Beers
Kane-BY3: 964752Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | Kane-BY3 964752 |
---|---|---|---|---|---|---|---|---|
22458513-C-G | 20296627-C-G | Z16343 | Z16356 | DYZ19 | + | |||
13461150-A-T | 11305474-A-T | + | ||||||
8591745-C-T | 8723704-C-T | FT236221 | Y | Y | + | |||
10018129-TTTTA-T | 10180520-TTTTA-T | 5×TTTA | + | |||||
15683008-C-T | 13571128-C-T | FT329706 | Y | + | ||||
22458531-G-A | 20296645-G-A | S8368 | ZS1146 | DYZ19 | + | |||
22440742-T-G | 20278856-T-G | Y82427 | BY36260 | DYZ19 | + | |||
8069990-G-A | 8201949-G-A | A18621 | Y | Y | + | |||
11648129-C-T | + | |||||||
8282391-A-T | 8414350-A-T | FTB59732 | Y | Y | + | |||
21853677-C-CA | 19691791-C-CA | 43×A | + | |||||
18724886-G-T | 16613006-G-T | Y | Y | 11×T | + | |||
18892266-ATTTTATTTTATTTAT-A | 16780386-ATTTTATTTTATTTAT-A | + | ||||||
5550280-G-GTTTTT | 5682239-G-GTTTTT | 39×T | + | |||||
5505962-A-AT | 5637921-A-AT | 53×T | + | |||||
3196057-T-G | 3328016-T-G | + | ||||||
3825299-C-G | 3957258-C-G | + | ||||||
3902974-A-T | 4034933-A-T | + | ||||||
5249323-A-G | 5381282-A-G | + | ||||||
5332043-A-G | 5464002-A-G | + | ||||||
5724836-T-A | 5856795-T-A | + | ||||||
5742331-CA-C | 5874290-CA-C | + | ||||||
6052230-GAATA-G | 6184189-GAATA-G | + | ||||||
7065826-G-A | 7197785-G-A | Y | Y | + | ||||
7325047-T-C | 7457006-T-C | Y | Y | + | ||||
7360065-A-G | 7492024-A-G | Y | Y | + | ||||
8068436-C-A | 8200395-C-A | Y | Y | + | ||||
8331951-G-A | 8463910-G-A | Y | Y | + | ||||
8833328-G-A | 8965287-G-A | Y | Y | + | ||||
9097832-CA-C | 9260223-CA-C | + | ||||||
9417585-C-T | 9579976-C-T | Y | Y | + | ||||
9520082-T-A | 9682473-T-A | + | ||||||
9610858-C-G | 9773249-C-G | IR3_Prx | + | |||||
10005043-T-G | 10167434-T-G | Y | + | |||||
13311312-G-T | 11155636-G-T | + | ||||||
13431292-T-G | 11275616-T-G | + | ||||||
13710990-T-A | 11555314-T-A | + | ||||||
13726590-T-TATGGAATGGAATGGA | 11570914-T-TATGGAATGGAATGGA | + | ||||||
14051904-G-T | 11931198-G-T | Y | Y | + | ||||
13197843-C-CAAAAAAAAAAAAAAAAA | 42×A | + | ||||||
15608370-C-T | 13496490-C-T | Y | Y | + | ||||
16336687-G-A | 14224807-G-A | Y | Y | + | ||||
16661907-G-T | 14550027-G-T | Y | Y | + | ||||
16765130-A-T | 14653250-A-T | Y | Y | + | ||||
18095158-C-T | 15983278-C-T | Y | Y | + | ||||
19115595-G-A | 17003715-G-A | Y | Y | + | ||||
19555816-C-G | 17443936-C-G | Y | + | |||||
20815371-C-T | 18653485-C-T | P4_Gap | + | |||||
21113199-T-C | 18951313-T-C | Y | Y | + | ||||
21436873-A-G | 19274987-A-G | Y | Y | + | ||||
22048695-A-AAATAAT | 19886809-A-AAATAAT | 9×AAT | + | |||||
22162360-C-A | 20000474-C-A | Y | Y | + | ||||
22226866-A-G | 20064980-A-G | DYZ19 | + | |||||
22237564-C-T | 20075678-C-T | DYZ19 | + | |||||
22238360-AGTG-A | 20076474-AGTG-A | DYZ19 | + | |||||
22439000-G-T | 20277114-G-T | DYZ19 | + | |||||
22458532-T-C | 20296646-T-C | DYZ19 | + | |||||
22777164-G-C | 20615278-G-C | Y | + | |||||
22900542-G-T | 20738656-G-T | Y | Y | + | ||||
24134633-G-A | 21988486-G-A | P3_b1 | + | |||||
25505124-C-CT | 23358977-C-CT | P1_gr1 | 39×T | + | ||||
27031713-A-T | 24885566-A-T | P1_r4 | + | |||||
13493962-C-T | 11338286-C-T | * | ||||||
28805503-A-G | 26659356-A-G | * | ||||||
27967336-G-GTA | 25821189-G-GTA | P1_Y2 | 10×TA | * | ||||
25815191-ATGTG-A | 23669044-ATGTG-A | P1_b3 | 13×TG | * | ||||
58848158-C-CCCATT | 56742662-C-CAATGG | 10×CCATT | * | |||||
5869966-G-GTTTTTTTTTT | 6001925-G-GTTTTTTTTTT | 15×T | * | |||||
3933444-CAT-C | 4065403-CAT-C | * | ||||||
28225636-A-AT | 26079489-A-AT | P1_b4 | 11×T | * | ||||
9220009-C-G | 9382400-C-G | Y | * | |||||
13699320-G-A | 11543644-G-A | FGC59460 | * | |||||
18908110-G-GTA | 16796230-G-GTA | * | ||||||
4474309-G-T | 4606268-G-T | * | ||||||
9700317-GAAC-G | 9862708-GAAC-G | IR3_Prx | 7×AAC | * | ||||
5308807-G-T | 5440766-G-T | * | ||||||
58884806-A-C | 56706065-T-G | * | ||||||
27427095-A-AT | 25280948-A-AT | P1_g3 | 9×T | * | ||||
5666004-T-C | 5797963-T-C | * | ||||||
13512468-T-A | 11356792-T-A | * | ||||||
8600247-GCA-G | 8732206-GCA-G | 8×CA | * | |||||
13253782-A-G | 11098106-A-G | * | ||||||
58848388-T-C | 56742483-A-G | * | ||||||
13698960-C-G | 11543284-C-G | * | ||||||
13726484-G-T | 11570808-G-T | * | ||||||
3387992-C-T | 3519951-C-T | * | ||||||
4403683-G-T | 4535642-G-T | * | ||||||
4474293-C-G | 4606252-C-G | * | ||||||
5995474-T-A | 6127433-T-A | * | ||||||
6613151-C-G | 6745110-C-G | * | ||||||
9931379-G-A | 10093770-G-A | Y | * | |||||
9979125-T-A | 10141516-T-A | Y | * | |||||
13242235-A-G | 11086559-A-G | * | ||||||
13242372-G-C | 11086696-G-C | * | ||||||
13252473-C-T | 11096797-C-T | * | ||||||
13261276-T-G | 11105600-T-G | * | ||||||
