MacLean
BigY2: 179218MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 179218 |
---|---|---|---|---|---|---|---|---|
11001861-G-A | A* | |||||||
20021496-T-TTA | 17909616-T-TTA | P5_Prx | 15×TA | A* | ||||
24345318-T-A | 22199171-T-A | P3_t1 | A* | |||||
24245347-C-T | 22099200-C-T | P3_b1 | A* | |||||
7032328-G-T | 7164287-G-T | Y | A* | |||||
19790036-G-A | 17678156-G-A | P5_Prx | A* | |||||
22265331-G-T | 20103445-G-T | DYZ19 | A* | |||||
8207556-C-CT | 8339515-C-CT | 10×T | A* | |||||
8734555-C-T | 8866514-C-T | BY75511 | Y | Y | + | |||
13688624-T-A | 11532948-T-A | BY88505 | + | |||||
17554922-T-C | 15443042-T-C | BY115674 | Y | Y | + | |||
18386402-A-G | 16274522-A-G | BY121542 | P6_Gap | + | ||||
23346905-C-G | 21185019-C-G | BY144737 | Y | Y | + | |||
21798295-G-T | 19636409-G-T | BY135490 | Y | Y | + | |||
15510226-C-A | 13398346-C-A | BY102086 | Y | Y | + | |||
7640325-T-C | 7772284-T-C | BY66457 | Y | Y | + | |||
8468980-G-T | 8600939-G-T | BY73089 | Y | Y | + | |||
28795489-C-T | 26649342-C-T | * | ||||||
8426377-G-GCTGCTTCTT | 8558336-G-GCTGCTTCTT | 22×CTT | * | |||||
11675626-G-A | ** | |||||||
13692776-A-G | 11537100-A-G | ** | ||||||
13617971-A-C | 11462295-A-C | ** | ||||||
13900164-C-A | 11779458-C-A | ** | ||||||
13885649-G-C | 11764943-G-C | ** | ||||||
13627282-T-A | 11471606-T-A | ** | ||||||
13644689-AT-A | 11489013-AT-A | ** | ||||||
13879401-G-T | 11758695-G-T | ** | ||||||
13885383-A-T | 11764677-A-T | ** | ||||||
13858531-A-G | 11737825-A-G | ** | ||||||
13692786-A-T | 11537110-A-T | ** | ||||||
11649956-T-G | ** | |||||||
11651411-G-T | ** | |||||||
11651719-T-C | ** | |||||||
11654653-G-A | ** | |||||||
13584719-G-C | 11429043-G-C | ** | ||||||
11674169-G-T | ** | |||||||
11664146-G-T | ** | |||||||
13527724-T-G | 11372048-T-G | ** | ||||||
13577717-G-T | 11422041-G-T | ** | ||||||
13218635-C-G | 11062959-C-G | ** | ||||||
10998123-C-G | ** | |||||||
11005961-G-C | ** | |||||||
11005979-T-C | ** | |||||||
11010579-CA-C | ** | |||||||
11013852-C-CTGTATTACTCCCTTA | ** | |||||||
11015348-C-T | ** | |||||||
11024285-G-A | FT92248 | ** | ||||||
13213387-T-C | 11057711-T-C | ** | ||||||
13213544-A-C | 11057868-A-C | ** | ||||||
13213556-T-C | 11057880-T-C | ** | ||||||
13213942-A-G | 11058266-A-G | ** | ||||||
13218643-T-C | 11062967-T-C | ** | ||||||
13571660-A-T | 11415984-A-T | ** | ||||||
13218723-T-C | 11063047-T-C | ** | ||||||
13218939-C-A | 11063263-C-A | FT191050 | ** | |||||
13321539-G-C | 11165863-G-C | ** | ||||||
13338358-T-G | 11182682-T-G | ** | ||||||
13474528-A-C | 11318852-A-C | ** | ||||||
13474543-T-G | 11318867-T-G | ** | ||||||
13909028-G-A | 11788322-G-A | ** | ||||||
13557777-A-G | 11402101-A-G | ** | ||||||
13571578-A-T | 11415902-A-T | ** | ||||||
13571584-T-G | 11415908-T-G | ** | ||||||
13571605-T-C | 11415929-T-C | ** | ||||||
13908981-T-A | 11788275-T-A | ** | ||||||
14073952-T-C | 11953246-T-C | ** | ||||||
13919630-T-C | 11798924-T-C | ** | ||||||
15140876-A-T | 13028963-A-T | ** | ||||||
14661500-A-G | 12549565-A-G | ** | ||||||
14698329-C-T | 12586395-C-T | ** | ||||||
14700807-C-A | 12588873-C-A | ** | ||||||
14721669-G-A | 12609737-G-A | ** | ||||||
14823480-T-A | 12711547-T-A | ** | ||||||
14871102-T-A | 12759172-T-A | ** | ||||||
14914697-A-T | 12802764-A-T | ** | ||||||
14986462-GA-G | 12874530-GA-G | ** | ||||||
15012532-C-A | 12900620-C-A | ** | ||||||
15012553-G-A | 12900641-G-A | ** | ||||||
15168069-C-A | 13056155-C-A | ** | ||||||
14658315-C-A | 12546380-C-A | ** | ||||||
15177559-A-T | 13065645-A-T | ** | ||||||
15189526-G-A | 13077612-G-A | ** | ||||||
15189574-C-A | 13077660-C-A | ** | ||||||
15280806-T-G | 13168905-T-G | ** | ||||||
15369554-A-T | 13257674-A-T | ** | ||||||
15369580-A-G | 13257700-A-G | ** | ||||||
15369591-A-G | 13257711-A-G | ** | ||||||
15403400-G-A | 13291520-G-A | ** | ||||||
15424569-G-T | 13312689-G-T | ** | ||||||
15475274-C-T | 13363394-C-T | ** | ||||||
15503393-G-A | 13391513-G-A | ** | ||||||
14660495-A-G | 12548560-A-G | ** | ||||||
14582243-C-T | 12470443-C-T | ** | ||||||
