Wangermez
BigY2: E4198MDKA Birth: Belgium
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 E4198 |
---|---|---|---|---|---|---|---|---|
6329988-A-T | 6461947-A-T | IR3_Dst | A* | |||||
24286126-T-C | 22139979-T-C | P3_t1 | A* | |||||
25953204-A-G | 23807057-A-G | P1_Y1 | A* | |||||
6695549-T-C | 6827508-T-C | BY60757 | Y | Y | + | |||
8467231-T-A | 8599190-T-A | BY73063 | Y | Y | + | |||
9460855-C-G | 9623246-C-G | BY79561 | Y | Y | + | |||
15783990-G-C | 13672110-G-C | BY104092 | Y | Y | + | |||
21994617-C-T | 19832731-C-T | BY136945 | Y | Y | + | |||
24457160-T-C | 22311013-T-C | BY150090 | Y | + | ||||
19690217-T-A | 17578337-T-A | CTS4466/S1136 | Z16249 FGC11153 | P5_Prx | ** | |||
7918392-C-A | 8050351-C-A | PF6973 | ** | |||||
7311383-TTTCC-T | 7443342-TTTCC-T | 6×TTCC | ** | |||||
13566974-C-T | 11411298-C-T | 9×AT | ** | |||||
13898759-T-G | 11778053-T-G | BY49459 | ** | |||||
21919403-TC-T | 19757517-TC-T | ** | ||||||
13883650-C-A | 11762944-C-A | FT311420 | ** | |||||
14007533-T-C | 11886827-T-C | L19 | CTS1655 M5118 | ** | ||||
14560733-G-A | 12448934-G-A | CTS2912 | ** | |||||
16084233-C-A | 13972353-C-A | Z10720 | ** | |||||
17276889-T-A | 15165009-T-A | 10×A | ** | |||||
15450073-C-T | 13338193-C-T | 15×T | ** | |||||
13487688-C-A | 11332012-C-A | ** | ||||||
10799637-C-A | ** | |||||||
10939007-A-T | ** | |||||||
10799622-T-A | ** | |||||||
18186079-C-A | 16074199-C-A | ** | ||||||
4133900-C-A | 4265859-C-A | ** | ||||||
11026929-C-T | ** | |||||||
22076223-C-A | 19914337-C-A | ** | ||||||
15732933-C-A | 13621053-C-A | ** | ||||||
10760377-T-C | ** | |||||||
10850611-A-G | ** | |||||||
10850621-T-A | ** | |||||||
10850622-A-C | ** | |||||||
21614729-TAA-T | 19452843-TAA-T | 11×A | ** | |||||
10745400-T-C | ** | |||||||
10745401-ATTCCT-A | ** | |||||||
14949127-C-A | 12837201-C-A | ** | ||||||
17370896-C-A | 15259016-C-A | ** | ||||||
22113626-C-A | 19951740-C-A | ** | ||||||
10799606-A-AGTCCT | ** | |||||||
10799629-C-CAATTCCATTT | ** | |||||||
17498982-C-A | 15387102-C-A | ** | ||||||
2845811-G-A | 2977770-G-A | ** | ||||||
21556951-TA-T | 19395065-TA-T | ** | ||||||
14768295-C-A | 12656364-C-A | ** | ||||||
11036107-T-A | ** | |||||||
11036118-T-A | ** | |||||||
11036132-C-CTCCAA | ** | |||||||
11036141-AT-A | ** | |||||||
11036147-C-CCTAAAA | ** | |||||||
11036152-C-A | ** | |||||||
3550756-A-C | 3682715-A-C | FT56840 | ** | |||||
25333909-C-A | 23187762-C-A | P2_r1 | ** | |||||
21457682-G-T | 19295796-G-T | ** | ||||||
10657631-C-A | ** | |||||||
10657637-A-C | ** | |||||||
10657639-G-C | ** | |||||||
13855528-A-ATGATG | 11734822-A-ATGATG | ** | ||||||
20888613-C-A | 18726727-C-A | P4_Dst | ** | |||||
