Big Tree: Person Data

Tree Position

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Blocks	Names	Region	McDonald BED	combBED	STR	Kane-BY3 908809	BigY3 908809
5342130-T-A	5474089-T-A								A+
25994226-C-CT	23848079-C-CT			P1_Y1			9×T		A*
14680960-C-CA	12569026-C-CA						11×A		A*
	10676733-C-T								A*
19601974-C-T	17490094-C-T			P5_Prx	Y				A*
26315876-A-AT	24169729-A-AT			P1_Y1			9×T		A*
25945178-C-CT	23799031-C-CT			P1_Y1			10×T		A*
25850953-C-T	23704806-C-T			P1_Y1					A*
28817188-A-G	26671041-A-G								A*
6431385-G-C	6563344-G-C								A*
	10685921-A-T								A*
	11643714-G-C								A*
13292456-C-T	11136780-C-T								A*
3416300-G-A	3548259-G-A								A*
25354889-T-G	23208742-T-G			P2_r2					A*
18972400-G-T	16860520-G-T				Y	Y			A*
25929676-G-GT	23783529-G-GT			P1_Y1			9×T		A*
6861416-T-TA	6993375-T-TA						12×A	*	A*
24298612-T-G	22152465-T-G			P3_t1					A*
15202331-A-AT	13090417-A-AT						10×T		A*
15405203-A-AT	13293323-A-AT						11×T		A*
6165662-C-CA	6297621-C-CA			IR3_Dst			13×A		A*
27641766-C-CT	25495619-C-CT			P1_Y2			14×T		A*
20769010-C-CA	18607124-C-CA			P4_Prx			10×A		A*
25939403-C-CT	23793256-C-CT			P1_Y1			11×T		A*
26505530-C-CA	24359383-C-CA			P1_Y1			11×A		A*
20703014-G-GA	18541128-G-GA			P4_Prx			10×A		A*
25981407-G-GA	23835260-G-GA			P1_Y1			9×A		A*
2971503-A-G	3103462-A-G								A*
6675843-G-GA	6807802-G-GA						12×A		A*
25934941-T-TA	23788794-T-TA			P1_Y1			10×A		A*
15558503-C-T	13446623-C-T		BY43398		Y	Y			A*
25873100-T-TA	23726953-T-TA			P1_Y1			9×A		A*
18454733-T-TTTTCTTTCTTTC	16342853-T-TTTTCTTTCTTTC			P6_Dst			13×TTTC		A*
7103974-C-CT	7235933-C-CT						11×T		A*
26199613-G-A	24053466-G-A		BY182389	P1_Y1					A*
58990461-C-T	56844314-C-T								A*
13489888-G-A	11334212-G-A								A*
26006574-A-AT	23860427-A-AT			P1_Y1			10×T		A*
26026065-A-AT	23879918-A-AT			P1_Y1			10×T		A*
19685856-A-AT	17573976-A-AT			P5_Prx			9×T		A*
26316686-G-C	24170539-G-C			P1_Y1					A*
26338113-C-T	24191966-C-T			P1_Y1					A*
13470417-C-T	11314741-C-T								A*
26356158-T-G	24210011-T-G			P1_Y1					A*
26329233-A-C	24183086-A-C			P1_Y1					A*
26495977-C-T	24349830-C-T			P1_Y1					A*
20796770-A-G	18634884-A-G			P4_Prx					A*
26252447-A-AT	24106300-A-AT			P1_Y1			9×T		A*
6068017-C-CT	6199976-C-CT						10×T		A*
20869229-C-CT	18707343-C-CT			P4_Dst			22×T		A*
17794245-T-G	15682365-T-G				Y	Y			A*
13464430-G-T	11308754-G-T								A*
26089061-C-A	23942914-C-A			P1_Y1			20×A		A*
13818138-G-T	11697432-G-T								A*
23178689-T-C	21016803-T-C				Y				A*
26509419-A-G	24363272-A-G			P1_Y1					A*
3999815-G-A	4131774-G-A								A*
5357363-T-C	5489322-T-C								A*
13292727-C-T	11137051-C-T							*	A*
19874215-A-AT	17762335-A-AT			P5_Prx			10×T		A*
16162095-C-CA	14050215-C-CA			P8_Dst			19×A		A*
26101356-G-T	23955209-G-T			P1_Y1					A*
14069926-C-A	11949220-C-A				Y	Y		+
18286151-G-A	16174271-G-A	A9029	A9029	P6_Prx				+
13222396-GGAGA-G	11066720-GGAGA-G							+
13531710-A-AAAT	11376034-A-AAAT							+
13558911-C-T	11403235-C-T							+
13569460-A-T	11413784-A-T							+
17952562-G-A	15840682-G-A		FTB60642		Y	Y		+
3663316-T-TATATACAC	3795275-T-TATATACAC							+
14317308-AC-A	12196602-AC-A							+
17316056-AGG-A	15204176-AGG-A							+
19555381-G-A	17443501-G-A		FTB60930		Y			+
17316063-G-T	15204183-G-T				Y	Y		+
19532657-C-T	17420777-C-T		FTB60924		Y	Y		+
19484841-G-A	17372961-G-A		FTB60914		Y			+
16686302-C-CT	14574422-C-CT							+
17316060-C-T	15204180-C-T				Y	Y		+
21457814-A-G	19295928-A-G		FTB61028		Y			+
17316055-A-C	15204175-A-C				Y	Y		+
13929725-C-T	11809019-C-T	MC02	Z25926 F14415		Y			+
20613609-CT-C	18451723-CT-C			P4_Prx			13×T	+
	10763138-T-TTTCAC							+
	10763143-C-G							+
17081248-AAT-A	14969368-AAT-A						9×AT	+
6347777-G-GGAAA	6479736-G-GGAAA						9×GAAA	+
5996599-C-CTTT	6128558-C-CTTT						41×T	+
	10969991-C-CTCCACTCCA							+
7595397-CAG-C	7727356-CAG-C							+
17316026-ACAGCCAAAC-A	15204146-ACAGCCAAAC-A							+
17316038-TATC-T	15204158-TATC-T							+
3930762-A-ATATATATATACATATATATTT	4062721-A-ATATATATATACATATATATTT							+
17316052-G-GGTC	15204172-G-GGTC							+
21551693-A-G	19389807-A-G				Y				+
17316046-GCCAA-G	15204166-GCCAA-G							+
	56677988-G-C							+
28503527-T-A	26357380-T-A		FTB61438					+
28502098-C-T	26355951-C-T		FTB61437					+
23618222-T-C	21456336-T-C		FTB61383		Y	Y		+
22246639-A-T	20084753-A-T			DYZ19				+
5275051-C-G	5407010-C-G	L21/S145	L459					+
21329107-C-T	19167221-C-T		FTB61000		Y	Y		+
14030878-C-T	11910172-C-T	Z16500	Y16134		Y	Y		+
9950442-G-A	10112833-G-A				Y			+
23832832-T-C	21670946-T-C					Y		+
7524826-C-T	7656785-C-T				Y	Y		+
22319291-TCC-T	20157405-TCC-T			DYZ19				+
	10756735-AT-A							+
	10921118-C-CTCCATTCCAT							+
	10769382-C-CTCCAT							+
	56885287-T-A	MC02						+
	10794134-GCA-G	MC02						+
4331029-G-A	4462988-G-A	MC02	FT81352					+
	11022113-CTCCAT-C							+
13305319-G-T	11149643-G-T		FT268541						+
5147441-CAA-C	5279400-CAA-C						30×A	+
	56677989-G-A							+
	10916424-G-A		FT200142						+
	10763153-T-TTCCACTCCACTCCAC							+
	10756744-C-CCT							+
5976915-C-A	6108874-C-A		FTB68868					+
18717752-A-G	16605872-A-G		FTB60750		Y	Y		+
58912859-A-T	56678012-T-A							+
	10998005-A-T							+
	10832941-T-C							+
	10887326-A-ACCATTCCATT							+
15654428-C-G	13542548-C-G	L21/S145	L21 S145 M529		Y	Y		+
	10762519-C-T							+
16624849-C-T	14512969-C-T		FTB60396		Y			+
9082258-G-A	9244649-G-A	MC02	Y33399			Y		+
	10775255-T-TCACTC							+
58912865-G-C	56678006-C-G							+
	10756741-C-A							+
	10756746-A-C							+
6856706-C-CATAAATAA	6988665-C-CATAAATAA						8×ATAA	+
8575956-A-ATT	8707915-A-ATT						28×T	+
13960586-A-AGGAT	11839880-A-AGGAT						13×GGAT	+
5619594-G-A	5751553-G-A		FTB68859					+
5342086-G-A	5474045-G-A							+
5329093-G-C	5461052-G-C		FTB68849					+
4648193-G-A	4780152-G-A		FTB68840					+
4553982-G-A	4685941-G-A		FTB68838					+
4148665-C-G	4280624-C-G		FTB68834					+
3795537-T-C	3927496-T-C		FTB68827					+
3070262-A-G	3202221-A-G							+
2924303-C-T	3056262-C-T		FTB68812					+
22287053-T-A	20125167-T-A			DYZ19				+
	11014427-C-A							+
	10756748-C-T							+
25565654-GT-G	23419507-GT-G			P1_gr1			20×T	+
	10961181-CACTCCACTCCATTCA-C							+
