Freel
Kane-BY3: 942448, BigY3: 942448MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | Kane-BY3 942448 | BigY3 942448 |
---|---|---|---|---|---|---|---|---|---|
28800246-G-T | 26654099-G-T | A* | |||||||
19962246-G-A | 17850366-G-A | P5_Prx | A* | ||||||
24302177-C-T | 22156030-C-T | P3_t1 | A* | ||||||
22435760-A-T | 20273874-A-T | DYZ19 | + | ||||||
22260997-C-T | 20099111-C-T | DYZ19 | + | ||||||
59013629-T-A | 56867482-T-A | + | |||||||
15271047-G-GAAA | 13159136-G-GAAA | 19×A | + | ||||||
58872680-C-G | 56718191-G-C | + | |||||||
58872705-A-T | 56718166-T-A | + | |||||||
17200065-G-T | 15088185-G-T | Y | Y | + | |||||
11014432-A-AATTCC | + | ||||||||
21623812-G-GTTT | 19461926-G-GTTT | 25×T | + | ||||||
20104256-GGAGAGA-G | 17992376-GGAGAGA-G | P5_Dst | 22×GA | + | |||||
13733857-A-C | 11578181-A-C | + | |||||||
19696433-TA-T | 17584553-TA-T | P5_Prx | 14×A | + | |||||
22229381-GA-G | 20067495-GA-G | DYZ19 | + | ||||||
22229384-CCTCCCAGAAGGAAGAAACTCTAGACACATTTGATGGAACAAACTCTGGACATAAAACCTTTAAGTGCTGTAACGCTCACCACTAAGGTCTGCGGCTTCATTCTTGAAGAGAACAAGACCATGAA-C | 20067498-CCTCCCAGAAGGAAGAAACTCTAGACACATTTGATGGAACAAACTCTGGACATAAAACCTTTAAGTGCTGTAACGCTCACCACTAAGGTCTGCGGCTTCATTCTTGAAGAGAACAAGACCATGAA-C | DYZ19 | + | ||||||
3359916-C-A | 3491875-C-A | FTA21824 | + | + | |||||
4583034-T-C | 4714993-T-C | + | ** | ||||||
5370917-C-T | 5502876-C-T | FT49268 | + | + | |||||
5748304-A-C | 5880263-A-C | FT49372 | + | + | |||||
5911040-A-T | 6042999-A-T | 9×T | + | + | |||||
6441199-G-C | 6573158-G-C | FTA22027 | + | + | |||||
7704030-G-A | 7835989-G-A | FT49720 | Y | Y | + | + | |||
8016393-T-G | 8148352-T-G | FT49759 | Y | Y | + | + | |||
10752434-C-T | FT429659 | + | ** | ||||||
10803569-T-C | FT431904 | + | + | ||||||
14357411-G-A | 12236706-G-A | FT50175 | Y | Y | + | + | |||
15081016-G-T | 12969106-G-T | Y | + | ** | |||||
15107254-T-C | 12995341-T-C | FT138690 | Y | Y | + | + | |||
17927434-A-G | 15815554-A-G | FT50868 | Y | Y | + | + | |||
19472566-C-T | 17360686-C-T | Y | Y | * | + | ||||
13376-T-A | + | ||||||||
22261017-TTTACGGTGAGTGTTACAGCACTTAAAAGTGTTATGTCCAGAGCTTTTTTCCTTCAGATGTGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGCTCACTTCAAAAATGAAACTGCAGACGA-T | 20099131-TTTACGGTGAGTGTTACAGCACTTAAAAGTGTTATGTCCAGAGCTTTTTTCCTTCAGATGTGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGTCTTGCTCACTTCAAAAATGAAACTGCAGACGA-T | DYZ19 | + | ||||||
11028340-T-TTCACCATTCCATTGCATTCCATTCCATCCAATTCTATTCCACTCTATTTCA | + | ||||||||
13633415-G-A | 11477739-G-A | + | |||||||
17074637-G-GTTTTTTT | 14962757-G-GTTTTTTT | 34×T | + | ||||||
17278306-GAAAGAA-G | 15166426-GAAAGAA-G | + | |||||||
21829225-T-C | 19667339-T-C | Y | + | ||||||
22458033-TGTGTCCAGAGTTTCCTCCTTCTGGCAGGTTCATGGTCGTGCTC-T | 20296147-TGTGTCCAGAGTTTCCTCCTTCTGGCAGGTTCATGGTCGTGCTC-T | DYZ19 | + | ||||||
22458078-CTTCAAGAATGAAGCTGCAGACCTTAGTGGTGAACGTTACAGCACTTAAGTTTTTAT-C | 20296192-CTTCAAGAATGAAGCTGCAGACCTTAGTGGTGAACGTTACAGCACTTAAGTTTTTAT-C | DYZ19 | + | ||||||
23695834-T-TGCCCCCCC | 21533948-T-TGCCCCCCC | + | |||||||
24185420-C-G | 22039273-C-G | P3_b1 | + | ||||||
26658507-C-G | 24512360-C-G | P1_g2 | + | ||||||
9296364-T-C | 9458755-T-C | Y | * | ||||||
15667208-C-G | 13555328-C-G | YSC0000179 FGC1168 SK2006 | Y | * | |||||
13467219-AC-A | 11311543-AC-A | * | |||||||
58883943-T-C | 56706928-A-G | * | |||||||
22475030-G-T | 20313144-G-T | BY223268 | DYZ19 | * | |||||
28536045-TAC-T | 26389898-TAC-T | * | |||||||
7508355-TTTCC-T | 7640314-TTTCC-T | L1403 | 13×TTCC | * | |||||
13688181-A-AGAATGGAATGGAATGGAATG | 11532505-A-AGAATGGAATGGAATGGAATG | 8×GAATG | * | ||||||
13718009-G-C | 11562333-G-C | * | |||||||
9967520-T-C | 10129911-T-C | Y | * | ||||||
58981059-G-T | 56834912-G-T | * | |||||||
22440108-A-G | 20278222-A-G | FGC66774 | DYZ19 | * | |||||
13464964-C-T | 11309288-C-T | * | |||||||
22359444-C-A | 20197558-C-A | DYZ19 | * | ||||||
13474767-C-A | 11319091-C-A | * | |||||||
13475767-A-T | 11320091-A-T | * | |||||||
24535250-T-C | 22389103-T-C | P3_t2 | * | ||||||
26538252-C-CA | 24392105-C-CA | P1_g2 | 17×A | * | |||||
13745150-G-T | 11589474-G-T | * | |||||||
28716998-C-A | 26570851-C-A | CTS12831 | * | ||||||
28717005-G-A | 26570858-G-A | CTS12832 | * | ||||||
3280099-A-G | 3412058-A-G | * | |||||||
27087610-GCCTTCCTTCCTT-G | 24941463-GCCTTCCTTCCTT-G | P1_r4 | 15×CCTT | * | |||||
13526375-T-G | 11370699-T-G | * | |||||||
13526424-C-T | 11370748-C-T | * | |||||||
13728623-T-A | 11572947-T-A | * | |||||||
13309070-T-C | 11153394-T-C | * | |||||||
13720226-T-A | 11564550-T-A | * | |||||||
22297974-C-A | 20136088-C-A | A4061 | DYZ19 | * | |||||
24929439-TACAC-T | 22783292-TACAC-T | g1 | 14×AC | * | |||||
18871951-AT-A | 16760071-AT-A | 8×T | * | ||||||
7428231-A-C | 7560190-A-C | Y | Y | * | |||||
13465494-T-G | 11309818-T-G | * | |||||||
13595418-T-G | 11439742-T-G | * | |||||||
13434946-C-A | 11279270-C-A | * | |||||||
13434927-A-C | 11279251-A-C | * | |||||||
13475930-T-A | 11320254-T-A | * | |||||||
22509039-G-T | 20347153-G-T | BY3989 | BY196744 | DYZ19 | * | ||||
3266087-C-T | 3398046-C-T | * | |||||||
3377786-T-A | 3509745-T-A | * | |||||||
3434288-CT-C | 3566247-CT-C | * | |||||||
3487032-C-T | 3618991-C-T | * | |||||||
5344897-A-G | 5476856-A-G | * | |||||||
5824050-GGA-G | 5956009-GGA-G | 10×GA | * | ||||||
6503431-T-A | 6635390-T-A | * | |||||||
8742765-AATG-A | 8874724-AATG-A | 8×ATG | * | ||||||
9957060-A-G | 10119451-A-G | Y | * | ||||||
10055473-T-A | 10217864-T-A | * | |||||||
13194529-T-C | 11038853-T-C | * | |||||||
13256166-C-T | 11100490-C-T | * | |||||||
13272409-AC-A | 11116733-AC-A | * | |||||||
13303074-A-G | 11147398-A-G | * | |||||||
13306660-G-A | 11150984-G-A | * | |||||||
13306702-C-T | 11151026-C-T | * | |||||||
13306980-A-C | 11151304-A-C | * | |||||||
13306982-G-T | 11151306-G-T | * | |||||||
13307063-C-A | 11151387-C-A | * | |||||||
13346088-A-G | 11190412-A-G | 8×AG | * | ||||||
13400069-C-T | 11244393-C-T | * | |||||||
13438425-T-G | 11282749-T-G | * | |||||||
13443341-A-G | 11287665-A-G | * | |||||||
13454842-TATTCC-T | 11299166-TATTCC-T | 7×ATTCC | * | ||||||
13640909-G-T | 11485233-G-T | * | |||||||