10798311-AATTCCATTCCATTCC-A | ** | |||||||
10973907-C-A | ** | |||||||
28516491-C-A | 26370344-C-A | ** | ||||||
10846806-C-A | ** | |||||||
10759185-T-C | ** | |||||||
20888608-T-A | 18726722-T-A | P4_Dst | ** | |||||
10899129-A-T | ** | |||||||
10899140-C-CA | ** | |||||||
10846811-C-G | ** | |||||||
18792625-C-A | 16680745-C-A | ** | ||||||
19868146-T-G | 17756266-T-G | P5_Prx | ** | |||||
18130479-C-A | 16018599-C-A | ** | ||||||
10872151-C-A | ** | |||||||
19465782-C-A | 17353902-C-A | ** | ||||||
14080035-GATATAT-G | 11959329-GATATAT-G | 29×AT | ** | |||||
14593569-C-A | 12481769-C-A | ** | ||||||
20425931-G-T | 18264045-G-T | P5_Dst | ** | |||||
4229270-G-T | 4361229-G-T | ** | ||||||
15916412-C-A | 13804532-C-A | ** | ||||||
6829-A-C | ** | |||||||
10745370-C-T | ** | |||||||
10745377-T-G | ** | |||||||
10745389-C-A | ** | |||||||
10995828-C-CCATTAAATTCCACTG | ** | |||||||
10896146-C-A | ** | |||||||
10759200-C-A | ** | |||||||
17481308-C-A | 15369428-C-A | ** | ||||||
4094851-G-A | 4226810-G-A | ** | ||||||
28708443-C-A | 26562296-C-A | ** | ||||||
13237635-C-A | 11081959-C-A | ** | ||||||
3550569-CAACTCA-C | 3682528-CAACTCA-C | ** | ||||||
4388611-C-A | 4520570-C-A | ** | ||||||
17624511-A-C | 15512631-A-C | ** | ||||||
10889541-G-A | ** | |||||||
21182389-C-T | 19020503-C-T | ** | ||||||
10846787-C-G | FT433892 | ** | ||||||
10846821-G-A | ** | |||||||
10846845-C-A | ** | |||||||
10846862-CCATTT-C | ** | |||||||
10846895-TTTCATTCCATTCCAC-T | ** | |||||||
10846928-C-T | ** | |||||||
10846932-C-A | ** | |||||||
28744946-G-A | 26598799-G-A | ** | ||||||
7160738-C-A | 7292697-C-A | ** | ||||||
56734830-T-C | ** | |||||||
10745352-T-TTCCAA | ** | |||||||
10033234-C-G | 10195625-C-G | ** | ||||||
4473080-G-T | 4605039-G-T | ** | ||||||
24512356-C-A | 22366209-C-A | ** | ||||||
10745327-T-C | ** | |||||||
13881351-C-A | 11760645-C-A | ** | ||||||
14038106-C-A | 11917400-C-A | ** | ||||||
5471907-A-T | 5603866-A-T | BY58716 | ** | |||||
16077539-AAAGC-A | 13965659-AAAGC-A | ** | ||||||
7572904-C-A | 7704863-C-A | ** | ||||||
16848462-C-A | 14736582-C-A | ** | ||||||
3048158-C-A | 3180117-C-A | ** | ||||||
56837239-C-A | ** | |||||||
10759183-T-C | ** | |||||||
10861211-C-A | ** | |||||||
14544144-C-A | 12432345-C-A | ** | ||||||
20970353-A-AAG | 18808467-A-AAG | P4_Dst | ** | |||||
10850513-T-G | ** | |||||||
10941479-C-T | ** | |||||||
28555535-C-A | 26409388-C-A | ** | ||||||
18329044-T-C | 16217164-T-C | P6_Prx | ** | |||||
6355680-G-T | 6487639-G-T | ** | ||||||
13461553-A-G | 11305877-A-G | ** | ||||||
23142382-C-A | 20980496-C-A | ** | ||||||
7184907-C-A | 7316866-C-A | ** | ||||||
14530840-GA-G | 12419041-GA-G | 8×A | ** | |||||
11020969-C-A | ** | |||||||