13261921-G-T | 11106245-G-T | * | ||||||
13279495-C-G | 11123819-C-G | * | ||||||
13295642-T-G | 11139966-T-G | * | ||||||
13296715-A-G | 11141039-A-G | * | ||||||
13392768-CA-C | 11237092-CA-C | 11×A | * | |||||
13436262-G-T | 11280586-G-T | * | ||||||
13438688-G-T | 11283012-G-T | * | ||||||
13469780-A-C | 11314104-A-C | * | ||||||
13478556-T-G | 11322880-T-G | * | ||||||
13499210-A-G | 11343534-A-G | * | ||||||
13500074-C-A | 11344398-C-A | * | ||||||
13500077-C-G | 11344401-C-G | * | ||||||
13571106-C-T | 11415430-C-T | * | ||||||
13571109-A-C | 11415433-A-C | * | ||||||
13578291-C-G | 11422615-C-G | * | ||||||
13711998-G-A | 11556322-G-A | * | ||||||
16344977-TTTC-T | 14233097-TTTC-T | 6×TTC | * | |||||
16642608-C-T | 14530728-C-T | Y | Y | * | ||||
16642612-G-C | 14530732-G-C | Y | Y | * | ||||
22277104-G-A | 20115218-G-A | DYZ19 | * | |||||
28709494-G-A | 26563347-G-A | * | ||||||
59030975-G-T | 56884828-G-T | * | ||||||
13464981-C-A | 11309305-C-A | * | ||||||
15358761-G-GAAA | 13246880-G-GAA | 26×A | * | |||||
3088643-AAG-A | 3220602-AAG-A | 8×AG | * | |||||
9931347-C-T | 10093738-C-T | Y | * | |||||
9931378-A-G | 10093769-A-G | Y | * | |||||
13372815-C-T | 11217139-C-T | * | ||||||
13403779-G-A | 11248103-G-A | * | ||||||
13442158-C-G | 11286482-C-G | * | ||||||
13449727-T-TAAACC | 11294051-T-TAAACC | * | ||||||
13483767-C-A | 11328091-C-A | * | ||||||
13512645-G-A | 11356969-G-A | * | ||||||
13692043-A-C | 11536367-A-C | * | ||||||
14678904-C-CTT | 12566970-C-CTT | 10×T | * | |||||
21446240-TGAG-T | 19284354-TGAG-T | * | ||||||
22509961-G-T | 20348075-G-T | DYZ19 | * | |||||
23532864-TAC-T | 21370978-TAC-T | * | ||||||
27127610-C-A | 24981463-C-A | Z37133 | P1_g3 | * | ||||
28790621-G-T | 26644474-G-T | * | ||||||
28814364-A-G | 26668217-A-G | * | ||||||
58855789-A-T | 56735082-T-A | * | ||||||
58869353-T-C | 56721518-A-G | * | ||||||
13733917-G-T | 11578241-G-T | * | ||||||
15604354-CAAAAAA-C | 13492474-CAAAAAA-C | 20×A | * | |||||
28802569-T-C | 26656422-T-C | * | ||||||
13733916-C-T | 11578240-C-T | * | ||||||
59026969-T-TTA | 56880822-T-TTA | * | ||||||
58854810-T-G | 56736061-A-C | * | ||||||
9958747-T-G | 10121138-T-G | Y | * | |||||
26100509-G-GTTT | 23954362-G-GTTT | P1_Y1 | 35×T | * | ||||
58885197-A-G | 56705674-T-C | * | ||||||
8426377-G-GCTT,GCTTCTT | 8558336-G-GCTT,GCTTCTT | 22×CTT | * | |||||
15658259-T-TAC | 13546379-T-TAC | 11×AC | * | |||||
13478262-G-A | 11322586-G-A | * | ||||||
9958755-A-T | 10121146-A-T | Y | * | |||||
9958762-C-CCA | 10121153-C-CCA | * | ||||||
5308809-G-T | 5440768-G-T | * | ||||||
22467292-G-C | 20305406-G-C | DYZ19 | * | |||||
27523621-G-GT | 25377474-G-GT | P1_Y2 | 10×T | * | ||||
13692566-A-G | 11536890-A-G | * | ||||||
13254611-T-TGTGTG | 11098935-T-TGTGTG | * | ||||||
58860279-C-T | 56730592-G-A | * | ||||||
58884206-T-C | 56706665-A-G | * | ||||||
13261301-C-A | 11105625-C-A | * | ||||||
59000268-G-GA | 56854121-G-GA | 8×A | * | |||||
13478412-C-T | 11322736-C-T | * | ||||||
5433983-G-GTA | 5565942-G-GTA | 10×TA | * | |||||
27482837-AT-A | 25336690-AT-A | P1_Y2 | 16×T | * | ||||
58914478-C-T | 56676393-G-A | * | ||||||
17193767-TACAC-T,TAC | 15081887-TACAC-T,TAC | 13×AC | * | |||||
9182140-C-T | 9344531-C-T | Y | * | |||||
58904837-G-A | 56686034-C-T | * | ||||||
13474053-A-T | 11318377-A-T | * | ||||||
22317197-T-A | 20155311-T-A | DYZ19 | * | |||||
22317201-C-A | 20155315-C-A | DYZ19 | * | |||||
5035558-TTG-T,TTGTGTGTG | 5167517-TTG-T,TTGTGTGTG | 22×TG | * | |||||
2707575-G-GA | 2839534-G-GA | 10×A | * | |||||
9979150-A-G | 10141541-A-G | Y | * | |||||
13479282-C-T | 11323606-C-T | BY86027 | * | |||||
13489192-G-T | 11333516-G-T | * | ||||||
7100954-C-CTT | 7232913-C-CTT | 32×T | * | |||||
10964927-A-C | * | |||||||
17150717-G-GA | 15038837-G-GA | F9497 | 9×A | * | ||||
23435682-CTTT-C,CTT | 21273796-CTTT-C,CTT | 21×T | * | |||||
15336019-C-CA | 13224137-C-CA | 30×A | * | |||||
10662211-C-G | * | |||||||
13697328-G-C | 11541652-G-C | * | ||||||
13462033-C-T | 11306357-C-T | * | ||||||
15449890-T-A | 13338010-T-A | Y | Y | * | ||||
14492793-CTTT-C | 12380990-CTTT-C | 15×T | * | |||||
13468125-C-T | 11312449-C-T | * | ||||||
13696944-G-A | 11541268-G-A | * | ||||||
5999363-C-CAA | 6131322-C-CAA | 20×A | * | |||||
9870579-GA-G | 10032970-GA-G | 9×A | * | |||||
8075936-CTTTTT-C | 8207895-CTTTTT-C | 17×T | * | |||||
10959615-T-A | * | |||||||
56706612-TGTCATGGGATGGC-T | * | |||||||
21922080-C-CAA | 19760194-C-CAA | 23×A | * | |||||
13488839-CGGTTG-C | 11333163-CGGTTG-C | * | ||||||
10783038-T-C | * | |||||||
13483673-C-A | 11327997-C-A | * | ||||||
14009385-C-G | 11888679-C-G | Y | Y | * | ||||