13718274-C-G | 11562598-C-G | * | |||||||
13718624-C-T | 11562948-C-T | * | |||||||
17007110-GCA-G | 14895230-GCA-G | * | |||||||
17332772-ATCG-A | 15220892-ATCG-A | * | |||||||
19073940-TAC-T | 16962060-TAC-T | * | |||||||
22050672-CT-C | 19888786-CT-C | 9×T | * | ||||||
22552145-T-TA | 20390259-T-TA | Y145554 | 9×A | * | |||||
59017782-T-A | 56871635-T-A | * | |||||||
13530684-A-T | 11375008-A-T | * | |||||||
3980895-G-GA | 4112854-G-GA | 9×A | * | ||||||
22475014-T-G | 20313128-T-G | DYZ19 | * | ||||||
22475023-C-A | 20313137-C-A | DYZ19 | * | ||||||
6934730-G-T | 7066689-G-T | Y | Y | * | |||||
7282159-C-CTT | 7414118-C-CTT | 22×T | * | ||||||
7325111-TTA-T | 7457070-TTA-T | * | |||||||
9341165-A-G | 9503556-A-G | Y | * | ||||||
9957065-A-T | 10119456-A-T | Y | * | ||||||
10022163-G-A | 10184554-G-A | Y | * | ||||||
13254537-A-T | 11098861-A-T | * | |||||||
13257389-G-A | 11101713-G-A | * | |||||||
13261212-C-T | 11105536-C-T | * | |||||||
13263674-G-A | 11107998-G-A | * | |||||||
13293525-A-T | 11137849-A-T | * | |||||||
13293529-T-A | 11137853-T-A | * | |||||||
13306707-ACT-A | 11151031-ACT-A | * | |||||||
13399159-G-A | 11243483-G-A | * | |||||||
13404362-C-T | 11248686-C-T | * | |||||||
13711849-G-A | 11556173-G-A | * | |||||||
13711882-G-A | 11556206-G-A | * | |||||||
13711891-A-G | 11556215-A-G | * | |||||||
13718316-GAATGGAATGGAATGA-G | 11562640-GAATGGAATGGAATGA-G | * | |||||||
13718471-G-C | 11562795-G-C | * | |||||||
13718736-T-C | 11563060-T-C | * | |||||||
13722664-A-C | 11566988-A-C | * | |||||||
14004508-GCA-G | 11883802-GCA-G | 9×CA | * | ||||||
22475053-T-G | 20313167-T-G | Z23635 | DYZ19 | * | |||||
22512135-A-T | 20350249-A-T | DYZ19 | * | ||||||
59009727-C-T | 56863580-C-T | * | |||||||
59011040-T-C | 56864893-T-C | * | |||||||
59011897-C-A | 56865750-C-A | * | |||||||
59015192-G-T | 56869045-G-T | * | |||||||
59017911-A-C | 56871764-A-C | * | |||||||
59018408-T-A | 56872261-T-A | * | |||||||
59022252-A-G | 56876105-A-G | * | |||||||
7103038-TACAC-T | 7234997-TACAC-T | 17×AC | * | ||||||
28146580-AT-A | 26000433-AT-A | P1_b4 | 10×T | * | |||||
13263785-A-G | 11108109-A-G | * | |||||||
28812970-T-C | 26666823-T-C | * | |||||||
13489374-C-T | 11333698-C-T | * | |||||||
19103880-G-GTT | 16992000-G-GTT | Y19534 | 13×T | * | |||||
22259538-A-T | 20097652-A-T | DYZ19 | * | ||||||
22422578-CT-C | 20260692-CT-C | DYZ19 | * | ||||||
22448747-G-C | 20286861-G-C | DYZ19 | * | ||||||
13711284-G-A | 11555608-G-A | * | |||||||
22474930-T-G | 20313044-T-G | FGC12059 | Z3484 | DYZ19 | * | ||||
22287097-G-T | 20125211-G-T | DYZ19 | * | ||||||
9963288-T-A | 10125679-T-A | Y | * | ||||||
8407743-G-GC | 8539702-G-GC | 9×C | * | ||||||
13717982-G-T | 11562306-G-T | * | |||||||
13718005-G-A | 11562329-G-A | * | |||||||
22238311-C-A | 20076425-C-A | DYZ19 | * | ||||||
26834853-A-AAAGG,G | 24688706-A-AAAGG,G | P1_g2 | 11×AAGG | * | |||||
13942606-TAC-T | 11821900-TAC-T | 9×AC | * | ||||||
21397822-TA-T | 19235936-TA-T | 9×A | * | ||||||
3952340-TGAGAGA-T | 4084299-TGAGAGA-T | 20×GA | * | ||||||
3154138-T-G | 3286097-T-G | * | |||||||
59016948-G-T | 56870801-G-T | * | |||||||
13453880-T-C | 11298204-T-C | * | |||||||
22359391-C-T | 20197505-C-T | DYZ19 | * | ||||||
22359421-A-G | 20197535-A-G | DYZ19 | * | ||||||
22359436-C-T | 20197550-C-T | DYZ19 | * | ||||||
22359469-G-C | 20197583-G-C | BY50560 | DYZ19 | * | |||||
59007971-A-C | 56861824-A-C | * | |||||||
58884082-C-T | 56706789-G-A | * | |||||||
13595434-T-C | 11439758-T-C | * | |||||||
13595444-C-T | 11439768-C-T | * | |||||||
13611525-A-G | 11455849-A-G | * | |||||||
13711545-A-G | 11555869-A-G | * | |||||||
13485761-A-T | 11330085-A-T | * | |||||||
13737096-T-G | 11581420-T-G | * | |||||||
13478216-G-A | 11322540-G-A | A15570 | * | ||||||
13474492-C-A | 11318816-C-A | * | |||||||
13489368-C-A | 11333692-C-A | * | |||||||
13489634-C-T | 11333958-C-T | * | |||||||
13487819-C-T | 11332143-C-T | * | |||||||
25624529-G-GT | 23478382-G-GT | P1_b3 | 12×T | * | |||||
58827464-C-A | 56763407-G-T | * | |||||||
25246320-CCTT-C | 23100173-CCTT-C | P2_r1 | * | ||||||
22233154-T-C | 20071268-T-C | DYZ19 | * | ||||||
13465389-C-G | 11309713-C-G | * | |||||||
2702927-TA-T | 2834886-TA-T | 9×A | * | ||||||
58836846-C-G | 56754025-G-C | * | |||||||
58883557-C-A | 56707314-G-T | * | |||||||
13718399-T-G | 11562723-T-G | * | |||||||
24108403-GT-G | 21962256-GT-G | P3_b1 | 12×T | * | |||||
9418243-TTGTGTG-T | 9580634-TTGTGTG-T | 17×TG | * | ||||||
13474529-G-A | 11318853-G-A | * | |||||||
22422590-A-G | 20260704-A-G | DYZ19 | * | ||||||
13734061-C-G | 11578385-C-G | * | |||||||
22508367-C-A | 20346481-C-A | DYZ19 | * | ||||||
22508397-A-C | 20346511-A-C | DYZ19 | * | ||||||
14898435-C-CTTT | 12786501-C-CTT | 15×T | * | ||||||
8703659-AT-A,ATT | 8835618-AT-A,ATT | 18×T | * | ||||||
11001448-A-G | * | ||||||||
4292835-TAA-T | 4424794-TAA-T | 13×A | * | ||||||
14910798-AT-A,ATT | 12798865-AT-A,ATT | 21×T | * | ||||||
14490989-C-T | 12370258-C-T | FT50209 | Y | Y | * | ||||
22800905-A-AT | 20639019-A-AT | 9×T | * | ||||||
21464771-GTTCTTC-G,GTTC | 19302885-GTTCTTC-G,GTTC | 16×TTC | * | ||||||
14825721-T-. | 12713788-G-T | * | |||||||
5155953-TAA-T | 5287912-TAA-T | 13×A | * | *** | |||||
56832512-C-A | * | ||||||||
6250518-TCA-T | 6382477-TCA-T | IR3_Dst | 8×CA | * | |||||
13467266-C-A | 11311590-C-A | * | |||||||
10774516-A-G | Y125021 | * | |||||||
13462180-C-A | 11306504-C-A | * | |||||||
21295234-CT-C,CTT | 19133348-CT-C,CTT | 17×T | * | ||||||
18718886-ATATCTATC-A,ATATC | 16607006-ATATCTATC-A,ATATC | 13×TATC | * | ||||||
56850416-A-T | * | ||||||||
10904081-A-T | * | ||||||||
13489681-C-A | 11334005-C-A | * | |||||||
11001546-T-C | * | ||||||||
10908361-G-C | * | ||||||||
10908375-G-A | * | ||||||||
10908390-C-T | * | ||||||||
10908391-A-G | * | ||||||||
4658822-G-GA | 4790781-G-GA | 9×A | * | ||||||
13475387-C-A | 11319711-C-A | * | |||||||
10895870-C-G | * | ||||||||
17201762-C-CTT | 15089882-C-CTT | 16×T | * | ||||||
6889300-CT-C | 7021259-CT-C | 9×T | * | ||||||
8154164-G-T | 8286123-G-T | Y | Y | * | |||||
56842312-G-A | * | ||||||||
13718744-T-A | 11563068-T-A | * | |||||||
