O'Brien
BigY3: 732728, BigY2: 732728MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 732728 | BigY2 732728 |
---|---|---|---|---|---|---|---|---|
hg19:Y:19284019-G-C hg38:Y:17172139-G-C | CTS10136 | Y | Y | 10×TATGC | A* | *** | ||
hg38:Y:56836357-C-T | A* | |||||||
hg19:Y:20717100-G-GA hg38:Y:18555214-G-GA | P4_Prx | 10×A | A* | |||||
hg19:Y:6343890-T-C hg38:Y:6475849-T-C | A* | A* | ||||||
hg38:Y:56836427-C-T | A* | |||||||
hg19:Y:22977543-C-A hg38:Y:20815657-C-A | PF4934 | Y | Y | + | ** | |||
hg19:Y:2794164-A-G hg38:Y:2926123-A-G | BY56429 | Y | Y | + | + | |||
hg19:Y:6802750-T-C hg38:Y:6934709-T-C | BY61408 | Y | Y | + | + | |||
hg38:Y:10782254-A-T | FT430970 | + | ** | |||||
hg19:Y:14317569-G-T hg38:Y:12196863-G-T | BY94785 | Y | Y | + | + | |||
hg19:Y:15911323-G-A hg38:Y:13799443-G-A | BY104870 | Y | Y | + | + | |||
hg19:Y:17335169-G-A hg38:Y:15223289-G-A | BY113927 | Y | Y | + | + | |||
hg19:Y:18871239-A-G hg38:Y:16759359-A-G | BY124416 | Y | Y | + | + | |||
hg19:Y:19262820-A-G hg38:Y:17150940-A-G | BY127751 | Y | Y | + | + | |||
hg19:Y:19829535-G-A hg38:Y:17717655-G-A | BY211982 | P5_Prx | + | + | ||||
hg19:Y:22561470-A-G hg38:Y:20399584-A-G | Y | Y | + | ** | ||||
hg19:Y:5122165-G-C hg38:Y:5254124-G-C | FT120885 | + | ||||||
hg19:Y:5122253-T-C hg38:Y:5254212-T-C | FT120886 | + | ||||||
hg38:Y:10782600-A-T | FT430985 | + | ||||||
hg38:Y:10830408-ATCCAC-A | + | |||||||
hg19:Y:13823517-AAATGG-A hg38:Y:11702811-AAATGG-A | DYZ17 | 6×AATGG | * | * | ||||
hg19:Y:21853770-A-AT hg38:Y:19691884-A-AT | 8×T | ** | ||||||
hg19:Y:16605040-C-A hg38:Y:14493160-C-A | ** | |||||||
hg19:Y:25709418-G-T hg38:Y:23563271-G-T | P1_b3 | ** | ||||||
hg19:Y:9416722-C-T hg38:Y:9579113-C-T | ** | |||||||
hg19:Y:9416710-C-T hg38:Y:9579101-C-T | ** | |||||||
hg19:Y:9416716-C-T hg38:Y:9579107-C-T | ** | |||||||
hg19:Y:6444869-CAT-C hg38:Y:6576828-CAT-C | ** | |||||||
hg19:Y:13859410-G-C hg38:Y:11738704-G-C | DYZ17 | ** | ||||||
hg19:Y:17923793-G-A hg38:Y:15811913-G-A | A4948 | ** | ||||||
hg19:Y:18963618-C-CATAAA hg38:Y:16851738-C-CATAAA | 5×ATAAA | ** | ||||||
hg19:Y:58981342-A-T hg38:Y:56835195-A-T | ** | |||||||
hg19:Y:13859401-A-C hg38:Y:11738695-A-C | DYZ17 | ** | ||||||
hg19:Y:2855486-A-T hg38:Y:2987445-A-T | ** | |||||||
hg19:Y:58981347-A-G hg38:Y:56835200-A-G | ** | |||||||
hg19:Y:58856006-C-T hg38:Y:56734865-G-A | ** | |||||||
hg19:Y:14910798-ATTTT-A hg38:Y:12798865-ATTTT-A | 21×T | ** | ||||||
hg19:Y:21785991-C-A hg38:Y:19624105-C-A | ** | |||||||
hg38:Y:10794242-T-C | ** | |||||||
hg38:Y:10794250-A-T | ** | |||||||
hg38:Y:10671027-A-G | ** | |||||||
hg38:Y:10760372-C-T | ** | |||||||
hg38:Y:10760377-T-A | ** | |||||||
hg38:Y:10746964-A-T | ** | |||||||
hg38:Y:11020115-C-G | ** | |||||||
hg38:Y:11020136-C-T | ** | |||||||
hg38:Y:11020158-T-C | ** | |||||||
hg38:Y:10747020-T-G | ** | |||||||
hg38:Y:10926589-CTG-C | ** | |||||||
hg38:Y:10952449-C-T | ** | |||||||
hg38:Y:10952474-C-G | ** | |||||||
hg38:Y:10952502-T-C | ** | |||||||
hg19:Y:19609383-T-G hg38:Y:17497503-T-G | P5_Prx | ** | ||||||
hg19:Y:22484643-T-A hg38:Y:20322757-T-A | DYZ19 | ** | ||||||