13463778-G-C | 11308102-G-C | * | ||||||
13489433-G-A | 11333757-G-A | * | ||||||
22489679-G-T | 20327793-G-T | DYZ19 | * | |||||
13512418-C-T | 11356742-C-T | * | ||||||
9931316-T-C | 10093707-T-C | Y | * | |||||
13478349-G-T | 11322673-G-T | * | ||||||
13487603-G-A | 11331927-G-A | * | ||||||
13691651-A-T | 11535975-A-T | * | ||||||
13721720-T-A | 11566044-T-A | * | ||||||
14009369-C-G | 11888663-C-G | Y | Y | * | ||||
10998402-T-A | * | |||||||
4834245-T-TA,TAA | 4966204-T-TA,TAA | 23×A | * | |||||
58884103-C-T | 56706768-G-A | * | ||||||
8760517-CT-C,CTT | 8892476-CT-C,CTT | 20×T | * | |||||
8599992-G-GTT | 8731951-G-GTT | 16×T | * | |||||
14195817-C-CAA | 12075111-C-CAA | 14×A | * | |||||
58884147-C-A | 56706724-G-T | * | ||||||
8214860-G-GTTT | 8346819-G-GTTT | 21×T | * | |||||
13464508-T-G | 11308832-T-G | * | ||||||
16692755-TG-T | 14580875-TG-T | * | ||||||
13489354-G-A | 11333678-G-A | * | ||||||
13463677-C-A | 11308001-C-A | * | ||||||
5096105-CT-C | 5228064-CT-C | 9×T | * | |||||
13489345-G-T | 11333669-G-T | * | ||||||
13354869-A-AC | 11199193-A-AC | * | ||||||
26971341-T-TA | 24825194-T-TA | P1_r4 | 10×A | * | ||||
13468031-A-G | 11312355-A-G | * | ||||||
13252914-T-C | 11097238-T-C | * | ||||||
13252928-A-G | 11097252-A-G | * | ||||||
13252933-G-A | 11097257-G-A | * | ||||||
17046715-GTT-G,GT | 14934835-GTT-G,GT | 25×T | * | |||||
10998388-T-C | * | |||||||
13393480-C-A | 11237804-C-A | * | ||||||
8431228-CT-C,CTT | 8563187-CT-C,CTT | 17×T | * | |||||
13521917-A-AT | 11366241-A-AT | 10×T | * | |||||
10672210-TCTCCA-T | * | |||||||
17060348-AT-A | 14948468-AT-A | 9×T | * | |||||
56678188-G-A | * | |||||||
5662080-T-C | 5794039-T-C | FGC47786 | * | |||||
13705858-G-A | 11550182-G-A | FT449117 | * | |||||
13489435-C-A | 11333759-C-A | * | ||||||
13469356-G-A | 11313680-G-A | BY153336 | * | |||||
13641089-A-G | 11485413-A-G | * | ||||||
6183212-G-T | 6315171-G-T | IR3_Dst | 20×CA | * | ||||
21435190-C-CTT | 19273304-C-CTT | 15×T | * | |||||
13252918-G-A | 11097242-G-A | * | ||||||
13252930-A-G | 11097254-A-G | * | ||||||
17074613-A-C | 14962733-A-C | Y | Y | * | ||||
13462150-T-C | 11306474-T-C | * | ||||||
17963663-GT-G | 15851783-GT-G | 9×T | * | |||||
13464394-T-G | 11308718-T-G | * | ||||||
13464480-G-A | 11308804-G-A | * | ||||||
13466446-T-G | 11310770-T-G | * | ||||||
13462016-C-G | 11306340-C-G | * | ||||||
13478807-C-A | 11323131-C-A | * | ||||||
13485547-TC-T | 11329871-TC-T | * | ||||||
13721616-C-T | 11565940-C-T | 4×ATGGA | * | |||||
13721639-G-A | 11565963-G-A | * | ||||||
13721649-G-A | 11565973-G-A | * | ||||||
10968423-T-A | * | |||||||
10968437-T-G | * | |||||||
10968438-C-A | * | |||||||
13489200-G-T | 11333524-G-T | * | ||||||
13469684-G-A | 11314008-G-A | BY210308 | * | |||||
9964027-C-A | 10126418-C-A | Y | * | |||||
13478849-CACGAA-C | 11323173-CACGAA-C | * | ||||||
13488957-G-GTT | 11333281-G-GTT | * | ||||||
26593442-C-CT | 24447295-C-CT | P1_g2 | 11×T | * | ||||
19064934-CA-C | 16953054-CA-C | 8×A | * | |||||
6398637-AACAC-A,AAC | 6530596-AACAC-A,AAC | 23×AC | * | |||||
13195149-T-G | 11039473-T-G | * | ||||||
13195150-T-C | 11039474-T-C | * | ||||||
13442777-G-A | 11287101-G-A | * | ||||||
13504123-A-G | 11348447-A-G | * | ||||||
13532685-A-G | 11377009-A-G | * | ||||||
13539154-G-A | 11383478-G-A | * | ||||||
13578321-C-T | 11422645-C-T | * | ||||||
28807429-T-A | 26661282-T-A | * | ||||||
28814077-A-G | 26667930-A-G | * | ||||||
56749913-G-A | * | |||||||
9980743-G-A | 10143134-G-A | Y | * | |||||
13242026-C-T | 11086350-C-T | * | ||||||
13242027-A-G | 11086351-A-G | * | ||||||
13439700-G-T | 11284024-G-T | * | ||||||
13464809-T-C | 11309133-T-C | * | ||||||
13512434-T-C | 11356758-T-C | * | ||||||
13529041-C-T | 11373365-C-T | * | ||||||
13705873-C-T | 11550197-C-T | * | ||||||
13705874-G-T | 11550198-G-T | * | ||||||
25443006-A-AT | 23296859-A-AT | P2_r2 | 9×T | * | ||||
13206784-C-CA,CAAA | 11051108-C-CA,CAAA | 14×A | * | |||||
13374277-GAA-G | 11218601-GAA-G | 13×A | * | |||||
9951677-A-C | 10114068-A-C | Y | * | |||||
13565515-T-G | 11409839-T-G | * | ||||||
13586645-T-C | 11430969-T-C | * | ||||||
19231319-CT-C,CTT | 17119439-CT-C,CTT | 24×T | * | |||||
56859432-A-C | * | |||||||
7608436-CCTCTCT-C,CCT | 7740395-CCTCTCT-C,CCT | 15×CT | * | |||||
4686573-CAA-C,CA | 4818532-CAA-C,CA | 15×A | * | |||||
17669700-CAT-C,CATAT | 15557820-CAT-C,CATAT | 15×AT | * | |||||
13583716-C-T | 11428040-C-T | * | ||||||
13461900-C-G | 11306224-C-G | * | ||||||
56878290-C-A | * | |||||||
22345461-G-T | 20183575-G-T | DYZ19 | * | |||||
19791198-G-A | 17679318-G-A | P5_Prx | * | |||||
22508652-T-C | 20346766-T-C | DYZ19 | * | |||||