	10969986-T-TTCAC							+
13963824-A-ATTTTTTTT	11843118-A-ATTTTTTTT						49×T	+
22802868-A-ATTTTTTTTTTTTTTTTTTTTTTTTTTT	20640982-A-ATTTTTTTTTTTTTTTTTTTTTTTTTTT						32×T	+
17316073-GACA-G	15204193-GACA-G							+
17319971-G-GAGAAAGAAAGAAAGAA	15208091-G-GAGAAAGAAAGAAAGAA						13×AGAA	+
	10969985-A-AC							+
	10756767-C-T							+
	10756756-ACGCCT-A							+
	10756753-A-T							+
	10756749-GT-G							+
17316064-TACCTAG-T	15204184-TACCTAG-T							+
13947567-C-T	11826861-C-T		FTB59956		Y			+
17316077-GT-G	15204197-GT-G							+
24365177-AAGAGAT-A	22219030-AAGAGAT-A						8×AGAGAT	+
9982991-G-A	10145382-G-A	Y45382	BY82444		Y			+
4284260-G-A	4416219-G-A		FTB78826						+
4750494-T-C	4882453-T-C		FT94382						+
4768931-G-A	4900890-G-A		FT244995						+
4977804-C-A	5109763-C-A		FT94395						+
16496000-T-TA	14384120-T-TA	S7421					8×A	+
17593567-G-C	15481687-G-C	MC02	MC02 Z17901		Y	Y		+
17904970-C-G	15793090-C-G	Y45382	Y53895		Y	Y		+
9163885-G-A	9326276-G-A	BY61543 Y45382	Y48276					+
3640987-T-TTTTCCTTTCC	3772946-T-TTTTCCTTTCC						11×TTTCC	+
5356255-CTGA-C	5488214-CTGA-C								+
5575489-G-A	5707448-G-A		FT94447						+
	11033035-C-A		FT268542						+
18812472-C-A	16700592-C-A	Y45382	Y54924		Y	Y		+
15212692-A-G	13100778-A-G		FT94618		Y	Y			+
19225417-G-A	17113537-G-A	Y45382	Y55555		Y	Y		+
4099375-A-G	4231334-A-G		FT94327						+
8393601-C-A	8525560-C-A	Y45382	Y47221		Y	Y		+
22977539-AATAC-A	20815653-AATAC-A						11×ATAC		+
2888825-C-T	3020784-C-T		Z32053		Y	Y		+
13809522-AGGAAT-A	11688816-AGGAAT-A						10×GGAAT	+
21551805-A-ATATGTATGTGTACATATATGTATGTATGTGTACATATATGTATG	19389919-A-ATATGTATGTGTACATATATGTATGTATGTGTACATATATGTATG							+
	56828962-T-G							+
22114006-A-AT	19952120-A-AT							+
23832834-T-C	21670948-T-C					Y		+
19492290-C-CAAAAAAA	17380410-C-CAAAAAAA						37×A	+
27936764-CA-C	25790617-CA-C			P1_Y2			15×A	+
6861764-C-T	6993723-C-T	Y45382	Y45382		Y	Y		+
19283984-C-CTATGG	17172104-C-CTATGG						7×TATGG	+
4439911-TGCAGCTTCACTCCTGAGG-T	4571870-TGCAGCTTCACTCCTGAGG-T	Z39589	Z39589					+
22319290-G-GAA	20157404-G-GAA			DYZ19				+
3268768-T-C	3400727-T-C		FT94273						+
24422478-C-CAAAAAAAAA	22276331-C-CAAAAAAAAA						43×A	+
7811849-C-T	7943808-C-T	Y45382	ZS3854		Y	Y		+
4619767-C-A	4751726-C-A	S552	FGC3218 S552 Y2598					+
7892072-G-A	8024031-G-A	Y45382	Y46580		Y	Y		+
15369896-C-T	13258016-C-T		FT94623		Y				+
	56828963-C-T							+
20823468-G-T	18661582-G-T	Y45382	Y56121	P4_Gap				+
21778034-C-A	19616148-C-A	Y45382	Y57191		Y	Y		+
22479227-T-C	20317341-T-C	Y45382	BY53237	DYZ19				+
22569849-A-T	20407963-A-T	Y45382	Y57966		Y	Y		+
23093721-C-T	20931835-C-T		FT94769		Y				+
2836431-A-C	2968390-A-C	DF13	CTS241 DF13 S521		Y	Y		+
28632468-G-C	26486321-G-C	Z290	S461 Z290			Y		+
23453412-T-C	21291526-T-C	Y45382	Y59194		Y	Y		+
19334567-C-T	17222687-C-T	Y45382	Y55730		Y	Y		+
23832827-T-C	21670941-T-C					Y		+
17885577-C-T	15773697-C-T	DF13	CTS8221 Z2542		Y			+
17681656-C-T	15569776-C-T	Z16500	Z16500 Y5305		Y	Y		+
22463448-G-C	20301562-G-C	Y45382	BY221124	DYZ19				+
22168972-G-C	20007086-G-C		FT94755		Y				+
22272444-A-C	20110558-A-C	Y45382	FT454457	DYZ19				+
17000698-C-A	14888818-C-A				Y				+
17316080-CT-C	15204200-CT-C							+
23832828-T-C	21670942-T-C					Y		+
17316084-CTCTG-C	15204204-CTCTG-C							+
21775730-T-C	19613844-T-C	Y45382	Y57185		Y	Y		+
17316100-G-A	15204220-G-A				Y	Y		+
21724093-G-A	19562207-G-A		FTB74062		Y	Y			+
17316099-T-A	15204219-T-A				Y	Y		+
17316090-AGG-A	15204210-AGG-A							+
22200784-C-G	20038898-C-G	Z290	S245 Z245		Y	Y		+
17316093-TG-T	15204213-TG-T							+
24411932-G-T	22265785-G-T	Z290	Z260			Y		+
4650524-C-T	4782483-C-T							*
21078613-A-T	18916727-A-T				Y			*
9556485-C-CT	9718876-C-CT			IR3_Prx			9×T	*
18512058-G-GT	16400178-G-GT			P6_Dst			9×T	*
	10686664-T-A							*
	56838109-T-C							*
15208845-CAA-C,CAAA	13096931-CAA-C,CAAA						23×A	*
3561500-CAAA-C	3693459-CAAA-C						25×A	*
13931739-CTTTT-C	11811033-CTTTT-C						22×T	*
8470549-CA-C,CAA	8602508-CA-C,CAA						22×A	*
18195154-ATTT-A,ATT	16083274-ATTT-A,ATT						29×T	*
5253170-CT-C,CTT	5385129-CT-C,CTT						23×T	*
17926534-CAA-C,CA	15814654-CAA-C,CA						25×A	*
5395446-A-T	5527405-A-T							*
	10892173-C-T							*
6929132-C-CT	7061091-C-CT						26×T	*
17446755-C-A	15334875-C-A				Y	Y		*
	56827988-C-G							*
5502254-CAAA-C	5634213-CAAA-C						16×A	*
4773481-CTTT-C,CTT	4905440-CTTT-C,CTT						25×T	*
3427709-C-G	3559668-C-G		FGC81636						*
4269800-C-A	4401759-C-A							*
21096458-C-CAA	18934572-C-CAA						16×A	*
	10673509-TTCC-T							*
3270924-ATTTT-A	3402883-ATTTT-A						25×T	*
17431152-GT-G	15319272-GT-G						10×T	*
23181453-C-CAA	21019567-C-CAA						34×A	*
15733879-CA-C,CAA	13621999-CA-C,CAA						25×A	*
21175749-CA-C,CAA	19013863-CA-C,CAA						27×A	*
28817647-AGGAATGGAAT-A,AGGAAT	26671500-AGGAATGGAAT-A,AGGAAT						9×GGAAT	*
4807246-C-A	4939205-C-A							*
28017356-C-CAA	25871209-C-CAA			P1_Y2			16×A	*
15410667-C-G	13298787-C-G				Y	Y		*
4114451-CAGAGAGAG-C,CAGAG	4246410-CAGAGAGAG-C,CAGAG						19×AG	*
19146569-CTT-C,CT	17034689-CTT-C,CT						28×T	*
5960696-ATT-A,ATTT	6092655-ATT-A,ATTT						30×T	*
6089764-GT-G,GTT	6221723-GT-G,GTT						31×T	*
5770338-CT-C,CTT	5902297-CT-C,CTT						25×T	*
16666079-AT-A,ATT	14554199-AT-A,ATT						25×T	*
18290737-C-A	16178857-C-A			P6_Prx				*
18804474-AAGAGAG-A,AAGAG	16692594-AAGAGAG-A,AAGAG						26×AG	*
23773323-T-TAC,TACAC	21611437-T-TAC,TACAC						24×AC	*
9804878-A-G	9967269-A-G				Y			*
9429480-TAA-T,TA	9591871-TAA-T,TA						18×A	*
16250624-GTTT-G,GTTTT	14138744-GTTT-G,GTTTT						28×T	*
4583025-GTT-G	4714984-GTT-G						27×T	*
28814167-G-T	26668020-G-T							*
5972473-T-C	6104432-T-C							*
	10673506-CGA-C							*
18290801-G-T	16178921-G-T			P6_Prx				*
13611988-GT-G,GTT	11456312-GT-G,GTT						19×T	*
15410633-CAAAA-C,CAAA	13298753-CAAAA-C,CAAA						28×A	*
9640889-TTGTGTG-T,TTG	9803280-TTGTGTG-T,TTG			IR3_Prx			22×TG	*
	56830540-TGCTGAATTCCATTGCATTCC-T,TATTGCATTCC							*
4983174-A-ATT	5115133-A-ATT						28×T	*
6091720-ATT-A,AT	6223679-ATT-A,AT						28×T	*
4650526-C-T	4782485-C-T							*
5378192-CAA-C	5510151-CAA-C						21×A	*
22464679-C-T	20302793-C-T			DYZ19				*
23293598-GTATATA-G,GTA	21131712-GTATATA-G,GTA						20×TA	*