hg19:Y:7116193-C-A hg38:Y:7248152-C-A | ** | |||||||
hg38:Y:10826877-T-C | ** | |||||||
hg38:Y:10826881-T-C | ** | |||||||
hg19:Y:2845260-G-A hg38:Y:2977219-G-A | ** | |||||||
hg19:Y:28798701-C-A hg38:Y:26652554-C-A | 4×TGGAA | ** | ||||||
hg38:Y:10906157-T-A | ** | |||||||
hg19:Y:28532829-C-A hg38:Y:26386682-C-A | ** | |||||||
hg38:Y:10790213-T-A | ** | |||||||
hg38:Y:10753598-C-A | ** | |||||||
hg19:Y:17143891-ATTTTT-A hg38:Y:15032011-ATTTTT-A | 35×T | ** | ||||||
hg19:Y:14698458-CAAA-C hg38:Y:12586524-CAAA-C | 19×A | ** | ||||||
hg38:Y:10763048-C-A | ** | |||||||
hg38:Y:11020162-A-T | ** | |||||||
hg38:Y:10859660-T-C | ** | |||||||
hg19:Y:13859407-A-T hg38:Y:11738701-A-T | DYZ17 | ** | ||||||
hg19:Y:15323455-AAT-A hg38:Y:13211573-AAT-A | ** | |||||||
hg38:Y:10760414-C-T | ** | |||||||
hg38:Y:10983315-C-A | ** | |||||||
hg38:Y:10983341-C-G | ** | |||||||
hg38:Y:10937393-T-G | ** | |||||||
hg19:Y:14502618-A-AT hg38:Y:12390823-A-AT | 10×T | ** | ||||||
hg19:Y:4133871-C-A hg38:Y:4265830-C-A | ** | |||||||
hg19:Y:16354869-C-A hg38:Y:14242989-C-A | 13×A | ** | ||||||
hg19:Y:14059318-C-A hg38:Y:11938612-C-A | ** | |||||||
hg38:Y:10759317-C-G | ** | |||||||
hg38:Y:10869981-C-G | ** | |||||||
hg38:Y:10851903-C-A | ** | |||||||
hg38:Y:10940331-C-A | ** | |||||||
hg38:Y:10876012-T-A | ** | |||||||
hg38:Y:10970654-C-T | FGC78676 | ** | ||||||
hg38:Y:10774718-C-T | ** | |||||||
hg38:Y:10939589-C-T | ** | |||||||
hg38:Y:10859639-C-G | ** | |||||||
hg19:Y:21435395-A-G hg38:Y:19273509-A-G | ** | |||||||
hg38:Y:10747014-A-AT | ** | |||||||
hg38:Y:10747017-C-CACTG | ** | |||||||
hg19:Y:22660391-C-A hg38:Y:20498505-C-A | ** | |||||||
hg38:Y:10755329-T-C | ** | |||||||
hg19:Y:17323732-G-T hg38:Y:15211852-G-T | ** | |||||||
hg19:Y:8389605-C-A hg38:Y:8521564-C-A | ** | |||||||
hg38:Y:10770594-A-T | ** | |||||||
hg38:Y:10770607-C-T | ** | |||||||
hg38:Y:10770608-C-T | ** | |||||||
hg38:Y:11015895-T-C | ** | |||||||
hg19:Y:23633371-CTTTTTT-C hg38:Y:21471485-CTTTTTT-C | 21×T | ** | ||||||
hg19:Y:20771716-A-AC hg38:Y:18609830-A-AC | P4_Prx | ** | ||||||
hg19:Y:28612092-C-A hg38:Y:26465945-C-A | ** | |||||||
hg19:Y:9636623-TG-T hg38:Y:9799014-TG-T | IR3_Prx | ** | ||||||
hg38:Y:10760718-C-T | ** | |||||||
hg38:Y:10981080-C-A | ** | |||||||
hg19:Y:22352465-A-T hg38:Y:20190579-A-T | DYZ19 | ** | ||||||
hg19:Y:21934612-T-G hg38:Y:19772726-T-G | ** | |||||||
hg38:Y:11004443-T-A | ** | |||||||
hg38:Y:10813038-G-GCAAAC | ** | |||||||
hg38:Y:10991241-A-G | ** | |||||||
hg19:Y:4075831-G-T hg38:Y:4207790-G-T | ** | |||||||
hg38:Y:10924236-C-A | ** | |||||||
hg19:Y:16354867-G-T hg38:Y:14242987-G-T | ** | |||||||
hg38:Y:10869967-C-CGGAAG | ** | |||||||
hg38:Y:10906153-G-T | ** | |||||||
hg38:Y:10945233-A-C | ** | |||||||
hg19:Y:13462270-AC-A hg38:Y:11306594-AC-A | ** | |||||||
hg19:Y:17584154-TTTG-T hg38:Y:15472274-TTTG-T | ** | |||||||
hg19:Y:17426368-C-A hg38:Y:15314488-C-A | ** | |||||||
hg38:Y:10764589-C-CCATG | ** | |||||||
hg19:Y:14097971-A-T hg38:Y:11977265-A-T | ** | |||||||
hg19:Y:20485919-A-AC hg38:Y:18324033-A-AC | P5_Dst | ** | ||||||