13938355-G-T | 11817649-G-T | ** | ||||||
14174790-A-T | 12054084-A-T | ** | ||||||
13945407-A-G | 11824701-A-G | FT5484 | ** | |||||
13958388-T-A | 11837682-T-A | ** | ||||||
14017609-C-A | 11896903-C-A | ** | ||||||
14021376-A-G | 11900670-A-G | ** | ||||||
10993334-T-C | ** | |||||||
14076033-C-G | 11955327-C-G | ** | ||||||
14077055-C-A | 11956349-C-A | ** | ||||||
14101280-T-C | 11980574-T-C | ** | ||||||
14101295-T-G | 11980589-T-G | ** | ||||||
14160228-G-T | 12039522-G-T | ** | ||||||
14174789-A-C | 12054083-A-C | ** | ||||||
14213095-C-A | 12092389-C-A | ** | ||||||
14568814-A-T | 12457014-A-T | ** | ||||||
14289442-C-T | 12168736-C-T | ** | ||||||
14289473-A-G | 12168767-A-G | ** | ||||||
14361919-T-G | 12241214-T-G | ** | ||||||
14381688-G-A | 12260984-G-A | ** | ||||||
14390011-C-A | 12269307-C-A | ** | ||||||
14392773-CTCTG-C | 12272069-CTCTG-C | ** | ||||||
14526278-C-A | 12414479-C-A | ** | ||||||
14559339-A-T | 12447540-A-T | ** | ||||||
14559409-A-T | 12447610-A-T | ** | ||||||
14562369-A-T | 12450569-A-T | ** | ||||||
14563407-C-A | 12451607-C-A | ** | ||||||
10998080-A-G | ** | |||||||
16197-C-A | ** | |||||||
10993333-A-C | ** | |||||||
10687188-C-A | ** | |||||||
9669710-A-C | 9832101-A-C | IR3_Prx | ** | |||||
9969594-C-A | 10131985-C-A | ** | ||||||
9986242-C-T | 10148633-C-T | ** | ||||||
10026630-G-C | 10189021-G-C | ** | ||||||
10057460-C-A | 10219851-C-A | ** | ||||||
10656357-C-A | ** | |||||||
10663559-C-A | ** | |||||||
10672339-C-T | ** | |||||||
10676867-A-T | ** | |||||||
10685449-C-A | ** | |||||||
10744813-C-T | ** | |||||||
9652209-C-T | 9814600-C-T | IR3_Prx | ** | |||||
10745834-A-C | ** | |||||||
10749197-C-A | ** | |||||||
10753097-C-A | ** | |||||||
10755131-G-T | ** | |||||||
10763002-A-ACTCGC | ** | |||||||
10764695-G-T | ** | |||||||
10764772-C-G | ** | |||||||
10764836-C-A | ** | |||||||
10765811-T-A | ** | |||||||
10766378-A-AT | ** | |||||||
10775218-C-A | ** | |||||||
9652215-G-T | 9814606-G-T | IR3_Prx | ** | |||||
9652176-A-C | 9814567-A-C | IR3_Prx | ** | |||||
10781957-T-A | ** | |||||||
8792953-T-C | 8924912-T-C | ** | ||||||
8078364-A-G | 8210323-A-G | ** | ||||||
8130548-T-G | 8262507-T-G | ** | ||||||
8214190-G-A | 8346149-G-A | ** | ||||||
8296903-C-A | 8428862-C-A | ** | ||||||
8669895-T-G | 8801854-T-G | ** | ||||||
8709868-A-T | 8841827-A-T | ** | ||||||
22489654-C-T | 20327768-C-T | BY225107 | DYZ19 | ** | ||||
8735644-G-T | 8867603-G-T | FT215892 | ** | |||||
8735686-C-A | 8867645-C-A | ** | ||||||
8746319-T-G | 8878278-T-G | ** | ||||||
8813385-C-A | 8945344-C-A | ** | ||||||
9622452-T-A | 9784843-T-A | IR3_Prx | ** | |||||
8817016-C-A | 8948975-C-A | ** | ||||||
8817085-T-A | 8949044-T-A | ** | ||||||
9019035-T-A | 9181426-T-A | ** | ||||||
9022938-T-G | 9185329-T-G | ** | ||||||
9030356-A-C | 9192747-A-C | ** | ||||||
9094380-C-T | 9256771-C-T | ** | ||||||
9436977-T-A | 9599368-T-A | ** | ||||||
9465232-T-A | 9627623-T-A | ** | ||||||
9482226-A-T | 9644617-A-T | ** | ||||||
9482262-T-A | 9644653-T-A | ** | ||||||
9605235-G-A | 9767626-G-A | IR3_Prx | ** | |||||
10779034-T-A | ** | |||||||
10782187-T-A | ** | |||||||
10985211-TTCCATTCCATTCCATTCCAC-T | ** | |||||||
10961145-A-T | ** | |||||||
10898570-C-T | ** | |||||||
10904235-C-T | ** | |||||||
10929181-G-A | ** | |||||||
10930188-C-G | ** | |||||||
10932273-GCATTCCATTCCTTT-G | ** | |||||||
10944697-C-G | ** | |||||||
10950026-A-C | ** | |||||||
10956434-C-A | ** | |||||||
10956808-A-C | ** | |||||||
10958786-C-A | ** | |||||||
10963184-A-C | ** | |||||||
10889751-A-G | ** | |||||||
10963216-A-TGCT | ** | |||||||
10963251-CCC-T | ** | |||||||
10965135-T-C | ** | |||||||
10967357-C-A | ** | |||||||
10971479-G-C | ** | |||||||
15558032-A-T | 13446152-A-T | ** | ||||||
10973248-T-A | ** | |||||||
10973462-A-T | ** | |||||||
10976097-A-C | ** | |||||||
10976781-C-A | ** | |||||||
10978890-C-G | ** | |||||||
10894183-C-A | ** | |||||||
10886565-C-A | ** | |||||||
10782649-C-G | ** | |||||||
10823497-T-G | ** | |||||||
10782664-C-A | ** | |||||||