15420191-C-A | 13308311-C-A | ** | ||||||
10858892-C-A | FT45507 | ** | ||||||
3646893-G-A | 3778852-G-A | ** | ||||||
14562879-C-A | 12451079-C-A | ** | ||||||
16993836-C-A | 14881956-C-A | ** | ||||||
10670996-C-A | ** | |||||||
10776329-G-T | ** | |||||||
19507197-C-A | 17395317-C-A | ** | ||||||
3804835-C-A | 3936794-C-A | ** | ||||||
26024550-T-TC | 23878403-T-TC | P1_Y1 | ** | |||||
13468111-C-T | 11312435-C-T | FTA47545 | ** | |||||
13221916-C-A | 11066240-C-A | ** | ||||||
10822690-C-G | FT432752 | ** | ||||||
2682855-C-A | 2814814-C-A | ** | ||||||
7541259-C-A | 7673218-C-A | ** | ||||||
10765191-C-T | ** | |||||||
15400000-C-A | 13288120-C-A | ** | ||||||
14493588-C-A | 12381785-C-A | ** | ||||||
22064019-C-A | 19902133-C-A | FT79991 | ** | |||||
15400425-C-A | 13288545-C-A | ** | ||||||
4672218-C-A | 4804177-C-A | ** | ||||||
14017655-C-A | 11896949-C-A | ** | ||||||
14562760-C-A | 12450960-C-A | ** | ||||||
8159072-C-A | 8291031-C-A | ** | ||||||
10765112-ATTTCG-A | ** | |||||||
5621284-C-A | 5753243-C-A | ** | ||||||
10870887-G-T | FT205933 | ** | ||||||
10981989-G-T | ** | |||||||
13874648-G-A | 11753942-G-A | ** | ||||||
15239022-C-A | 13127108-C-A | ** | ||||||
4957058-C-A | 5089017-C-A | ** | ||||||
10889520-C-T | ** | |||||||
8385227-C-A | 8517186-C-A | ** | ||||||
14537709-C-A | 12425910-C-A | ** | ||||||
5219498-T-TA | 5351457-T-TA | 9×A | ** | |||||
21412261-CTTTTT-C | 19250375-CTTTTT-C | 36×T | ** | |||||
7143441-C-A | 7275400-C-A | ** | ||||||
15371009-C-A | 13259129-C-A | ** | ||||||
5231040-G-A | 5362999-G-A | ** | ||||||
3284090-C-A | 3416049-C-A | ** | ||||||
9076056-C-A | 9238447-C-A | ** | ||||||
16652043-C-A | 14540163-C-A | ** | ||||||
10751041-T-C | ** | |||||||
19293765-CGT-C | 17181885-CGT-C | ** | ||||||
19356396-G-T | 17244516-G-T | ** | ||||||
21328805-C-A | 19166919-C-A | 30×A | ** | |||||
28641131-C-A | 26494984-C-A | ** | ||||||
16704373-C-A | 14592493-C-A | ** | ||||||
13987101-C-A | 11866395-C-A | ** | ||||||
10765107-T-A | ** | |||||||
5126165-C-A | 5258124-C-A | ** | ||||||
28605351-C-A | 26459204-C-A | ** | ||||||
10864449-C-A | ** | |||||||
10899120-CACTAT-C | ** | |||||||
17713888-C-A | 15602008-C-A | ** | ||||||
10765126-C-T | FT430218 | ** | ||||||
10765186-A-T | ** | |||||||
16868752-T-C | 14756872-T-C | ** | ||||||
16941569-T-C | 14829689-T-C | ** | ||||||
16562921-C-A | 14451041-C-A | ** | ||||||
14074043-C-A | 11953337-C-A | ** | ||||||
15650562-C-A | 13538682-C-A | ** | ||||||
10980491-C-A | ** | |||||||
17211213-C-A | 15099333-C-A | ** | ||||||
21802881-C-A | 19640995-C-A | ** | ||||||
17546061-C-A | 15434181-C-A | ** | ||||||
4262526-C-A | 4394485-C-A | ** | ||||||