hg19:Y:19298984-C-A hg38:Y:17187104-C-A | ** | |||||||
hg38:Y:10747006-T-A | ** | |||||||
hg19:Y:4538607-A-C hg38:Y:4670566-A-C | ** | |||||||
hg19:Y:28805887-G-A hg38:Y:26659740-G-A | ** | |||||||
hg19:Y:20989135-A-T hg38:Y:18827249-A-T | P4_Dst | ** | ||||||
hg38:Y:10761142-C-T | ** | |||||||
hg19:Y:15158793-CAAA-C hg38:Y:13046879-CAAA-C | 12×A | ** | ||||||
hg38:Y:11024403-C-T | ** | |||||||
hg19:Y:16047913-C-A hg38:Y:13936033-C-A | ** | |||||||
hg19:Y:4769235-C-A hg38:Y:4901194-C-A | ** | |||||||
hg19:Y:7216482-TTTA-T hg38:Y:7348441-TTTA-T | 5×TTA | ** | ||||||
hg19:Y:7184897-C-A hg38:Y:7316856-C-A | ** | |||||||
hg19:Y:7042927-C-A hg38:Y:7174886-C-A | ** | |||||||
hg38:Y:11646228-G-T | DYZ17 | ** | ||||||
hg38:Y:10870009-C-T | ** | |||||||
hg19:Y:28818163-A-T hg38:Y:26672016-A-T | ** | |||||||
hg19:Y:28485905-T-G hg38:Y:26339758-T-G | ** | |||||||
hg38:Y:10939584-C-T | ** | |||||||
hg38:Y:10766524-T-C | ** | |||||||
hg38:Y:10687441-C-T | ** | |||||||
hg38:Y:10946193-C-A | ** | |||||||
hg19:Y:13854921-G-GA hg38:Y:11734215-G-GA | DYZ17 | 8×A | ** | |||||
hg19:Y:13928309-C-A hg38:Y:11807603-C-A | ** | |||||||
hg38:Y:10950936-C-A | ** | |||||||
hg38:Y:10926678-C-T | ** | |||||||
hg38:Y:10814517-C-A | ** | |||||||
hg19:Y:6523177-C-A hg38:Y:6655136-C-A | ** | |||||||
hg19:Y:19597198-ATTAT-A hg38:Y:17485318-ATTAT-A | P5_Prx | ** | ||||||
hg38:Y:10662146-G-C | ** | |||||||
hg19:Y:16354869-C-CAA hg38:Y:14242989-C-CAA | 13×A | ** | ||||||
hg19:Y:18546984-C-A hg38:Y:16435104-C-A | ** | |||||||
hg38:Y:10755391-CAT-C | ** | |||||||
hg19:Y:15289057-C-A hg38:Y:13177156-C-A | ** | |||||||
hg38:Y:10983515-CCATGGCACTG-C | ** | |||||||
hg38:Y:10983555-T-A | ** | |||||||
hg38:Y:56846938-T-C | ** | |||||||
hg19:Y:3850158-C-A hg38:Y:3982117-C-A | ** | |||||||
hg19:Y:18071864-T-TA hg38:Y:15959984-T-TA | 8×A | ** | ||||||
hg19:Y:28798105-G-A hg38:Y:26651958-G-A | ** | |||||||
hg38:Y:10654140-C-A | ** | |||||||
hg38:Y:10958581-C-T | ** | |||||||
hg19:Y:21283451-C-A hg38:Y:19121565-C-A | ** | |||||||
hg19:Y:24432872-G-T hg38:Y:22286725-G-T | ** | |||||||
hg19:Y:22215296-C-A hg38:Y:20053410-C-A | ** | |||||||
hg19:Y:13462325-C-T hg38:Y:11306649-C-T | ** | |||||||
hg38:Y:10655588-C-T | FGC78866 | ** | ||||||
hg19:Y:9030390-A-G hg38:Y:9192781-A-G | ** | |||||||
hg19:Y:23773613-C-A hg38:Y:21611727-C-A | ** | |||||||
hg19:Y:14461248-C-A hg38:Y:12340521-C-A | ** | |||||||
hg38:Y:10928090-T-C | ** | |||||||
hg38:Y:10928095-C-T | ** | |||||||
hg38:Y:10928098-T-C | ** | |||||||
hg38:Y:10928099-C-T | ** | |||||||
hg19:Y:4448977-C-A hg38:Y:4580936-C-A | ** | |||||||
hg19:Y:9964467-C-A hg38:Y:10126858-C-A | ** | |||||||
hg19:Y:15866088-T-A hg38:Y:13754208-T-A | ** | |||||||
hg19:Y:14176474-C-A hg38:Y:12055768-C-A | ** | |||||||
hg19:Y:15700397-G-GAA hg38:Y:13588517-G-GAA | 9×A | ** | ||||||
hg38:Y:10793151-G-T | ** | |||||||
hg19:Y:18780323-C-A hg38:Y:16668443-C-A | ** | |||||||
hg38:Y:11674754-G-T | DYZ17 | ** | ||||||
hg19:Y:13321927-C-A hg38:Y:11166251-C-A | ** | |||||||
hg19:Y:28751325-A-G hg38:Y:26605178-A-G | ** | |||||||