28747705-AT-A,ATT | 26601558-AT-A,ATT | 27×T | * | |||||
13242234-C-T | 11086558-C-T | * | ||||||
5773410-A-AT | 5905369-A-AT | 10×T | * | |||||
4417119-A-AT | 4549078-A-AT | * | ||||||
5425651-C-A | 5557610-C-A | * | ||||||
13475850-AG-A | 11320174-AG-A | * | ||||||
13512529-C-CTA | 11356853-C-CTA | * | ||||||
20815408-CATAT-C,CAT | 18653522-CATAT-C,CAT | P4_Gap | 22×AT | * | ||||
13469153-A-T | 11313477-A-T | * | ||||||
56707471-A-C | * | |||||||
56706778-G-A | * | |||||||
56760215-A-G | * | |||||||
13400517-T-C | 11244841-T-C | * | ||||||
13464746-G-T | 11309070-G-T | * | ||||||
22510656-A-T | 20348770-A-T | DYZ19 | * | |||||
13476614-G-A | 11320938-G-A | * | ||||||
13489383-CG-C | 11333707-CG-C | * | ||||||
16458192-T-C | 14346312-T-C | Y | Y | * | ||||
13535164-C-A | 11379488-C-A | * | ||||||
13535167-T-C | 11379491-T-C | * | ||||||
13476518-G-A | 11320842-G-A | * | ||||||
7524670-C-A | 7656629-C-A | Y | Y | * | ||||
8648172-G-GAT,GATAT | 8780131-G-GAT,GATAT | 14×AT | * | |||||
6013639-A-ATT | 6145598-A-ATT | 11×T | * | |||||
13479248-C-T | 11323572-C-T | * | ||||||
13461920-C-T | 11306244-C-T | * | ||||||
15865946-CTTTTTTTTTTTTTTTTT-C,CT | 13754066-CTTTTTTTTTTTTTTTTT-C,CT | 37×T | * | |||||
13241986-G-A | 11086310-G-A | * | ||||||
13469709-T-A | 11314033-T-A | * | ||||||
4964729-A-AT | 5096688-A-AT | 34×T | * | |||||
13488958-G-C | 11333282-G-C | * | ||||||
13400547-C-A | 11244871-C-A | * | ||||||
13400548-A-T | 11244872-A-T | * | ||||||
13723163-G-C | 11567487-G-C | * | ||||||
13723165-A-C | 11567489-A-C | * | ||||||
13468464-C-T | 11312788-C-T | * | ||||||
13468474-G-T | 11312798-G-T | * | ||||||
13469160-T-A | 11313484-T-A | * | ||||||
13479141-G-A | 11323465-G-A | * | ||||||
13489591-C-A | 11333915-C-A | * | ||||||
13711745-AATGGAACGGAATGGAATTAAATGGAACGGAATGGAATGGC-A | 11556069-AATGGAACGGAATGGAATTAAATGGAACGGAATGGAATGGC-A | * | ||||||
16809372-TGATAGATA-T,TGATA | 14697492-TGATAGATA-T,TGATA | 11×GATA | * | |||||
13469381-G-T | 11313705-G-T | * | ||||||
13478856-CG-C | 11323180-CG-C | * | ||||||
16642622-T-TTC | 14530742-T-TTC | * | ||||||
16642623-GGC-G | 14530743-GGC-G | * | ||||||
56830616-A-C | * | |||||||
13278718-A-AC | 11123042-A-AC | * | ||||||
13278724-A-AT | 11123048-A-AT | * | ||||||
13404483-C-T | 11248807-C-T | * | ||||||
13404503-T-A | 11248827-T-A | * | ||||||
13462081-C-A | 11306405-C-A | * | ||||||
13462097-C-A | 11306421-C-A | * | ||||||
13462105-A-C | 11306429-A-C | * | ||||||
13462116-CAA-C | 11306440-CAA-C | * | ||||||
13462119-C-CTG | 11306443-C-CTG | * | ||||||
13462345-ATC-A | 11306669-ATC-A | * | ||||||
13464503-C-A | 11308827-C-A | * | ||||||
13464522-T-TAAGG | 11308846-T-TAAGG | * | ||||||
13464680-T-C | 11309004-T-C | * | ||||||
13464700-A-C | 11309024-A-C | * | ||||||
13512540-T-TCTAC | 11356864-T-TCTAC | * | ||||||
13512543-C-CTATATT | 11356867-C-CTATATT | * | ||||||
6402017-A-ATGATGT | 6533976-A-ATGATGT | * | ||||||
9980251-G-A | 10142642-G-A | FT462866 | Y | * | ||||
9980252-C-T | 10142643-C-T | BY82375 | Y | * | ||||
10662209-T-C | * | |||||||
13353803-T-C | 11198127-T-C | * | ||||||
13462123-G-C | 11306447-G-C | FT443916 | * | |||||
22509137-G-C | 20347251-G-C | DYZ19 | * | |||||
28807436-G-A | 26661289-G-A | * | ||||||
28807437-A-T | 26661290-A-T | * | ||||||
3387981-C-T | 3519940-C-T | * | ||||||
13462128-A-C | 11306452-A-C | * | ||||||
13462129-G-T | 11306453-G-T | * | ||||||
11015016-A-AAT | * | |||||||
11015018-TCC-T | * | |||||||
11015022-TTCCAC-T | * | |||||||
13257709-G-A | 11102033-G-A | * | ||||||
56827687-T-C,TGCCATCCGATTGCATGCCATCCGATTGCATGCCATCCGATTC | * | |||||||
14565425-T-C | 12453625-T-C | Y | * | |||||
28539174-CAA-C,CA | 26393027-CAA-C,CA | 20×A | * | |||||
13461959-C-T | 11306283-C-T | * | ||||||
13734896-G-A | 11579220-G-A | * | ||||||
13267613-A-AAAAAAAG | 11111937-A-AAAAAAAG | * | ||||||
13461937-G-C | 11306261-G-C | * | ||||||
13462076-G-C | 11306400-G-C | * | ||||||
13462079-T-A | 11306403-T-A | * | ||||||
13478347-C-T | 11322671-C-T | * | ||||||
13723175-G-A | 11567499-G-A | * | ||||||
25173412-AT-A | 23027265-AT-A | g1 | 9×T | * | ||||
28803142-G-A | 26656995-G-A | * | ||||||
13436098-A-T | 11280422-A-T | * | ||||||
13463580-C-T | 11307904-C-T | * | ||||||
13470134-C-G | 11314458-C-G | * | ||||||
13470136-A-C | 11314460-A-C | * | ||||||
13470182-C-A | 11314506-C-A | * | ||||||
13476579-G-C | 11320903-G-C | * | ||||||
13476594-T-A | 11320918-T-A | * | ||||||
13563544-G-T | 11407868-G-T | * | ||||||
13734128-AATGGAACGGAATTGAATGTC-A | 11578452-AATGGAACGGAATTGAATGTC-A | * | ||||||
56756517-T-A | * | |||||||
56834489-A-C | * | |||||||
13476783-A-G | 11321107-A-G | * | ||||||
13476796-C-A | 11321120-C-A | * | ||||||