3403267-A-C	3535226-A-C							*
	10686708-T-TTCCGC							*
15592550-CA-C,CAA	13480670-CA-C,CAA						22×A	*
18937647-GCAATACAATA-G,GCAATA	16825767-GCAATACAATA-G,GCAATA						13×CAATA	*
7199342-CT-C,CTT	7331301-CT-C,CTT						24×T	*
28814166-G-T	26668019-G-T							*
	56833823-A-ACGATT							*
5203779-TAA-T,TA	5335738-TAA-T,TA						24×A	*
	56871623-T-TAAAAAA						9×A	*
2888870-CAAAA-C	3020829-CAAAA-C						32×A	*
5381061-TTTTA-T	5513020-TTTTA-T						6×TTTA	*
21085779-CAA-C,CA	18923893-CAA-C,CA						24×A	*
13722699-T-A	11567023-T-A							*
13455107-CCCTGTTTGTTTCCTT-C	11299431-CCCTGTTTGTTTCCTT-C							*
14324894-C-CTT	12204188-C-CTT						26×T	*
28721498-TC-T	26575351-TC-T							*
16290775-GTATA-G,GTA	14178895-GTATA-G,GTA						19×TA	*
4778200-TA-T	4910159-TA-T						11×A	*
	56844858-G-C							*
15336019-CAAAAAA-C	13224137-CAAAAAA-C						30×A	*
13883999-A-G	11763293-A-G				Y			*
13884008-G-T	11763302-G-T				Y			*
13386608-T-TA	11230932-T-TA						12×A	*
2807024-TTATA-T,TTA	2938983-TTATA-T,TTA						20×TA	*
28543953-CA-C	26397806-CA-C						11×A	*
	56826133-G-A							*
5430848-C-A	5562807-C-A							*
	10772450-C-T							*
4836963-A-AT	4968922-A-AT						11×T	*
	56844856-T-C							*
14774253-CT-C,CTT	12662322-CT-C,CTT						28×T	*
	10673563-ACTCCT-A							*
8428974-C-A	8560933-C-A				Y	Y		*
16904710-C-A	14792830-C-A				Y	Y		*
6059092-CAA-C	6191051-CAA-C						25×A	*
5631285-A-AT	5763244-A-AT						13×T	*
28468253-C-CT	26322106-C-CT						13×T	*
28816449-G-T	26670302-G-T							*
3499681-TA-T	3631640-TA-T						10×A	*
3707259-C-CAT	3839218-C-CAT							*
14203018-C-CAT	12082312-C-CAT							*
19052414-C-CAA	16940534-C-CAA						24×A	*
13712712-C-T	11557036-C-T							*
13718094-G-A	11562418-G-A							*
13722700-C-T	11567024-C-T							*
	10992268-T-A							*
13447078-A-T	11291402-A-T							*
6440991-TAAA-T	6572950-TAAA-T						19×A	*
20778781-TTGTG-T	18616895-TTGTG-T			P4_Prx			18×TG	*
13214292-T-C	11058616-T-C							*
18297907-TGA-T	16186027-TGA-T			P6_Prx				*
5471896-AAAAGAAAG-A,AAAAG	5603855-AAAAGAAAG-A,AAAAG						17×AAAG	*
16904711-T-A	14792831-T-A				Y	Y		*
26437169-CAA-C	24291022-CAA-C			P1_Y1			28×A	*
5520571-G-GA	5652530-G-GA						11×A	*
	10673626-T-C							*
18255888-TA-T,TAA	16144008-TA-T,TAA						22×A	*
8428979-C-A	8560938-C-A				Y	Y		*
5486876-CAAA-C	5618835-CAAA-C						21×A	*
5904031-CAAAA-C	6035990-CAAAA-C						27×A	*
	56834906-T-TC							*
	10892183-C-T							*
18846011-CA-C	16734131-CA-C						25×A	*
16297330-GT-G,GTT	14185450-GT-G,GTT						26×T	*
3809136-ATTTTT-A	3941095-ATTTTT-A						31×T	*
5752261-C-A	5884220-C-A							*
6525768-CAA-C	6657727-CAA-C						24×A	*
28814157-G-T	26668010-G-T							*
	56833347-ATTC-A							*
7258755-CAAA-C	7390714-CAAA-C						25×A	*
	10673601-C-T							*
	56857748-T-A							*
	56832964-C-CACTCCATTCT							*
4377969-CT-C,CTT	4509928-CT-C,CTT						19×T	*
	56867491-ATTTTTTTTT-A,ATATT						11×T		*
4848574-GT-G	4980533-GT-G						29×T	*
	56832956-T-TTACATTCCACTCCACTCCAC							*
	56856103-C-CA						14×A	*
	12903343-CTTTT-C,CTTT						25×T	*
7282159-CTT-C,CT	7414118-CTT-C,CT						22×T	*
13611405-CAAA-C	11455729-CAAA-C						16×A	*
	10673617-C-A							*
	56834907-TACATGTCAA-T							*
23747205-CTTTTTTT-C	21585319-CTTTTTTT-C						29×T	*
	10972115-GT-G							*
4981758-T-TA	5113717-T-TA						11×A	*
	56833851-A-ACTCCACTCTT							*
15151502-CA-C,CAA	13039589-CA-C,CAA						23×A	*
28816448-G-T	26670301-G-T							*
22894151-GAAA-G	20732265-GAAA-G						28×A	*
4019672-TA-T	4151631-TA-T						13×A	*
4571069-C-CA	4703028-C-CA						13×A	*
13257464-G-A	11101788-G-A							*
5213710-C-CT	5345669-C-CT						12×T	*
13591661-A-AT	11435985-A-AT						8×T	*
9747142-T-G	9909533-T-G							*
	56834920-T-TTCA							*
6093470-T-TG	6225429-T-TG						12×G	*
16710763-GTA-G,GTATA	14598883-GTA-G,GTATA						14×TA	*
15558844-A-AT	13446964-A-AT						10×T	*
15410672-A-T	13298792-A-T				Y	Y		*
13540314-C-A	11384638-C-A							*
7166642-T-TA	7298601-T-TA							*
28369974-C-A	26223827-C-A			P1_gr2				*
	56873364-A-AAC,AACAC						20×AC	*
	56843715-A-C							*
	10673583-A-T							*
28814162-C-G	26668015-C-G							*
	56827687-T-C,TGCCATCCTATTC							*
13448144-CTA-C	11292468-CTA-C							*
18039366-ATT-A,ATTT	15927486-ATT-A,ATTT						30×T	*
7567753-C-CT,CTT	7699712-C-CT,CTT						25×T	*
7573175-A-C	7705134-A-C				Y			*
	8201919-T-							*
8125062-G-GAGAGA,GAGAGAAGAGA	8257021-G-GAGAGA,GAGAGAAGAGA						12×AGAGA	*
8167170-A-G	8299129-A-G				Y			*
8481026-ATGTG-A	8612985-ATGTG-A							*
9503771-A-ATATC,ATATCTATC	9666162-A-ATATC,ATATCTATC						12×TATC	*
	9803283-TGTGTG-			IR3_Prx				*
	10663382-C-							*
	10762937-GTTCCATTCCATTCCACCCCA-G							*
	10762977-ATTCCACTCCCCTCCTTTCCATTCCACTCCATTCCATTCCATTCCACTGCATTCCATTCTATTCCATTACACTCCCTTCCACTCCATTCCACTCCC-A							*
	7388053-A-							*
17946946-G-GTTTT	15835066-G-GTTTT							*
17946943-TGAG-T	15835063-TGAG-T							*
	10785046-T-A							*
	10821428-A-AATCTG							*
	10821432-C-CG							*
	10821434-TTACA-T							*
	10821440-T-C							*
	10821443-T-TCTA							*
	10892168-T-A							*
	10892178-C-T							*
17923882-T-TG	15812002-T-TG							*
	7414120-T-							*
7100939-C-A	7232898-C-A				Y			*
	10935459-TTCCAGTCCACTCCAATCCCTTCCAATCCACTCCACTCCATTCCAGTCCACTCCATTCCACTCCTTTCCACTACATTCCATTCCACTCCACTCCATTCCAGTCCATTCCATTCCACTCCAC-T							*
18401199-CAA-C,CAAA	16289319-CAA-C,CAAA			P6_Gap			30×A	*
2930319-GT-G,GTTT	3062278-GT-G,GTTT						26×T	*
3081812-C-CAA	3213771-C-CAA						33×A	*
3633239-G-A	3765198-G-A							*
3909109-C-CAAAAAA	4041068-C-CAAAAAA						22×A	*
19071363-A-C	16959483-A-C				Y			*
18846045-C-A	16734165-C-A				Y			*
4392282-C-CAAAA,CAAAA	4524241-C-CAAAA,CAAAA						45×A	*
4427327-A-G	4559286-A-G							*
4427523-A-G	4559482-A-G							*
4735573-C-T	4867532-C-T							*
	5129480-G-							*
6929169-A-T	7061128-A-T				Y			*
5036591-T-C	5168550-T-C							*
5128384-G-A	5260343-G-A							*
5235774-T-C	5367733-T-C							*
5770336-G-T	5902295-G-T							*
5905890-CA-C,CAA	6037849-CA-C,CAA						27×A	*
5936147-G-GTGTGT	6068106-G-GTGTGT							*
18292597-A-G	16180717-A-G			P6_Prx				*
18067401-TAGAA-T,T	15955521-TAGAA-T,T						15×AGAA	*
6784476-G-T	6916435-G-T				Y	Y	23×A	*
6929163-TAGG-T	7061122-TAGG-T							*