hg38:Y:10999701-C-A | ** | |||||||
hg19:Y:4548047-T-G hg38:Y:4680006-T-G | ** | |||||||
hg38:Y:56724862-T-C | ** | |||||||
hg38:Y:10983042-C-A | FT439136 | ** | ||||||
hg38:Y:10686543-TTGCAC-T | ** | |||||||
hg19:Y:14992462-G-T hg38:Y:12880547-G-T | ** | |||||||
hg19:Y:21012251-G-T hg38:Y:18850365-G-T | P4_Dst | ** | ||||||
hg19:Y:28818193-A-T hg38:Y:26672046-A-T | ** | |||||||
hg38:Y:10834863-G-T | ** | |||||||
hg38:Y:11024408-C-T | ** | |||||||
hg19:Y:3164572-C-A hg38:Y:3296531-C-A | ** | |||||||
hg38:Y:10906147-C-G | ** | |||||||
hg38:Y:10906186-G-T | ** | |||||||
hg38:Y:10766504-T-G | ** | |||||||
hg19:Y:15635955-C-A hg38:Y:13524075-C-A | ** | |||||||
hg19:Y:23204423-C-A hg38:Y:21042537-C-A | ** | |||||||
hg19:Y:16060650-C-A hg38:Y:13948770-C-A | ** | |||||||
hg38:Y:10906107-G-C | ** | |||||||
hg38:Y:10906112-C-A | ** | |||||||
hg38:Y:10906132-C-G | ** | |||||||
hg38:Y:10906170-G-T | ** | |||||||
hg38:Y:10900068-G-T | ** | |||||||
hg38:Y:11013948-C-CTCTTT | ** | |||||||
hg38:Y:11013958-C-T | ** | |||||||
hg19:Y:10013956-C-A hg38:Y:10176347-C-A | ** | |||||||
hg38:Y:10790214-C-A | ** | |||||||
hg38:Y:56724851-A-T | ** | |||||||
hg38:Y:10792314-C-A | FT431399 | ** | ||||||
hg19:Y:4936995-C-A hg38:Y:5068954-C-A | ** | |||||||
hg19:Y:13988842-C-A hg38:Y:11868136-C-A | ** | |||||||
hg38:Y:10983596-C-T | ** | |||||||
hg38:Y:10834848-T-C | ** | |||||||
hg19:Y:6310859-AC-A hg38:Y:6442818-AC-A | IR3_Dst | ** | ||||||
hg19:Y:13430480-C-A hg38:Y:11274804-C-A | ** | |||||||
hg38:Y:10781251-C-CACTAT | ** | |||||||
hg38:Y:11034848-CCATTCCATTCCATGA-C | ** | |||||||
hg19:Y:21994056-C-A hg38:Y:19832170-C-A | ** | |||||||
hg19:Y:7090768-C-A hg38:Y:7222727-C-A | ** | |||||||
hg38:Y:11013967-C-T | ** | |||||||
hg38:Y:10995840-A-G | ** | |||||||
hg38:Y:10658159-C-A | ** | |||||||
hg38:Y:10662142-C-A | ** | |||||||
hg38:Y:10946826-C-A | ** | |||||||
hg19:Y:17146505-C-A hg38:Y:15034625-C-A | ** | |||||||
hg19:Y:3688406-C-A hg38:Y:3820365-C-A | ** | |||||||
hg19:Y:17280030-C-A hg38:Y:15168150-C-A | ** | |||||||
hg19:Y:6784568-C-A hg38:Y:6916527-C-A | ** | |||||||
hg19:Y:3179039-C-A hg38:Y:3310998-C-A | ** | |||||||
hg19:Y:3506212-C-A hg38:Y:3638171-C-A | ** | |||||||
hg19:Y:3606441-G-T hg38:Y:3738400-G-T | ** | |||||||
hg19:Y:3606544-C-A hg38:Y:3738503-C-A | ** | |||||||
hg19:Y:3620894-G-T hg38:Y:3752853-G-T | ** | |||||||
hg19:Y:3704836-T-A hg38:Y:3836795-T-A | ** | |||||||
hg19:Y:3865565-A-C hg38:Y:3997524-A-C | ** | |||||||
hg19:Y:3877832-G-T hg38:Y:4009791-G-T | FT308088 | ** | ||||||
hg19:Y:4034779-G-T hg38:Y:4166738-G-T | ** | |||||||
hg19:Y:4108253-T-C hg38:Y:4240212-T-C | ** | |||||||
hg19:Y:4257800-C-A hg38:Y:4389759-C-A | ** | |||||||
hg19:Y:4272466-C-A hg38:Y:4404425-C-A | ** | |||||||
hg19:Y:4357573-C-A hg38:Y:4489532-C-A | ** | |||||||
hg19:Y:4548069-A-C hg38:Y:4680028-A-C | ** | |||||||
hg19:Y:5035769-G-T hg38:Y:5167728-G-T | ** | |||||||
hg19:Y:5114102-C-A hg38:Y:5246061-C-A | ** | |||||||
hg19:Y:5189619-C-T hg38:Y:5321578-C-T | ** | |||||||
hg19:Y:5200228-C-A hg38:Y:5332187-C-A | ** | |||||||
