Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z46375 > DF106 > DF104 > DF105 > ZZ87 > FGC4108/S588 > S603 > FGC19831 > FGC19839 > FGC19833 > FGC19832 > FGC19838 > FGC19830 > FGC59311

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Blocks	Names	Region	McDonald BED	combBED	STR	FGC 7VXNN
5630497-G-A	5762456-G-A		FGC59309					+
23859793-G-C	21697907-G-C		FGC59316			Y		+
21452371-C-A	19290485-C-A		FGC59314		Y	Y		+
2910230-T-G	3042189-T-G		FGC59307		Y	Y		+
3285961-T-G	3417920-T-G		FGC59308					+
21284512-C-A	19122626-C-A		FGC59313		Y	Y		+
19065135-C-T	16953255-C-T		FGC59312		Y			+
18170182-AT-A	16058302-AT-A							*
18055964-C-A	15944084-C-A							**
18707925-C-T	16596045-C-T							**
22483791-G-A	20321905-G-A			DYZ19				**
13488804-C-T	11333128-C-T							**
13700231-G-C	11544555-G-C							**
59020047-G-A	56873900-G-A							**
3686453-G-A	3818412-G-A							**
3316249-A-T	3448208-A-T							**
59020586-A-G	56874439-A-G							**
13535681-ATGTGTG-A	11380005-ATGTGTG-A						9×TG	**
13876951-G-A	11756245-G-A							**
13877059-G-T	11756353-G-T							**
59013283-C-T	56867136-C-T							**
4624104-G-T	4756063-G-T							**
8091307-A-C	8223266-A-C							**
5749291-A-AT	5881250-A-AT						8×T	**
58862663-C-G	56728208-G-C							**
8091300-T-C	8223259-T-C							**
8091297-A-G	8223256-A-G							**
7574880-T-C	7706839-T-C							**
22195637-T-G	20033751-T-G							**
7342633-G-A	7474592-G-A							**
9431970-C-A	9594361-C-A							**
21119064-G-T	18957178-G-T							**
59012382-G-C	56866235-G-C							**
22490685-G-T	20328799-G-T			DYZ19				**
58869168-T-C	56721703-A-G							**
22432641-C-T	20270755-C-T		BY218102	DYZ19				**
10073034-T-C	10235425-T-C							**
22242973-G-A	20081087-G-A			DYZ19				**
59008164-G-A	56862017-G-A							**
13383733-G-T	11228057-G-T							**
13877195-T-C	11756489-T-C							**
18408414-G-A	16296534-G-A			P6_Gap				**
15298565-C-T	13186664-C-T							**
14740478-A-C	12628546-A-C							**
15299465-T-A	13187564-T-A							**
22490504-G-T	20328618-G-T			DYZ19				**
15636128-T-C	13524248-T-C							**
6607744-C-T	6739703-C-T							**
23101272-C-T	20939386-C-T							**
23291110-C-T	21129224-C-T							**
14740482-G-T	12628550-G-T							**
14740479-G-A	12628547-G-A							**
23101262-A-G	20939376-A-G							**
59009151-G-GA	56863004-G-GA							**
18000727-TC-T	15888847-TC-T			P7_Gap				**
14635668-C-T	12523737-C-T							**
14452041-T-C	12331314-T-C							**
17431370-G-T	15319490-G-T							**
13718973-A-G	11563297-A-G							**
59018074-A-G	56871927-A-G							**
14451995-C-T	12331268-C-T							**
22228257-A-T	20066371-A-T			DYZ19				***
22197147-A-G	20035261-A-G							***
22223291-A-C	20061405-A-C			DYZ19				***
22242235-T-C	20080349-T-C			DYZ19				***
22197179-A-G	20035293-A-G							***
22991138-T-G	20829252-T-G							***
22197166-T-C	20035280-T-C							***
22242369-T-C	20080483-T-C			DYZ19				***
22223338-C-T	20061452-C-T			DYZ19				***
24052028-T-A	21905881-T-A			P3_b1				***
22991163-G-A	20829277-G-A							***
22197127-T-G	20035241-T-G							***
23008156-T-A	20846270-T-A							***
23014112-G-A	20852226-G-A							***
22197126-C-T	20035240-C-T							***
22197122-A-G	20035236-A-G							***
22245037-G-A	20083151-G-A			DYZ19				***
23181358-A-T	21019472-A-T							***
23358132-G-T	21196246-G-T							***
22153540-A-G	19991654-A-G							***
24044527-G-T	21898380-G-T							***
21966963-A-G	19805077-A-G							***
22509640-C-G	20347754-C-G			DYZ19				***
22837218-G-C	20675332-G-C							***
22257903-T-G	20096017-T-G			DYZ19				***
22447572-G-C	20285686-G-C			DYZ19				***
22511264-T-G	20349378-T-G			DYZ19				***