13473822-C-A | 11318146-C-A | * | |||||||
13462277-C-A | 11306601-C-A | * | |||||||
11001432-C-A | * | ||||||||
56842387-CTG-C | * | ||||||||
10908322-C-A | * | ||||||||
18934769-GT-G | 16822889-GT-G | 10×T | * | ||||||
10660086-C-T | * | ||||||||
3296888-A-ACT | 3428847-A-ACT | 12×CT | * | ||||||
14557662-T-C | 12445863-T-C | FT99314 | Y | * | |||||
15980721-TAAA-T | 13868841-TAAA-T | 17×A | * | ||||||
13478364-G-A | 11322688-G-A | * | |||||||
22555369-G-GT | 20393483-G-GT | 9×T | * | ||||||
13930635-CT-C | 11809929-CT-C | 9×T | * | ||||||
9127055-G-GA | 9289446-G-GA | 10×A | * | ||||||
13489821-G-T | 11334145-G-T | * | |||||||
8498731-A-AT | 8630690-A-AT | 10×T | * | ||||||
17117423-AT-A | 15005543-AT-A | 9×T | * | ||||||
8154151-G-T | 8286110-G-T | Y | Y | * | |||||
14557626-G-A | 12445827-G-A | Y | * | ||||||
8377909-TACACAC-T | 8509868-TACACAC-T | 16×AC | * | ||||||
13461124-G-T | 11305448-G-T | * | |||||||
13474736-G-C | 11319060-G-C | * | |||||||
5728147-GA-G | 5860106-GA-G | 9×A | * | ||||||
56835935-A-C | * | ||||||||
56855640-G-A | * | ||||||||
5031253-GA-G | 5163212-GA-G | 10×A | * | ||||||
6521551-GTTT-G | 6653510-GTTT-G | 17×T | * | ||||||
17256854-C-CTT | 15144974-C-CTT | 14×T | * | ||||||
7474374-AAGAGAG-A,AAG | 7606333-AAGAGAG-A,AAG | IR1_L | 21×AG | * | |||||
13473793-C-G | 11318117-C-G | * | |||||||
13502674-C-A | 11346998-C-A | * | |||||||
13472106-C-G | 11316430-C-G | * | |||||||
13475404-G-T | 11319728-G-T | * | |||||||
6517443-C-CT | 6649402-C-CT | 10×T | * | ||||||
13483363-AT-A | 11327687-AT-A | * | |||||||
10082024-A-T | 10244415-A-T | * | |||||||
10082045-T-A | 10244436-T-A | * | |||||||
10082062-G-C | 10244453-G-C | * | |||||||
10986878-A-T | * | ||||||||
3293062-T-A | 3425021-T-A | * | |||||||
6403274-C-T | 6535233-C-T | * | |||||||
13708065-T-C | 11552389-T-C | * | |||||||
13708069-A-T | 11552393-A-T | * | |||||||
13708082-G-A | 11552406-G-A | * | |||||||
22505732-T-G | 20343846-T-G | DYZ19 | * | ||||||
10976180-G-A | * | ||||||||
15400167-CAAAA-C | 13288287-CAAAA-C | 14×A | * | ||||||
13718407-A-G | 11562731-A-G | * | |||||||
13718409-T-G | 11562733-T-G | * | |||||||
22509555-A-T | 20347669-A-T | DYZ19 | * | ||||||
28790600-G-A | 26644453-G-A | * | |||||||
13474787-C-A | 11319111-C-A | * | |||||||
3768648-G-GT | 3900607-G-GT | 10×T | * | ||||||
13458694-T-A | 11303018-T-A | * | |||||||
28803182-G-T | 26657035-G-T | * | |||||||
13689325-C-T | 11533649-C-T | * | |||||||
28813787-T-G | 26667640-T-G | BY152177 | * | ||||||
5728934-T-TAG | 5860893-T-TAG | * | |||||||
13214292-T-C | 11058616-T-C | * | |||||||
13483391-C-T | 11327715-C-T | * | |||||||
13637178-T-C | 11481502-T-C | * | |||||||
13637182-G-T | 11481506-G-T | * | |||||||
10884974-TTCCACTTCACTGCAC-T | * | ||||||||
13469970-G-C | 11314294-G-C | * | |||||||
13489347-C-G | 11333671-C-G | * | |||||||
13483150-G-A | 11327474-G-A | * | |||||||
15677505-CA-C,CAA | 13565625-CA-C,CAA | 16×A | * | ||||||
13464986-C-T | 11309310-C-T | * | |||||||
13484226-A-G | 11328550-A-G | * | |||||||
56828901-ATCCATTCCATTCCATTCCATGTCATTCCAT-A | 4×TCCAT | * | |||||||
13489729-CTGG-C | 11334053-CTGG-C | * | |||||||
21189668-CA-C,CAA | 19027782-CA-C,CAA | 23×A | * | ||||||
14490984-G-A | 12370253-G-A | Y | Y | * | |||||
17925209-AT-A | 15813329-AT-A | 9×T | * | ||||||
10922135-C-T | * | ||||||||
10899391-CTCCAT-C | * | ||||||||
4799565-A-C | 4931524-A-C | FGC47851 | * | ||||||
58883772-C-G | 56707099-G-C | * | |||||||
59012367-T-C | 56866220-T-C | * | |||||||
17170167-CT-C,CTT | 15058287-CT-C,CTT | 21×T | * | ||||||
17861949-CT-C | 15750069-CT-C | 10×T | * | ||||||
11001437-T-TTGC | * | ||||||||
4981838-G-GGT | 5113797-G-GGT | 14×GT | * | ||||||
8571150-CA-C,CAA | 8703109-CA-C,CAA | 14×A | * | ||||||
13711469-G-T | 11555793-G-T | * | |||||||
13711486-A-G | 11555810-A-G | * | |||||||
13489678-C-A | 11334002-C-A | * | |||||||
13478362-G-A | 11322686-G-A | * | |||||||
5786590-C-A | 5918549-C-A | * | |||||||
13472124-T-A | 11316448-T-A | * | |||||||
10846955-C-T | * | ||||||||
56850408-C-A | * | ||||||||
13489757-C-A | 11334081-C-A | * | |||||||
6440192-CT-C | 6572151-CT-C | 8×T | * | ||||||
13460483-T-A | 11304807-T-A | * | |||||||
13693639-C-T | 11537963-C-T | * | |||||||
13484951-G-T | 11329275-G-T | * | |||||||
13470474-G-C | 11314798-G-C | * | |||||||
13489303-G-C | 11333627-G-C | * | |||||||
8428944-CAAA-C,CAA | 8560903-CAAA-C,CAA | 25×A | * | ||||||
13462256-C-G | 11306580-C-G | * | |||||||
10013883-G-A | 10176274-G-A | Y | * | ||||||
13467262-T-A | 11311586-T-A | * | |||||||
13525718-G-A | 11370042-G-A | * | |||||||
13470527-G-C | 11314851-G-C | * | |||||||
6858592-CT-C,CTT | 6990551-CT-C,CTT | 25×T | * | ||||||
13489895-G-C | 11334219-G-C | * | |||||||
13293852-C-T | 11138176-C-T | * | |||||||
13314944-G-C | 11159268-G-C | * | |||||||
13342223-G-C | 11186547-G-C | * | |||||||
13489579-T-C | 11333903-T-C | * | |||||||
58883892-C-G | 56706979-G-C | * | |||||||
13462016-C-G | 11306340-C-G | * | |||||||
13465409-C-T | 11309733-C-T | * | |||||||
56839431-G-A | * | ||||||||
14670834-A-AT | 12558900-A-AT | 10×T | * | ||||||
13472034-C-T | 11316358-C-T | * | |||||||
13598951-A-AATG | 11443275-A-AATG | * | |||||||
28797893-C-CAAT | 26651746-C-CAAT | * | |||||||
13722871-T-A | 11567195-T-A | * | |||||||
13483360-A-T | 11327684-A-T | * | |||||||
13476539-A-T | 11320863-A-T | * | |||||||
7275188-TAA-T,TA | 7407147-TAA-T,TA | 20×A | * | ||||||
5643449-TAA-T | 5775408-TAA-T | 12×A | * | ||||||
3755401-A-T | 3887360-A-T | FTB50023 | 14×T | * | |||||
17109091-AACAC-A,AAC | 14997211-AACAC-A,AAC | 25×AC | * | ||||||
9975275-G-A | 10137666-G-A | Y | * | ||||||
9975285-C-T | 10137676-C-T | Y | * | ||||||
13374406-C-T | 11218730-C-T | * | |||||||
13385226-C-T | 11229550-C-T | * | |||||||
13405203-A-G | 11249527-A-G | * | |||||||
13405218-G-A | 11249542-G-A | * | |||||||
13467296-T-A | 11311620-T-A | * | |||||||
13474343-C-G | 11318667-C-G | * | |||||||
13498780-A-G | 11343104-A-G | * | |||||||
13498786-C-G | 11343110-C-G | * | |||||||
13514540-G-C | 11358864-G-C | * | |||||||
13539680-G-A | 11384004-G-A | * | |||||||
13539690-G-C | 11384014-G-C | * | |||||||
13539707-T-C | 11384031-T-C | * | |||||||