hg19:Y:5264436-C-T hg38:Y:5396395-C-T | FT241556 | ** | ||||||
hg19:Y:5685615-G-T hg38:Y:5817574-G-T | FT84700 | ** | ||||||
hg19:Y:5926918-G-T hg38:Y:6058877-G-T | ** | |||||||
hg19:Y:6147714-C-A hg38:Y:6279673-C-A | IR3_Dst | ** | ||||||
hg19:Y:6222977-T-G hg38:Y:6354936-T-G | IR3_Dst | ** | ||||||
hg19:Y:6305902-A-C hg38:Y:6437861-A-C | IR3_Dst | ** | ||||||
hg19:Y:6330226-ACAC-A hg38:Y:6462185-ACAC-A | IR3_Dst | ** | ||||||
hg19:Y:6365095-T-G hg38:Y:6497054-T-G | ** | |||||||
hg19:Y:6435078-C-A hg38:Y:6567037-C-A | FTB31429 | ** | ||||||
hg19:Y:6534441-C-A hg38:Y:6666400-C-A | ** | |||||||
hg19:Y:6720430-G-T hg38:Y:6852389-G-T | ** | |||||||
hg19:Y:6916046-C-A hg38:Y:7048005-C-A | ** | |||||||
hg19:Y:7041871-G-A hg38:Y:7173830-G-A | ** | |||||||
hg19:Y:7131344-A-G hg38:Y:7263303-A-G | ** | |||||||
hg19:Y:7180006-C-T hg38:Y:7311965-C-T | ** | |||||||
hg19:Y:7186246-A-C hg38:Y:7318205-A-C | ** | |||||||
hg19:Y:7225648-G-T hg38:Y:7357607-G-T | ** | |||||||
hg19:Y:7231479-T-G hg38:Y:7363438-T-G | ** | |||||||
hg19:Y:7237897-A-C hg38:Y:7369856-A-C | ** | |||||||
hg19:Y:7255953-G-T hg38:Y:7387912-G-T | ** | |||||||
hg19:Y:7311636-C-T hg38:Y:7443595-C-T | ** | |||||||
hg19:Y:7319298-C-A hg38:Y:7451257-C-A | ** | |||||||
hg19:Y:7385783-A-C hg38:Y:7517742-A-C | ** | |||||||
hg19:Y:7416602-A-C hg38:Y:7548561-A-C | ** | |||||||
hg19:Y:8713050-C-A hg38:Y:8845009-C-A | ** | |||||||
hg19:Y:8734362-C-A hg38:Y:8866321-C-A | ** | |||||||
hg19:Y:8973620-T-C hg38:Y:9136011-T-C | ** | |||||||
hg19:Y:9498953-A-C hg38:Y:9661344-A-C | ** | |||||||
hg19:Y:9513681-C-A hg38:Y:9676072-C-A | ** | |||||||
hg19:Y:9524064-C-A hg38:Y:9686455-C-A | Y48434 | ** | ||||||
hg19:Y:9605204-G-T hg38:Y:9767595-G-T | IR3_Prx | ** | ||||||
hg19:Y:9929388-C-T hg38:Y:10091779-C-T | ** | |||||||
hg19:Y:9936474-C-A hg38:Y:10098865-C-A | ** | |||||||
hg19:Y:9945631-C-A hg38:Y:10108022-C-A | ** | |||||||
hg19:Y:9952466-C-A hg38:Y:10114857-C-A | ** | |||||||
hg19:Y:9986055-C-A hg38:Y:10148446-C-A | ** | |||||||
hg38:Y:10655589-C-G | ** | |||||||
hg38:Y:10655612-C-T | ** | |||||||
hg38:Y:10749720-G-T | ** | |||||||
hg38:Y:10750565-T-G | ** | |||||||
hg38:Y:10758388-C-A | ** | |||||||
hg38:Y:10766199-C-A | ** | |||||||
hg38:Y:10766532-C-A | ** | |||||||
hg38:Y:10769682-C-A | ** | |||||||
hg38:Y:10781267-T-G | ** | |||||||
hg38:Y:10783061-C-A | ** | |||||||
hg38:Y:10786989-G-T | ** | |||||||
hg38:Y:10790903-C-A | ** | |||||||
hg38:Y:10795476-C-A | ** | |||||||
hg38:Y:10803472-A-T | ** | |||||||
hg38:Y:10817776-G-T | ** | |||||||
hg38:Y:10818896-C-A | ** | |||||||
hg38:Y:10834823-T-C | ** | |||||||
hg38:Y:10861126-C-A | ** | |||||||
hg38:Y:10863207-TTTCCA-T | ** | |||||||
hg38:Y:10869982-C-G | ** | |||||||
hg38:Y:10870744-G-T | ** | |||||||
hg38:Y:10883891-C-A | ** | |||||||
hg38:Y:10899032-T-A | ** | |||||||
hg38:Y:10899925-GCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTC-G | ** | |||||||
hg38:Y:10902522-C-A | ** | |||||||
hg38:Y:10906182-C-G | ** | |||||||
hg38:Y:10911178-G-T | ** | |||||||
hg38:Y:10935562-C-CAATAT | ** | |||||||
hg38:Y:10937946-G-T | ** | |||||||