22511278-A-G	20349392-A-G			DYZ19				***
22509338-G-A	20347452-G-A			DYZ19				***
22509317-C-G	20347431-C-G			DYZ19				***
22509302-T-G	20347416-T-G			DYZ19				***
21910262-A-G	19748376-A-G							***
22503121-T-C	20341235-T-C			DYZ19				***
22511300-T-A	20349414-T-A			DYZ19				***
22475591-T-A	20313705-T-A			DYZ19				***
22511315-C-A	20349429-C-A			DYZ19				***
22624623-C-A	20462737-C-A							***
22474355-G-A	20312469-G-A			DYZ19				***
22474346-C-G	20312460-C-G			DYZ19				***
22440807-A-G	20278921-A-G			DYZ19				***
22275920-C-A	20114034-C-A			DYZ19				***
22437691-T-G	20275805-T-G			DYZ19				***
22437525-A-T	20275639-A-T			DYZ19				***
22319047-T-G	20157161-T-G			DYZ19				***
22642571-A-C	20480685-A-C							***
22319018-G-T	20157132-G-T			DYZ19				***
22303687-T-G	20141801-T-G			DYZ19				***
22303680-A-G	20141794-A-G			DYZ19				***
22303679-C-A	20141793-C-A			DYZ19				***
22510081-G-A	20348195-G-A			DYZ19				***
22300124-C-T	20138238-C-T			DYZ19				***
22279970-G-A	20118084-G-A			DYZ19				***
22279348-C-T	20117462-C-T			DYZ19				***
22991118-C-T	20829232-C-T							***
58830344-C-T	56760527-G-A							***
20959840-G-A	18797954-G-A			P4_Dst				***
21888112-T-G	19726226-T-G							***
18055135-G-A	15943255-G-A							***
18055092-C-T	15943212-C-T							***
18055113-A-G	15943233-A-G							***
18055115-T-C	15943235-T-C							***
18055117-C-A	15943237-C-A							***
18055122-G-A	15943242-G-A							***
18055134-G-A	15943254-G-A							***
18255870-A-C	16143990-A-C							***
17994568-C-A	15882688-C-A			P7_Prx				***
18274837-T-C	16162957-T-C			P6_Prx				***
18280469-T-C	16168589-T-C			P6_Prx				***
18444111-T-G	16332231-T-G			P6_Dst				***
18457107-T-A	16345227-T-A			P6_Dst				***
18701964-A-T	16590084-A-T							***
18768062-A-T	16656182-A-T							***
18055089-G-T	15943209-G-T							***
17994561-G-A	15882681-G-A			P7_Prx				***
19018267-G-T	16906387-G-T							***
17857177-G-A	15745297-G-A							***
17428792-C-A	15316912-C-A							***
17628886-A-G	15517006-A-G							***
17684373-A-G	15572493-A-G							***
17857152-T-G	15745272-T-G							***
17857166-A-C	15745286-A-C							***
17857176-T-C	15745296-T-C							***
17857190-A-T	15745310-A-T							***
17988411-G-T	15876531-G-T			P7_Prx				***
17857200-T-G	15745320-T-G							***
17857205-G-T	15745325-G-T							***
17857210-C-T	15745330-C-T							***
17857216-T-C	15745336-T-C							***
17857252-C-G	15745372-C-G							***
17857253-T-C	15745373-T-C							***
17857272-G-T	15745392-G-T							***
18879337-T-C	16767457-T-C							***
19030131-G-T	16918251-G-T							***
21887033-C-T	19725147-C-T							***
21278111-G-T	19116225-G-T							***
20801642-C-T	18639756-C-T			P4_Prx			6×CCTT	***
20809503-T-A	18647617-T-A			P4_Gap				***
20971051-T-A	18809165-T-A			P4_Dst				***
20984228-A-C	18822342-A-C			P4_Dst				***
20985570-T-C	18823684-T-C			P4_Dst				***
21274167-G-A	19112281-G-A							***
21337538-A-G	19175652-A-G							***
20617073-G-T	18455187-G-T			P4_Prx				***
21410187-G-T	19248301-G-T							***
21525290-C-T	19363404-C-T							***
21846686-G-T	19684800-G-T							***
21848009-A-G	19686123-A-G							***
21887001-G-A	19725115-G-A							***
21887024-A-G	19725138-A-G							***
21887029-C-T	19725143-C-T							***
20751697-A-G	18589811-A-G			P4_Prx				***
20535775-A-T	18373889-A-T			P5_Dst				***
19328369-A-G	17216489-A-G							***
19756020-C-A	17644140-C-A			P5_Prx				***
19340034-C-T	17228154-C-T							***
19352484-T-A	17240604-T-A							***
19352486-A-C	17240606-A-C							***
19352496-C-T	17240616-C-T							***
19429246-C-T	17317366-C-T							***