13476827-C-A | 11321151-C-A | * | ||||||
13476834-G-C | 11321158-G-C | * | ||||||
13476847-G-T | 11321171-G-T | * | ||||||
9986775-GAAGT-G | 10149166-GAAGT-G | * | ||||||
9986788-C-T | 10149179-C-T | Y | * | |||||
9986789-A-G | 10149180-A-G | Y | * | |||||
11014999-C-CCAAAG | * | |||||||
13347136-T-C | 11191460-T-C | * | ||||||
13470152-TCC-T | 11314476-TCC-T | * | ||||||
13691798-T-TATGGA,TGGA | 11536122-T-TATGGA,TGGA | * | ||||||
13726488-A-AGG | 11570812-A-AGG | * | ||||||
22436456-GCAGGTTCATGGGCTTGCTCACTT-G | 20274570-GCAGGTTCATGGGCTTGCTCACTT-G | DYZ19 | * | |||||
22436483-GAATGAAGCTGCAGACCTTTACGGTGAGTGTTACAGCACTTAAAGGTGTTATGTCCAGAGTTTGTTCCTTCAGATGTGTCCAGAGTTTCTTCCTTCTGGCAGT-G | 20274597-GAATGAAGCTGCAGACCTTTACGGTGAGTGTTACAGCACTTAAAGGTGTTATGTCCAGAGTTTGTTCCTTCAGATGTGTCCAGAGTTTCTTCCTTCTGGCAGT-G | DYZ19 | * | |||||
28588195-G-GATGT | 26442048-G-GATGT | * | ||||||
2933053-GTGTTTTCTTTTGTTTTGTTC-G | 3065012-GTGTTTTCTTTTGTTTTGTTC-G | * | ||||||
10678044-C-CCATTCCATTCCATTCCAT | * | |||||||
7567753-CT-C,CTT | 7699712-CT-C,CTT | 25×T | * | |||||
13512405-A-AG | 11356729-A-AG | * | ||||||
28805498-G-GCTT | 26659351-G-GCTT | * | ||||||
28805499-G-GGA | 26659352-G-GGA | * | ||||||
9980754-AGGAAGGAAGGGGACAAAGAAAGAG-A | 10143145-AGGAAGGAAGGGGACAAAGAAAGAG-A | * | ||||||
9980795-T-C | 10143186-T-C | Y | * | |||||
9980800-T-C | 10143191-T-C | Y | * | |||||
9984507-C-G | 10146898-C-G | Y | * | |||||
13239912-T-C | 11084236-T-C | * | ||||||
13239914-G-A | 11084238-G-A | * | ||||||
13395422-T-C | 11239746-T-C | * | ||||||
13461990-G-T | 11306314-G-T | * | ||||||
13478650-C-A | 11322974-C-A | BY86006 | * | |||||
13565519-A-G | 11409843-A-G | * | ||||||
13705871-C-T | 11550195-C-T | * | ||||||
56760263-G-C | * | |||||||
13283105-CT-C | 11127429-CT-C | * | ||||||
13690756-C-G | 11535080-C-G | * | ||||||
9227257-CTTG-C | 9389648-CTTG-C | * | ||||||
13466424-GT-G | 11310748-GT-G | * | ||||||
13730717-T-A | 11575041-T-A | * | ||||||
13730728-G-A | 11575052-G-A | * | ||||||
13488788-C-A | 11333112-C-A | * | ||||||
56678219-G-A | * | |||||||
14565416-A-G | 12453616-A-G | Y | * | |||||
9936659-A-G | 10099050-A-G | Y | * | |||||
11306663-T- | * | |||||||
13478979-C-T | 11323303-C-T | * | ||||||
3895611-C-T | 4027570-C-T | FT379725 | * | |||||
13489454-G-T | 11333778-G-T | * | ||||||
18760242-TTC-T,TTCTC | 16648362-TTC-T,TTCTC | 27×TC | * | |||||
13478984-G-T | 11323308-G-T | * | ||||||
56833506-T-TCC | * | |||||||
13465078-C-A | 11309402-C-A | * | ||||||
13465085-G-A | 11309409-G-A | * | ||||||
13479250-G-A | 11323574-G-A | * | ||||||
13479285-A-T | 11323609-A-T | * | ||||||
11550434-CATGGT- | * | |||||||
26663972-AAGTGGATTGGAGTGGAATGGAGTGCAATGGACTGGAGTGGATTGGAATGGAT- | * | |||||||
56863442-T-C | * | |||||||
13489311-G-A | 11333635-G-A | * | ||||||
13699187-C-G | 11543511-C-G | * | ||||||
13489473-CCT-C | 11333797-CCT-C | * | ||||||
13730729-G-C | 11575053-G-C | * | ||||||
20197726-G- | DYZ19 | * | ||||||
13499059-G-A | 11343383-G-A | * | ||||||
10022452-C-G | 10184843-C-G | Y | * | |||||
11306581-C- | * | |||||||
11556892-A- | * | |||||||
13489626-CCA-C | 11333950-CCA-C | * | ||||||
13463686-A-C | 11308010-A-C | * | ||||||
13463692-C-A | 11308016-C-A | * | ||||||
13463697-G-C | 11308021-G-C | * | ||||||
13463746-G-C | 11308070-G-C | * | ||||||
11321185-GC- | * | |||||||
13478525-G-A | 11322849-G-A | * | ||||||
56706628-CAA- | * | |||||||
11308851-T- | * | |||||||
28814090-T-A | 26667943-T-A | * | ||||||
28814093-T-A | 26667946-T-A | BY26686 | * | |||||
28814099-T-A | 26667952-T-A | FT462712 | * | |||||
13478482-G-C | 11322806-G-C | * | ||||||
13478485-C-G | 11322809-C-G | * | ||||||
56756756-A-G | * | |||||||
9885635-TC-T | 10048026-TC-T | 9×C | * | |||||
3895609-T-C | 4027568-T-C | * | ||||||
10041915-T-A | 10204306-T-A | * | ||||||
11021497-CACTCCTCCCT-C | * | |||||||
11314478-CCAG- | * | |||||||
13470156-A-T | 11314480-A-T | * | ||||||
18401199-CA-C,CAA | 16289319-CA-C,CAA | P6_Gap | 30×A | * | ||||
19492290-C-CAAAAAAAAAA | 17380410-C-CAAAAAAAAAA | 37×A | * | |||||
13489476-G-GCA | 11333800-G-GCA | * | ||||||
23759113-TA-T,TAA | 21597227-TA-T,TAA | 24×A | * | |||||
7166638-A-AT | 7298597-A-AT | * | ||||||
13360479-C-A | 11204803-C-A | * | ||||||
13360502-C-T | 11204826-C-T | * | ||||||
13451191-T-TCCATTCCATTCCACTGCATTCCACTCCACTC | 11295515-T-TCCATTCCATTCCACTGCATTCCACTCCACTC | * | ||||||
13484530-T-TG | 11328854-T-TG | * | ||||||
13489287-G-T | 11333611-G-T | * | ||||||
56832960-C-CCACTCCA,CCTCCA | * | |||||||
13470498-G-A | 11314822-G-A | * | ||||||
13476531-TCA-T | 11320855-TCA-T | * | ||||||
21085779-CA-C,CAAA | 18923893-CA-C,CAAA | 24×A | * | |||||