10788183-T-C | ** | |||||||
10788989-C-A | ** | |||||||
10793469-T-C | ** | |||||||
10795717-T-G | ** | |||||||
10795802-T-G | ** | |||||||
10796488-T-A | ** | |||||||
10796529-T-A | ** | |||||||
10799132-C-A | ** | |||||||
10804613-C-A | ** | |||||||
10823746-C-A | ** | |||||||
10883000-T-G | ** | |||||||
10824991-A-G | ** | |||||||
10838684-C-T | ** | |||||||
10841716-C-A | ** | |||||||
10851647-C-A | ** | |||||||
10862249-C-A | ** | |||||||
10864178-T-A | ** | |||||||
10864179-C-A | ** | |||||||
10873565-C-G | ** | |||||||
10873583-T-G | ** | |||||||
10875392-C-A | ** | |||||||
10882483-G-T | ** | |||||||
10971482-A-C | ** | |||||||
15761055-G-A | 13649175-G-A | ** | ||||||
15558053-G-C | 13446173-G-C | ** | ||||||
21945179-C-A | 19783293-C-A | ** | ||||||
21323500-A-G | 19161614-A-G | ** | ||||||
21464578-A-G | 19302692-A-G | ** | ||||||
21524359-G-T | 19362473-G-T | ** | ||||||
21747828-C-G | 19585942-C-G | ** | ||||||
21747906-C-T | 19586020-C-T | ** | ||||||
21747919-A-C | 19586033-A-C | ** | ||||||
21836620-T-A | 19674734-T-A | ** | ||||||
21861906-G-T | 19700020-G-T | ** | ||||||
21915747-C-A | 19753861-C-A | ** | ||||||
21915774-A-T | 19753888-A-T | ** | ||||||
21963950-G-T | 19802064-G-T | ** | ||||||
21238219-CA-C | 19076333-CA-C | ** | ||||||
22128747-T-A | 19966861-T-A | ** | ||||||
22164504-C-G | 20002618-C-G | ** | ||||||
22345990-A-C | 20184104-A-C | DYZ19 | ** | |||||
22489645-G-C | 20327759-G-C | DYZ19 | ** | |||||
22602326-AT-A | 20440440-AT-A | ** | ||||||
22650985-G-T | 20489099-G-T | ** | ||||||
22659400-G-A | 20497514-G-A | ** | ||||||
22715111-T-A | 20553225-T-A | ** | ||||||
22809893-T-C | 20648007-T-C | ** | ||||||
22974214-C-A | 20812328-C-A | ** | ||||||
22990275-C-A | 20828389-C-A | ** | ||||||
21244101-C-T | 19082215-C-T | ** | ||||||
21196461-C-A | 19034575-C-A | ** | ||||||
23045917-A-C | 20884031-A-C | ** | ||||||
19563149-C-G | 17451269-C-G | ** | ||||||
19304175-G-A | 17192295-G-A | ** | ||||||
19370206-C-A | 17258326-C-A | ** | ||||||
19410181-G-A | 17298301-G-A | ** | ||||||
19416527-A-T | 17304647-A-T | ** | ||||||
19416572-A-T | 17304692-A-T | ** | ||||||
19416578-A-G | 17304698-A-G | ** | ||||||
19448286-G-T | 17336406-G-T | ** | ||||||
19463830-T-C | 17351950-T-C | ** | ||||||
19486913-G-A | 17375033-G-A | ** | ||||||
19537941-G-GA | 17426061-G-GA | ** | ||||||
19594886-T-C | 17483006-T-C | P5_Prx | ** | |||||
21185166-G-C | 19023280-G-C | ** | ||||||
19719243-T-G | 17607363-T-G | P5_Prx | ** | |||||
19792863-C-G | 17680983-C-G | P5_Prx | ** | |||||
19792997-T-TC | 17681117-T-TC | P5_Prx | ** | |||||
20404383-T-A | 18242497-T-A | P5_Dst | ** | |||||
20434203-T-TG | 18272317-T-TG | P5_Dst | ** | |||||
20666377-T-A | 18504491-T-A | P4_Prx | ** | |||||
20825692-T-C | 18663806-T-C | P4_Gap | ** | |||||
20961997-G-T | 18800111-G-T | P4_Dst | ** | |||||
20993613-A-G | 18831727-A-G | P4_Dst | ** | |||||
21029482-A-G | 18867596-A-G | P4_Dst | ** | |||||
21152420-C-A | 18990534-C-A | ** | ||||||
23019649-A-T | 20857763-A-T | ** | ||||||
23045929-G-C | 20884043-G-C | ** | ||||||
19304165-G-C | 17192285-G-C | ** | ||||||
28505155-T-A | 26359008-T-A | ** | ||||||
27887015-C-A | 25740868-C-A | P1_Y2 | ** | |||||
27887028-T-A | 25740881-T-A | P1_Y2 | ** | |||||
27887033-A-T | 25740886-A-T | P1_Y2 | ** | |||||
28461567-T-C | 26315420-T-C | ** | ||||||
28461584-A-T | 26315437-A-T | ** | ||||||
28462056-T-G | 26315909-T-G | ** | ||||||
28462094-A-C | 26315947-A-C | ** | ||||||
28463395-A-G | 26317248-A-G | ** | ||||||
28498710-C-A | 26352563-C-A | ** | ||||||
28505144-T-C | 26358997-T-C | ** | ||||||
28507299-T-C | 26361152-T-C | ** | ||||||
26376495-G-A | 24230348-G-A | P1_Y1 | ** | |||||
28560163-A-G | 26414016-A-G | ** | ||||||
28594286-G-A | 26448139-G-A | ** | ||||||
28597138-T-A | 26450991-T-A | ** | ||||||
28605947-C-A | 26459800-C-A | ** | ||||||
28611027-T-C | 26464880-T-C | ** | ||||||
28621968-A-G | 26475821-A-G | ** | ||||||
28687927-C-G | 26541780-C-G | ** | ||||||
28744765-C-A | 26598618-C-A | ** | ||||||
28779710-A-G | 26633563-A-G | ** | ||||||