28666636-G-T | 26520489-G-T | ** | ||||||
10875099-G-C | ** | |||||||
10875104-G-C | ** | |||||||
13200445-C-A | 11044769-C-A | ** | ||||||
15431738-C-A | 13319858-C-A | ** | ||||||
19795144-C-CAAA | 17683264-C-CAAA | P5_Prx | 16×A | ** | ||||
13631332-C-A | 11475656-C-A | ** | ||||||
4560927-C-A | 4692886-C-A | ** | ||||||
15793540-C-A | 13681660-C-A | ** | ||||||
14009403-C-A | 11888697-C-A | ** | ||||||
56861637-G-T | ** | |||||||
3559930-C-A | 3691889-C-A | ** | ||||||
5547013-G-T | 5678972-G-T | ** | ||||||
11001366-C-A | ** | |||||||
8699767-A-G | 8831726-A-G | ** | ||||||
56849664-G-T | ** | |||||||
14366696-C-A | 12245991-C-A | ** | ||||||
10945579-G-T | ** | |||||||
13522210-G-T | 11366534-G-T | ** | ||||||
13226457-C-A | 11070781-C-A | ** | ||||||
5669251-C-A | 5801210-C-A | ** | ||||||
14274144-C-A | 12153438-C-A | ** | ||||||
21428520-C-A | 19266634-C-A | FGC33351 | ** | |||||
15477265-C-A | 13365385-C-A | ** | ||||||
10899042-T-A | ** | |||||||
7423715-C-A | 7555674-C-A | ** | ||||||
10894148-C-A | ** | |||||||
7311497-C-A | 7443456-C-A | ** | ||||||
21427645-T-A | 19265759-T-A | ** | ||||||
3726509-C-A | 3858468-C-A | ** | ||||||
10889573-A-C | ** | |||||||
24407118-G-T | 22260971-G-T | ** | ||||||
6729761-C-A | 6861720-C-A | ** | ||||||
10927411-C-A | ** | |||||||
17333953-G-T | 15222073-G-T | FT297231 | ** | |||||
10787921-C-A | ** | |||||||
10869901-C-A | ** | |||||||
14431496-C-A | 12310769-C-A | ** | ||||||
19127644-ATATAT-A | 17015764-ATATAT-A | ** | ||||||
16095932-A-G | 13984052-A-G | ** | ||||||
17562028-G-A | 15450148-G-A | ** | ||||||
13513393-C-A | 11357717-C-A | ** | ||||||
10804965-A-C | ** | |||||||
10765108-T-A | ** | |||||||
13919226-G-C | 11798520-G-C | ** | ||||||
13468349-T-A | 11312673-T-A | ** | ||||||
2906816-C-A | 3038775-C-A | ** | ||||||
14032601-C-A | 11911895-C-A | ** | ||||||
5824806-C-A | 5956765-C-A | ** | ||||||
14561871-C-A | 12450072-C-A | ** | ||||||
18263727-C-A | 16151847-C-A | ** | ||||||
5171719-C-A | 5303678-C-A | ** | ||||||
2768017-A-G | 2899976-A-G | ** | ||||||
2806240-C-T | 2938199-C-T | ** | ||||||
2906796-C-A | 3038755-C-A | ** | ||||||
3005907-C-T | 3137866-C-T | ** | ||||||
3039424-C-A | 3171383-C-A | ** | ||||||
3093942-C-A | 3225901-C-A | ** | ||||||
3204245-C-A | 3336204-C-A | ** | ||||||
3244442-T-A | 3376401-T-A | ** | ||||||
3250745-T-C | 3382704-T-C | ** | ||||||
3297659-A-G | 3429618-A-G | ** | ||||||
3346674-C-T | 3478633-C-T | ** | ||||||
3374164-A-T | 3506123-A-T | ** | ||||||
3535709-A-G | 3667668-A-G | ** | ||||||
3590388-G-T | 3722347-G-T | ** | ||||||
3599806-C-A | 3731765-C-A | ** | ||||||
3651345-C-T | 3783304-C-T | ** | ||||||
3670693-C-T | 3802652-C-T | ** | ||||||