hg38:Y:10942666-C-A | ** | |||||||
hg38:Y:10942672-C-T | ** | |||||||
hg38:Y:10942676-C-G | ** | |||||||
hg38:Y:10945176-C-G | ** | |||||||
hg38:Y:10945180-C-CCATTA | ** | |||||||
hg38:Y:10951538-C-A | ** | |||||||
hg38:Y:10967520-T-TG | ** | |||||||
hg38:Y:10973087-C-A | ** | |||||||
hg38:Y:10984941-T-G | ** | |||||||
hg38:Y:10989042-C-A | FT92182 | ** | ||||||
hg38:Y:10991549-T-G | ** | |||||||
hg38:Y:10992837-C-A | ** | |||||||
hg38:Y:10997380-C-A | ** | |||||||
hg38:Y:10998616-C-A | ** | |||||||
hg38:Y:11011741-C-A | ** | |||||||
hg38:Y:11014526-C-G | ** | |||||||
hg38:Y:11033988-T-G | ** | |||||||
hg19:Y:13213979-T-G hg38:Y:11058303-T-G | ** | |||||||
hg19:Y:13235488-C-A hg38:Y:11079812-C-A | ** | |||||||
hg19:Y:13255255-C-A hg38:Y:11099579-C-A | ** | |||||||
hg19:Y:13319566-C-A hg38:Y:11163890-C-A | ** | |||||||
hg19:Y:13351021-C-T hg38:Y:11195345-C-T | ** | |||||||
hg19:Y:13351030-CCA-C hg38:Y:11195354-CCA-C | ** | |||||||
hg19:Y:13409864-C-A hg38:Y:11254188-C-A | ** | |||||||
hg19:Y:13421708-C-A hg38:Y:11266032-C-A | ** | |||||||
hg19:Y:13446523-T-A hg38:Y:11290847-T-A | ** | |||||||
hg19:Y:13624217-G-T hg38:Y:11468541-G-T | ** | |||||||
hg38:Y:11644885-A-G | DYZ17 | ** | ||||||
hg19:Y:13891657-C-A hg38:Y:11770951-C-A | Y4552 F11230 FGC16369 | ** | ||||||
hg19:Y:13928951-C-A hg38:Y:11808245-C-A | ** | |||||||
hg19:Y:14051897-C-A hg38:Y:11931191-C-A | ** | |||||||
hg19:Y:14052067-G-A hg38:Y:11931361-G-A | ** | |||||||
hg19:Y:14069115-C-A hg38:Y:11948409-C-A | ** | |||||||
hg19:Y:14097986-A-T hg38:Y:11977280-A-T | ** | |||||||
hg19:Y:14272473-A-C hg38:Y:12151767-A-C | ** | |||||||
hg19:Y:14312217-C-A hg38:Y:12191511-C-A | ** | |||||||
hg19:Y:14367884-A-T hg38:Y:12247180-A-T | ** | |||||||
hg19:Y:14464313-C-A hg38:Y:12343586-C-A | ** | |||||||
hg19:Y:14470407-G-A hg38:Y:12349676-G-A | ** | |||||||
hg19:Y:14964194-G-T hg38:Y:12852269-G-T | ** | |||||||
hg19:Y:15049429-C-A hg38:Y:12937520-C-A | ** | |||||||
hg19:Y:15150686-C-A hg38:Y:13038773-C-A | ** | |||||||
hg19:Y:15170620-GT-G hg38:Y:13058706-GT-G | ** | |||||||
hg19:Y:15178408-A-C hg38:Y:13066494-A-C | ** | |||||||
hg19:Y:15379399-C-A hg38:Y:13267519-C-A | ** | |||||||
hg19:Y:15401286-C-A hg38:Y:13289406-C-A | ** | |||||||
hg19:Y:15412296-A-G hg38:Y:13300416-A-G | ** | |||||||
hg19:Y:15475197-CTGA-C hg38:Y:13363317-CTGA-C | ** | |||||||
hg19:Y:15642886-C-A hg38:Y:13531006-C-A | ** | |||||||
hg19:Y:16001307-C-A hg38:Y:13889427-C-A | ** | |||||||
hg19:Y:16007960-A-G hg38:Y:13896080-A-G | ** | |||||||
hg19:Y:16048029-C-A hg38:Y:13936149-C-A | ** | |||||||
hg19:Y:16084223-G-A hg38:Y:13972343-G-A | ** | |||||||
hg19:Y:16484320-C-A hg38:Y:14372440-C-A | ** | |||||||
hg19:Y:16721874-G-A hg38:Y:14609994-G-A | ** | |||||||
hg19:Y:17175455-G-T hg38:Y:15063575-G-T | ** | |||||||
hg19:Y:17203387-C-G hg38:Y:15091507-C-G | ** | |||||||
hg19:Y:17211393-A-C hg38:Y:15099513-A-C | ** | |||||||
hg19:Y:17374551-G-T hg38:Y:15262671-G-T | ** | |||||||
hg19:Y:17618200-A-C hg38:Y:15506320-A-C | ** | |||||||
hg19:Y:17778056-T-A hg38:Y:15666176-T-A | ** | |||||||
hg19:Y:17867560-G-T hg38:Y:15755680-G-T | ** | |||||||