6929167-A-T	7061126-A-T				Y			*
	10924725-T-A							*
	10936683-GTTCCA-G							*
2803533-A-C	2935492-A-C				Y	Y		*
14532372-G-C	12420573-G-C				Y			*
13936205-G-GAAGAAAGA,GAAGAAAGAAAGA	11815499-G-GAAGAAAGA,GAAGAAAGAAAGA						14×AAGA	*
13977204-C-CA	11856498-C-CA							*
13977211-T-A	11856505-T-A				Y			*
13977217-G-A	11856511-G-A				Y			*
14114867-GT-G	11994161-GT-G							*
14331131-C-CTTTTTTTTTTT	12210425-C-CTTTTTTTTTTT						25×T	*
14456670-CAG-C	12335943-CAG-C							*
14456673-C-T	12335946-C-T				Y			*
14464762-G-GTGGTATGATCTT	12344035-G-GTGGTATGATCTT							*
14532368-CGA-C	12420569-CGA-C							*
	12497709-CTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAT-C							*
13518171-A-G	11362495-A-G							*
14612335-TGATA-T,T	12500541-TGATA-T,T						12×GATA	*
17446767-CT-C,CTTT	15334887-CT-C,CTTT						33×T	*
14727319-ATTT-A,ATTTT	12615387-ATTT-A,ATTTT						23×T	*
14796196-T-G	12684267-T-G				Y			*
15128121-CTTTT-C,CTTT	13016208-CTTTT-C,CTTT						18×T	*
	13197843-C-CAAAA,CAAAAA						42×A	*
16505988-C-CTTT,CTTT	14394108-C-CTTT,CTTT						31×T	*
16692757-GAA-G,TAA	14580877-GAA-G,TAA						27×A	*
17030757-ATT-A,ATTT	14918877-ATT-A,ATTT						24×T	*
17281991-TGATA-T,T	15170111-TGATA-T,T						7×GATA	*
17441175-A-AAT,AATAT	15329295-A-AAT,AATAT						20×AT	*
13923558-A-AATATAT,T	11802852-A-AATATAT,T						20×AT	*
13455129-CCATTCCATTCCATTCCATTCCATTCCATTCCACTCCACTCTGTTG-C	11299453-CCATTCCATTCCATTCCATTCCATTCCATTCCACTCCACTCTGTTG-C							*
	10954739-T-A							*
13447563-CCATTCCATTGCATTCCATTGTATTCCATTCCATTGCAATGCATTCAATTCCATTCCATCCCATTCCGTTCCACTCCTGCGAGCTCCACTCCACTCCACTCCACTG-C	11291887-CCATTCCATTGCATTCCATTGTATTCCATTCCATTGCAATGCATTCAATTCCATTCCATCCCATTCCGTTCCACTCCTGCGAGCTCCACTCCACTCCACTCCACTG-C							*
17662167-GTAGATAGA-G,G	15550287-GTAGATAGA-G,G						16×TAGA	*
	11017517-TCCAGC-T							*
17597920-G-GA,GAA	15486040-G-GA,GAA						11×A	*
	11022419-A-ACTCCACTCCACTCCAGTCCACTCCACTCCATTCCATTCTACTCCT							*
13199164-CAAA-C,CAAAA	11043488-CAAA-C,CAAAA						18×A	*
13252718-C-T	11097042-C-T							*
13254004-T-G	11098328-T-G							*
13292048-G-C	11136372-G-C							*
13292076-A-T	11136400-A-T							*
13354219-C-T	11198543-C-T							*
13447551-CTCCGT-C	11291875-CTCCGT-C							*
13451211-C-CCATTCCATTCCATTCCACGT	11295535-C-CCATTCCATTCCATTCCACGT							*
13455035-TATTCCATTCCATTCCATTCCATTGCATTCC-T	11299359-TATTCCATTCCATTCCATTCCATTGCATTCC-T						4×ATTCC	*
13451967-C-T	11296291-C-T							*
13451971-TCCACTCCA-T	11296295-TCCACTCCA-T							*
	11296296-CCACTCCACACCACTCCACTGCTCTCCAATCCACTCCAATCCATTCCACTCCAGTCCATTCCAATCCATTCCACTCTACGCCATAACATTAAGCTCCACTCCACTCCATTCCATTCCACCACACTCCACCCCATTCCATTCCACTTGATTCCATTCCACTGCACTCCATTCCACCCCCATCCACTCCATTCCAGTCCACTCCACTCAACTCCATTCCATTCCACACCAATCCGTTCCACTCCATTT-							*
13452014-A-T	11296338-A-T							*
13452029-ATTCCAATCCATTCCACTCTACGCCATAACATTAAG-A	11296353-ATTCCAATCCATTCCACTCTACGCCATAACATTAAG-A							*
13452073-CA-C	11296397-CA-C							*
13452090-CCACACTCCACCCCATTCCATTCCACTTGATTCCAT-C	11296414-CCACACTCCACCCCATTCCATTCCACTTGATTCCAT-C							*
13452132-GCACTCCATTCCACCCC-G	11296456-GCACTCCATTCCACCCC-G							*
13452151-T-TG	11296475-T-TG							*
13452160-TTCCAGTCCACTCCACTCAAC-T	11296484-TTCCAGTCCACTCCACTCAAC-T							*
17543962-TA-T,T	15432082-TA-T,T						11×A	*
19125694-C-CA,CAA	17013814-C-CA,CAA						24×A	*
2729648-CT-C,CTTTT	2861607-CT-C,CTTTT						25×T	*
13448148-T-TCC	11292472-T-TCC							*
	56834415-T-TTCCTCTCCAC							*
	10693319-C-CACACATTTCGTT							*
	10693322-A-ACCGTTG							*
19138043-AATATATATATTCCACTATATATATAT-A	17026163-AATATATATATTCCACTATATATATAT-A							*
	56834779-G-GCGTTC						4×CATTC	*
28545880-CA-C,CAA	26399733-CA-C,CAA						20×A	*
21620494-GTACTA-G,G	19458608-GTACTA-G,G						12×TACTA	*
	56826866-CCATTCCATTCGAGACTGTACTATTACACTCCATTCGATTCCATTCCATTCGATTA-							*
28437292-G-GA	26291145-G-GA			P1_gr2			9×A	*
23114014-A-AAT,AATATAT	20952128-A-AAT,AATATAT						22×AT	*
	56834405-C-CTCCACTCCTG							*
16868746-CATATATAT-C,CATAT	14756866-CATATATAT-C,CATAT						22×AT	*
3800092-AACACAC-A,AAC	3932051-AACACAC-A,AAC						17×AC	*
28023633-T-G	25877486-T-G			P1_Y2				*
13476890-A-C	11321214-A-C							*
13447066-C-T	11291390-C-T							*
22269433-C-T	20107547-C-T			DYZ19				*
22269442-T-G	20107556-T-G			DYZ19				*
14532363-T-TGCCC	12420564-T-TGCCC							*
27936325-G-GA	25790178-G-GA			P1_Y2			10×A	*
15752638-C-CCTT,CCTTCTT	13640758-C-CCTT,CCTTCTT						25×CTT	*
8644324-C-CAAA,CAAA	8776283-C-CAAA,CAAA						32×A	*
27839897-A-T	25693750-A-T			P1_Y2				*
24884168-CTT-C	22738021-CTT-C			g1			20×T	*
5430840-G-T	5562799-G-T							*
8901076-CAT-C,CATAT	9033035-CAT-C,CATAT						15×AT	*
	56827984-C-CATTAAA							*
13450843-C-CCCCA	11295167-C-CCCCA							*
	56834188-TTA-T							*
6402075-G-GTATATCTTATATTCAC	6534034-G-GTATATCTTATATTCAC							*
6402077-G-GGTGTCGTAAAATACTGACGTA	6534036-G-GGTGTCGTAAAATACTGACGTA							*
	56834514-TCTCCATTCCATTCCACTCCACTCCATTCCATACCATTCCATTCCA-T							*
	56836153-T-TTCCGC							*
	56871627-A-AT							*
	10661296-T-TCCACTC							*
28778852-C-CTTTT,CTTTTT	26632705-C-CTTTT,CTTTTT						33×T	*
	56871655-A-ATAT							*
	56825934-T-TAATTCCATTCGATTG							*
13450844-T-TCCCACA	11295168-T-TCCCACA							*
13540253-A-AAC,AACAC	11384577-A-AAC,AACAC						23×AC	*
28748329-T-C	26602182-T-C							*
22510299-C-G	20348413-C-G			DYZ19				*
28619323-T-G	26473176-T-G							*
13451481-TTCTA-T	11295805-TTCTA-T							*
13451488-CT-C	11295812-CT-C							*
13429347-T-C	11273671-T-C							*
13451199-T-TTCCAC	11295523-T-TTCCAC							*
5945467-C-CTTT	6077426-C-CTTT						25×T	*
4936053-CA-C,CAA	5068012-CA-C,CAA						26×A	*
28619320-A-C	26473173-A-C							*
23006086-G-GT	20844200-G-GT						8×T	*
18411871-G-T	16299991-G-T			P6_Gap				*
20835458-T-G	18673572-T-G			P4_Gap				*
19226188-AATAGATAG-A,A	17114308-AATAGATAG-A,A						14×ATAG	*
21109633-C-T	18947747-C-T				Y			*
22253436-G-C	20091550-G-C			DYZ19				*
6052859-C-CT	6184818-C-CT						11×T	*
22167224-C-CAAAAAAAAAAAAA	20005338-C-CAAAAAAAAAAAAA						29×A	*
21853677-C-CAAA,CAAA	19691791-C-CAAA,CAAA						43×A	*
21665705-T-TAATAAATA,TAATAAATA	19503819-T-TAATAAATA,TAATAAATA						13×AATA	*
21553403-CTTT-C,CTT	19391517-CTTT-C,CTT						31×T	*
21475542-T-A	19313656-T-A				Y			*