56823335-A-G | ** | |||||||
56843545-A-C | ** | |||||||
26379291-T-G | 24233144-T-G | P1_Y1 | ** | |||||
26248224-A-T | 24102077-A-T | P1_Y1 | ** | |||||
23046038-A-G | 20884152-A-G | ** | ||||||
23438858-A-C | 21276972-A-C | ** | ||||||
23046090-C-A | 20884204-C-A | ** | ||||||
23048317-T-A | 20886431-T-A | ** | ||||||
23050397-C-A | 20888511-C-A | ** | ||||||
23142523-C-CT | 20980637-C-CT | ** | ||||||
23144230-G-C | 20982344-G-C | ** | ||||||
23204907-A-G | 21043021-A-G | ** | ||||||
23311194-T-TCTTTCTTA | 21149308-T-TCTTTCTTA | ** | ||||||
23341943-T-G | 21180057-T-G | ** | ||||||
23345727-G-C | 21183841-G-C | ** | ||||||
23401428-C-A | 21239542-C-A | ** | ||||||
23438979-C-G | 21277093-C-G | ** | ||||||
26047336-T-A | 23901189-T-A | P1_Y1 | ** | |||||
23823510-A-T | 21661624-A-T | ** | ||||||
23848128-T-A | 21686242-T-A | ** | ||||||
24244726-C-A | 22098579-C-A | P3_b1 | ** | |||||
24381377-G-T | 22235230-G-T | ** | ||||||
24402004-C-T | 22255857-C-T | ** | ||||||
24624539-G-GTT | 22478392-G-GTT | P3_t2 | ** | |||||
25174512-G-A | 23028365-G-A | g1 | ** | |||||
25865655-A-AC | 23719508-A-AC | P1_Y1 | ** | |||||
25866359-G-A | 23720212-G-A | P1_Y1 | ** | |||||
25892543-T-G | 23746396-T-G | P1_Y1 | ** | |||||
25892552-A-T | 23746405-A-T | P1_Y1 | ** | |||||
19304172-G-A | 17192292-G-A | ** | ||||||
19304162-C-G | 17192282-C-G | ** | ||||||
15558059-G-T | 13446179-G-T | ** | ||||||
16766403-C-G | 14654523-C-G | ** | ||||||
16430448-A-G | 14318568-A-G | ** | ||||||
16430556-G-C | 14318676-G-C | ** | ||||||
16464574-A-G | 14352694-A-G | ** | ||||||
16464638-G-T | 14352758-G-T | ** | ||||||
16464705-A-C | 14352825-A-C | ** | ||||||
16474818-C-A | 14362938-C-A | ** | ||||||
16533285-T-G | 14421405-T-G | ** | ||||||
16558547-T-C | 14446667-T-C | ** | ||||||
16619889-G-A | 14508009-G-A | ** | ||||||
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10937569-C-A | ** | |||||||
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10787249-C-A | ** | |||||||
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10813213-C-A | ** | |||||||
7664407-C-A | 7796366-C-A | ** | ||||||
6576766-C-A | 6708725-C-A | ** | ||||||
3640753-G-C | 3772712-G-C | ** | ||||||
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15012521-C-T | 12900609-C-T | ** | ||||||
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13468166-C-T | 11312490-C-T | ** | ||||||
13468172-C-T | 11312496-C-T | ** | ||||||
22914674-CAAAAAAAAAAAA-C | 20752788-CAAAAAAAAAAAA-C | 27×A | ** | |||||
15399468-C-A | 13287588-C-A | ** | ||||||
10870578-G-T | ** | |||||||
9465262-C-A | 9627653-C-A | ** | ||||||
7438096-A-T | 7570055-A-T | ** | ||||||
10837902-G-T | ** | |||||||
9605325-G-GTT | 9767716-G-GTT | IR3_Prx | ** | |||||
15728847-T-C | 13616967-T-C | ** | ||||||
11030285-C-G | ** | |||||||
16427219-C-A | 14315339-C-A | ** | ||||||
10794836-C-T | FT178486 | ** | ||||||
13938584-G-T | 11817878-G-T | ** | ||||||
16464665-G-A | 14352785-G-A | ** | ||||||
19302748-G-T | 17190868-G-T | ** | ||||||
22124411-C-A | 19962525-C-A | ** | ||||||
10959827-T-C | ** | |||||||
5204513-C-T | 5336472-C-T | ** | ||||||
10888327-C-A | ** | |||||||
7282443-C-A | 7414402-C-A | ** | ||||||
28621946-G-T | 26475799-G-T | ** | ||||||
17552031-C-A | 15440151-C-A | ** | ||||||
15477290-T-C | 13365410-T-C | ** | ||||||
11034928-C-T | ** | |||||||
10942394-A-C | ** | |||||||
10773029-C-A | ** | |||||||
17871690-G-C | 15759810-G-C | ** | ||||||
10896395-C-A | ** | |||||||
10835376-A-C | ** | |||||||
6698887-C-A | 6830846-C-A | ** | ||||||
14392773-C-T | 12272069-C-T | ** | ||||||
23204945-C-A | 21043059-C-A | ** | ||||||
10673576-C-A | ** | |||||||
10749956-C-A | ** | |||||||
15987339-C-A | 13875459-C-A | ** | ||||||
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4957728-C-A | 5089687-C-A | ** | ||||||
18915266-C-A | 16803386-C-A | ** | ||||||
7753555-C-A | 7885514-C-A | ** | ||||||
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10846894-T-C | ** | |||||||
9231915-T-C | 9394306-T-C | ** | ||||||
10685107-C-A | ** | |||||||