19691992-A-T	17580112-A-T			P5_Prx				***
19848090-G-A	17736210-G-A			P5_Prx				***
20392802-T-A	18230916-T-A			P5_Dst				***
19849833-C-A	17737953-C-A			P5_Prx				***
19884827-T-A	17772947-T-A			P5_Prx				***
19986738-G-A	17874858-G-A			P5_Prx				***
20001619-G-T	17889739-G-T			P5_Prx				***
20004294-G-A	17892414-G-A			P5_Prx				***
20023632-C-T	17911752-C-T			P5_Prx				***
20062573-T-C	17950693-T-C			P5_Prx				***
24120091-G-T	21973944-G-T			P3_b1				***
24574656-G-T	22428509-G-T			P3_t2				***
24126342-C-T	21980195-C-T			P3_b1				***
8091297-ATCT-GTCC	8223256-ATCT-GTCC							***
5393256-GGGAGGA-G	5525215-GGGAGGA-G							***
5659683-ATGTG-A	5791642-ATGTG-A						10×TG	***
6467392-CTTTTT-C	6599351-CTTTTT-C						15×T	***
6642527-GGGA-AAGG	6774486-GGGA-AAGG							***
6692828-TCAA-T	6824787-TCAA-T							***
6903321-AGT-GGC	7035280-AGT-GGC							***
6903334-A-AAGTC	7035293-A-AAGTC							***
6903376-TG-CA	7035335-TG-CA							***
8125061-A-AAAAAG	8257020-A-AAAAAG							***
5147440-TCAAA-T	5279399-TCAAA-T							***
8125063-A-AGAGAT	8257022-A-AGAGAT							***
10021063-TCA-T	10183454-TCA-T							***
13141805-A-ATTCCT	10631291-A-ATTCCT							***
13194892-TTCCA-CTCCT	11039216-TTCCA-CTCCT							***
13195753-CTCAATC-ATCCATT	11040077-CTCAATC-ATCCATT							***
13203831-CTAGTGC-GTAGTGG	11048155-CTAGTGC-GTAGTGG							***
13205578-TCA-T	11049902-TCA-T							***
13340609-AG-GT	11184933-AG-GT							***
5241141-C-CTCCG	5373100-C-CTCCG							***
5083952-CTTTTTTT-C	5215911-CTTTTTTT-C						17×T	***
13449764-TATTC-CATTG	11294088-TATTC-CATTG							***
58912814-A-G	56678057-T-C							***
58866448-C-T	56724423-G-A							***
58884045-G-C	56706826-C-G							***
58884268-C-A	56706603-G-T							***
58890212-A-T	56700659-T-A							***
58903121-C-G	56687750-G-C							***
58908866-A-G	56682005-T-C							***
58908899-C-T	56681972-G-A							***
58910144-A-T	56680727-T-A							***
58912847-A-T	56678024-T-A							***
4973667-TCAA-T	5105626-TCAA-T							***
58912859-A-T	56678012-T-A							***
58970734-T-G	56824587-T-G							***
58974853-T-A	56828706-T-A							***
58975954-A-C	56829807-A-C							***
58979512-C-T	56833365-C-T							***
59008633-C-T	56862486-C-T							***
4521331-AA-G	4653290-AA-G							***
3640532-T-TTTCTTTCA	3772491-T-TTTCTTTCA						9×TTCC	***
13447348-A-ACTCCTATCCT	11291672-A-ACTCCTATCCT							***
13459257-AT-TC	11303581-AT-TC							***
58856582-A-T	56734289-T-A							***
27521775-AG-GA	25375628-AG-GA			P1_Y2				***
22509295-CTTAGTGT-TTTTGTGG	20347409-CTTAGTGT-TTTTGTGG			DYZ19				***
22509321-CAGG-AAGA	20347435-CAGG-AAGA			DYZ19				***
22509478-TG-AT	20347592-TG-AT			DYZ19				***
22510048-AGTTC-GGTGG	20348162-AGTTC-GGTGG			DYZ19				***
22767643-C-CAA	20605757-C-CAA							***
23316026-T-TTATA	21154140-T-TTATA							***
23316028-A-ATTGG	21154142-A-ATTGG							***
24998053-TC-T	22851906-TC-T			g1				***
27521828-CAA-TGT	25375681-CAA-TGT			P1_Y2				***
22242410-AAT-CAC	20080524-AAT-CAC			DYZ19				***
28819159-AGGAGTCA-TGGAATCC	26673012-AGGAGTCA-TGGAATCC							***
58908905-C-TACTCGGGTTG	56681966-G-CAACCCGAGTA							***
58976137-C-CTCTGT	56829990-C-CTCTGT							***
58977759-ATTC-TTTT	56831612-ATTC-TTTT							***
58980737-TTG-CTC	56834590-TTG-CTC							***
58982880-CTACTCCATTA-C	56836733-CTACTCCATTA-C							***
59008161-GTAG-TTAA	56862014-GTAG-TTAA							***
59017775-AAAA-TATATATATATATAT	56871628-AAAA-TATATATATATATAT							***
22509124-GTG-CTT	20347238-GTG-CTT			DYZ19				***
22197122-AAGTCT-GAGTTG	20035236-AAGTCT-GAGTTG							***
13461135-TAGAG-CAGAA	11305459-TAGAG-CAGAA							***
14740478-AGGAG-CAGAT	12628546-AGGAG-CAGAT							***