13463727-C-CG | 11308051-C-CG | * | ||||||
13463788-T-A | 11308112-T-A | * | ||||||
13463791-G-A | 11308115-G-A | * | ||||||
13463800-G-C | 11308124-G-C | * | ||||||
13488479-C-CATAG | 11332803-C-CATAG | * | ||||||
13488483-GTC-G | 11332807-GTC-G | * | ||||||
13488487-GGC-G | 11332811-GGC-G | * | ||||||
19393098-C-CTTTT | 17281218-C-CTTTT | 30×T | * | |||||
13438649-C-A | 11282973-C-A | * | ||||||
56878705-G-T | * | |||||||
56878706-C-G | * | |||||||
25651211-AG-A | 23505064-AG-A | P1_b3 | * | |||||
25651215-A-T | 23505068-A-T | P1_b3 | * | |||||
3838601-C-CTTTT | 3970560-C-CTTTT | 31×T | * | |||||
13730055-G-A | 11574379-G-A | * | ||||||
13730059-T-G | 11574383-T-G | * | ||||||
13464972-A-T | 11309296-A-T | * | ||||||
22489720-T-G | 20327834-T-G | DYZ19 | * | |||||
13489441-A-C | 11333765-A-C | * | ||||||
23120561-A-ATT | 20958675-A-ATT | 11×T | * | |||||
13470109-CAA-C | 11314433-CAA-C | * | ||||||
13462067-A-C | 11306391-A-C | * | ||||||
13478806-T-C | 11323130-T-C | * | ||||||
13469690-A-G | 11314014-A-G | * | ||||||
13489326-T-C | 11333650-T-C | * | ||||||
10693228-A- | * | |||||||
8644324-C-CAA,CAA | 8776283-C-CAA,CAA | 32×A | * | |||||
56825936-ATTCCATTCAATTGCATTCCATTAGATTGC-A | * | |||||||
3561528-T-TA,TA | 3693487-T-TA,TA | * | ||||||
13438225-G-C | 11282549-G-C | * | ||||||
4662199-GT-G,G | 4794158-GT-G,G | 10×T | * | |||||
13484171-CAG-C | 11328495-CAG-C | * | ||||||
16535053-CT-C,CTTT | 14423173-CT-C,CTTT | 35×T | * | |||||
9936527-C-T | 10098918-C-T | Y | * | |||||
56856795-T-TATATTAAAATTTCA | * | |||||||
56832931-T-TCCTCTGCACTCCAC | * | |||||||
28814012-G-T | 26667865-G-T | * | ||||||
28814036-G-T | 26667889-G-T | * | ||||||
28814037-G-C | 26667890-G-C | * | ||||||
28814072-G-GCTT | 26667925-G-GCTT | * | ||||||
13730065-G-A | 11574389-G-A | * | ||||||
11021346-CCTCTCT-C | * | |||||||
11021353-ACTGC-A | * | |||||||
10679708-T-TCAGAAGATCTCACTCTGTCACTCAGGTTGGAGTGCAGTCGCATAATCTCAGCTCACATTACATTTCAGGATTG | * | |||||||
13468384-G-GTAAT,T | 11312708-G-GTAAT,T | * | ||||||
3039839-C-CTTT | 3171798-C-CTTT | 22×T | * | |||||
3181857-C-CAAA | 3313816-C-CAAA | 20×A | * | |||||
3462770-T-C | 3594729-T-C | * | ||||||
3604621-T-TTTAA,TTTAA | 3736580-T-TTTAA,TTTAA | 12×TAA | * | |||||
3738632-T- | * | |||||||
3822962-G-GATAT,GATAT | 3954921-G-GATAT,GATAT | 26×AT | * | |||||
4336695-ATTT-A,ATTTTTT | 4468654-ATTT-A,ATTTTTT | 30×T | * | |||||
4422690-G-A | 4554649-G-A | * | ||||||
4446634-G-T | 4578593-G-T | * | ||||||
4474341-T-C | 4606300-T-C | * | ||||||
4619776-A- | * | |||||||
5009118-A-C | 5141077-A-C | * | ||||||
5138564-AG-A | 5270523-AG-A | * | ||||||
5261698-C-CAAAAAAA | 5393657-C-CAAAAAAA | 48×A | * | |||||
5270693-CTTTTTT-C,CTTTTT | 5402652-CTTTTTT-C,CTTTTT | 22×T | * | |||||
5425093-AT-A | 5557052-AT-A | 8×T | * | |||||
5489574-T-TAA | 5621533-T-TAA | 10×A | * | |||||
6121411-TG-T | 6253370-TG-T | * | ||||||
6121412-G-T | 6253371-G-T | * | ||||||
6336354-G-T | 6468313-G-T | IR3_Dst | * | |||||
6347741-A-AGAAAGAAGGAAG,AGAAGGAAGGAAG | 6479700-A-AGAAAGAAGGAAG,AGAAGGAAGGAAG | 9×GAAG | * | |||||
6347814-G-GAGAA,GAGAA | 6479773-G-GAGAA,GAGAA | 12×AGAA | * | |||||
6468917-A-C | 6600876-A-C | * | ||||||
6799038-A-T | 6930997-A-T | Y | * | |||||
6929890-G-GCCCCCCCCCCC | 7061849-G-GCCCCCCCCCCC | * | ||||||
7137221-ACACACACACACGCGCACACACATATATACACATAAATACGCGCACGTGCGCACGCG-A | 7269180-ACACACACACACGCGCACACACATATATACACATAAATACGCGCACGTGCGCACGCG-A | * | ||||||
7166640-A-ATT,T | 7298599-A-ATT,T | 12×T | * | |||||
7390356-GA-G | 7522315-GA-G | 9×A | * | |||||
7534406-G-GTTTTTTTTTTTTTTTTTTTTTTTT | 7666365-G-GTTTTTTTTTTTTTTTTTTTTTTTT | 19×T | * | |||||
7646431-T-A | 7778390-T-A | Y | Y | * | ||||
7939472-TA-T,TAAA | 8071431-TA-T,TAAA | 35×A | * | |||||
7939516-T-A | 8071475-T-A | Y | Y | * | ||||
7939518-T-A | 8071477-T-A | Y | Y | * | ||||
8581638-A- | * | |||||||
8493440-C-A | 8625399-C-A | Y | Y | * | ||||
8524404-G-T | 8656363-G-T | Y | Y | * | ||||
8669626-G-GTGCCC | 8801585-G-GTGCCC | * | ||||||
8669627-A-C | 8801586-A-C | Y | * | |||||
8669637-CTG-C | 8801596-CTG-C | * | ||||||
8669643-A-C | 8801602-A-C | Y | * | |||||
9304459-G-GGGGGGGGGGGGGGGGGGGGGCCC | 9466850-G-GGGGGGGGGGGGGGGGGGGGGCCC | * | ||||||
9330869-C-CAT | 9493260-C-CAT | * | ||||||
9524289-C-CTATA | 9686680-C-CTATA | 8×TA | * | |||||
9741354-TACAC-T,TAC | 9903745-TACAC-T,TAC | IR3_Prx | 16×AC | * | ||||
9999280-T- | * | |||||||
9839568-A-AAAAC | 10001959-A-AAAAC | * | ||||||
9917883-A-G | 10080274-A-G | Y | * | |||||
9917926-ATG-A | 10080317-ATG-A | * | ||||||
9948486-A-G | 10110877-A-G | Y | * | |||||
9949641-T-G | 10112032-T-G | Y | * | |||||
10154558-C- | * | |||||||
10759549-A-G | * | |||||||
10789000-C-T | * | |||||||