13541676-A-T | 11386000-A-T | * | |||||||
13563786-G-T | 11408110-G-T | * | |||||||
13693628-G-A | 11537952-G-A | BY211054 | * | ||||||
9936201-T-A | 10098592-T-A | Y | * | ||||||
10908302-G-A | * | ||||||||
13375827-T-A | 11220151-T-A | * | |||||||
13475825-C-A | 11320149-C-A | * | |||||||
13514284-G-T | 11358608-G-T | * | |||||||
13514547-C-T | 11358871-C-T | * | |||||||
13519254-G-T | 11363578-G-T | * | |||||||
13528269-T-C | 11372593-T-C | * | |||||||
13530702-G-T | 11375026-G-T | * | |||||||
13586770-C-T | 11431094-C-T | * | |||||||
13598501-A-G | 11442825-A-G | * | |||||||
13598511-C-G | 11442835-C-G | * | |||||||
13693629-G-C | 11537953-G-C | * | |||||||
22458184-T-G | 20296298-T-G | DYZ19 | * | ** | |||||
28584356-T-G | 26438209-T-G | * | |||||||
28809769-G-T | 26663622-G-T | * | |||||||
56856588-C-T | * | ||||||||
56863749-G-A | * | ||||||||
13490777-TAAAAG-T | 11335101-TAAAAG-T | * | |||||||
13694839-C-A | 11539163-C-A | * | |||||||
28809753-T-C | 26663606-T-C | * | |||||||
13531769-AAAAAAAAC-A | 11376093-AAAAAAAAC-A | * | |||||||
13489289-G-T | 11333613-G-T | * | |||||||
13549902-GTGTGTC-G | 11394226-GTGTGTC-G | * | |||||||
3200263-CTGTGTG-C,CTGTG | 3332222-CTGTGTG-C,CTGTG | 15×TG | * | ||||||
4120195-AACACAC-A | 4252154-AACACAC-A | 21×AC | * | ||||||
5885123-TA-T,TAA | 6017082-TA-T,TAA | 17×A | * | ||||||
13523622-C-CAA | 11367946-C-CAA | * | |||||||
9994716-T-A | 10157107-T-A | Y | * | ||||||
10802080-C-G | * | ||||||||
10802091-C-A | * | ||||||||
13524174-G-A | 11368498-G-A | * | |||||||
13590730-C-T | 11435054-C-T | * | |||||||
13590731-A-G | 11435055-A-G | * | |||||||
13488052-T-A | 11332376-T-A | * | |||||||
6089764-GTT-G,GT | 6221723-GTT-G,GT | 31×T | * | ||||||
13476532-C-G | 11320856-C-G | * | |||||||
13476557-A-G | 11320881-A-G | * | |||||||
13476576-G-T | 11320900-G-T | * | |||||||
13476600-G-T | 11320924-G-T | * | |||||||
13476604-A-G | 11320928-A-G | * | |||||||
13476617-G-T | 11320941-G-T | * | |||||||
8448119-AT-A | 8580078-AT-A | 10×T | * | ||||||
13478479-C-T | 11322803-C-T | * | |||||||
12489022-TACAC-T,TAC | 16×AC | * | |||||||
13438462-A-C | 11282786-A-C | * | |||||||
16447158-AACACACAC-A,AAC | 14335278-AACACACAC-A,AAC | 22×AC | * | ||||||
9942758-G-C | 10105149-G-C | Y | * | ||||||
13399514-A-AT | 11243838-A-AT | 10×T | * | ||||||
13603629-A-AT | 11447953-A-AT | 15×T | * | ||||||
13481034-T-A | 11325358-T-A | * | |||||||
13296447-A-C | 11140771-A-C | * | |||||||
13319654-G-A | 11163978-G-A | * | |||||||
13502628-AC-A | 11346952-AC-A | * | |||||||
13539438-A-G | 11383762-A-G | * | |||||||
9943642-G-T | 10106033-G-T | Y | * | ||||||
13528494-A-G | 11372818-A-G | * | |||||||
13638451-A-G | 11482775-A-G | * | |||||||
22479516-T-C | 20317630-T-C | DYZ19 | * | ||||||
22298381-G-C | 20136495-G-C | FT455407 | DYZ19 | * | |||||
21535757-A-T | 19373871-A-T | Y | * | ||||||
13590531-GT-G | 11434855-GT-G | * | |||||||
13465463-C-A | 11309787-C-A | * | |||||||
13569638-C-G | 11413962-C-G | * | |||||||
13479062-C-A | 11323386-C-A | * | *** | ||||||
13489383-CG-C | 11333707-CG-C | * | |||||||
22438744-C-G | 20276858-C-G | DYZ19 | * | ||||||
21689937-G-GT | 19528051-G-GT | 9×T | * | ||||||
13479211-G-A | 11323535-G-A | * | |||||||
13479222-G-C | 11323546-G-C | * | |||||||
3501955-CAA-C,CA | 3633914-CAA-C,CA | 22×A | * | ||||||
6447774-GTT-G,GT | 6579733-GTT-G,GT | 16×T | * | ||||||
5899095-GT-G | 6031054-GT-G | 10×T | * | ||||||
6597340-TAAAAAAAAAA-T,TAAAAAAAAAAA | 6729299-TAAAAAAAAAA-T,TAAAAAAAAAAA | 28×A | * | ||||||
13475838-C-A | 11320162-C-A | * | |||||||
13711861-A-C | 11556185-A-C | * | |||||||
6457074-GT-G | 6589033-GT-G | 9×T | * | ||||||
13483139-A-C | 11327463-A-C | * | |||||||
13501657-A-T | 11345981-A-T | * | |||||||
13610809-A-G | 11455133-A-G | * | |||||||
21898354-C-CT | 19736468-C-CT | 9×T | * | ||||||
22510619-G-T | 20348733-G-T | DYZ19 | * | ||||||
22510620-T-C | 20348734-T-C | DYZ19 | * | ||||||
9951180-C-G | 10113571-C-G | Y | * | ||||||
10013934-C-T | 10176325-C-T | Y | * | ||||||
10013949-A-T | 10176340-A-T | Y | * | ||||||
10908296-C-T | * | ||||||||
13439940-G-T | 11284264-G-T | * | |||||||
13485009-C-T | 11329333-C-T | * | |||||||
28791903-G-A | 26645756-G-A | * | |||||||
28791906-G-A | 26645759-G-A | * | |||||||
13462607-C-T | 11306931-C-T | * | |||||||
13462612-T-C | 11306936-T-C | * | |||||||
13469081-C-T | 11313405-C-T | * | |||||||
13469160-T-A | 11313484-T-A | * | |||||||
13474257-A-T | 11318581-A-T | * | |||||||
13479006-C-A | 11323330-C-A | * | |||||||
13479009-G-C | 11323333-G-C | * | |||||||
13489549-C-A | 11333873-C-A | * | |||||||
13489751-C-T | 11334075-C-T | * | |||||||
13489790-G-T | 11334114-G-T | * | |||||||
13734088-CATAGA-C | 11578412-CATAGA-C | * | |||||||
13734169-A-T | 11578493-A-T | * | |||||||
22238377-A-ATC | 20076491-A-ATC | DYZ19 | * | ||||||
22238379-CTG-C | 20076493-CTG-C | DYZ19 | * | ||||||
56871637-T-A | * | ||||||||
56871639-T-A | * | ||||||||
56874786-CT-C | 11×T | * | |||||||
10055491-T-C | 10217882-T-C | * | |||||||
10055492-G-A | 10217883-G-A | * | |||||||
10625073-A-T | * | ||||||||
10625079-G-C | * | ||||||||
13443296-C-A | 11287620-C-A | * | |||||||
13466488-C-T | 11310812-C-T | * | |||||||
13470050-C-CT | 11314374-C-CT | * | |||||||
13474527-C-A | 11318851-C-A | * | |||||||
13482270-A-T | 11326594-A-T | * | |||||||
13487835-A-C | 11332159-A-C | * | |||||||
13705477-AAT-A | 11549801-AAT-A | * | |||||||
56884636-C-CA | * | ||||||||
11018936-G-GCA | * | ||||||||
11018938-T-TCCA | * | ||||||||
13302962-CAAAAAAAAA-C,CAAAAAAAA | 11147286-CAAAAAAAAA-C,CAAAAAAAA | 17×A | * | ||||||
13462056-C-A | 11306380-C-A | * | |||||||
13474341-GC-G | 11318665-GC-G | * | |||||||
13480932-G-T | 11325256-G-T | * | |||||||
13482137-G-A | 11326461-G-A | * | |||||||
13482226-G-T | 11326550-G-T | * | |||||||
13484095-A-G | 11328419-A-G | * | |||||||
13489216-GC-G | 11333540-GC-G | * | |||||||
13489673-GA-G | 11333997-GA-G | * | |||||||
13705480-GGAATGGAATGGAA-G | 11549804-GGAATGGAATGGAA-G | * | |||||||
9962394-A-G | 10124785-A-G | Y | * | ||||||
9983924-T-G | 10146315-T-G | Y | * | ||||||
9983925-G-T | 10146316-G-T | Y | * | ||||||