13475436-CCG-ACA	11319760-CCG-ACA							***
13475499-TGCCCCTG-GCCCTCTA	11319823-TGCCCCTG-GCCCTCTA							***
13688232-GAATGC-TAATGG	11532556-GAATGC-TAATGG							***
13695560-GGT-AGA	11539884-GGT-AGA							***
13707392-ACCATT-GGTATA	11551716-ACCATT-GGTATA							***
13845220-A-AAATGGAATTG	11724514-A-AAATGGAATTG							***
13858510-AAATGGAATGGAATGGAATGGAATGGAATGGAATGG-A	11737804-AAATGGAATGGAATGGAATGGAATGGAATGGAATGG-A						15×AATGG	***
13867422-GAATCGA-TAATTGG	11746716-GAATCGA-TAATTGG							***
15643007-TGA-T	13531127-TGA-T							***
21346975-T-TTATATATATATA	19185089-T-TTATATATATATA						29×TA	***
16545628-ATTTTTTT-A	14433748-ATTTTTTT-A						15×T	***
17648472-AAAAAT-A	15536592-AAAAAT-A						4×AAAAT	***
17942005-T-TACAGATACAGACTTGTATCTGTA	15830125-T-TACAGATACAGACTTGTATCTGTA							***
18006846-CCCTCT-C	15894966-CCCTCT-C			P7_Gap				***
18055076-GAAATTTGTCA-G	15943196-GAAATTTGTCA-G							***
18055089-GGCC-TGCT	15943209-GGCC-TGCT							***
18055113-AATCC-GACCA	15943233-AATCC-GACCA							***
18055134-GG-AA	15943254-GG-AA							***
58862794-C-A	56728077-G-T							***
58856580-A-G	56734291-T-C							***
24152206-T-A	22006059-T-A			P3_b1				***
26355678-G-T	24209531-G-T			P1_Y1				***
25996989-G-C	23850842-G-C			P1_Y1				***
26010116-T-C	23863969-T-C			P1_Y1				***
26055391-G-T	23909244-G-T			P1_Y1				***
26068536-A-C	23922389-A-C			P1_Y1				***
26262839-C-T	24116692-C-T			P1_Y1				***
26313426-C-G	24167279-C-G			P1_Y1				***
26313430-T-C	24167283-T-C			P1_Y1				***
26318310-A-G	24172163-A-G			P1_Y1				***
26404144-C-A	24257997-C-A			P1_Y1				***
25876247-C-T	23730100-C-T			P1_Y1				***
26418422-T-A	24272275-T-A			P1_Y1				***
26564130-G-A	24417983-G-A			P1_g2				***
26564133-G-T	24417986-G-T			P1_g2				***
26579855-G-T	24433708-G-T			P1_g2				***
26593568-C-T	24447421-C-T			P1_g2				***
26617701-A-C	24471554-A-C			P1_g2				***
26617734-T-C	24471587-T-C			P1_g2				***
26645664-C-A	24499517-C-A			P1_g2				***
25899664-C-T	23753517-C-T			P1_Y1				***
25736518-G-A	23590371-G-A			P1_b3				***
27021371-A-T	24875224-A-T			P1_r4				***
24696109-C-A	22549962-C-A			P3_b2			15×A	***
24168344-T-C	22022197-T-C			P3_b1				***
24220251-C-A	22074104-C-A			P3_b1				***
24277473-G-T	22131326-G-T			P3_b1				***
24435251-C-A	22289104-C-A							***
24491428-A-G	22345281-A-G							***
24536725-G-A	22390578-G-A			P3_t2				***
17164336-A-C	15052456-A-C							***
24574806-A-C	22428659-A-C			P3_t2				***
24996924-A-C	22850777-A-C			g1				***
25577241-G-A	23431094-G-A			P1_gr1				***
25094675-C-T	22948528-C-T			g1				***
25131941-G-T	22985794-G-T			g1				***
25145960-A-G	22999813-A-G			g1				***
25158898-G-A	23012751-G-A			g1				***
25158998-A-C	23012851-A-C			g1				***
25316999-G-A	23170852-G-A			P2_r1				***
25402499-G-T	23256352-G-T			P2_r2				***
25566631-C-A	23420484-C-A			P1_gr1				***
26699283-G-T	24553136-G-T			P1_g2				***
27161750-G-A	25015603-G-A			P1_g3				***
58856567-A-T	56734304-T-A							***
28264670-C-T	26118523-C-T			P1_b4				***
27995790-G-A	25849643-G-A			P1_Y2				***
28021942-A-T	25875795-A-T			P1_Y2				***
28031163-G-T	25885016-G-T			P1_Y2				***
28095435-T-C	25949288-T-C			P1_Y2				***
28146506-C-T	26000359-C-T			P1_b4				***
28207309-T-C	26061162-T-C			P1_b4				***
28234643-A-T	26088496-A-T			P1_b4				***
28245083-A-G	26098936-A-G			P1_b4				***
28474933-T-C	26328786-T-C							***
27868650-A-T	25722503-A-T			P1_Y2				***
28675675-G-A	26529528-G-A							***
28750419-A-T	26604272-A-T							***
28784828-T-G	26638681-T-G							***
28784877-C-A	26638730-C-A						4×TGGAA	***
28818239-A-T	26672092-A-T							***