10826459-T-C | * | |||||||
10850851-A-T | * | |||||||
10878273-C-G | * | |||||||
10959605-A-T | * | |||||||
10968445-A-T | * | |||||||
10996530-T-C | * | |||||||
10998394-T-C | * | |||||||
11030984-C-T | * | |||||||
13195193-T-G | 11039517-T-G | * | ||||||
13242167-C-G | 11086491-C-G | * | ||||||
13242184-C-T | 11086508-C-T | * | ||||||
13257605-G-A | 11101929-G-A | * | ||||||
13443192-A-C | 11287516-A-C | * | ||||||
13449753-C-CCATT | 11294077-C-CCATT | * | ||||||
13449755-A-AG | 11294079-A-AG | * | ||||||
13450015-G-C | 11294339-G-C | * | ||||||
13462146-A-AC | 11306470-A-AC | * | ||||||
13463787-C-T | 11308111-C-T | * | ||||||
13463981-A-C | 11308305-A-C | * | ||||||
13464380-C-A | 11308704-C-A | * | ||||||
13464384-C-A | 11308708-C-A | * | ||||||
13464390-GC-G | 11308714-GC-G | * | ||||||
13464393-C-CCCCG | 11308717-C-CCCCG | * | ||||||
13464400-G-GAA | 11308724-G-GAA | * | ||||||
13464402-GGAACA-G | 11308726-GGAACA-G | * | ||||||
11308727-G- | * | |||||||
11308730-C- | * | |||||||
11308731-A- | * | |||||||
13465042-G-T | 11309366-G-T | * | ||||||
13466302-T-G,G | 11310626-T-G,G | * | ||||||
13468118-G-A | 11312442-G-A | * | ||||||
13469162-A-G | 11313486-A-G | * | ||||||
13472263-GA-G | 11316587-GA-G | * | ||||||
13472265-GA-G | 11316589-GA-G | * | ||||||
13476487-A-T | 11320811-A-T | * | ||||||
13476700-G-T | 11321024-G-T | * | ||||||
13476701-G-T | 11321025-G-T | * | ||||||
13476896-C-A | 11321220-C-A | * | ||||||
13478504-A-C | 11322828-A-C | * | ||||||
13478513-T-A | 11322837-T-A | * | ||||||
13478529-C-T | 11322853-C-T | * | ||||||
13478825-C-CCT | 11323149-C-CCT | * | ||||||
13478828-A-C | 11323152-A-C | * | ||||||
13478831-CCA-C | 11323155-CCA-C | * | ||||||
13478843-C-G | 11323167-C-G | * | ||||||
13478862-C-CT | 11323186-C-CT | * | ||||||
13478863-G-GAC | 11323187-G-GAC | * | ||||||
13478866-A-AT | 11323190-A-AT | * | ||||||
13478870-C-CA | 11323194-C-CA | * | ||||||
13478871-C-CT | 11323195-C-CT | * | ||||||
13481870-C-G | 11326194-C-G | * | ||||||
13483395-A-G | 11327719-A-G | * | ||||||
13485094-A-G | 11329418-A-G | * | ||||||
13485907-C-A | 11330231-C-A | * | ||||||
13488830-A-ATGGAATGC | 11333154-A-ATGGAATGC | * | ||||||
13488833-GCCT-G | 11333157-GCCT-G | * | ||||||
11333158-C- | * | |||||||
11333159-C- | * | |||||||
13489365-T-TCCCC | 11333689-T-TCCCC | * | ||||||
11333708-G- | * | |||||||
13489449-G-A | 11333773-G-A | * | ||||||
13489607-G-GGC | 11333931-G-GGC | * | ||||||
13489610-TG-T | 11333934-TG-T | * | ||||||
13489616-C-CA | 11333940-C-CA | * | ||||||
13489821-G-C | 11334145-G-C | * | ||||||
13489858-C-A | 11334182-C-A | * | ||||||
13489861-G-A | 11334185-G-A | * | ||||||
13489871-C-G | 11334195-C-G | * | ||||||
13489880-C-A | 11334204-C-A | * | ||||||
13500146-G-C | 11344470-G-C | * | ||||||
13501851-C-CT | 11346175-C-CT | 10×T | * | |||||
13585072-A-T | 11429396-A-T | * | ||||||
13692967-ATGT-A | 11537291-ATGT-A | * | ||||||
13692971-AAT-A | 11537295-AAT-A | * | ||||||
13692983-TA-T | 11537307-TA-T | * | ||||||
13692987-AAG-A | 11537311-AAG-A | * | ||||||
13692989-G-GCTC | 11537313-G-GCTC | * | ||||||
13693000-G-T | 11537324-G-T | * | ||||||
13704540-A-G | 11548864-A-G | * | ||||||
13707332-C-T | 11551656-C-T | * | ||||||
13730013-CA-C | 11574337-CA-C | * | ||||||
13730020-G-A | 11574344-G-A | * | ||||||
13730038-T-G | 11574362-T-G | * | ||||||
13730050-G-A | 11574374-G-A | * | ||||||
13737469-G-T | 11581793-G-T | * | ||||||
11649663-G-GAATGGAATGGAATGA | * | |||||||
14143412-G-GA,GA | 12022706-G-GA,GA | 12×A | * | |||||
14565432-A-C | 12453632-A-C | Y | * | |||||
14613459-CT-C,CTTTTTTTT | 12501657-CT-C,CTTTTTTTT | 26×T | * | |||||
14712251-C-T | 12600318-C-T | Y | * | |||||
15179010-CAAA-C,CAAAA | 13067096-CAAA-C,CAAAA | 25×A | * | |||||
15428893-AT-A | 13317013-AT-A | 9×T | * | |||||
15906282-T-G | 13794402-T-G | Y | Y | * | ||||
16458187-T-G | 14346307-T-G | Y | Y | * | ||||
16505988-CT-C,CTT | 14394108-CT-C,CTT | 31×T | * | |||||
16692758-A-T | 14580878-A-T | Y | Y | * | ||||
16834746-C-CAA,CAA | 14722866-C-CAA,CAA | 45×A | * | |||||
17090839-ATT-A,ATTT | 14978959-ATT-A,ATTT | 29×T | * | |||||
17802166-TAA-T,TAAA | 15690286-TAA-T,TAAA | 30×A | * | |||||
18060263-TATATATATGTACATGTGTATATATATGTACATATATATGTACATATATATATGTACATATATATGTACATATATATATGTAC-T | 15948383-TATATATATGTACATGTGTATATATATGTACATATATATGTACATATATATATGTACATATATATGTACATATATATATGTAC-T | * | ||||||
18612759-G-GTATATA,GTATATATA | 16500879-G-GTATATA,GTATATATA | 15×TA | * | |||||
18724881-A-AT | 16613001-A-AT | * | ||||||
16937050-A- | * | |||||||
19059774-A-G | 16947894-A-G | Y | Y | * | ||||
19113723-TAAA-T,TAA | 17001843-TAAA-T,TAA | 28×A | * | |||||