20640176-C-T	18478290-C-T			P4_Prx				*
21411718-CAAAA-C,CAAAAA	19249832-CAAAA-C,CAAAAA						31×A	*
21402181-CT-C,CTTTT	19240295-CT-C,CTTTT						34×T	*
21050838-TTATC-T,T	18888952-TTATC-T,T						10×TATC	*
22253446-G-C	20091560-G-C			DYZ19				*
20815462-T-G	18653576-T-G			P4_Gap			12×AC	*
20815458-T-G	18653572-T-G			P4_Gap				*
20363066-GAAAC-G	18201180-GAAAC-G			P5_Dst			5×AAAC	*
20305768-TA-T	18143882-TA-T			P5_Dst			9×A	*
19500593-GAGAAAGAA-G,G	17388713-GAGAAAGAA-G,G						15×AGAA	*
19500150-GTAGATAGATAGA-G,G	17388270-GTAGATAGATAGA-G,G						14×TAGA	*
19393098-CT-C,CTTT	17281218-CT-C,CTTT						30×T	*
19126436-C-CAAAAAAAAA,CAAAAAAAAAAA	17014556-C-CAAAAAAAAA,CAAAAAAAAAAA						25×A	*
4175134-AT-A	4307093-AT-A						8×T	*
	10889266-GCCATT-G,G							*
17731014-C-CA	15619134-C-CA						35×A	*
22253438-G-A	20091552-G-A			DYZ19				*
22270035-C-T	20108149-C-T			DYZ19				*
	56832357-C-CCACTCCTTTCAACTCCACTCCCCTCCAA							*
24283189-G-T	22137042-G-T			P3_t1				*
22312649-A-G	20150763-A-G			DYZ19				*
22312661-T-A	20150775-T-A			DYZ19				*
24614413-GA-G	22468266-GA-G			P3_t2			10×A	*
13252722-A-G	11097046-A-G							*
	56834380-T-TTCCATTCCATTCCAC,TTCCGTTCAATTCCTC							*
24575876-CTT-C,CT	22429729-CTT-C,CT			P3_t2			24×T	*
6699020-ATTT-A,ATT	6830979-ATTT-A,ATT						24×T	*
3838601-C-CTT	3970560-C-CTT						31×T	*
	56833475-T-							*
	56833736-TCC-T							*
	56833739-A-AAG							*
	56833841-A-AT							*
22437822-C-T	20275936-C-T			DYZ19				*
24283184-C-A	22137037-C-A			P3_t1				*
	21105159-T-							*
23241950-T-G	21080064-T-G				Y			*
23063698-TTTTA-T,T	20901812-TTTTA-T,T						10×TTTA	*
22713350-G-A	20551464-G-A				Y			*
22473135-G-T	20311249-G-T		BY222856	DYZ19				*
22473134-G-C	20311248-G-C		FT459392	DYZ19				*
22473131-G-A	20311245-G-A		FT459389	DYZ19				*
22468501-G-C	20306615-G-C			DYZ19				*
22468493-T-A	20306607-T-A			DYZ19				*
22468489-T-C	20306603-T-C			DYZ19				*
6468926-TAA-T	6600885-TAA-T						28×A	*
19510300-A-T	17398420-A-T				Y	Y		*
17081290-T-A	14969410-T-A				Y	Y		*
9871665-TAC-T	10034056-TAC-T						8×AC	*
24425365-ATG-A	22279218-ATG-A						8×TG	*
59001559-G-A	56855412-G-A							*
59021928-G-GTTTT	56875781-G-GTTTT						9×T	*
8462064-C-CA	8594023-C-CA						26×A	*
7461754-G-GTT	7593713-G-GTT			IR1_L			23×T	*
26320658-TA-T	24174511-TA-T			P1_Y1			14×A	*
5042180-G-GAT	5174139-G-GAT						17×AT	*
28633965-T-TA	26487818-T-TA						10×A	*
17187566-CAA-C	15075686-CAA-C						28×A	*
5776576-G-GA	5908535-G-GA						13×A	*
13271775-T-TA	11116099-T-TA						12×A	*
5551548-T-G	5683507-T-G		Z1987					*
21412261-C-CTT	19250375-C-CTT						36×T	*
23766562-AAC-A	21604676-AAC-A							*
3172631-G-A	3304590-G-A							*
3200161-A-C	3332120-A-C		FT316405					*
3331462-AAT-A	3463421-AAT-A						8×AT	*
3930620-AAC-A	4062579-AAC-A						8×AC	*
4585401-A-G	4717360-A-G							*
5087317-C-T	5219276-C-T							*
5139530-A-T	5271489-A-T							*
5552714-C-T	5684673-C-T							*
5634233-A-T	5766192-A-T							*
5639052-G-T	5771011-G-T							*
5980639-C-T	6112598-C-T							*
7325053-GTA-G	7457012-GTA-G							*
7543900-AAT-A	7675859-AAT-A							*
23851470-ATG-A	21689584-ATG-A						9×TG	*
21087755-CCT-C	18925869-CCT-C						8×CT	*
13449956-CCCATT-C	11294280-CCCATT-C							*
6948092-G-GTT	7080051-G-GTT						31×T	*
5086968-A-T	5218927-A-T							*
5137411-G-C	5269370-G-C		Z8629					*
5139407-A-G	5271366-A-G							*
5378471-A-G	5510430-A-G							*
5554844-C-T	5686803-C-T							*
5607994-G-T	5739953-G-T							*
5637843-C-A	5769802-C-A							*
5637881-C-T	5769840-C-T							*
5646107-AAT-A	5778066-AAT-A							*
5679938-T-C	5811897-T-C							*
5786159-AAC-A	5918118-AAC-A						8×AC	*
6089296-GAT-G	6221255-GAT-G						10×AT	*
6598964-G-A	6730923-G-A							*
7285285-AAT-A	7417244-AAT-A							*
19309422-C-CAT	17197542-C-CAT						19×AT	*
7428072-A-G	7560031-A-G				Y	Y		*
7428075-G-C	7560034-G-C				Y	Y		*
7428091-A-C	7560050-A-C		CTS1471		Y	Y		*
8462091-G-A	8594050-G-A				Y	Y		*
8644547-CTA-C	8776506-CTA-C						8×TA	*
13254020-C-T	11098344-C-T							*
13451191-T-TC	11295515-T-TC							*
14295541-CGT-C	12174835-CGT-C						8×GT	*
14297038-CTA-C	12176332-CTA-C						10×TA	*
14567704-GGT-G	12455904-GGT-G						8×GT	*
16134549-TAC-T	14022669-TAC-T						10×AC	*
16508482-GTAA-G	14396602-GTAA-G						8×TAA	*
18511565-C-CAT	16399685-C-CAT			P6_Dst			20×AT	*
13203742-GTGA-G	11048066-GTGA-G						5×TGA	*
13687959-G-A	11532283-G-A							*
4559967-G-T	4691926-G-T							*
13578034-C-CA	11422358-C-CA						14×A	*
15518278-CT-C	13406398-CT-C						10×T	*
4539217-GA-G	4671176-GA-G						15×A	*
4282565-A-G	4414524-A-G	MC02	Y18169					*
3351783-A-G	3483742-A-G							*
13718874-C-A	11563198-C-A							*
7464037-CA-C	7595996-CA-C			IR1_L			19×A	*
17086602-C-CAT	14974722-C-CAT						22×AT	*
5936159-GAT-G	6068118-GAT-G						19×AT	*
18468353-GA-G	16356473-GA-G			P6_Dst			13×A	*
16913422-C-CA	14801542-C-CA						21×A	*
2984950-C-CTA	3116909-C-CTA						16×TA	*
6349176-C-CT	6481135-C-CT						12×T	*
3076069-C-CT	3208028-C-CT						25×T	*
5587108-A-C	5719067-A-C		A13692					*
13476975-A-C	11321299-A-C							*
20815408-C-CATATATAT	18653522-C-CATATATAT			P4_Gap			22×AT	*
6944943-C-CA	7076902-C-CA						28×A	*
28492689-CAAA-C	26346542-CAAA-C						18×A	*
6539997-C-CA	6671956-C-CA						13×A	*
17703236-T-TA	15591356-T-TA						22×A	*
19250664-G-GTTTT	17138784-G-GTTTT						45×T	*
22662289-G-GT	20500403-G-GT						13×T	*
5344471-TA-T	5476430-TA-T						37×A	*
21895600-TA-T	19733714-TA-T						12×A	*
23850755-TA-T	21688869-TA-T						10×A	*
3253170-CTT-C	3385129-CTT-C						22×T	*
22437889-C-T	20276003-C-T		BY218446	DYZ19				*
4826400-TTA-T	4958359-TTA-T						22×TA	*
21940037-CAT-C	19778151-CAT-C						22×AT	*
13718826-G-A	11563150-G-A							*
58993119-C-A	56846972-C-A							*
14311874-TTTA-T	12191168-TTTA-T						6×TTA	*
18609322-TCA-T	16497442-TCA-T						8×CA	*
19510294-A-T	17398414-A-T				Y	Y		*
21083512-TAG-T	18921626-TAG-T							*
21269482-CCA-C	19107596-CCA-C							*
22269439-A-T	20107553-A-T		BY38154	DYZ19				*
22903820-ATG-A	20741934-ATG-A							*
23415294-ATATATG-A	21253408-ATATATG-A							*
28470598-CTA-C	26324451-CTA-C							*
28545016-CAA-C	26398869-CAA-C						22×A	*
58981320-C-G	56835173-C-G							*