58845864-C-T	56745007-G-A							***
58855239-A-T	56735632-T-A							***
58855245-T-C	56735626-A-G							***
27995781-G-T	25849634-G-T			P1_Y2				***
27862386-A-G	25716239-A-G			P1_Y2				***
27181562-A-T	25035415-A-T			P1_g3				***
27444815-C-T	25298668-C-T			P1_Y2				***
27232245-G-A	25086098-G-A			P1_g3				***
27249205-G-T	25103058-G-T			P1_g3				***
27254650-A-T	25108503-A-T			P1_g3				***
27254684-A-C	25108537-A-C			P1_g3				***
27266976-T-G	25120829-T-G			P1_g3				***
27317960-C-T	25171813-C-T			P1_g3				***
27321477-A-C	25175330-A-C			P1_g3				***
27398490-C-A	25252343-C-A			P1_g3				***
27521744-G-A	25375597-G-A			P1_Y2				***
27855883-A-G	25709736-A-G			P1_Y2				***
27521752-T-C	25375605-T-C			P1_Y2				***
27521764-G-A	25375617-G-A			P1_Y2				***
27521775-A-G	25375628-A-G			P1_Y2				***
27521776-G-A	25375629-G-A			P1_Y2				***
27521816-A-C	25375669-A-C			P1_Y2				***
27521828-C-T	25375681-C-T			P1_Y2				***
27575434-A-G	25429287-A-G			P1_Y2				***
27663494-A-G	25517347-A-G			P1_Y2				***
17323772-A-G	15211892-A-G							***
14964514-A-C	12852589-A-C							***
17124953-T-A	15013073-T-A							***
58979785-C-T	56833638-C-T							***
58976042-C-G	56829895-C-G							***
58976058-A-G	56829911-A-G							***
58976063-C-T	56829916-C-T							***
58976049-CA-TG	56829902-CA-TG							***
22483709-C-T	20321823-C-T		BY224512	DYZ19				***
58979733-C-T	56833586-C-T							***
58979764-C-T	56833617-C-T							***
58979790-C-T	56833643-C-T							***
13194767-GTCCT-CTCCA	11039091-GTCCT-CTCCA							***
58979801-A-G	56833654-A-G							***
22242312-T-C	20080426-T-C			DYZ19				***
58833835-T-C	56757036-A-G							***
13340616-C-G	11184940-C-G							***
13340633-G-T	11184957-G-T							***
13340673-C-G	11184997-C-G							***
58979745-C-T	56833598-C-T							***
13194783-A-TCTACTCCAAT	11039107-A-TCTACTCCAAT							***
13194673-TTGA-CTGG	11038997-TTGA-CTGG							***
13340646-GTCCTTTACA-TTTCCTCACG	11184970-GTCCTTTACA-TTTCCTCACG							***
58975807-GCACT-AC	56829660-GCACT-AC							***
22319010-C-T	20157124-C-T			DYZ19				***
22509265-G-C	20347379-G-C		BY225537	DYZ19				***
22509286-G-T	20347400-G-T			DYZ19				***
58975807-G-A	56829660-G-A							***
58979878-T-G	56833731-T-G							***
58979879-G-A	56833732-G-A							***
58975804-A-AAGC	56829657-A-AAGC							***
58980656-ATTC-GTTA	56834509-ATTC-GTTA							***
13194767-G-C	11039091-G-C							***
22436520-AC-A	20274634-AC-A			DYZ19				***
22447777-T-C	20285891-T-C		A4291 BY12383	DYZ19				***
3604621-T-TTAA	3736580-T-TTAA						12×TAA	***
22226941-G-A	20065055-G-A			DYZ19				***
13868585-GA-CG	11747879-GA-CG							***
58820257-C-A	56770614-G-T							***
58834197-C-G	56756674-G-C							***
13194761-A-T	11039085-A-T							***
13340623-CT-AA	11184947-CT-AA							***
13340664-CAGAA-AAGAG	11184988-CAGAA-AAGAG							***
58979801-ATCCT-GTCCC	56833654-ATCCT-GTCCC							***
58979487-C-G	56833340-C-G							***
22238219-G-A	20076333-G-A			DYZ19				***
25073419-G-T	22927272-G-T			g1				***
13535639-G-GTATATA	11379963-G-GTATATA						21×TA	***
13868599-ACG-CGT	11747893-ACG-CGT							***
22319018-GTCAAGT-TTC	20157132-GTCAAGT-TTC			DYZ19				***
24387702-CTA-C	22241555-CTA-C							***
7573139-G-A	7705098-G-A							***
13466398-C-T	11310722-C-T							***
58912794-A-G	56678077-T-C							***
22510109-C-A	20348223-C-A			DYZ19				***
13461217-G-A	11305541-G-A							***
7160930-G-T	7292889-G-T							***
13461151-T-A	11305475-T-A							***
9956377-AAAAG-A	10118768-AAAAG-A							***
6903321-A-G	7035280-A-G							***
13474516-G-T	11318840-G-T							***
3930602-TATAC-T	4062561-TATAC-T							***