13258507-G-A | 11102831-G-A | * | |||||||
13465136-C-G | 11309460-C-G | * | |||||||
13479085-C-T | 11323409-C-T | * | |||||||
13489355-GTGCGT-G | 11333679-GTGCGT-G | * | |||||||
56832495-C-T,T | * | ||||||||
13465444-CAAG-C | 11309768-CAAG-C | * | |||||||
13482204-T-G | 11326528-T-G | * | |||||||
13492032-G-T | 11336356-G-T | * | |||||||
56850025-A-G | * | ||||||||
56850026-TCA-T | * | ||||||||
56850031-C-CCT | * | ||||||||
9931593-TG-T | 10093984-TG-T | * | |||||||
10625055-G-T | * | ||||||||
10985441-T-C | * | ||||||||
13485763-G-A | 11330087-G-A | * | |||||||
13699374-T-C | 11543698-T-C | * | |||||||
13699376-G-T | 11543700-G-T | * | |||||||
56835866-TG-T | * | ||||||||
9931419-A-G | 10093810-A-G | Y | * | ||||||
9931420-G-A | 10093811-G-A | Y | * | ||||||
13502682-T-C | 11347006-T-C | * | |||||||
26488166-TAA-T | 24342019-TAA-T | P1_Y1 | 15×A | * | |||||
56880822-T-A,TTA | * | ||||||||
5704514-A-G | 5836473-A-G | * | ** | ||||||
6778819-T-C | 6910778-T-C | Y | Y | * | *** | ||||
7142213-A-G | 7274172-A-G | FT18991 | Y | * | ** | ||||
7343621-C-A | 7475580-C-A | Y | * | ** | |||||
14291707-T-C | 12171001-T-C | Y | * | *** | |||||
15149687-G-A | 13037774-G-A | Y | * | ** | |||||
15301983-T-C | 13190082-T-C | Y | * | *** | |||||
18261800-T-A | 16149920-T-A | * | *** | ||||||
18860096-T-C | 16748216-T-C | Y | * | *** | |||||
22299001-C-G | 20137115-C-G | DYZ19 | * | * | |||||
22778375-A-G | 20616489-A-G | Y | * | *** | |||||
9937955-A-G | 10100346-A-G | Y | * | ||||||
13463618-C-T | 11307942-C-T | * | |||||||
13469111-A-G | 11313435-A-G | * | |||||||
13476685-G-C | 11321009-G-C | * | |||||||
13482771-A-C | 11327095-A-C | * | |||||||
13482778-C-T | 11327102-C-T | * | |||||||
13636944-ATGAT-A | 11481268-ATGAT-A | * | |||||||
13636951-T-A | 11481275-T-A | * | |||||||
28807330-G-A | 26661183-G-A | BY151886 | * | ||||||
13469971-G-A | 11314295-G-A | * | |||||||
13484067-C-A | 11328391-C-A | * | |||||||
13484069-T-G | 11328393-T-G | * | |||||||
22238310-C-G | 20076424-C-G | DYZ19 | * | ||||||
5786606-C-A | 5918565-C-A | * | |||||||
13476601-G-T | 11320925-G-T | * | |||||||
6440991-TA-T,TAA | 6572950-TA-T,TAA | 19×A | * | ||||||
13473920-A-G | 11318244-A-G | * | |||||||
13474753-C-G | 11319077-C-G | * | |||||||
13474765-G-C | 11319089-G-C | * | |||||||
13480969-C-G | 11325293-C-G | * | |||||||
13545305-GAGAGAA-G | 11389629-GAGAGAA-G | * | |||||||
13545321-GA-G | 11389645-GA-G | * | |||||||
13545324-GAAAGAAAGAAGGAAGGAA-G | 11389648-GAAAGAAAGAAGGAAGGAA-G | * | |||||||
13545350-A-G | 11389674-A-G | * | |||||||
13545394-AGAAAGAAG-A | 11389718-AGAAAGAAG-A | * | |||||||
28810285-G-T | 26664138-G-T | * | |||||||
10908299-CCT-C | * | ||||||||
13263664-G-T | 11107988-G-T | * | |||||||
13263694-G-C | 11108018-G-C | * | |||||||
13263702-C-A | 11108026-C-A | * | |||||||
13263758-T-G | 11108082-T-G | * | |||||||
13263766-C-A | 11108090-C-A | * | |||||||
13263770-T-C | 11108094-T-C | * | |||||||
13263773-A-T | 11108097-A-T | * | |||||||
13263787-C-T | 11108111-C-T | * | |||||||
13466486-G-T | 11310810-G-T | * | |||||||
13470550-C-T | 11314874-C-T | * | |||||||
13478976-G-A | 11323300-G-A | * | |||||||
13478987-C-T | 11323311-C-T | * | |||||||
13478996-C-A | 11323320-C-A | * | |||||||
13479031-C-G | 11323355-C-G | * | |||||||
13479044-C-A | 11323368-C-A | * | |||||||
13484263-C-A | 11328587-C-A | * | |||||||
13698922-G-C | 11543246-G-C | * | |||||||
22238356-T-C | 20076470-T-C | DYZ19 | * | ||||||
22238371-C-G | 20076485-C-G | DYZ19 | * | ||||||
22238373-A-G | 20076487-A-G | DYZ19 | * | ||||||
22297944-A-G | 20136058-A-G | DYZ19 | * | ||||||
22448751-T-A | 20286865-T-A | DYZ19 | * | ||||||
22448756-G-A | 20286870-G-A | DYZ19 | * | ||||||
28586715-T-C | 26440568-T-C | * | |||||||
56834782-T-TTCCACTCCAC | * | ||||||||
9975265-C-T | 10137656-C-T | Y | * | ||||||
9975270-C-T | 10137661-C-T | Y | * | ||||||
13489286-T-G | 11333610-T-G | * | |||||||
22512604-G-A | 20350718-G-A | DYZ19 | * | ||||||
28797015-G-T | 26650868-G-T | * | |||||||
13489384-G-T | 11333708-G-T | * | |||||||
13693697-TGAAATGGAATGGAATGGAATGGAAC-T | 11538021-TGAAATGGAATGGAATGGAATGGAAC-T | * | |||||||
22475729-A-G | 20313843-A-G | DYZ19 | * | ||||||
13233319-GA-G,GAA | 11077643-GA-G,GAA | 17×A | * | ||||||
3278326-C-T | 3410285-C-T | * | |||||||
56829520-C-CATTCCATTCCTGTCT | * | ||||||||
22475586-A-T | 20313700-A-T | DYZ19 | * | ||||||
10909696-G-C | * | ||||||||
13469929-G-T | 11314253-G-T | * | |||||||
13470037-T-A | 11314361-T-A | * | |||||||
13475390-G-C | 11319714-G-C | * | |||||||
13475403-G-A | 11319727-G-A | * | |||||||
13508327-ACT-A | 11352651-ACT-A | 8×CT | * | ||||||
22463953-C-T | 20302067-C-T | DYZ19 | * | ||||||
13472027-C-T | 11316351-C-T | * | |||||||
13487946-G-C | 11332270-G-C | * | |||||||
13489104-C-A | 11333428-C-A | * | |||||||
25862980-G-GA | 23716833-G-GA | P1_Y1 | 10×A | * | |||||
28802744-GATTCAAATTGCATAGAATGGAATCAAATGGAATGCGGTGA-G | 26656597-GATTCAAATTGCATAGAATGGAATCAAATGGAATGCGGTGA-G | * | |||||||
13469145-T-G | 11313469-T-G | * | |||||||
13475771-A-T | 11320095-A-T | * | |||||||
13478447-C-T | 11322771-C-T | * | |||||||
13479020-C-T | 11323344-C-T | * | |||||||
56884030-G-A | * | ||||||||
13449960-T-TTCCATACCATTCCATTCCATTGCATTCCACTCCATTCCACTCCACTCCAATCAACTCCGCTCCACTCCACTCCACTTCACTCCAATCCACTCCAC,TTCCATTCCATACCATTCCATTCCATTGCATTCCACTCCATTCCACTCCACTCCAATCAACTCCACTCCACTCCACTTCACTCCAATCCACTCCAC | 11294284-T-TTCCATACCATTCCATTCCATTGCATTCCACTCCATTCCACTCCACTCCAATCAACTCCGCTCCACTCCACTCCACTTCACTCCAATCCACTCCAC,TTCCATTCCATACCATTCCATTCCATTGCATTCCACTCCATTCCACTCCACTCCAATCAACTCCACTCCACTCCACTTCACTCCAATCCACTCCAC | * | |||||||
13461232-G-T | 11305556-G-T | * | |||||||
13468103-C-G | 11312427-C-G | * | |||||||
13479063-C-G | 11323387-C-G | * | |||||||
13489363-C-CATATA | 11333687-C-CATATA | * | |||||||
13505911-T-C | 11350235-T-C | * | |||||||
13505913-C-T | 11350237-C-T | * | |||||||
13488844-G-GCT | 11333168-G-GCT | * | |||||||
9980213-AG-A | 10142604-AG-A | * | |||||||
9980216-A-T | 10142607-A-T | Y | * | ||||||
13465140-GGT-G | 11309464-GGT-G | * | |||||||
13478490-G-C | 11322814-G-C | * | |||||||
13478491-G-C | 11322815-G-C | * | |||||||
13489854-C-G | 11334178-C-G | * | |||||||