18859155-C-A | 16747275-C-A | ** | ||||||
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13932608-C-A | 11811902-C-A | ** | ||||||
9986250-T-A | 10148641-T-A | ** | ||||||
24405161-C-A | 22259014-C-A | ** | ||||||
21836573-T-A | 19674687-T-A | ** | ||||||
14069104-C-A | 11948398-C-A | ** | ||||||
10750271-G-C | ** | |||||||
3436995-T-C | 3568954-T-C | ** | ||||||
10967331-C-A | ** | |||||||
10937073-G-T | ** | |||||||
11013878-A-T | ** | |||||||
10795613-C-A | ** | |||||||
8734925-C-A | 8866884-C-A | ** | ||||||
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14012130-C-A | 11891424-C-A | ** | ||||||
18692720-C-A | 16580840-C-A | ** | ||||||
22715173-T-G | 20553287-T-G | ** | ||||||
56838737-G-T | ** | |||||||
16652021-G-C | 14540141-G-C | ** | ||||||
14788059-C-A | 12676130-C-A | ** | ||||||
14149250-C-A | 12028544-C-A | ** | ||||||
17346306-C-A | 15234426-C-A | ** | ||||||
7578995-C-A | 7710954-C-A | ** | ||||||
6445120-C-A | 6577079-C-A | ** | ||||||
8748615-C-A | 8880574-C-A | ** | ||||||
14717649-G-T | 12605717-G-T | ** | ||||||
28778939-C-A | 26632792-C-A | ** | ||||||
7163029-C-A | 7294988-C-A | ** | ||||||
28703993-C-A | 26557846-C-A | ** | ||||||
7164209-T-C | 7296168-T-C | ** | ||||||
14483423-C-A | 12362692-C-A | ** | ||||||
10838773-G-T | ** | |||||||
10894465-G-C | ** | |||||||
7894587-C-A | 8026546-C-A | ** | ||||||
16117490-T-C | 14005610-T-C | P8_Prx | ** | |||||
7021858-G-A | 7153817-G-A | ** | ||||||
10791435-C-A | ** | |||||||
11034616-C-A | ** | |||||||
11037122-C-A | ** | |||||||
7250390-C-A | 7382349-C-A | ** | ||||||
10793519-T-C | ** | |||||||
10793521-T-C | ** | |||||||
14270511-C-A | 12149805-C-A | ** | ||||||
10963177-C-G | ** | |||||||
7723758-C-A | 7855717-C-A | ** | ||||||
8658287-C-A | 8790246-C-A | ** | ||||||
16354862-G-T | 14242982-G-T | ** | ||||||
14568256-C-A | 12456456-C-A | ** | ||||||
8690498-C-A | 8822457-C-A | FT215872 | ** | |||||
10767714-T-A | ** | |||||||
13227972-C-A | 11072296-C-A | ** | ||||||
9900333-C-A | 10062724-C-A | ** | ||||||
10762990-C-T | ** | |||||||
5755172-C-A | 5887131-C-A | ** | ||||||
22204977-G-T | 20043091-G-T | ** | ||||||
13988920-C-A | 11868214-C-A | ** | ||||||
11034809-C-CATTCCACTCCTTTCA | ** | |||||||
7270314-C-T | 7402273-C-T | ** | ||||||
11034854-C-T | ** | |||||||
11034860-ATGACT-A | ** | |||||||
11034868-C-G | ** | |||||||
11034875-C-T | ** | |||||||
11034876-A-G | ** | |||||||
7040206-G-T | 7172165-G-T | ** | ||||||
3271824-C-A | 3403783-C-A | ** | ||||||
10856377-G-T | ** | |||||||
15412787-A-T | 13300907-A-T | ** | ||||||
7437435-C-A | 7569394-C-A | ** | ||||||
11029472-C-A | ** | |||||||
10947599-C-A | ** | |||||||
11005968-T-A | ** | |||||||
3123180-G-C | 3255139-G-C | ** | ||||||
15012591-C-T | 12900679-C-T | ** | ||||||
22849511-TG-T | 20687625-TG-T | ** | ||||||
9859165-C-G | 10021556-C-G | Z20909 | ** | |||||
13445923-C-A | 11290247-C-A | ** | ||||||
59007611-T-A | 56861464-T-A | ** | ||||||
3640805-A-T | 3772764-A-T | ** | ||||||
17946991-C-A | 15835111-C-A | ** | ||||||
15012570-C-T | 12900658-C-T | ** | ||||||
15012583-T-C | 12900671-T-C | ** | ||||||
15315448-C-G | 13203553-C-G | ** | ||||||
10672775-C-A | ** | |||||||
26415668-C-A | 24269521-C-A | P1_Y1 | ** | |||||
14041555-C-A | 11920849-C-A | ** | ||||||
21133353-C-A | 18971467-C-A | ** | ||||||
16981425-C-A | 14869545-C-A | ** | ||||||
15012528-C-G | 12900616-C-G | ** | ||||||
10926719-A-T | ** | |||||||
4069532-T-G | 4201491-T-G | ** | ||||||
27829242-G-T | 25683095-G-T | P1_Y2 | ** | |||||
25709419-A-G | 23563272-A-G | P1_b3 | ** | |||||
14270539-C-A | 12149833-C-A | ** | ||||||
26376492-T-C | 24230345-T-C | P1_Y1 | ** | |||||
13594528-A-C | 11438852-A-C | ** | ||||||
10663769-T-C | ** | |||||||
4788776-C-A | 4920735-C-A | ** | ||||||
10986588-T-A | ** | |||||||
17500758-G-T | 15388878-G-T | ** | ||||||
17883680-C-A | 15771800-C-A | ** | ||||||
11030301-A-T | ** | |||||||
15982168-GAA-G | 13870288-GAA-G | 15×A | ** | |||||
10940276-A-C | ** | |||||||
24405036-C-A | 22258889-C-A | ** | ||||||
7082759-C-A | 7214718-C-A | ** | ||||||