58981677-A-G	56835530-A-G							*
58982588-T-C	56836441-T-C							*
59001513-G-A	56855366-G-A							*
8631383-CTTTTT-C	8763342-CTTTTT-C						26×T	*
23551264-C-CGT	21389378-C-CGT	22107634CGTGT-C					14×GT	*
21922080-CAA-C	19760194-CAA-C						23×A	*
5036583-CAT-C	5168542-CAT-C						27×AT	*
5088451-CTTTT-C	5220410-CTTTT-C						27×T	*
6597876-CT-C	6729835-CT-C						10×T	*
8406123-TA-T	8538082-TA-T	FTA81879					10×A	*
18317461-TAA-T	16205581-TAA-T			P6_Prx			15×A	*
28600983-ATTT-A	26454836-ATTT-A						17×T	*
21717648-A-ATG	19555762-A-ATG						17×TG	*
6858592-C-CTTTT	6990551-C-CTTTT						25×T	*
14862939-A-AT	12751005-A-AT						12×T	*
58981073-T-C	56834926-T-C							*
23070772-CT-C	20908886-CT-C						29×T	*
4560606-C-T	4692565-C-T		FT238593					*
4559964-C-T	4691923-C-T							*
8016710-CA-C	8148669-CA-C						8×A	*
7643329-GGA-G	7775288-GGA-G						9×GA	*
15909754-C-CATAT	13797874-C-CATAT						18×AT	*
7162654-T-TA	7294613-T-TA						10×A	*
16308486-C-CT	14196606-C-CT						25×T	*
20804885-GTA-G	18642999-GTA-G			P4_Gap			15×TA	*
27994688-T-TA	25848541-T-TA			P1_Y2			13×A	*
27918646-GT-G	25772499-GT-G			P1_Y2			11×T	*
18982547-C-CAA	16870667-C-CAA						39×A	*
21438785-TAA-T	19276899-TAA-T						31×A	*
20332111-C-CA	18170225-C-CA			P5_Dst			30×A	*
3545398-G-GT	3677357-G-GT						13×T	*
13450879-A-ACCACTCCACTCCTCTCCCCAACACT	11295203-A-ACCACTCCACTCCTCTCCCCAACACT							*
17251895-C-CA	15140015-C-CA						11×A	*
17348297-CAA-C	15236417-CAA-C						17×A	*
8706675-C-CAG	8838634-C-CAG						15×AG	*
28478038-T-G	26331891-T-G						23×AG	*
21980001-C-CA	19818115-C-CA						27×A	*
20970352-CA-C	18808466-CA-C			P4_Dst			12×A	*
27761295-G-GA	25615148-G-GA			P1_Y2			15×A	*
16598984-CAA-C	14487104-CAA-C						25×A	*
23025229-C-CA	20863343-C-CA						29×A	*
7149622-CTT-C	7281581-CTT-C						19×T	*
3086544-CAA-C	3218503-CAA-C						18×A	*
8296263-GA-G	8428222-GA-G						17×A	*
5135238-CT-C	5267197-CT-C						26×T	*
13624352-G-GTA	11468676-G-GTA						11×TA	*
14102794-G-GTCTA	11982088-G-GTCTA						11×TCTA	*
15003172-C-CT	12891257-C-CT						10×T	*
17923883-T-G	15812003-T-G	Y45382			Y	Y		*
17678621-C-CT	15566741-C-CT						26×T	*
3146672-AGTGT-A	3278631-AGTGT-A						21×GT	*
16638458-TTG-T	14526578-TTG-T						9×TG	*
21367863-CAT-C	19205977-CAT-C						9×AT	*
13451866-C-CCCATT	11296190-C-CCCATT							*
26379411-CA-C	24233264-CA-C			P1_Y1			22×A	*
9836888-G-T	9999279-G-T		BY186918		Y	Y	20×T	*
15810962-G-T	13699082-G-T		L69 S163 PF2681		Y	Y	19×GT	*
17592345-CTTT-C	15480465-CTTT-C						24×T	*
13451188-C-A	11295512-C-A							*
18738827-GTA-G	16626947-GTA-G						10×TA	*
3279734-T-TAAATAAAC	3411693-T-TAAATAAAC							*
19036703-GT-G	16924823-GT-G						40×T	*
21138364-GAC-G	18976478-GAC-G						10×AC	*
17196756-A-G	15084876-A-G				Y	Y		*
23976848-TTG-T	21830701-TTG-T						8×TG	*
16535053-CT-C	14423173-CT-C						35×T	*
8030030-TA-T	8161989-TA-T						26×A	*
20959438-A-AT	18797552-A-AT			P4_Dst			11×T	*
23484359-T-TTA	21322473-T-TTA						9×TA	*
15548847-GACAC-G	13436967-GACAC-G	15548847GACAC-G					18×AC	*
18434859-CAG-C	16322979-CAG-C			P6_Dst				*
27824063-GT-G	25677916-GT-G			P1_Y2			10×T	*
17459485-CAA-C	15347605-CAA-C						25×A	*
14884698-GA-G	12772764-GA-G						26×A	*
16558177-TTA-T	14446297-TTA-T						11×TA	*
6792019-TA-T	6923978-TA-T						11×A	*
24305272-CAAA-C	22159125-CAAA-C			P3_t1			21×A	*
58977261-T-C	56831114-T-C							*
28679303-TA-T	26533156-TA-T						10×A	*
21687951-AAC-A	19526065-AAC-A						17×AC	*
19206741-TAA-T	17094861-TAA-T						29×A	*
13494555-AT-A	11338879-AT-A						13×T	*
4555316-T-G	4687275-T-G							*
3402899-C-T	3534858-C-T							*
23271732-TA-T	21109846-TA-T						11×A	*
17218300-CT-C	15106420-CT-C						16×T	*	**
58972181-C-T	56826034-C-T							*
2984707-AAT-A	3116666-AAT-A							*
2995229-TTG-T	3127188-TTG-T						8×TG	*
2996639-GAC-G	3128598-GAC-G						10×AC	*
3103284-T-C	3235243-T-C		FT316086						*
3172660-T-C	3304619-T-C							*
3257945-C-G	3389904-C-G							*
3387546-T-A	3519505-T-A							*
3400962-C-G	3532921-C-G		FT317094					*
3402868-G-A	3534827-G-A							*
3402948-C-T	3534907-C-T		FT135514					*
7375259-C-CT	7507218-C-CT						11×T	*
3475308-G-C	3607267-G-C								*
3475494-C-T	3607453-C-T							*
3541033-C-A	3672992-C-A							*
4067369-T-A	4199328-T-A						26×A	*
4327337-G-A	4459296-G-A		FT7421					*
4512176-A-G	4644135-A-G							*
4545124-G-GAC	4677083-G-GAC						12×AC	*
4554737-C-T	4686696-C-T		FTA42700					*
4554780-A-G	4686739-A-G							*
4554832-C-G	4686791-C-G							*
4555159-A-G	4687118-A-G							*
4555206-T-C	4687165-T-C		FT321015					*
4555311-T-C	4687270-T-C		FT321016					*
13451631-A-ATCCAT	11295955-A-ATCCAT						4×TCCAT	*
15490256-TA-T	13378376-TA-T						10×A	*
5882071-AT-A	6014030-AT-A						10×T	*
6597340-TAAAAAA-T	6729299-TAAAAAA-T						28×A	*
19318178-C-CTTT	17206298-C-CTTT						28×T	*
27998485-CA-C	25852338-CA-C			P1_Y2			30×A	*
18290815-CAA-C	16178935-CAA-C			P6_Prx			20×A	*
5563451-CT-C	5695410-CT-C						11×T	*
3403444-T-TAATA	3535403-T-TAATA						10×AATA		*
7535856-A-T	7667815-A-T				Y	Y		*
28592004-A-ATG	26445857-A-ATG						18×TG		*
8535120-CGT-C	8667079-CGT-C						8×GT	*
19202928-C-CA	17091048-C-CA						25×A	*
8154808-C-CT	8286767-C-CT						11×T	*
23505495-C-CAAAA	21343609-C-CAAAA						23×A	*
15491941-G-A	13380061-G-A		FT329633		Y	Y	19×TA	*
4650522-C-T	4782481-C-T							*
16857854-A-AT	14745974-A-AT						11×T	*
26479590-CA-C	24333443-CA-C			P1_Y1			16×A	*
19138349-CTA-C	17026469-CTA-C						11×TA	*
28515523-T-TA	26369376-T-TA						11×A	*
4634602-AAT-A	4766561-AAT-A						9×AT	*
21617605-CAA-C	19455719-CAA-C						23×A	*
20425803-CA-C	18263917-CA-C			P5_Dst			15×A	*
5179515-G-GAT	5311474-G-GAT						13×AT	*
8907673-ATGTG-A	9039632-ATGTG-A						18×TG	*
13940857-A-AAG	11820151-A-AAG						18×AG	*
3889019-C-CT	4020978-C-CT						15×T	*
22577951-G-GA	20416065-G-GA						24×A	*
7107017-A-C	7238976-A-C				Y	Y		*
24637476-TTG-T	22491329-TTG-T			P3_t2			11×TG	*
58983020-A-ACATTCCATTCCACTCCATTC	56836873-A-ACATTCCATTCCACTCCATTC							*
8589494-G-GA	8721453-G-GA						12×A	*
8565786-AT-A	8697745-AT-A						10×T	*
23488834-T-TAAAAAA	21326948-T-TAAAAAA						30×A	*
16904706-T-A	14792826-T-A				Y	Y		*
	10673523-A-T							*
16046631-T-TAC	13934751-T-TAC						17×AC	*