hg19:Y:18159826-C-A hg38:Y:16047946-C-A | ** | |||||||
hg19:Y:18204990-A-T hg38:Y:16093110-A-T | ** | |||||||
hg19:Y:18549346-A-T hg38:Y:16437466-A-T | ** | |||||||
hg19:Y:18707290-C-A hg38:Y:16595410-C-A | ** | |||||||
hg19:Y:18904901-C-A hg38:Y:16793021-C-A | ** | |||||||
hg19:Y:19060126-A-T hg38:Y:16948246-A-T | ** | |||||||
hg19:Y:19178602-T-G hg38:Y:17066722-T-G | ** | |||||||
hg19:Y:19252036-T-G hg38:Y:17140156-T-G | ** | |||||||
hg19:Y:19424975-A-T hg38:Y:17313095-A-T | ** | |||||||
hg19:Y:19509869-A-T hg38:Y:17397989-A-T | ** | |||||||
hg19:Y:19663394-T-A hg38:Y:17551514-T-A | P5_Prx | ** | ||||||
hg19:Y:19693470-T-C hg38:Y:17581590-T-C | P5_Prx | ** | ||||||
hg19:Y:19746885-GTGT-G hg38:Y:17635005-GTGT-G | P5_Prx | ** | ||||||
hg19:Y:19753870-A-C hg38:Y:17641990-A-C | P5_Prx | ** | ||||||
hg19:Y:19753877-T-G hg38:Y:17641997-T-G | P5_Prx | ** | ||||||
hg19:Y:19770256-T-C hg38:Y:17658376-T-C | P5_Prx | ** | ||||||
hg19:Y:19770257-G-A hg38:Y:17658377-G-A | P5_Prx | ** | ||||||
hg19:Y:19770264-T-G hg38:Y:17658384-T-G | P5_Prx | ** | ||||||
hg19:Y:20655050-G-GTA hg38:Y:18493164-G-GTA | P4_Prx | ** | ||||||
hg19:Y:20662958-T-C hg38:Y:18501072-T-C | P4_Prx | ** | ||||||
hg19:Y:20771701-A-C hg38:Y:18609815-A-C | P4_Prx | ** | ||||||
hg19:Y:20790125-T-G hg38:Y:18628239-T-G | P4_Prx | ** | ||||||
hg19:Y:20790143-T-G hg38:Y:18628257-T-G | P4_Prx | ** | ||||||
hg19:Y:20790160-A-C hg38:Y:18628274-A-C | P4_Prx | ** | ||||||
hg19:Y:21109059-A-C hg38:Y:18947173-A-C | ** | |||||||
hg19:Y:21295251-TCTG-T hg38:Y:19133365-TCTG-T | ** | |||||||
hg19:Y:21455521-C-A hg38:Y:19293635-C-A | FTA41313 | ** | ||||||
hg19:Y:21596525-C-A hg38:Y:19434639-C-A | ** | |||||||
hg19:Y:21940851-C-A hg38:Y:19778965-C-A | ** | |||||||
hg19:Y:22097166-G-T hg38:Y:19935280-G-T | ** | |||||||
hg19:Y:22183074-C-A hg38:Y:20021188-C-A | ** | |||||||
hg19:Y:22252164-T-C hg38:Y:20090278-T-C | DYZ19 | ** | ||||||
hg19:Y:22633926-C-A hg38:Y:20472040-C-A | ** | |||||||
hg19:Y:22994783-C-A hg38:Y:20832897-C-A | ** | |||||||
hg19:Y:23142388-A-C hg38:Y:20980502-A-C | ** | |||||||
hg19:Y:23363907-C-A hg38:Y:21202021-C-A | ** | |||||||
hg19:Y:23397225-A-G hg38:Y:21235339-A-G | ** | |||||||
hg19:Y:23475544-T-A hg38:Y:21313658-T-A | ** | |||||||
hg19:Y:24220981-C-A hg38:Y:22074834-C-A | P3_b1 | ** | ||||||
hg19:Y:27808435-T-G hg38:Y:25662288-T-G | P1_Y2 | ** | ||||||
hg19:Y:28484307-C-A hg38:Y:26338160-C-A | ** | |||||||
hg19:Y:28556225-T-G hg38:Y:26410078-T-G | ** | |||||||
hg19:Y:28656306-C-A hg38:Y:26510159-C-A | ** | |||||||
hg19:Y:28659734-T-C hg38:Y:26513587-T-C | ** | |||||||
hg19:Y:28694409-G-T hg38:Y:26548262-G-T | ** | |||||||
hg19:Y:28781501-C-A hg38:Y:26635354-C-A | ** | |||||||
hg19:Y:28798102-A-G hg38:Y:26651955-A-G | ** | |||||||
hg19:Y:28798125-G-C hg38:Y:26651978-G-C | ** | |||||||
hg38:Y:56714075-T-C | ** | |||||||
hg19:Y:13222409-AAGGGAGGCACTGAG-A hg38:Y:11066733-AAGGGAGGCACTGAG-A | ** | |||||||
hg19:Y:5066184-C-CTT hg38:Y:5198143-C-CTT | 22×T | ** | ||||||
hg38:Y:56714067-G-T | ** | |||||||
hg19:Y:3584950-A-G hg38:Y:3716909-A-G | ** | |||||||