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5937161-C-A | 6069120-C-A | ** | ||||||
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20888529-G-T | 18726643-G-T | P4_Dst | ** | |||||
11023029-T-C | ** | |||||||
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19271581-C-G | 17159701-C-G | ** | ||||||
21980000-T-C | 19818114-T-C | ** | ||||||
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15631938-C-A | 13520058-C-A | ** | ||||||
24381389-C-A | 22235242-C-A | ** | ||||||
10796681-C-A | ** | |||||||
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4925958-G-T | 5057917-G-T | ** | ||||||
21747856-C-G | 19585970-C-G | ** | ||||||
10940260-A-C | ** | |||||||
4863325-T-C | 4995284-T-C | ** | ||||||
11029745-C-T | ** | |||||||
4160412-C-A | 4292371-C-A | ** | ||||||
19719329-A-AT | 17607449-A-AT | P5_Prx | ** | |||||
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26228652-T-A | 24082505-T-A | P1_Y1 | ** | |||||
10835007-G-T | ** | |||||||
19226057-C-A | 17114177-C-A | ** | ||||||
16427243-C-A | 14315363-C-A | ** | ||||||
4235676-C-A | 4367635-C-A | ** | ||||||
10935466-C-A | ** | |||||||
10965116-A-C | ** | |||||||
6814624-C-T | 6946583-C-T | A10698 | ** | |||||
6791725-C-A | 6923684-C-A | ** | ||||||
6816734-T-A | 6948693-T-A | ** | ||||||
21713438-T-C | 19551552-T-C | 16×A | ** | |||||
10973247-T-G | FT294408 | ** | ||||||
11013941-T-C | ** | |||||||
17994848-T-A | 15882968-T-A | P7_Prx | ** | |||||
6714685-C-A | 6846644-C-A | ** | ||||||
14355637-C-A | 12234932-C-A | ** | ||||||
26376498-T-A | 24230351-T-A | P1_Y1 | ** | |||||
16220660-C-A | 14108780-C-A | ** | ||||||
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19216390-C-A | 17104510-C-A | ** | ||||||
17994850-T-A | 15882970-T-A | P7_Prx | ** | |||||
13328616-C-A | 11172940-C-A | ** | ||||||
23204982-C-A | 21043096-C-A | ** | ||||||
17653993-C-A | 15542113-C-A | ** | ||||||
5494688-T-G | 5626647-T-G | ** | ||||||
5186942-G-T | 5318901-G-T | ** | ||||||
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5421214-T-C | 5553173-T-C | ** | ||||||
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5066104-G-T | 5198063-G-T | ** | ||||||
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5587114-T-C | 5719073-T-C | ** | ||||||
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5626218-A-C | 5758177-A-C | ** | ||||||
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4957056-T-A | 5089015-T-A | ** | ||||||
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4439342-G-C | 4571301-G-C | ** | ||||||
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4229267-C-T | 4361226-C-T | ** | ||||||
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4256922-T-G | 4388881-T-G | ** | ||||||
4256988-T-G | 4388947-T-G | ** | ||||||
4282503-C-A | 4414462-C-A | ** | ||||||
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4403791-C-A | 4535750-C-A | ** | ||||||
4426915-G-T | 4558874-G-T | ** | ||||||
4439281-G-T | 4571240-G-T | ** | ||||||
4439392-T-A | 4571351-T-A | ** | ||||||
4950038-C-T | 5081997-C-T | ** | ||||||
4444061-A-T | 4576020-A-T | ** | ||||||
4444072-A-C | 4576031-A-C | ** | ||||||
14226444-C-A | 12105738-C-A | ** | ||||||
4504793-T-G | 4636752-T-G | ** | ||||||
4509439-G-A | 4641398-G-A | ** | ||||||
4673541-C-A | 4805500-C-A | ** | ||||||
4764958-G-T | 4896917-G-T | ** | ||||||
4884020-C-A | 5015979-C-A | ** | ||||||
4920007-A-T | 5051966-A-T | ** | ||||||
4920010-T-C | 5051969-T-C | ** | ||||||
4950011-G-T | 5081970-G-T | ** | ||||||
5864570-TA-T | 5996529-TA-T | ** | ||||||
5987439-G-T | 6119398-G-T | ** | ||||||
4178893-C-G | 4310852-C-G | ** | ||||||
7254974-C-T | 7386933-C-T | ** | ||||||
7162460-A-T | 7294419-A-T | ** | ||||||
7185524-T-A | 7317483-T-A | ** | ||||||
7217819-G-T | 7349778-G-T | ** | ||||||
7218291-T-G | 7350250-T-G | ** | ||||||
7223985-C-A | 7355944-C-A | ** | ||||||
7224027-T-C | 7355986-T-C | ** | ||||||
7231171-G-C | 7363130-G-C | ** | ||||||
7231397-T-G | 7363356-T-G | ** | ||||||
7238247-C-A | 7370206-C-A | ** | ||||||
7253627-C-T | 7385586-C-T | ** | ||||||