13340668-A-G	11184992-A-G							***
13340673-CCTT-GCTG	11184997-CCTT-GCTG							***
13695469-GTG-CTT	11539793-GTG-CTT							***
13340686-GAATGTTT-AAAGGTTC	11185010-GAATGTTT-AAAGGTTC							***
13489277-AT-A	11333601-AT-A							***
22476625-GCAGG-ACAGC	20314739-GCAGG-ACAGC			DYZ19				***
22312074-C-A	20150188-C-A			DYZ19				***
58979750-C-A	56833603-C-A							***
58979752-C-T	56833605-C-T							***
58979753-T-G	56833606-T-G							***
22509974-C-G	20348088-C-G			DYZ19				***
7098901-GTA-G	7230860-GTA-G							***
22476785-CTGC-GTGT	20314899-CTGC-GTGT			DYZ19				***
58980577-TTCCA-CTCCT	56834430-TTCCA-CTCCT							***
13194884-TCA-CCT	11039208-TCA-CCT							***
59021925-CTAG-GTAGT	56875778-CTAG-GTAGT							***
13239513-CTTTTTT-C	11083837-CTTTTTT-C						17×T	***
13473834-GT-AA	11318158-GT-AA							***
28619245-A-G	26473098-A-G							***
28619252-G-T	26473105-G-T							***
58979873-TCCACTG-CCCATGA	56833726-TCCACTG-CCCATGA							***
58979775-ATCTCC-CACTCT	56833628-ATCTCC-CACTCT							***
13461156-A-G	11305480-A-G							***
59019545-CACACACAA-C	56873398-CACACACAA-C							***
13489318-CCT-C	11333642-CCT-C							***
13611988-G-T	11456312-G-T						19×T	***
15088610-GT-G	12976699-GT-G							***
17543960-AT-A	15432080-AT-A							***
22242269-A-T	20080383-A-T			DYZ19				***
22745183-C-CA	20583297-C-CA							***
59017919-G-T	56871772-G-T							***
24425340-C-CATGA	22279193-C-CATGA							***
26479590-CA-C	24333443-CA-C			P1_Y1			16×A	***
3930715-CAT-C	4062674-CAT-C							***
6903347-A-G	7035306-A-G		CTS615					***
22509170-C-T	20347284-C-T			DYZ19				***
22509228-T-A	20347342-T-A			DYZ19				***
22509635-G-A	20347749-G-A		BY48023	DYZ19				***
59011244-G-A	56865097-G-A							***
59013228-C-G	56867081-C-G							***
10055207-C-T	10217598-C-T							***
58994250-GC-CG	56848103-GC-CG							***
59017886-C-T	56871739-C-T							***
58980546-TC-AT	56834399-TC-AT							***
24278268-A-G	22132121-A-G			P3_b1				***
58908905-C-G	56681966-G-C							***
58858901-C-G	56731970-G-C							***
22511324-C-G	20349438-C-G			DYZ19				***
13194755-T-C	11039079-T-C							***
22247434-A-T	20085548-A-T			DYZ19				***
22510198-G-A	20348312-G-A		BY53397	DYZ19				***
58847666-T-A	56743205-A-T							***
13263697-CGTC-TGTT	11108021-CGTC-TGTT							***
22245026-T-C	20083140-T-C			DYZ19				***
58979877-C-T	56833730-C-T							***
22449441-T-A	20287555-T-A			DYZ19				***
22449493-T-C	20287607-T-C			DYZ19				***
13709505-AGCTCCAATGGAATGGAG-GGC	11553829-AGCTCCAATGGAATGGAG-GGC							***
9654346-AGAAGAT-GATAGAA	9816737-AGAAGAT-GATAGAA			IR3_Prx				***
26564156-G-C	24418009-G-C			P1_g2				***
22217117-C-T	20055231-C-T			DYZ19				***
59014208-T-C	56868061-T-C							***
59017896-A-C	56871749-A-C							***
13697222-CA-TT	11541546-CA-TT							***
13194749-C-A	11039073-C-A		BY84214					***
13446532-TTCCATTCCATTCCATTCCAT-C	11290856-TTCCATTCCATTCCATTCCAT-C							***
9295810-CTTG-C	9458201-CTTG-C							***
13485663-AG-CA	11329987-AG-CA							***
13737065-TAG-AAC	11581389-TAG-AAC							***
58848204-C-CCATTG	56742657-G-GAATGC							***
6347737-AGAAA-GGAAG	6479696-AGAAA-GGAAG							***
58854698-A-T	56736173-T-A							***
22366421-G-A	20204535-G-A			DYZ19				***
15320625-G-A	13208731-G-A							***
22449405-T-A	20287519-T-A			DYZ19				***
58979810-C-T	56833663-C-T							***
58979831-A-T	56833684-A-T							***
58979834-C-G	56833687-C-G							***
58979873-T-C	56833726-T-C							***
3822962-GATAT-G	3954921-GATAT-G						26×AT	***
13194740-TATTT-CATTCCATTGGATTC	11039064-TATTT-CATTCCATTGGATTC							***
15278771-T-TTTATA	13166860-T-.						9×TTATA	***
13719069-GGGAGTG-TGGACTC	11563393-GGGAGTG-TGGACTC							***