7100954-CTTT-C	7232913-CTTT-C						32×T	*
26414228-C-CA	24268081-C-CA			P1_Y1			12×A	*
5081843-G-GA	5213802-G-GA						10×A	*
8172687-C-CTT	8304646-C-CTT						22×T	*
13489483-C-A	11333807-C-A							*
9398041-GAAA-G	9560432-GAAA-G						15×A	*
7939472-TA-T	8071431-TA-T						35×A	*
27462006-G-T	25315859-G-T			P1_Y2				*
16077543-CAAA-C	13965663-CAAA-C						36×A	*
24472448-A-G	22326301-A-G					Y		*
13896047-AT-A	11775341-AT-A						9×T	*
	56878253-GCA-G						9×CA	*
17843091-A-ATT	15731211-A-ATT						18×T	*
17831207-C-CTT	15719327-C-CTT						17×T	*
2649802-CAA-C,CA	2781761-CAA-C,CA						24×A	*	***
7187998-A-AT	7319957-A-AT						11×T	*
14319448-GATAT-G	12198742-GATAT-G						8×AT	*
8600009-CTT-C	8731968-CTT-C						13×T	*
20084490-C-A	17972610-C-A			P5_Dst				*
6457773-T-TA	6589732-T-TA						15×A	*
15683628-CAA-C	13571748-CAA-C						24×A	*
13965269-CAAA-C	11844563-CAAA-C						21×A	*
23415342-AT-A	21253456-AT-A						21×T	*
19479688-AGTGT-A,AGT	17367808-AGTGT-A,AGT						20×GT	*
14062010-CAAA-C	11941304-CAAA-C						34×A	*
14779486-G-GT	12667556-G-GT						11×T	*
24472454-A-G	22326307-A-G					Y		*
2925592-C-CT	3057551-C-CT						15×T		*
	56841661-C-T							*
28506063-C-CT	26359916-C-CT						11×T	*
15794218-CAA-C	13682338-CAA-C						14×A	*
24472451-C-G	22326304-C-G					Y		*
	56833363-C-CTCCACACCATTCCAT							*
4005957-AT-A	4137916-AT-A						12×T	*
19130738-C-CT	17018858-C-CT						33×T	*
13489492-G-T	11333816-G-T							*
22920605-CTTT-C	20758719-CTTT-C						25×T	*
27971726-C-CAA	25825579-C-CAA			P1_Y2			27×A	*
7280952-CT-C,CTT	7412911-CT-C,CTT						26×T	*
14224265-CT-C	12103559-CT-C						10×T	*
7470700-CAAA-C	7602659-CAAA-C			IR1_L			25×A	*
13448355-CCCCCT-C,CCCTCT	11292679-CCCCCT-C,CCCTCT								*
27617573-G-GA	25471426-G-GA			P1_Y2			14×A	*
21224779-ATTTT-A	19062893-ATTTT-A						19×T	*
28508109-CA-C	26361962-CA-C						11×A	*
15557124-A-AAT	13445244-A-AAT						19×AT	*
17622755-CA-C	15510875-CA-C						11×A	*
28545723-T-A	26399576-T-A							*
	10796157-C-T							*
18462580-TACAC-T,TAC	16350700-TACAC-T,TAC			P6_Dst			20×AC	*
13722703-G-A	11567027-G-A							*
	10673553-A-G							*
18565061-CAAAA-C	16453181-CAAAA-C						27×A	*
3646872-CAA-C	3778831-CAA-C						15×A	*
18984950-CTTTT-C	16873070-CTTTT-C						20×T	*
8666723-GTT-G,GT	8798682-GTT-G,GT						25×T	*
13711993-A-T	11556317-A-T							*
	10686520-C-CCACTCCACTCCATTCCACTCCATTG							*
21123539-T-TA	18961653-T-TA						13×A	*
3638582-A-AT	3770541-A-AT						11×T	*
13489498-G-A	11333822-G-A							*
28517963-CAA-C	26371816-CAA-C						11×A	*
14307953-CAA-C	12187247-CAA-C						15×A	*
8428944-CAAAA-C	8560903-CAAAA-C						25×A	*
17802166-TAA-T	15690286-TAA-T						30×A	*
	10993129-C-A							*
5967927-C-A	6099886-C-A							*
14875592-GTTTT-G	12763662-GTTTT-G						28×T	*
2769237-GA-G	2901196-GA-G						11×A	*
7166641-T-TA	7298600-T-TA							*
	10993130-A-T							*
9403152-A-ATG	9565543-A-ATG						14×TG	*
17482895-G-GA	15371015-G-GA						11×A	*
9416731-G-GTTT	9579122-G-GTTT						23×T	*
	11017494-G-C							*
18297912-C-A	16186032-C-A			P6_Prx				*
	56832753-C-T							*
18928753-G-GA	16816873-G-GA						9×A	*
15593274-CA-C,CAA	13481394-CA-C,CAA						23×A	*
19127667-TAC-T	17015787-TAC-T						18×AC	*
18038962-GA-G	15927082-GA-G						11×A	*
	56861664-C-A							*
17250010-TA-T	15138130-TA-T						13×A	*
8309492-AT-A	8441451-AT-A						10×T	*
	10878239-G-GATTCC							*
4213860-ATG-A	4345819-ATG-A						12×TG	*
	10892169-A-T	PF30	FT191151					*
2752415-TA-T,TAA	2884374-TA-T,TAA						23×A	*
13489462-T-C	11333786-T-C							*
5008883-A-AT	5140842-A-AT						13×T	*	***
14825125-CT-C,CTT	12713192-CT-C,CTT						20×T	*
4847447-T-TA	4979406-T-TA						11×A	*
15497972-ATT-A	13386092-ATT-A						26×T	*
13476897-A-C	11321221-A-C							*
13257481-A-G	11101805-A-G							*
3990664-C-CAA	4122623-C-CAA						18×A	*
5267534-G-T	5399493-G-T							*
	11017495-G-T							*
21623812-GTTT-G	19461926-GTTT-G						25×T	*
22185347-T-TA	20023461-T-TA						13×A	*
	12377234-AT-A							*
16904707-C-A	14792827-C-A				Y	Y		*
8739154-A-AAATAAT	8871113-A-AAATAAT						13×AAT		*
23435181-G-GT,GTT	21273295-G-GT,GTT						20×T	*
	10761260-T-TTTCCA							*
23272285-TTTTCTTTC-T,TTTTC	21110399-TTTTCTTTC-T,TTTTC						16×TTTC	*
13722710-T-A	11567034-T-A							*
	10673535-T-C							*
13268891-C-CT	11113215-C-CT						11×T	*
14465787-G-GT	12345060-G-GT						10×T	*
22115622-A-AT	19953736-A-AT						14×T	*
22437895-A-T	20276009-A-T		BY218449	DYZ19				*
13449095-T-TTCCAC	11293419-T-TTCCAC							*
16336897-GTT-G	14225017-GTT-G						23×T	*
21104606-TGAGA-T	18942720-TGAGA-T						11×GA	*
27967276-G-GTA	25821129-G-GTA			P1_Y2			9×TA	*
8901074-CACATAT-C	9033033-CACATAT-C							*
15411308-CA-C	13299428-CA-C						30×A	*
6043970-CTTTT-C	6175929-CTTTT-C						22×T	*
7110518-A-AT	7242477-A-AT						12×T	*
14986616-T-TTC	12874684-T-TTC						17×TC		*
9833358-GA-G	9995749-GA-G						10×A	*
7107011-CTA-C	7238970-CTA-C						20×TA	*
5125451-AT-A	5257410-AT-A						11×T	*
15495167-C-CA	13383287-C-CA						14×A	*
15358761-GA-G	13246880-GAA-G						26×A	*
22165202-CA-C	20003316-CA-C						28×A	*
	56837026-C-G							*
	56849702-A-G							*
	10673534-A-T							*
2845821-CA-C	2977780-CA-C						28×A	*
9747152-T-G	9909543-T-G							*
7414277-CAAA-C	7546236-CAAA-C						27×A	*
23807578-CAAA-C	21645692-CAAA-C						21×A	*
2733022-A-AT	2864981-A-AT						11×T	*
4790634-G-GA	4922593-G-GA						14×A	*
16969400-C-CT	14857520-C-CT						11×T	*
4425038-AT-A	4556997-AT-A						13×T	*
5066184-CTT-C	5198143-CTT-C						22×T	*
8977029-C-CA	9139420-C-CA						16×A	*
16945883-TAA-T	14834003-TAA-T						15×A	*
4164327-T-TA	4296286-T-TA						11×A	*
8288815-TAA-T	8420774-TAA-T						23×A	*
4539205-CA-C	4671164-CA-C						11×A	*
14681188-C-CA	12569254-C-CA						13×A	*
15421470-C-CA	13309590-C-CA						10×A	*
8396370-C-CA	8528329-C-CA	Y130610					8×A	*
13254022-C-A	11098346-C-A							*
17361058-CAA-C	15249178-CAA-C						25×A	*
13576122-C-CT	11420446-C-CT						14×T	*
7008302-CAAT-C	7140261-CAAT-C						11×AAT	*
17963685-ATT-A	15851805-ATT-A						14×T	*
2950223-G-GTA	3082182-G-GTA						10×TA	*
3963833-CA-C	4095792-CA-C						22×A	*
22468467-T-A	20306581-T-A			DYZ19				*
6027539-AT-A	6159498-AT-A						10×T	*
