698396-T-A 12586462-T-A ***
14700172-G-A 12588238-G-A ***
14758053-C-A 12646122-C-A ***
14786483-C-A 12674553-C-A ***
14071354-CTTTTTTTTTTTTTTTTTT-C 11950648-CTTTTTTTTTTTTTTTTTT-C 25×T***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Uncertain Mutations

NGS tests don't always cover all of the Y chromosome and, even when they do, the results can be inconclusive. The following mutations don't have clear results and have been assumed to be positive or negative. For those mutations that are assumed to be positive, the assumed SNP/INDEL will likely be found on the tree in some upstream block. It is unclear if it should be placed upstream of your results or parallel to them. The situation is reversed for mutations assumed negative. Those SNPs/INDELs will likely be found on a parallel branch on the tree, and it is unclear if they should be positioned upstream. As more results come in, the ambiguity may resolve itself, or it may be necessary to consult the BAM file for your test (available from FamilyTreeDNA or FullGenomes Corp) or by direct SNP testing (Sanger Sequencing - YSEQ or FamilyTreeDNA).

SNPs/INDELs:

BlockRegionPOS-REF-ALT (hg19)POS-REF-ALT (hg38)NamesNotes
571DYZ19 22474810-A-T 20312924-A-T FGC27678 Uncertain, but assumed positive.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Cronin1325141111-13121213131429178-1011112515182915-16-16-17121119-231716191739-39121211915-1681010810101221-241610121216812242013131113121112123615916112426201211121211913121011113012122413101023152013241713152412231810141791211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 2071961047217175402447600556
Used in age calculations1047217175402447600556
Counts of SNPs64
Variant counts last updated 2019-05-04 11:21:40.


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