7255136-T-C | 7387095-T-C | ** | ||||||
7063856-G-T | 7195815-G-T | ** | ||||||
7320140-T-C | 7452099-T-C | ** | ||||||
7384736-C-T | 7516695-C-T | ** | ||||||
7420580-A-T | 7552539-A-T | ** | ||||||
7428289-G-T | 7560248-G-T | ** | ||||||
7433522-A-G | 7565481-A-G | ** | ||||||
7438119-G-T | 7570078-G-T | ** | ||||||
7471294-C-A | 7603253-C-A | IR1_L | ** | |||||
7578815-G-C | 7710774-G-C | ** | ||||||
7650510-C-A | 7782469-C-A | ** | ||||||
7665392-T-A | 7797351-T-A | ** | ||||||
7753520-G-A | 7885479-G-A | ** | ||||||
7078513-A-T | 7210472-A-T | ** | ||||||
7031054-T-A | 7163013-T-A | ** | ||||||
5999575-C-G | 6131534-C-G | ** | ||||||
6310732-C-A | 6442691-C-A | IR3_Dst | ** | |||||
6054796-G-T | 6186755-G-T | ** | ||||||
6092953-T-TC | 6224912-T-TC | ** | ||||||
6092974-T-TC | 6224933-T-TC | ** | ||||||
6092994-G-A | 6224953-G-A | ** | ||||||
6093039-T-C | 6224998-T-C | ** | ||||||
6113687-C-A | 6245646-C-A | ** | ||||||
6206334-A-T | 6338293-A-T | IR3_Dst | ** | |||||
6226177-A-C | 6358136-A-C | IR3_Dst | ** | |||||
6289306-C-A | 6421265-C-A | IR3_Dst | ** | |||||
6289339-G-T | 6421298-G-T | IR3_Dst | ** | |||||
6314843-C-G | 6446802-C-G | IR3_Dst | ** | |||||
6977533-A-T | 7109492-A-T | ** | ||||||
6314862-C-A | 6446821-C-A | IR3_Dst | ** | |||||
6314945-C-A | 6446904-C-A | IR3_Dst | ** | |||||
6368680-G-A | 6500639-G-A | ** | ||||||
6479245-A-G | 6611204-A-G | ** | ||||||
6504888-G-T | 6636847-G-T | ** | ||||||
6637170-C-T | 6769129-C-T | ** | ||||||
6663337-G-C | 6795296-G-C | ** | ||||||
6663359-G-A | 6795318-G-A | ** | ||||||
6773749-C-G | 6905708-C-G | ** | ||||||
6806950-G-T | 6938909-G-T | ** | ||||||
6916276-A-G | 7048235-A-G | ** | ||||||
4225990-G-T | 4357949-G-T | ** | ||||||
4447649-C-T | 4579608-C-T | ** | ||||||
4087891-A-C | 4219850-A-C | ** | ||||||
10828986-T-C | ** | |||||||
19416539-A-C | 17304659-A-C | ** | ||||||
16432739-C-A | 14320859-C-A | ** | ||||||
5859086-C-A | 5991045-C-A | ** | ||||||
11018232-T-G | ** | |||||||
13571649-A-C | 11415973-A-C | ** | ||||||
14582166-C-A | 12470366-C-A | ** | ||||||
22171272-G-T | 20009386-G-T | ** | ||||||
10929532-C-A | ** | |||||||
8807460-C-A | 8939419-C-A | ** | ||||||
15288868-T-C | 13176967-T-C | ** | ||||||
15452316-C-A | 13340436-C-A | ** | ||||||
10866887-AACTCC-A | ** | |||||||
19203918-C-A | 17092038-C-A | ** | ||||||
22865329-C-A | 20703443-C-A | ** | ||||||
7306669-A-G | 7438628-A-G | ** | ||||||
23625658-GAAAC-G | 21463772-GAAAC-G | 4×AAAC | ** | |||||
28549840-T-G | 26403693-T-G | ** | ||||||
14888003-C-A | 12776069-C-A | ** | ||||||
22775443-C-A | 20613557-C-A | ** | ||||||
2758386-G-A | 2890345-G-A | ** | ||||||
2762722-A-T | 2894681-A-T | ** | ||||||
14871373-C-A | 12759443-C-A | ** | ||||||
15779948-G-T | 13668068-G-T | ** | ||||||
2793059-G-A | 2925018-G-A | ** | ||||||
3116405-C-A | 3248364-C-A | ** | ||||||
10963240-T-C | ** | |||||||
15742946-C-A | 13631066-C-A | ** | ||||||
9928276-C-A | 10090667-C-A | ** | ||||||
10829493-C-A | ** | |||||||
10824998-C-T | ** | |||||||
8698713-C-A | 8830672-C-A | ** | ||||||
27887017-AAC-A | 25740870-AAC-A | P1_Y2 | ** | |||||
10937101-G-T | ** | |||||||
7319163-T-C | 7451122-T-C | ** | ||||||
7448442-G-T | 7580401-G-T | IR1_L | ** | |||||
10973749-C-A | ** | |||||||
17923707-G-A | 15811827-G-A | ** | ||||||
14785533-T-C | 12673603-T-C | ** | ||||||
3696953-G-T | 3828912-G-T | ** | ||||||
16676690-C-A | 14564810-C-A | ** | ||||||
56840163-G-T | ** | |||||||
23137450-C-A | 20975564-C-A | ** | ||||||
8100552-G-A | 8232511-G-A | ** | ||||||
10883518-TTTCCA-T | ** | |||||||
8735653-C-A | 8867612-C-A | ** | ||||||
15700439-C-A | 13588559-C-A | ** | ||||||
2773831-C-A | 2905790-C-A | ** | ||||||
19007765-C-A | 16895885-C-A | ** | ||||||
2852871-G-A | 2984830-G-A | ** | ||||||
3516217-G-T | 3648176-G-T | ** | ||||||
3271619-T-A | 3403578-T-A | ** | ||||||
3271625-T-A | 3403584-T-A | ** | ||||||
3271633-G-A | 3403592-G-A | ** | ||||||
3271637-C-CTTTG | 3403596-C-CTTTG | ** | ||||||
2964721-C-A | 3096680-C-A | ** | ||||||
3271786-C-T | 3403745-C-T | ** | ||||||