3800274-C-A | 3932233-C-A | ** | ||||||
3821105-G-T | 3953064-G-T | ** | ||||||
3876079-A-G | 4008038-A-G | ** | ||||||
3933038-C-A | 4064997-C-A | ** | ||||||
3965887-C-A | 4097846-C-A | ** | ||||||
3992271-A-G | 4124230-A-G | ** | ||||||
3995311-C-A | 4127270-C-A | ** | ||||||
4210545-G-T | 4342504-G-T | ** | ||||||
4245143-T-C | 4377102-T-C | ** | ||||||
4325110-C-A | 4457069-C-A | ** | ||||||
4364752-C-A | 4496711-C-A | ** | ||||||
4364832-C-A | 4496791-C-A | ** | ||||||
4389481-A-G | 4521440-A-G | ** | ||||||
4408946-C-A | 4540905-C-A | ** | ||||||
4426051-T-A | 4558010-T-A | ** | ||||||
4456073-G-T | 4588032-G-T | ** | ||||||
4504666-T-C | 4636625-T-C | ** | ||||||
4563205-G-A | 4695164-G-A | ** | ||||||
4669592-A-G | 4801551-A-G | ** | ||||||
4669651-T-A | 4801610-T-A | ** | ||||||
4669705-T-C | 4801664-T-C | ** | ||||||
4705974-C-A | 4837933-C-A | ** | ||||||
4751468-G-T | 4883427-G-T | ** | ||||||
4778744-T-C | 4910703-T-C | ** | ||||||
4810174-A-T | 4942133-A-T | ** | ||||||
4926382-A-T | 5058341-A-T | ** | ||||||
4970255-G-T | 5102214-G-T | ** | ||||||
5030892-G-T | 5162851-G-T | ** | ||||||
5034265-A-T | 5166224-A-T | ** | ||||||
5059300-C-A | 5191259-C-A | ** | ||||||
5101078-C-A | 5233037-C-A | ** | ||||||
5191436-C-T | 5323395-C-T | ** | ||||||
5199600-C-A | 5331559-C-A | ** | ||||||
5216658-C-A | 5348617-C-A | ** | ||||||
5326236-A-G | 5458195-A-G | ** | ||||||
5507537-G-T | 5639496-G-T | ** | ||||||
5523769-G-A | 5655728-G-A | FT62636 | ** | |||||
5524677-A-T | 5656636-A-T | ** | ||||||
5627637-A-G | 5759596-A-G | ** | ||||||
5681592-C-A | 5813551-C-A | ** | ||||||
5685020-T-C | 5816979-T-C | ** | ||||||
5698890-A-G | 5830849-A-G | ** | ||||||
5844433-C-A | 5976392-C-A | ** | ||||||
5851267-C-A | 5983226-C-A | ** | ||||||
5895566-C-A | 6027525-C-A | ** | ||||||
5995414-G-T | 6127373-G-T | ** | ||||||
6032303-C-A | 6164262-C-A | ** | ||||||
6053444-C-T | 6185403-C-T | ** | ||||||
6313894-A-G | 6445853-A-G | IR3_Dst | ** | |||||
6359185-C-T | 6491144-C-T | ** | ||||||
6359217-G-T | 6491176-G-T | ** | ||||||
6435947-C-A | 6567906-C-A | ** | ||||||
6505595-A-G | 6637554-A-G | ** | ||||||
6505615-G-T | 6637574-G-T | ** | ||||||
6642426-C-A | 6774385-C-A | ** | ||||||
6646396-G-A | 6778355-G-A | ** | ||||||
6748853-C-A | 6880812-C-A | ** | ||||||
6772875-C-A | 6904834-C-A | ** | ||||||
7094561-T-C | 7226520-T-C | ** | ||||||
7138325-A-G | 7270284-A-G | ** | ||||||
7149211-G-T | 7281170-G-T | ** | ||||||
7180081-C-A | 7312040-C-A | ** | ||||||
7239600-C-T | 7371559-C-T | ** | ||||||
7254338-G-C | 7386297-G-C | ** | ||||||
7258645-C-A | 7390604-C-A | ** | ||||||
7316593-G-T | 7448552-G-T | ** | ||||||
7342376-C-A | 7474335-C-A | ** | ||||||