59019426-A-G	56873279-A-G							***
13488958-G-T	11333282-G-T							***
59020933-C-CT	56874786-C-CT						11×T	***
59024856-T-C	56878709-T-C							***
58975940-C-T	56829793-C-T							***
22267603-A-C	20105717-A-C			DYZ19				***
13459310-CCAT-GCAC	11303634-CCAT-GCAC							***
13459318-TTGCAT-CTCCAC	11303642-TTGCAT-CTCCAC							***
58980567-TTT-CTC	56834420-TTT-CTC							***
22502960-G-C	20341074-G-C			DYZ19				***
58854575-G-T	56736296-C-A							***
22462613-CGTT-AGTA	20300727-CGTT-AGTA			DYZ19				***
58840792-CTT-ATC	56750077-AAG-GAT							***
9345040-C-G	9507431-C-G							***
59009148-CATG-AATGA	56863001-CATG-AATGA							***
58975967-C-T	56829820-C-T							***
58855334-A-G	56735537-T-C							***
22510131-G-A	20348245-G-A			DYZ19				***
28792976-GGAATC-G	26646829-GGAATC-G							***
27521819-T-A	25375672-T-A			P1_Y2				***
3790878-G-GTATATATA	3922837-G-GTATATATA						21×TA	***
16664338-G-T	14552458-G-T							***
13453784-A-C	11298108-A-C							***
13134802-G-T	10624288-G-T							***
13326056-G-A	11170380-G-A							***
13340655-A-G	11184979-A-G							***
13340686-G-A	11185010-G-A							***
13340689-T-G	11185013-T-G							***
13340693-T-C	11185017-T-C							***
13348165-C-A	11192489-C-A							***
13454081-C-A	11298405-C-A							***
10074833-G-T	10237224-G-T							***
13459257-A-T	11303581-A-T							***
13461139-G-A	11305463-G-A							***
13461152-T-A	11305476-T-A							***
13461188-C-T	11305512-C-T							***
13461211-T-A	11305535-T-A							***
13461221-T-C	11305545-T-C							***
13461267-G-A	11305591-G-A							***
10078031-A-T	10240422-A-T							***
10060953-A-C	10223344-A-C							***
13461309-G-C	11305633-G-C							***
9427648-G-A	9590039-G-A							***
8826932-A-C	8958891-A-C							***
8826933-G-C	8958892-G-C							***
9180656-T-C	9343047-T-C							***
9301069-T-G	9463460-T-G							***
9317807-C-T	9480198-C-T							***
9337078-G-C	9499469-G-C							***
9408644-T-C	9571035-T-C							***
9538834-T-C	9701225-T-C			IR3_Prx				***
10055232-T-C	10217623-T-C							***
9604516-C-A	9766907-C-A			IR3_Prx				***
9714210-G-T	9876601-G-T			IR3_Prx				***
9754041-G-T	9916432-G-T							***
9754054-A-T	9916445-A-T							***
9804060-C-T	9966451-C-T							***
9911896-C-A	10074287-C-A							***
10021007-T-C	10183398-T-C							***
10055205-C-T	10217596-C-T							***
13461295-C-T	11305619-C-T							***
13462619-G-A	11306943-G-A							***
8724731-A-C	8856690-A-C							***
15749084-G-A	13637204-G-A							***
14961304-A-G	12849379-A-G							***
15012576-A-G	12900664-A-G							***
15168202-G-T	13056288-G-T							***
15320686-G-A	13208804-G-A							***
15622326-C-A	13510446-C-A							***
15636415-A-C	13524535-A-C							***
15636450-G-C	13524570-G-C							***
15762146-C-T	13650266-C-T							***
14760524-C-A	12648593-C-A							***
15808817-T-A	13696937-T-A							***
15893426-A-T	13781546-A-T							***
16081217-A-T	13969337-A-T							***
16206029-G-A	14094149-G-A							***
16321615-A-G	14209735-A-G							***
16575094-G-T	14463214-G-T							***
16618179-C-A	14506299-C-A							***
14760531-G-T	12648600-G-T							***
14740669-A-T	12628737-A-T							***
13466104-C-T	11310428-C-T							***
13688114-A-G	11532438-A-G							***
13466455-A-G	11310779-A-G							***
13466492-G-C	11310816-G-C							***
13467172-A-G	11311496-A-G							***
13475500-G-C	11319824-G-C							***
13476933-T-C	11321257-T-C							***
13529932-G-T	11374256-G-T							***
13645835-T-C	11490159-T-C							***
13695437-G-A	11539761-G-A							***
14631353-A-G	12519422-A-G							***
13713238-C-T	11557562-C-T							***
13713310-A-G	11557634-A-G							***