13489855-C-A | 11334179-C-A | * | |||||||
13489860-G-A | 11334184-G-A | * | |||||||
13692963-T-TGGAAA | 11537287-T-TGGAAA | * | |||||||
13692974-G-GAACTC | 11537298-G-GAACTC | * | |||||||
56833327-A-ATT | * | ||||||||
56866866-C-CAA | * | ||||||||
13464975-C-G | 11309299-C-G | * | |||||||
13469376-T-A | 11313700-T-A | * | |||||||
11565275-ACG- | * | ||||||||
11565278-AATTTAAT- | * | ||||||||
11565287-CAATGGA- | * | ||||||||
5507713-ATT-A,AT | 5639672-ATT-A,AT | 24×T | * | ||||||
9469799-G- | * | ||||||||
13465101-C-T | 11309425-C-T | * | |||||||
11334024-C- | * | ||||||||
22509684-T-C | 20347798-T-C | DYZ19 | * | ||||||
56706982-T-C | * | ||||||||
13470597-A-T | 11314921-A-T | * | |||||||
13721564-T-G | 11565888-T-G | * | |||||||
13721566-G-C | 11565890-G-C | * | |||||||
56834415-T-TTCCTCTCCAC | * | ||||||||
13470262-CT-C | 11314586-CT-C | * | |||||||
13470268-C-A | 11314592-C-A | * | |||||||
22364685-C-G | 20202799-C-G | DYZ19 | * | ||||||
22486358-GT-G | 20324472-GT-G | DYZ19 | * | ||||||
22479532-T-A | 20317646-T-A | BY25217 | DYZ19 | * | |||||
11292967-CCATTCCATTCCATTCCATTCCATT- | * | ||||||||
13489270-C-T | 11333594-C-T | * | |||||||
11550410-ATGGCGTGGAATGGAAT- | * | ||||||||
11578457-AACGGAATTGAATGTCATGGAATGGAATGGC- | * | ||||||||
13474782-A-G | 11319106-A-G | * | |||||||
13475720-A-C | 11320044-A-C | * | |||||||
13475723-C-T | 11320047-C-T | * | |||||||
13475739-T-C | 11320063-T-C | * | |||||||
10846979-A-T | * | ||||||||
13464979-G-T | 11309303-G-T | * | |||||||
13464985-A-G | 11309309-A-G | * | |||||||
56685597-A-G | * | ||||||||
7534382-GTTTTTTTTTGTTTT-G | 7666341-GTTTTTTTTTGTTTT-G | 9×T | * | ||||||
13694834-A-G | 11539158-A-G | * | |||||||
11747893-A- | * | ||||||||
22272855-TGG-T | 20110969-TGG-T | DYZ19 | * | ||||||
22272860-A-C | 20110974-A-C | DYZ19 | * | ||||||
56856117-A-AG,G | * | ||||||||
18931744-T-C | 16819864-T-C | Y | Y | * | |||||
18931748-G-C | 16819868-G-C | Y | Y | * | |||||
18931749-G-C | 16819869-G-C | Y | Y | * | |||||
18931750-G-C | 16819870-G-C | Y | Y | * | |||||
18931754-G-A | 16819874-G-A | Y | Y | * | |||||
56834395-C-CTCCACTCCACTCCATTCCACTCCTATCCACTCCAT | * | ||||||||
13484920-G-A | 11329244-G-A | * | |||||||
13489727-CT-C | 11334051-CT-C | * | |||||||
11334055-G- | * | ||||||||
13489735-G-GGTGA | 11334059-G-GGTGA | * | |||||||
11550413-G- | * | ||||||||
13707268-G-T | 11551592-G-T | * | |||||||
22509554-G-T | 20347668-G-T | DYZ19 | * | ||||||
56856795-T-TATATTAA | * | ||||||||
13466401-C-T | 11310725-C-T | * | |||||||
13466419-C-T | 11310743-C-T | * | |||||||
13469110-C-A | 11313434-C-A | * | |||||||
13476679-C-CCG | 11321003-C-CCG | * | |||||||
13476695-G-C | 11321019-G-C | * | |||||||
13476708-C-A | 11321032-C-A | * | |||||||
13476720-G-A | 11321044-G-A | * | |||||||
22475020-C-T | 20313134-C-T | DYZ19 | * | ||||||
22475052-G-A | 20313166-G-A | BY48004 | DYZ19 | * | |||||
13474393-G-T | 11318717-G-T | * | |||||||
11321185-GC- | * | ||||||||
13478368-C-A | 11322692-C-A | * | |||||||
13478381-A-ATCCG | 11322705-A-ATCCG | * | |||||||
13478384-AGGAG-A | 11322708-AGGAG-A | * | |||||||
13479028-T-A | 11323352-T-A | * | |||||||
11334025-C- | * | ||||||||
13466922-T-C | 11311246-T-C | * | |||||||
11578452-AATGGAACGGAATTGAATGTC- | * | ||||||||
13489686-CAT-C | 11334010-CAT-C | * | |||||||
13465053-A-G | 11309377-A-G | * | |||||||
13469168-G-T | 11313492-G-T | * | |||||||
13484911-G-A | 11329235-G-A | * | |||||||
10895887-A-C | * | ||||||||
10967547-CCATTCCATTA-C | * | ||||||||
13465103-C-A | 11309427-C-A | * | |||||||
13909599-CAAAA-C | 11788893-CAAAA-C | 14×A | * | ||||||
22238276-G-C | 20076390-G-C | DYZ19 | * | ||||||
11318185-GC- | * | ||||||||
13469369-G-A | 11313693-G-A | * | |||||||
13451163-T-TCCTCTGCACTCC | 11295487-T-TCCTCTGCACTCC | * | |||||||
12631481-CT-C,C | 13×T | * | |||||||
13484181-T-A | 11328505-T-A | * | |||||||
5502254-C-CAA | 5634213-C-CAA | 16×A | * | ||||||
7567753-C-CT,CTT | 7699712-C-CT,CTT | 25×T | * | ||||||
14612335-TGATA-T,T | 12500541-TGATA-T,T | 12×GATA | * | ||||||
7788735-C-CA | 7920694-C-CA | 10×A | * | ||||||
13481475-A-G | 11325799-A-G | * | |||||||
22287092-AAG-A | 20125206-AAG-A | DYZ19 | * | ||||||
13445362-CAAAA-C,CAAA | 11289686-CAAAA-C,CAAA | 15×A | * | ||||||
13470623-C-G | 11314947-C-G | * | |||||||
22272852-G-GAT | 20110966-G-GAT | DYZ19 | * | ||||||
11321007-C- | * | ||||||||
13489963-A-G | 11334287-A-G | * | |||||||
26433572-C-CTT | 24287425-C-CTT | P1_Y1 | 19×T | * | |||||
14612239-G-GGATAGATA,GGATAGATA | 12500445-G-GGATAGATA,GGATAGATA | 9×GATA | * | ||||||
3788671-T-TAA | 3920630-T-TAA | 13×A | * | ||||||
13481470-C-A | 11325794-C-A | * | |||||||
10908294-C-CTA | * | ||||||||
13484070-A-G | 11328394-A-G | * | |||||||
13484114-A-C | 11328438-A-C | * | |||||||
56706804-T-A | * | ||||||||
13470581-G-T | 11314905-G-T | * | |||||||
13396622-AT-A | 11240946-AT-A | * | |||||||
13396625-CTCCT-C | 11240949-CTCCT-C | * | |||||||
13396634-CTCATCTGAG-C | 11240958-CTCATCTGAG-C | * | |||||||
13396654-T-C | 11240978-T-C | * | |||||||
13396655-ATC-A | 11240979-ATC-A | * | |||||||
13476944-G-T | 11321268-G-T | * | |||||||
13476952-A-T | 11321276-A-T | * | |||||||
13485940-G-A | 11330264-G-A | * | |||||||
13485950-G-A | 11330274-G-A | * | |||||||
13734123-AATGGAATGGAACGGAATTGAATGTC-A | 11578447-AATGGAATGGAACGGAATTGAATGTC-A | * | |||||||
56876123-GCAAAAAAAAAAAAAAAAAAAAAAA-G | * | ||||||||
13489402-T-A | 11333726-T-A | * | |||||||
13505887-C-A | 11350211-C-A | * | |||||||
13505902-A-G | 11350226-A-G | * | |||||||
13519282-A-G | 11363606-A-G | * | |||||||
13711495-A-C | 11555819-A-C | * | |||||||
56685744-T-A | * | ||||||||
13482124-G-C | 11326448-G-C | * | |||||||
13468126-T-A | 11312450-T-A | * | |||||||
13468150-T-A | 11312474-T-A | * | |||||||
13266803-G-A | 11111127-G-A | * | |||||||
2759942-C-A | 2891901-C-A | Y | Y | * | |||||
2946102-T-C | 3078061-T-C | * | |||||||
2994613-G-GTTT | 3126572-G-GTTT | 14×T | * | ||||||
3134179-G-A | 3266138-G-A | * | |||||||
3266103-T-C | 3398062-T-C | * | |||||||
3539980-G-A | 3671939-G-A | * | |||||||
3700360-T-C | 3832319-T-C | * | |||||||
3845906-C-T | 3977865-C-T | * | |||||||