7390050-G-A | 7522009-G-A | ** | ||||||
7541270-C-A | 7673229-C-A | ** | ||||||
7632705-G-A | 7764664-G-A | ** | ||||||
7894686-C-T | 8026645-C-T | ** | ||||||
7990186-G-T | 8122145-G-T | ** | ||||||
8080525-G-T | 8212484-G-T | ** | ||||||
8235732-C-A | 8367691-C-A | ** | ||||||
8295518-G-A | 8427477-G-A | ** | ||||||
8671410-A-T | 8803369-A-T | ** | ||||||
8733812-G-T | 8865771-G-T | ** | ||||||
8822480-G-A | 8954439-G-A | ** | ||||||
8878866-C-A | 9010825-C-A | ** | ||||||
9125489-C-A | ** | |||||||
9079427-A-G | 9241818-A-G | ** | ||||||
9079494-G-T | 9241885-G-T | ** | ||||||
9082107-C-A | 9244498-C-A | ** | ||||||
9442213-G-T | 9604604-G-T | ** | ||||||
9824028-G-T | 9986419-G-T | ** | ||||||
9915820-T-C | 10078211-T-C | ** | ||||||
9925057-T-G | 10087448-T-G | ** | ||||||
9936749-T-A | 10099140-T-A | ** | ||||||
9940027-A-T | 10102418-A-T | ** | ||||||
10014265-G-T | 10176656-G-T | ** | ||||||
10056441-T-C | 10218832-T-C | ** | ||||||
10057959-A-G | 10220350-A-G | ** | ||||||
10631485-T-A | ** | |||||||
10657666-A-G | ** | |||||||
10660067-G-A | ** | |||||||
10750863-C-A | ** | |||||||
10765086-A-G | ** | |||||||
10765130-C-T | ** | |||||||
10765156-C-T | ** | |||||||
10765160-C-A | ** | |||||||
10765178-G-A | ** | |||||||
10765202-T-C | ** | |||||||
10765203-T-A | ** | |||||||
10773572-C-A | ** | |||||||
10781771-A-G | ** | |||||||
10798055-C-A | ** | |||||||
10803657-A-C | ** | |||||||
10806461-C-G | ** | |||||||
10810687-T-C | ** | |||||||
10846617-T-C | ** | |||||||
10850509-ACACTC-A | ** | |||||||
10858012-C-A | ** | |||||||
10858258-C-A | ** | |||||||
10864542-C-A | ** | |||||||
10875107-T-C | ** | |||||||
10875112-C-T | ** | |||||||
10899050-C-G | ** | |||||||
10899062-C-CTACTT | ** | |||||||
10899084-C-CCACCA | ** | |||||||
10899087-T-TTTATC | ** | |||||||
10899111-A-C | ** | |||||||
10899112-C-A | ** | |||||||
10907745-C-A | ** | |||||||
10912509-G-T | ** | |||||||
10927935-A-G | ** | |||||||
10945693-C-T | ** | |||||||
10978071-A-T | ** | |||||||
10983165-C-A | ** | |||||||
10984365-C-A | ** | |||||||
11010038-C-T | ** | |||||||
11016041-G-T | ** | |||||||
11035269-C-A | ** | |||||||
13226861-C-A | 11071185-C-A | ** | ||||||
13226884-A-G | 11071208-A-G | ** | ||||||
13228964-C-A | 11073288-C-A | ** | ||||||
13233382-G-A | 11077706-G-A | ** | ||||||
13242899-C-A | 11087223-C-A | ** | ||||||
13326003-C-T | 11170327-C-T | ** | ||||||
13468089-G-A | 11312413-G-A | ** | ||||||
13485374-T-C | 11329698-T-C | ** | ||||||
13565689-C-A | 11410013-C-A | ** | ||||||
13725043-A-T | 11569367-A-T | ** | ||||||
11646368-G-T | ** | |||||||
11676476-G-A | ** | |||||||
13874635-G-T | 11753929-G-T | ** | ||||||
13893230-C-A | 11772524-C-A | ** | ||||||