13713362-T-G	11557686-T-G							***
13713492-T-A	11557816-T-A							***
14258038-C-G	12137332-C-G							***
14258046-G-T	12137340-G-T							***
14610551-T-C	12498753-T-C							***
14610560-C-T	12498762-C-T							***
8816238-A-G	8948197-A-G							***
8325387-G-A	8457346-G-A							***
19547435-C-A	17435555-C-A							***
5962364-T-A	6094323-T-A							***
13475483-C-G	11319807-C-G							***
13475484-A-G	11319808-A-G							***
13475499-T-G	11319823-T-G							***
13475503-C-T	11319827-C-T							***
13466505-G-C	11310829-G-C							***
13713473-G-A	11557797-G-A		BY50609					***
13461160-C-T	11305484-C-T							***
14258036-A-C	12137330-A-C							***
27570773-G-T	25424626-G-T			P1_Y2				***
22474303-T-G	20312417-T-G		BY28178	DYZ19				***
22346273-C-G	20184387-C-G			DYZ19				***
58912802-C-T	56678069-G-A							***
58855250-C-T	56735621-G-A							***
14290604-A-G	12169898-A-G							***
22510937-C-A	20349051-C-A		BY225705	DYZ19				***
2810540-C-A	2942499-C-A							***
13474369-T-C	11318693-T-C							***
9700889-G-T	9863280-G-T			IR3_Prx				***
3209371-G-T	3341330-G-T							***
13194938-G-A	11039262-G-A							***
58979400-T-G	56833253-T-G							***
19469874-C-T	17357994-C-T		F23724					***
7223283-G-T	7355242-G-T							***
2649553-A-G	2781512-A-G							***
58862793-C-A	56728078-G-T							***
10024378-T-G	10186769-T-G							***
27521769-C-T	25375622-C-T			P1_Y2				***
13475483-CA-GG	11319807-CA-GG							***
21151812-G-T	18989926-G-T							***
22509897-A-C	20348011-A-C		BY177861	DYZ19				***
22510099-C-T	20348213-C-T			DYZ19				***
58975781-T-A	56829634-T-A							***
58975822-C-G	56829675-C-G							***
27521787-G-A	25375640-G-A			P1_Y2				***
27521793-G-A	25375646-G-A			P1_Y2				***
13461122-A-G	11305446-A-G							***
7021799-G-C	7153758-G-C							***
3151538-G-T	3283497-G-T							***
4192553-C-A	4324512-C-A							***
8325385-G-T	8457344-G-T							***
6903358-G-A	7035317-G-A							***
6361341-T-A	6493300-T-A							***
6553221-A-T	6685180-A-T							***
6574044-A-G	6706003-A-G							***
6682419-T-G	6814378-T-G							***
6903315-T-G	7035274-T-G							***
6903323-T-C	7035282-T-C							***
6903357-A-G	7035316-A-G							***
6903376-T-C	7035335-T-C							***
6243415-A-G	6375374-A-G			IR3_Dst				***
6903377-G-A	7035336-G-A							***
7269666-A-C	7401625-A-C							***
7301505-T-C	7433464-T-C							***
7373333-G-C	7505292-G-C							***
7503065-T-C	7635024-T-C			IR1_L				***
7577779-C-A	7709738-C-A							***
8112237-A-C	8244196-A-C							***
6259228-C-A	6391187-C-A			IR3_Dst				***
6232549-T-G	6364508-T-G			IR3_Dst				***
4287041-T-C	4419000-T-C							***
4842355-A-G	4974314-A-G							***
4492944-A-C	4624903-A-C							***
4548209-A-G	4680168-A-G							***
4587111-G-A	4719070-G-A							***
4620957-C-T	4752916-C-T							***
4701053-A-G	4833012-A-G							***
4751582-A-G	4883541-A-G		FT173095					***
4763796-T-C	4895755-T-C		FGC55963					***
5009598-A-T	5141557-A-T							***
6194656-A-C	6326615-A-C			IR3_Dst				***
5094103-A-G	5226062-A-G							***
5235487-G-T	5367446-G-T							***
5261541-C-A	5393500-C-A							***
5572511-G-A	5704470-G-A							***
5962322-T-C	6094281-T-C							***
6093484-G-A	6225443-G-A							***
6112635-G-T	6244594-G-T							***
6182035-A-G	6313994-A-G			IR3_Dst				***
59020046-CG-GA	56873899-CG-GA							***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

	All	McDonald	YFull
Kit: 7VXNN	16230711	9578091	8413984
Used in age calculations	16230711	9578091	8413984
Counts of SNPs		4	4

Variant counts last updated 2021-01-12 03:21:41.

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