3951859-A-ACTG | 4083818-A-ACTG | * | |||||||
3951862-A-T | 4083821-A-T | * | |||||||
4318815-AT-A | 4450774-AT-A | * | |||||||
4430676-CACA-C | 4562635-CACA-C | 5×ACA | * | ||||||
4487836-C-A | 4619795-C-A | * | |||||||
5035558-TTG-T,T | 5167517-TTG-T,T | 22×TG | * | ||||||
5115855-A-C | 5247814-A-C | * | |||||||
5142277-T-C | 5274236-T-C | * | |||||||
5155891-C-A | 5287850-C-A | * | |||||||
5512903-A-G | 5644862-A-G | * | |||||||
5523917-C-CTTT | 5655876-C-CTTT | 24×T | * | ||||||
5786607-TC-T | 5918566-TC-T | * | |||||||
6020688-GT-G,GTTT | 6152647-GT-G,GTTT | 23×T | * | ||||||
6390077-A-G | 6522036-A-G | * | |||||||
6489371-C-CA,CA | 6621330-C-CA,CA | 25×A | * | ||||||
6688165-T-TAA | 6820124-T-TAA | 10×A | * | ||||||
6861417-A-G | 6993376-A-G | Y | Y | * | |||||
6981281-C-T | 7113240-C-T | Y | Y | * | |||||
7029435-T-TTC | 7161394-T-TTC | * | |||||||
7186507-ATTT-A | 7318466-ATTT-A | 13×T | * | ||||||
7198817-C-CAA | 7330776-C-CAA | 10×A | * | ||||||
7392082-A-G | 7524041-A-G | Y | * | ||||||
7470700-C-CAAAA | 7602659-C-CAAAA | IR1_L | 25×A | * | |||||
7742916-TAA-T | 7874875-TAA-T | 11×A | * | ||||||
7960965-AT-A | 8092924-AT-A | 10×T | * | ||||||
8008138-T-C | 8140097-T-C | Y | Y | * | |||||
8112197-AC-A | 8244156-AC-A | * | |||||||
8158241-A-G | 8290200-A-G | Y | Y | * | |||||
8407602-T-TG,TG | 8539561-T-TG,TG | * | |||||||
8470549-C-CAAAAAA | 8602508-C-CAAAAAA | 22×A | * | ||||||
8563745-CTT-C,CT | 8695704-CTT-C,CT | 21×T | * | ||||||
9007946-C-A | 9170337-C-A | BY12542 | Y | * | |||||
9364764-C-G | 9527155-C-G | Y | * | ||||||
9453334-T-C | 9615725-T-C | Y | Y | * | |||||
9645653-CTT-C,CTTTT | 9808044-CTT-C,CTTTT | IR3_Prx | 20×T | * | |||||
9805139-A-G | 9967530-A-G | Y | Y | * | |||||
9963459-G-GCACGGTCTCCTTC | 10125850-G-GCACGGTCTCCTTC | * | |||||||
10032391-AT-A | 10194782-AT-A | * | |||||||
10082054-C-T | 10244445-C-T | * | |||||||
10693715-A- | * | ||||||||
10749157-C-T | * | ||||||||
10767676-C-CACTCCACTAT | * | ||||||||
10773464-CG-C | * | ||||||||
10870514-CTCCAT-C | * | ||||||||
10922136-T-G | * | ||||||||
10924980-CTCCACTCCATTCCATTCCATTCCAT-C | * | ||||||||
10934821-A-T | * | ||||||||
10955038-GTCCAGTCCACTCCGTTCCATTCCATTCCATTCCATTGCACTCCACTCCACTACACTACACTACGCTACACTACACTACTCTCCATTATAGTCCATTCCACTCCATTTCAGTCGACTCCAC-G | * | ||||||||
10986925-T-TC | * | ||||||||
13291238-C-T | 11135562-C-T | * | |||||||
13348769-A-G | 11193093-A-G | * | |||||||
13388702-A-T | 11233026-A-T | * | |||||||
13405154-T-TA | 11249478-T-TA | * | |||||||
13447167-C-CG | 11291491-C-CG | * | |||||||
13448670-A-T | 11292994-A-T | * | |||||||
13448699-C-T | 11293023-C-T | * | |||||||
13460521-T-A | 11304845-T-A | * | |||||||
13462288-T-C | 11306612-T-C | * | |||||||
13464957-C-G | 11309281-C-G | * | |||||||
13464962-AG-A | 11309286-AG-A | * | |||||||
13464967-C-G | 11309291-C-G | * | |||||||
13464978-A-T | 11309302-A-T | * | |||||||
13464981-C-G | 11309305-C-G | * | |||||||
13465128-TTACATC-T | 11309452-TTACATC-T | * | |||||||
11309458-C- | * | ||||||||
13465137-C-T | 11309461-C-T | * | |||||||
13465138-CA-C | 11309462-CA-C | * | |||||||
13465148-G-GCAA | 11309472-G-GCAA | * | |||||||
13465976-A-T | 11310300-A-T | * | |||||||
13465984-C-CCCA | 11310308-C-CCCA | * | |||||||
13465986-C-T | 11310310-C-T | * | |||||||
13466918-G-A | 11311242-G-A | * | |||||||
13467269-T-A | 11311593-T-A | * | |||||||
13467295-G-C | 11311619-G-C | * | |||||||
13467310-A-G | 11311634-A-G | * | |||||||
13467379-C-G | 11311703-C-G | FT444007 | * | ||||||
13469130-C-CCTTTAGGCAGAGCTTAGAGCAGAGTTACATCACCTGTGTGATCAGTGCAGAGATATCTCACAATGCCT | 11313454-C-CCTTTAGGCAGAGCTTAGAGCAGAGTTACATCACCTGTGTGATCAGTGCAGAGATATCTCACAATGCCT | * | |||||||
13469172-TCA-T | 11313496-TCA-T | * | |||||||
13469175-GTGCAGAGATATGTCACAATGCCTCCATAGGCAAATCCAAGTTGAGATTCTGTCACCTGTGTGATC-G | 11313499-GTGCAGAGATATGTCACAATGCCTCCATAGGCAAATCCAAGTTGAGATTCTGTCACCTGTGTGATC-G | * | |||||||
13469294-C-T | 11313618-C-T | * | |||||||
13469298-A-T | 11313622-A-T | * | |||||||
13470275-C-T | 11314599-C-T | * | |||||||
13470280-A-T | 11314604-A-T | * | |||||||
13470281-C-T | 11314605-C-T | * | |||||||
13473766-G-A | 11318090-G-A | * | |||||||
13473926-A-C | 11318250-A-C | * | |||||||
11319664-T- | * | ||||||||
13475901-G-T | 11320225-G-T | * | |||||||
13475933-A-T | 11320257-A-T | * | |||||||
11321008-T- | * | ||||||||
13476691-G-C | 11321015-G-C | * | |||||||
13478613-A-C | 11322937-A-C | * | |||||||
13478651-C-T | 11322975-C-T | BY86007 | * | ||||||
13478655-T-A | 11322979-T-A | * | |||||||
11323444-A- | * | ||||||||
11323445-T- | * | ||||||||
13479153-C-T | 11323477-C-T | * | |||||||
13479163-C-CTGGTAAATTCCGGCTGAAGCTCTCCCAA | 11323487-C-CTGGTAAATTCCGGCTGAAGCTCTCCCAA | * | |||||||
13481502-G-C | 11325826-G-C | * | |||||||
13484171-CAG-C | 11328495-CAG-C | * | |||||||
13484919-T-C | 11329243-T-C | * | |||||||
13484941-C-A | 11329265-C-A | * | |||||||
13484986-T-G | 11329310-T-G | * | |||||||
13487272-C-T | 11331596-C-T | * | |||||||
13488806-G-A,T | 11333130-G-A,T | * | |||||||
13489551-TG-T | 11333875-TG-T | * | |||||||
13489613-C-CCA | 11333937-C-CCA | * | |||||||
13501979-C-G | 11346303-C-G | * | |||||||
13504454-G-C | 11348778-G-C | * | |||||||
13514781-G-A | 11359105-G-A | * | |||||||
13537682-A-C | 11382006-A-C | * | |||||||
13616427-T-TAAA | 11460751-T-TAAA | 28×A | * | ||||||
13638776-G-T | 11483100-G-T | * | |||||||
13702157-T-G | 11546481-T-G | * | |||||||
13718123-T-A | 11562447-T-A | * | |||||||
13728479-A-AGAATGGAATGGAATGGAATGGAATG | 11572803-A-AGAATGGAATGGAATGGAATGGAATG | 9×GAATG | * | ||||||
13745151-A-C | 11589475-A-C | * | |||||||
14153382-C-G | 12032676-C-G | Y | * | ||||||
14153383-T-A | 12032677-T-A | Y | * | ||||||
14255706-C-T | 12135000-C-T | Y | * | ||||||
14468822-G-C | 12348091-G-C | Y | Y | 14×A | * | ||||
14986179-A-AGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTG | 12874247-A-AGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTG | * | |||||||
15045172-C-T | 12933262-C-T | Y | * | ||||||
15045176-G-T | 12933266-G-T | Y | * | ||||||
15045182-G-T | 12933272-G-T | Y | * | ||||||
15197744-CTT-C | 13085830-CTT-C | 10×T | * | ||||||
15321328-GT-G,GTTT | 13209446-GT-G,GTTT | 25×T | * | ||||||