19130738-C-CT,CT | 17018858-C-CT,CT | 33×T | * | |||||
19293770-CAA-C,CAAAAA | 17181890-CAA-C,CAAAAA | 29×A | * | |||||
17357967-C- | * | |||||||
19500653-A-AAGAC,C | 17388773-A-AAGAC,C | * | ||||||
20352673-CT-C | 18190787-CT-C | P5_Dst | 10×T | * | ||||
20842366-AAAC-A | 18680480-AAAC-A | P4_Dst | * | |||||
20865390-A-ACAC | 18703504-A-ACAC | P4_Dst | * | |||||
20957689-CT-C | 18795803-CT-C | P4_Dst | 8×T | * | ||||
21197670-G-A | 19035784-G-A | Y | * | |||||
21438785-TA-T,TAA | 19276899-TA-T,TAA | 31×A | * | |||||
21446243-G-GTTTT | 19284357-G-GTTTT | * | ||||||
21569958-TA-AA,T | 19408072-TA-AA,T | 46×A | * | |||||
21807058-C-T | 19645172-C-T | Y | Y | * | ||||
22012826-A-T | 19850940-A-T | Y | * | |||||
22027761-A-G | 19865875-A-G | Y | Y | * | ||||
22238364-AGCAAGACCATGAACCTGCCAGAAGGAAGAAACTCTGAACACATCTGAAGGAACAAACTCTGGACATAACACCTTTAAGTGCTATGACACTCACCGTAAAGTTCTGCAGCTTCATTCTTGAAG-A | 20076478-AGCAAGACCATGAACCTGCCAGAAGGAAGAAACTCTGAACACATCTGAAGGAACAAACTCTGGACATAACACCTTTAAGTGCTATGACACTCACCGTAAAGTTCTGCAGCTTCATTCTTGAAG-A | DYZ19 | * | |||||
22281750-G-C | 20119864-G-C | DYZ19 | * | |||||
22281758-A-T | 20119872-A-T | DYZ19 | * | |||||
22288699-G-T | 20126813-G-T | DYZ19 | * | |||||
22288985-A-C | 20127099-A-C | DYZ19 | * | |||||
22288986-A-C | 20127100-A-C | DYZ19 | * | |||||
22288990-G-GT | 20127104-G-GT | DYZ19 | * | |||||
22317184-A-C | 20155298-A-C | DYZ19 | * | |||||
22317190-T-G | 20155304-T-G | DYZ19 | * | |||||
22318687-C-A | 20156801-C-A | DYZ19 | * | |||||
22325148-T-A | 20163262-T-A | DYZ19 | * | |||||
20163497-GCTCACTTCAAGAATGAAGCTGCAGAATTTAGTGGTGAGCGTTACAGCACTTAAGTTTTTATGTCCAGAGTTTGTTCCTTCAGATAAGTCTAGAGATTCTTCCTTCTGGCAGGTCCATGGTCTTC- | DYZ19 | * | ||||||
22328739-G-A | 20166853-G-A | DYZ19 | * | |||||
22423245-G-C | 20261359-G-C | DYZ19 | * | |||||
22440020-G-A | 20278134-G-A | DYZ19 | * | |||||
22448736-T-C | 20286850-T-C | DYZ19 | * | |||||
22472829-GTGTTATGTCCAGAGTTTGTTCCTGCAGAAATATCCAGAATTTCTTCCTTCTGGCAGGTTTATGGTCTTGCTCACTTTAAGAATGAAGCTGCAGACCTTACTAGTGAGTGTTACAGCAGTTAAAGT-G | 20310943-GTGTTATGTCCAGAGTTTGTTCCTGCAGAAATATCCAGAATTTCTTCCTTCTGGCAGGTTTATGGTCTTGCTCACTTTAAGAATGAAGCTGCAGACCTTACTAGTGAGTGTTACAGCAGTTAAAGT-G | DYZ19 | * | |||||
22483784-T-A | 20321898-T-A | DYZ19 | * | |||||
22714086-A-G | 20552200-A-G | Y | * | |||||
22739716-CAA-C,CAAA | 20577830-CAA-C,CAAA | 24×A | * | |||||
22755755-GA-G | 20593869-GA-G | 8×A | * | |||||
22782038-TA-T | 20620152-TA-T | * | ||||||
22936288-CT-C,CTTTTTT | 20774402-CT-C,CTTTTTT | 25×T | * | |||||
23181452-C-CA | 21019566-C-CA | * | ||||||
23181453-C-A,CAA | 21019567-C-A,CAA | 34×A | * | |||||
23415339-TA-T | 21253453-TA-T | * | ||||||
23476017-TGTTG-T | 21314131-TGTTG-T | * | ||||||
23476025-TTTTTTTG-T | 21314139-TTTTTTTG-T | * | ||||||
23825064-A-AT,ATT | 21663178-A-AT,ATT | 25×T | * | |||||
24108899-C-A | 21962752-C-A | P3_b1 | * | |||||
25096448-G-GGAAAGAAA,GGAAAGAAAGAAA | 22950301-G-GGAAAGAAA,GGAAAGAAAGAAA | g1 | 20×GAAA | * | ||||
25997941-TA-T | 23851794-TA-T | P1_Y1 | 9×A | * | ||||
26416278-AAAAAAAAAAAAAAAAAAAAAG-A | 24270131-AAAAAAAAAAAAAAAAAAAAAG-A | P1_Y1 | * | |||||
26455900-CTTTT-C | 24309753-CTTTT-C | P1_Y1 | 22×T | * | ||||
26479590-CA-C,CAA | 24333443-CA-C,CAA | P1_Y1 | 16×A | * | ||||
27547266-AT-A | 25401119-AT-A | P1_Y2 | 9×T | * | ||||
28370013-T-G,TAG | 26223866-T-G,TAG | P1_gr2 | * | |||||
28488383-C-T | 26342236-C-T | * | ||||||
28544269-T-G | 26398122-T-G | * | ||||||
26445859-GTGT- | * | |||||||
28678185-A-T | 26532038-A-T | * | ||||||
28720132-C-CT,CT | 26573985-C-CT,CT | 24×T | * | |||||
28788560-TGGAGGGGAATGGATTGGAATGAAATGGGTTGGAAAGGAATCGAACGGACTGGAGTGGATTGAACTGGAGTGGAGTGGAATGGGACGGAGTGGAAAGTAGTGGAGTGGAGTGGATTGGTGTGGAATGCAGTGGAGTGGAGTGGAGC-T | 26642413-TGGAGGGGAATGGATTGGAATGAAATGGGTTGGAAAGGAATCGAACGGACTGGAGTGGATTGAACTGGAGTGGAGTGGAATGGGACGGAGTGGAAAGTAGTGGAGTGGAGTGGATTGGTGTGGAATGCAGTGGAGTGGAGTGGAGC-T | * | ||||||
28818206-G-GTAAT | 26672059-G-GTAAT | * | ||||||
28818207-G-GT | 26672060-G-GT | * | ||||||
56721201-CAATGGAATGGAATGGAATGGAATGG-C | 11×AATGG | * | ||||||
56724340-A-T | * | |||||||
56742641-GGAA-G | * | |||||||
56742645-TGG-T | * | |||||||
56752722-A-T | * | |||||||
56752726-C-T | * | |||||||
56757341-A-C | * | |||||||
56826707-A-T,T | * | |||||||
56831653-C-CCACTCCATCCCAT | * | |||||||
56834405-C-CTCCGT | * | |||||||
56834420-T-TCCTA | * | |||||||
56834423-CAT-C | * | |||||||
56834437-C-CAATTT | * | |||||||
56834505-CTCCATTCCTCTCCATTCCATTCCACTCCACTCCATTCCATACCAT-C | * | |||||||
56854226-T-G | * | |||||||
56856390-C-T | * | |||||||
56877090-T-A | * | |||||||
56878212-C-A | * | |||||||
56882996-C-A | * | |||||||
56883675-G-T | * |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.