58972817-GTCCA-G	56826670-GTCCA-G							*
4976787-CA-C	5108746-CA-C						21×A	*
20104256-GGAGA-G	17992376-GGAGA-G			P5_Dst			22×GA	*
22468469-T-G	20306583-T-G			DYZ19				*
21148589-CA-C	18986703-CA-C						30×A	*
	56881325-TA-T						11×A	*
7131386-ACCC-A	7263345-ACCC-A						14×C	*
7033240-C-CA	7165199-C-CA						15×A	*
23046252-TA-T	20884366-TA-T						10×A	*
2892719-AT-A	3024678-AT-A						10×T	*
	10789940-C-T							*
15252842-TA-T	13140928-TA-T						10×A	*
8611886-C-CA	8743845-C-CA						14×A	*
7775119-G-GA	7907078-G-GA						10×A	*
2686435-C-CA	2818394-C-CA						13×A	*
15449885-G-T	13338005-G-T				Y	Y		*
	10673496-G-C							*
3796333-C-CTA	3928292-C-CTA						9×TA	*
20574944-G-GT	18413058-G-GT			P5_Dst			19×T	*
19088523-TA-T	16976643-TA-T						10×A	*
15876360-CAAA-C	13764480-CAAA-C						21×A	*
27971751-AAAC-A	25825604-AAAC-A			P1_Y2				*
4880709-GTT-G	5012668-GTT-G						22×T	*
23476043-G-GT	21314157-G-GT						9×T	*
7165306-G-GTT	7297265-G-GTT						20×T	*
	10673493-A-T							*
10006873-G-GA	10169264-G-GA						11×A	*
18423874-C-A	16311994-C-A			P6_Gap			12×A	*
	10924711-G-T		FT92031					*
3603491-ATTTT-A	3735450-ATTTT-A						24×T	*
	10673502-C-A							*
13845459-G-GA	11724753-G-GA						9×A	*
5989040-A-AT	6120999-A-AT						12×T	*
21556919-C-CT	19395033-C-CT						23×T	*
28542416-CAAA-C	26396269-CAAA-C						17×A	*
17090839-ATTT-A	14978959-ATTT-A						29×T	*
	56849800-T-G							*
16305924-C-CA	14194044-C-CA						24×A	*
18997240-C-CA	16885360-C-CA						11×A	*
	56849801-T-A							*
21104437-TAA-T	18942551-TAA-T						22×A	*
22936288-CTTT-C	20774402-CTTT-C						25×T	*
9847289-ATTTT-A,ATTT	10009680-ATTTT-A,ATTT						28×T	*
4292835-T-TA	4424794-T-TA						13×A	*
	9056794-A-C		FT327763					*
25967636-T-G	23821489-T-G			P1_Y1					**
14168106-A-G	12047400-A-G								**
3588094-GTATATATATATATATATATATA-G	3720053-GTATATATATATATATATATATA-G						24×TA		**
13632903-G-A	11477227-G-A		FT268544						**
26379410-CCA-C	24233263-CCA-C			P1_Y1					**
27583064-C-A	25436917-C-A			P1_Y2					**
26393206-A-C	24247059-A-C			P1_Y1					**
15497972-AT-A	13386092-AT-A						26×T		**
16146467-TA-T	14034587-TA-T			P8_Dst			10×A		**
16868746-CATATATAT-C	14756866-CATATATAT-C						22×AT		**
27583041-C-A	25436894-C-A			P1_Y2					**
7288129-C-T	7420088-C-T								**
	10991236-GTTCCATTCCA-G								**
22268553-C-T	20106667-C-T			DYZ19					**
22517658-T-G	20355772-T-G		FT177458						**
14005951-TAATA-T	11885245-TAATA-T						10×AATA		**
19903780-T-G	17791900-T-G			P5_Prx					**
14832009-A-G	12720076-A-G								**
13595498-C-T	11439822-C-T		FT200144						**
24607229-AGT-A	22461082-AGT-A			P3_t2			10×GT		**
19811327-G-T	17699447-G-T			P5_Prx					**
19412004-AAG-A	17300124-AAG-A								**
3550571-ACT-A	3682530-ACT-A								**
20040482-G-C	17928602-G-C		BY40571	P5_Prx			4×GCAAGCAC		**
23802082-CA-C	21640196-CA-C						24×A		**
13457725-C-A,CTTTC	11302049-C-A,CTTTC								***
13464440-C-A	11308764-C-A								***
	11031716-C-T								***
28799725-T-A	26653578-T-A								***
13258102-T-C	11102426-T-C								***
13253148-G-A	11097472-G-A								***
22147864-C-CT	19985978-C-CT						12×T		***
21746730-C-T	19584844-C-T								***
	10949782-C-A								***
8314169-TTG-G,T	8446128-TTG-G,T								***
13566991-ATTT-A	11411315-ATTT-A						17×T		***
13448686-T-C	11293010-T-C								***
13258109-A-G	11102433-A-G								***
	11014478-A-G								***
5434020-G-GT	5565979-G-GT						13×T		***
19394245-AT-A	17282365-AT-A						11×T		***
5962109-C-CAT	6094068-C-CAT						20×AT		***
14914672-C-CTT	12802739-C-CTT						17×T		***
	10802375-T-TCATTC								***
8058452-CTTT-C	8190411-CTTT-C						15×T		***
4832773-C-CT	4964732-C-CT						14×T		***
13535639-GTA-G	11379963-GTA-G						21×TA		***
13480414-G-C	11324738-G-C								***
22298335-T-C	20136449-T-C			DYZ19					***
15230842-CTT-C	13118928-CTT-C						13×T		***
15324319-CTT-C,CT	13212437-CTT-C,CT						25×T		***
	10987246-T-C								***
3389049-T-TA	3521008-T-TA						10×A		***
13825471-T-A	11704765-T-A								***
13452240-A-T	11296564-A-T								***
7100954-CT-C	7232913-CT-C						32×T		***
23415341-TA-T	21253455-TA-T								***
22715144-TAA-T	20553258-TAA-T						23×A		***
21575566-G-A	19413680-G-A								***
4067369-TA-T	4199328-TA-T						26×A		***
3908945-C-CA	4040904-C-CA						15×A		***
22540538-GTATATA-G	20378652-GTATATA-G						17×TA		***
13452226-TCCACT-T,TCCACA	11296550-TCCACT-T,TCCACA								***
14825824-C-CT	12713891-C-CT						18×T		***
4377969-CTTT-C,CT	4509928-CTTT-C,CT						19×T		***
21575565-T-C	19413679-T-C								***
5932017-G-A	6063976-G-A								***
13825470-C-A	11704764-C-A								***
	10671833-A-G								***
17030757-ATT-A	14918877-ATT-A						24×T		***
6457484-C-CT	6589443-C-CT						17×T		***
13448344-A-G	11292668-A-G								***
	11021346-CCTCTCTACTG-C								***
28700731-CTATA-C	26554584-CTATA-C						17×TA		***
21054379-CAA-C	18892493-CAA-C						18×A		***
15164608-AATAT-A	13052694-AATAT-A						12×AT		***
13447314-T-TTCCAC	11291638-T-TTCCAC						8×TCCAC		***
13470007-G-A	11314331-G-A								***
21575553-C-T	19413667-C-T								***
59004640-G-C	56858493-G-C								***
5540254-C-CGT	5672213-C-CGT						10×GT		***
5354713-CAT-C	5486672-CAT-C						16×AT		***
	10949789-T-A								***
2688622-A-ATTT	2820581-A-ATTT						29×T		***
2741101-CTTT-C	2873060-CTTT-C						19×T		***
	56855237-A-ATTTT								***
13448640-ATTCCATTCCATTCCATTCCATTC-A,ATTCCATTCCATTCCAATCCATTC	11292964-ATTCCATTCCATTCCATTCCATTC-A,ATTCCATTCCATTCCAATCCATTC								***
13476572-T-C	11320896-T-C								***
3103334-A-G	3235293-A-G								***
3253200-G-A	3385159-G-A								***
3253205-C-T	3385164-C-T								***
3427048-G-T	3559007-G-T		FT317184						***
13478283-C-T	11322607-C-T								***
24415718-TTATATATA-T	22269571-TTATATATA-T						31×TA		***
	10671811-G-C								***
	10985116-T-C								***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

	All	McDonald	YFull
Kit: 908809	15249851	9595057	8403651
Kit: 908809	15515753	9551295	8399914
Used in age calculations	15515753	9595057	8403651
Counts of SNPs		98	72

Variant counts last updated 2022-07-13 03:00:41.

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Unique Mutations

Age Analysis Information (work in progress)