15352706-G-A | 13240825-G-A | Y | Y | * | |||||
15490256-TAA-T | 13378376-TAA-T | 10×A | * | ||||||
15643595-A-G | 13531715-A-G | Y | * | ||||||
15643601-C-T | 13531721-C-T | Y | * | ||||||
15643622-T-TC | 13531742-T-TC | * | |||||||
15753178-CTTTTTT-C,CTTTT | 13641298-CTTTTTT-C,CTTTT | 20×T | * | ||||||
15796164-A-G | 13684284-A-G | Y | * | ||||||
15796171-A-T | 13684291-A-T | Y | * | ||||||
15807280-T-C | 13695400-T-C | Y | * | ||||||
15931970-T-C | 13820090-T-C | Y | * | ||||||
15932073-T-C | 13820193-T-C | Y | * | ||||||
15956832-G-A | 13844952-G-A | Y | Y | * | |||||
16357341-T-C | 14245461-T-C | Y | Y | * | |||||
16605609-A-G | 14493729-A-G | Y | Y | * | |||||
16882059-C-T | 14770179-C-T | Y | * | ||||||
17050121-G-T | 14938241-G-T | Y | Y | * | |||||
17050514-T-TA | 14938634-T-TA | 8×A | * | ||||||
17322366-A-T | 15210486-A-T | Y | Y | * | |||||
17728934-C-T | 15617054-C-T | Y | Y | * | |||||
17947121-T-C | 15835241-T-C | Y | Y | * | |||||
17951299-ATTTTTTTT-A,ATTTTTTT | 15839419-ATTTTTTTT-A,ATTTTTTT | 25×T | * | ||||||
18019515-CGT-C | 15907635-CGT-C | * | |||||||
19048005-C-A | 16936125-C-A | Y | Y | * | |||||
19174327-C-A | 17062447-C-A | Y | * | ||||||
19290546-A-T | 17178666-A-T | Y | Y | * | |||||
19382416-G-A | 17270536-G-A | Y | * | ||||||
20557567-A-G | 18395681-A-G | P5_Dst | * | ||||||
21498234-T-C | 19336348-T-C | Y | * | ||||||
21538981-A-G | 19377095-A-G | Y | * | ||||||
21660280-A-G | 19498394-A-G | Y | Y | * | |||||
21807043-C-T | 19645157-C-T | Y | Y | * | |||||
22093188-G-A | 19931302-G-A | Y | Y | * | |||||
22279786-C-T | 20117900-C-T | DYZ19 | * | ||||||
22283632-C-G | 20121746-C-G | DYZ19 | * | ||||||
22321849-C-G | 20159963-C-G | DYZ19 | * | ||||||
22353535-A-T | 20191649-A-T | DYZ19 | * | ||||||
22364656-G-T | 20202770-G-T | DYZ19 | * | ||||||
22364663-T-C | 20202777-T-C | DYZ19 | * | ||||||
22367972-GT-G | 20206086-GT-G | DYZ19 | * | ||||||
22367974-GAGTGTTGCAGTACTTAAAGCTGTTATGTCCAGAGTTTGATCCTTCAGATGTTTCCAGAGTTTCTTCCTTCTGGCAGGTTCGTGGTCTTGCTCACTTCTTTAATGAAGCTGCAGACCATACTGGT-G | 20206088-GAGTGTTGCAGTACTTAAAGCTGTTATGTCCAGAGTTTGATCCTTCAGATGTTTCCAGAGTTTCTTCCTTCTGGCAGGTTCGTGGTCTTGCTCACTTCTTTAATGAAGCTGCAGACCATACTGGT-G | DYZ19 | * | ||||||
20274510-ATTAAAGGTGTTATGTCCAGAGTTTGTTCCTTCAGATGTGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGGCTTGCTCACTTCAAGAATGAAGCTGCAGACCTTTACGGTGAGTGTTACAGCAC- | DYZ19 | * | |||||||
22446148-TTTTA-T | 20284262-TTTTA-T | DYZ19 | * | ||||||
22458143-TTTGTTCCTTCAGATAAGTCCAGAGA-T | 20296257-TTTGTTCCTTCAGATAAGTCCAGAGA-T | DYZ19 | * | ||||||
22473485-G-C | 20311599-G-C | DYZ19 | * | ||||||
22473514-A-G | 20311628-A-G | DYZ19 | * | ||||||
22479419-T-C | 20317533-T-C | DYZ19 | * | ||||||
22479446-G-A | 20317560-G-A | DYZ19 | * | ||||||
22479465-T-C | 20317579-T-C | DYZ19 | * | ||||||
22479545-A-G | 20317659-A-G | DYZ19 | * | ||||||
22486538-GCCGCCGACCTTAGTGGTGAGTGTTACACCATTTAAAGGTGTTATGTCCAGACTTTGTTCCTTCAGATATGTCCGGAGATTCTTCCTTCTGGCAGGTTCTTTGTCTTGCTCATTGCAAGAATGAAA-G | 20324652-GCCGCCGACCTTAGTGGTGAGTGTTACACCATTTAAAGGTGTTATGTCCAGACTTTGTTCCTTCAGATATGTCCGGAGATTCTTCCTTCTGGCAGGTTCTTTGTCTTGCTCATTGCAAGAATGAAA-G | DYZ19 | * | ||||||
22508734-C-T | 20346848-C-T | DYZ19 | * | ||||||
22510562-C-A | 20348676-C-A | DYZ19 | * | ||||||
22510611-G-C | 20348725-G-C | BY225664 | DYZ19 | * | |||||
22510612-G-T | 20348726-G-T | BY35418 | DYZ19 | * | |||||
22510615-T-C | 20348729-T-C | DYZ19 | * | ||||||
22590654-A-G | 20428768-A-G | Y | Y | * | |||||
22610030-CTT-C | 20448144-CTT-C | 10×T | * | ||||||
22790924-C-G | 20629038-C-G | Y | Y | * | |||||
22829665-G-T | 20667779-G-T | Y | Y | * | |||||
23003578-T-C | 20841692-T-C | Y | Y | * | |||||
23017462-C-CT | 20855576-C-CT | * | |||||||
23019600-A-G | 20857714-A-G | Y | * | ||||||
23210311-A-G | 21048425-A-G | Y | * | ||||||
23452126-A-G | 21290240-A-G | Y | Y | * | |||||
24423271-A-G | 22277124-A-G | Y | * | ||||||
25106373-G-C | 22960226-G-C | g1 | * | ||||||
25335133-G-GT | 23188986-G-GT | P2_r1 | 11×T | * | |||||
27038161-T-A | 24892014-T-A | P1_r4 | * | ||||||
28117295-C-A,A | 25971148-C-A,A | P1_b4 | * | ||||||
28747718-T-C | 26601571-T-C | Y | * | ||||||
56706781-A-C | * | ||||||||
56715493-A-G | * | ||||||||
56756868-GGAATGGAATGGA-G | * | ||||||||
56757026-A-T | * | ||||||||
56763406-A-T | * | ||||||||
56763426-T-G | * | ||||||||
56828547-T-A | * | ||||||||
56839465-G-A | * | ||||||||
56850414-G-C | * | ||||||||
56876148-A-G | * | ||||||||
7282157-TTC-T | 7414116-TTC-T | ** | |||||||
26053247-T-A | 23907100-T-A | P1_Y1 | ** | ||||||
13485365-G-C | 11329689-G-C | ** | |||||||
3208835-A-G | 3340794-A-G | ** | |||||||
9063124-A-G | 9225515-A-G | ** | |||||||
19644357-C-A | 17532477-C-A | P5_Prx | ** | ||||||
19764719-C-A | 17652839-C-A | P5_Prx | ** | ||||||
19868813-T-G | 17756933-T-G | P5_Prx | ** | ||||||
22458159-A-C | 20296273-A-C | DYZ19 | ** | ||||||
22458168-A-T | 20296282-A-T | DYZ19 | ** | ||||||
16447158-AACACAC-A | 14335278-AACACAC-A | 22×AC | *** | ||||||
10767663-T-C | *** | ||||||||
5905890-CAAAA-C | 6037849-CAAAA-C | 27×A | *** | ||||||
13463365-G-C | 11307689-G-C | *** | |||||||
13463370-C-G | 11307694-C-G | *** | |||||||
10962561-A-T | *** | ||||||||
13478348-A-C,T | 11322672-A-C,T | *** | |||||||
22164376-CA-C,CAA | 20002490-CA-C,CAA | 22×A | *** | ||||||
13585053-CAAAA-C | 11429377-CAAAA-C | 19×A | *** | ||||||
10962559-C-T | *** | ||||||||
13479100-G-T | 11323424-G-T | *** | |||||||
6767604-TAA-T,TA | 6899563-TAA-T,TA | 13×A | *** | ||||||
13919208-CAA-C,CAAA | 11798502-CAA-C,CAAA | 17×A | *** | ||||||
3332273-T-C | 3464232-T-C | *** | |||||||
13287714-CGG-C | 11132038-CGG-C | 9×G | *** | ||||||
13467551-T-A | 11311875-T-A | *** | |||||||
17278306-GAAAGAA-G,GAGAA | 15166426-GAAAGAA-G,GAGAA | *** | |||||||
19437205-G-A | 17325325-G-A | *** | |||||||
21328805-CAA-C,CA | 19166919-CAA-C,CA | 30×A | *** | ||||||
22510299-C-G | 20348413-C-G | DYZ19 | *** | ||||||
26499950-GT-G | 24353803-GT-G | P1_Y1 | *** | ||||||
56828923-TCATTCCATTCCATTCCATTCCATTCCATGTCATTCCATTC-T,TCATTCCATTC | 5×CATTC | *** | |||||||
56868350-C-G | *** | ||||||||
14227-C-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.