3271820-T-C | 3403779-T-C | ** | ||||||
3283704-C-A | 3415663-C-A | ** | ||||||
3492126-T-C | 3624085-T-C | ** | ||||||
3604209-A-T | 3736168-A-T | ** | ||||||
3123160-T-C | 3255119-T-C | ** | ||||||
3640698-T-A | 3772657-T-A | ** | ||||||
3640709-C-A | 3772668-C-A | ** | ||||||
3640715-T-A | 3772674-T-A | ** | ||||||
3651312-C-T | 3783271-C-T | ** | ||||||
3666598-C-A | 3798557-C-A | ** | ||||||
3833367-C-A | 3965326-C-A | ** | ||||||
3846626-T-A | 3978585-T-A | ** | ||||||
3924893-T-A | 4056852-T-A | ** | ||||||
4069523-T-G | 4201482-T-G | ** | ||||||
3135246-A-G | 3267205-A-G | ** | ||||||
3271641-TGAC-T | 3403600-TGAC-T | ** | ||||||
2967059-T-C | 3099018-T-C | ** | ||||||
3117626-G-T | 3249585-G-T | ** | ||||||
2967009-A-C | 3098968-A-C | ** | ||||||
3098123-C-A | 3230082-C-A | ** | ||||||
3123089-G-C | 3255048-G-C | ** | ||||||
10942856-C-A | *** | |||||||
3678580-C-A | 3810539-C-A | *** | ||||||
10885162-CATTC-C,CATTT | *** | |||||||
15604346-C-A | 13492466-C-A | *** | ||||||
10983768-C-T | *** | |||||||
4262267-C-A | 4394226-C-A | *** | ||||||
22893304-CCTTTCTTT-C,CCTTT | 20731418-CCTTTCTTT-C,CCTTT | 17×CTTT | *** | |||||
18740713-C-A | 16628833-C-A | *** | ||||||
23068131-C-A | 20906245-C-A | *** | ||||||
10840623-A-G | *** | |||||||
8901408-T-C | 9033367-T-C | *** | ||||||
10992578-A-C | *** | |||||||
17584326-G-A | 15472446-G-A | *** | ||||||
10673942-GCACC-G,GCACT | *** | |||||||
7166660-A-T | 7298619-A-T | *** | ||||||
27521873-A-AAAT | 25375726-A-AAAT | P1_Y2 | *** | |||||
10935509-CTCCAT-C,CTCCAC | *** | |||||||
20842620-T-C | 18680734-T-C | P4_Dst | *** | |||||
58996599-G-T | 56850452-G-T | *** | ||||||
56844709-T-C | *** | |||||||
56850457-A-C | *** | |||||||
56841150-C-A | *** | |||||||
16478198-G-A | 14366318-G-A | 16×A | *** | |||||
18190533-A-G | 16078653-A-G | *** | ||||||
15092159-C-A | 12980248-C-A | *** | ||||||
10983330-C-T | *** | |||||||
8235434-T-C | 8367393-T-C | *** | ||||||
10887418-C-A | *** | |||||||
2855284-G-T | 2987243-G-T | *** | ||||||
10992579-T-C | *** | |||||||
58980790-C-T | 56834643-C-T | *** | ||||||
14096618-TAA-T,TA | 11975912-TAA-T,TA | 17×A | *** | |||||
10977175-T-C | *** | |||||||
28558450-C-G | 26412303-C-G | *** | ||||||
23421022-G-T | 21259136-G-T | *** | ||||||
9387350-G-A | 9549741-G-A | BY79081 | *** | |||||
10763052-C-A,G | *** | |||||||
11025196-C-A | *** | |||||||
17169754-T-A | 15057874-T-A | *** | ||||||
21840929-C-A | 19679043-C-A | *** | ||||||
19393417-G-A | 17281537-G-A | *** | ||||||
9859186-C-A | 10021577-C-A | *** | ||||||
10778272-C-A | *** | |||||||
10753373-C-A | *** | |||||||
10969167-C-A | FT183149 | *** | ||||||
19463051-T-C | 17351171-T-C | *** | ||||||
10887409-A-G | *** | |||||||
23572758-C-A | 21410872-C-A | *** | ||||||
13644862-C-A | 11489186-C-A | *** | ||||||
10755358-A-G,T | *** | |||||||
22068536-T-C | 19906650-T-C | *** | ||||||
21985596-C-A | 19823710-C-A | *** | ||||||
10895803-TTCCGTTCCTC-T,TTCAGTTCCAC | *** | |||||||
21960459-T-C | 19798573-T-C | *** | ||||||
10992584-T-C | *** | |||||||
10887428-CAATCT-C | *** | |||||||
21960204-C-A | 19798318-C-A | *** | ||||||
5358594-C-A | 5490553-C-A | *** | ||||||
23096673-C-A | 20934787-C-A | *** | ||||||
56850444-T-C | *** | |||||||
10763045-A-G,T | *** | |||||||
13468214-T-G | 11312538-T-G | *** | ||||||
14389829-C-A | 12269125-C-A | *** | ||||||
16679191-C-A | 14567311-C-A | *** | ||||||
16653055-T-C | 14541175-T-C | *** | ||||||
15616487-C-A | 13504607-C-A | *** | ||||||
13468198-C-G | 11312522-C-G | *** | ||||||
9830443-A-G | 9992834-A-G | *** | ||||||
5842376-G-A | 5974335-G-A | *** | ||||||
15842578-A-T | 13730698-A-T | *** | ||||||
3627495-C-A | 3759454-C-A | *** | ||||||
13958702-G-A | 11837996-G-A | *** | ||||||
10694130-C-A | *** | |||||||
4108159-C-A | 4240118-C-A | *** | ||||||
22962437-C-T | 20800551-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 179218 | 9748217 | 7899743 | 7782000 |
Used in age calculations | 9748217 | 7899743 | 7782000 |
Counts of SNPs | 8 | 7 |
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