13897269-C-A | 11776563-C-A | ** | ||||||
13958928-G-T | 11838222-G-T | ** | ||||||
14009425-G-T | 11888719-G-T | ** | ||||||
14019567-A-G | 11898861-A-G | ** | ||||||
14226499-A-G | 12105793-A-G | ** | ||||||
14253267-A-G | 12132561-A-G | ** | ||||||
14305045-G-T | 12184339-G-T | ** | ||||||
14364237-G-A | 12243532-G-A | ** | ||||||
14451312-T-C | 12330585-T-C | ** | ||||||
14531234-CA-C | 12419435-CA-C | ** | ||||||
14714728-G-A | 12602795-G-A | ** | ||||||
15070364-TG-T | 12958455-TG-T | ** | ||||||
15083306-C-A | 12971396-C-A | ** | ||||||
15202346-C-A | 13090432-C-A | ** | ||||||
15209284-C-A | 13097370-C-A | ** | ||||||
15355063-C-A | 13243182-C-A | ** | ||||||
15411404-C-A | 13299524-C-A | ** | ||||||
15655379-C-A | 13543499-C-A | ** | ||||||
15741272-C-A | 13629392-C-A | ** | ||||||
15971370-A-G | 13859490-A-G | ** | ||||||
16063557-G-T | 13951677-G-T | ** | ||||||
16079537-TC-T | 13967657-TC-T | ** | ||||||
16205841-C-A | 14093961-C-A | ** | ||||||
16266215-A-G | 14154335-A-G | ** | ||||||
16278452-A-T | 14166572-A-T | ** | ||||||
16430761-C-T | 14318881-C-T | FT109264 | ** | |||||
16463573-G-T | 14351693-G-T | ** | ||||||
16602751-T-A | 14490871-T-A | ** | ||||||
16663372-C-A | 14551492-C-A | ** | ||||||
16829089-C-A | 14717209-C-A | FT305172 | ** | |||||
16883478-A-G | 14771598-A-G | ** | ||||||
16978999-GAA-G | 14867119-GAA-G | 14×A | ** | |||||
17000362-G-A | 14888482-G-A | ** | ||||||
17162600-C-T | 15050720-C-T | ** | ||||||
17215804-A-G | 15103924-A-G | ** | ||||||
17231344-GA-G | 15119464-GA-G | ** | ||||||
17276886-T-A | 15165006-T-A | ** | ||||||
17378598-A-G | 15266718-A-G | ** | ||||||
17534916-TC-T | 15423036-TC-T | ** | ||||||
17580194-T-C | 15468314-T-C | ** | ||||||
17580276-C-A | 15468396-C-A | ** | ||||||
17707336-C-A | 15595456-C-A | ** | ||||||
17813444-C-T | 15701564-C-T | ** | ||||||
18058710-G-T | 15946830-G-T | ** | ||||||
18196054-T-C | 16084174-T-C | ** | ||||||
18381924-C-A | 16270044-C-A | P6_Gap | ** | |||||
18401287-G-T | 16289407-G-T | P6_Gap | ** | |||||
18650589-T-C | 16538709-T-C | ** | ||||||
18812102-G-A | 16700222-G-A | ** | ||||||
18901985-G-A | 16790105-G-A | ** | ||||||
19041639-G-T | 16929759-G-T | ** | ||||||
19155082-A-G | 17043202-A-G | ** | ||||||
19297078-G-T | 17185198-G-T | ** | ||||||
19312479-C-A | 17200599-C-A | ** | ||||||
19506882-C-A | 17395002-C-A | ** | ||||||
20685346-C-A | 18523460-C-A | P4_Prx | ** | |||||
21109850-C-A | 18947964-C-A | FTA20111 | ** | |||||
21394620-A-T | 19232734-A-T | ** | ||||||
21428664-C-A | 19266778-C-A | ** | ||||||
21502544-G-T | 19340658-G-T | ** | ||||||
21743664-T-C | 19581778-T-C | ** | ||||||
21911113-T-G | 19749227-T-G | ** | ||||||
21915698-A-G | 19753812-A-G | ** | ||||||
22128664-G-C | 19966778-G-C | ** | ||||||
22211343-G-A | 20049457-G-A | ** | ||||||
22215155-C-A | 20053269-C-A | ** | ||||||
22215157-A-G | 20053271-A-G | ** | ||||||
22287125-AAGTC-G | 20125239-AAGTC-G | DYZ19 | ** | |||||
22614240-G-A | 20452354-G-A | ** | ||||||
22624890-C-A | 20463004-C-A | ** | ||||||
22660771-T-C | 20498885-T-C | ** | ||||||
22868788-G-T | 20706902-G-T | ** | ||||||
23185026-G-A | 21023140-G-A | ** | ||||||
23441917-G-T | 21280031-G-T | ** | ||||||
23875554-C-T | 21713668-C-T | ** | ||||||
24008411-C-A | 21862264-C-A | ** | ||||||
24080277-G-T | 21934130-G-T | P3_b1 | ** | |||||
24535388-C-A | 22389241-C-A | P3_t2 | ** | |||||
25990620-T-C | 23844473-T-C | P1_Y1 | ** | |||||
26003056-T-G | 23856909-T-G | P1_Y1 | ** | |||||
26325116-T-C | 24178969-T-C | P1_Y1 | ** | |||||
26427098-G-T | 24280951-G-T | P1_Y1 | ** | |||||
28459367-G-T | 26313220-G-T | ** | ||||||
28557976-C-A | 26411829-C-A | ** | ||||||
28600528-A-G | 26454381-A-G | ** | ||||||
28698814-G-A | 26552667-G-A | ** | ||||||
28707744-C-A | 26561597-C-A | ** | ||||||
28717182-G-T | 26571035-G-T | ** | ||||||
28725918-C-A | 26579771-C-A | ** | ||||||
28744956-T-C | 26598809-T-C | ** | ||||||
28764131-C-A | 26617984-C-A | ** | ||||||
8874988-G-T | 9006947-G-T | *** | ||||||
6090484-G-GA | 6222443-G-GA | 10×A | *** | |||||
10885118-A-T | *** | |||||||
13226633-C-A | 11070957-C-A | FT441310 | *** | |||||
13484077-A-T | 11328401-A-T | *** | ||||||
19391141-C-A | 17279261-C-A | *** | ||||||
13523592-C-A | 11367916-C-A | *** | ||||||
10755391-CATCTCTGTTT-C,CCTCTCTGTTC | *** | |||||||
24517660-C-CT | 22371513-C-CT | 9×T | *** | |||||
21663277-AG-AA,G | 19501391-AG-AA,G | *** | ||||||
10672703-C-A | *** | |||||||
10661716-T-A | *** | |||||||
21365422-CA-C,CAA | 19203536-CA-C,CAA | 17×A | *** | |||||
10945450-GCTTTC-G,GCATTC | *** | |||||||
24071567-C-A | 21925420-C-A | P3_b1 | *** | |||||
14227552-C-A | 12106846-C-A | *** | ||||||
15029495-CTTT-C,CTT | 12917583-CTTT-C,CTT | 16×T | *** | |||||
7298867-G-T | 7430826-G-T | *** | ||||||
6346021-GTT-G,GT | 6477980-GTT-G,GT | 12×T | *** | |||||
2805552-G-GA | 2937511-G-GA | *** | ||||||
2763792-AAC-A,AA | 2895751-AAC-A,AA | *** | ||||||
8351787-T-C | 8483746-T-C | *** | ||||||
10661690-A-G | *** | |||||||
10661697-T-A | *** | |||||||
10744271-CCATTC-C,CCATTT | *** | |||||||
14557913-G-T | 12446114-G-T | *** | ||||||
15685179-C-A | 13573299-C-A | *** | ||||||
15975244-G-A | 13863364-G-A | *** | ||||||
16344473-T-TC | 14232593-T-TC | *** | ||||||
16602908-G-A | 14491028-G-A | *** | ||||||
18194257-C-G | 16082377-C-G | *** | ||||||
23327307-T-C | 21165421-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.