hg19:Y:3755202-AT-A hg38:Y:3887161-AT-A | ** | |||||||
hg19:Y:10092937-A-C hg38:Y:10255328-A-C | ** | |||||||
hg19:Y:13455822-T-A hg38:Y:11300146-T-A | ** | |||||||
hg19:Y:13455842-T-A hg38:Y:11300166-T-A | ** | |||||||
hg19:Y:13455869-G-A hg38:Y:11300193-G-A | BY156163 | ** | ||||||
hg19:Y:13455871-G-A hg38:Y:11300195-G-A | ** | |||||||
hg19:Y:13455873-C-G hg38:Y:11300197-C-G | ** | |||||||
hg19:Y:14123758-TA-T hg38:Y:12003052-TA-T | ** | |||||||
hg19:Y:24387084-A-G hg38:Y:22240937-A-G | ** | |||||||
hg19:Y:24461865-A-G hg38:Y:22315718-A-G | ** | |||||||
hg38:Y:56714090-T-TGGTATCATCC | ** | |||||||
hg19:Y:17175161-G-T hg38:Y:15063281-G-T | *** | |||||||
hg19:Y:3107332-A-C hg38:Y:3239291-A-C | *** | |||||||
hg19:Y:4780161-C-CA hg38:Y:4912120-C-CA | 10×A | *** | ||||||
hg19:Y:19284019-G-GTATGC hg38:Y:17172139-G-GTATGC | 10×TATGC | *** | ||||||
hg19:Y:14324537-A-AAAAAT hg38:Y:12203831-A-AAAAAT | 5×AAAAT | *** | ||||||
hg19:Y:19469845-T-TTC hg38:Y:17357965-T-TTC | 14×TC | *** | ||||||
hg19:Y:18758810-TTTTTC-T hg38:Y:16646930-TTTTTC-T | 5×TTTTC | *** | ||||||
hg19:Y:13461041-G-A hg38:Y:11305365-G-A | *** | |||||||
hg19:Y:23471038-CAA-C,CA hg38:Y:21309152-CAA-C,CA | 19×A | *** | ||||||
hg38:Y:10796685-T-G | *** | |||||||
hg38:Y:10796687-C-A | *** | |||||||
hg38:Y:10790281-T-C | *** | |||||||
hg38:Y:10808592-A-T | *** | |||||||
hg19:Y:6144806-G-T hg38:Y:6276765-G-T | IR3_Dst | *** | ||||||
hg38:Y:10790263-C-CT | *** | |||||||
hg38:Y:10790264-CA-C | *** | |||||||
hg19:Y:13254615-C-CTGTGTG hg38:Y:11098939-C-CTGTGTG | *** | |||||||
hg19:Y:22813953-C-A hg38:Y:20652067-C-A | *** | |||||||
hg38:Y:10821877-C-A | *** | |||||||
hg38:Y:10686573-T-C | *** | |||||||
hg38:Y:10686575-C-G | *** | |||||||
hg38:Y:56835143-G-T | *** | |||||||
hg38:Y:10686551-C-T | *** | |||||||
hg19:Y:14926462-CAAAAAA-C hg38:Y:12814527-CAAAAAA-C | 26×A | *** | ||||||
hg19:Y:22023684-GTT-G,GT hg38:Y:19861798-GTT-G,GT | 17×T | *** | ||||||
hg38:Y:10958550-C-G | *** | |||||||
hg19:Y:21961753-C-A hg38:Y:19799867-C-A | *** | |||||||
hg19:Y:9799134-CAAAAAAAA-C hg38:Y:9961525-CAAAAAAAA-C | 24×A | *** | ||||||
hg19:Y:7628568-A-AT hg38:Y:7760527-A-AT | 10×T | *** | ||||||
hg38:Y:10693925-ATTCCATTCAA-A,ATTCCATTCCG | *** | |||||||
hg19:Y:21890771-T-TA hg38:Y:19728885-T-TA | 10×A | *** | ||||||
hg38:Y:10942723-T-A,G | *** | |||||||
hg19:Y:19293770-CAAAAAA-C hg38:Y:17181890-CAAAAAA-C | 29×A | *** | ||||||
hg19:Y:7132062-C-A hg38:Y:7264021-C-A | *** | |||||||
hg19:Y:2909551-AT-A,ATT hg38:Y:3041510-AT-A,ATT | 13×T | *** | ||||||
hg38:Y:10999930-T-G | *** | |||||||
hg19:Y:15904149-C-CAA hg38:Y:13792269-C-CAA | 20×A | *** | ||||||
hg19:Y:13223530-GGAAT-G hg38:Y:11067854-GGAAT-G | *** | |||||||
hg19:Y:13489760-C-T hg38:Y:11334084-C-T | *** | |||||||
hg38:Y:56832534-GTCCAC-G,GTCCAA | *** | |||||||
hg19:Y:14607749-T-C hg38:Y:12495951-T-C | *** | |||||||
hg38:Y:10686537-A-ATTCTT | *** | |||||||
hg19:Y:10034274-C-A hg38:Y:10196665-C-A | *** | |||||||
hg19:Y:13447078-A-T hg38:Y:11291402-A-T | *** | |||||||
hg19:Y:14938582-C-A hg38:Y:12826657-C-A | *** | |||||||
hg19:Y:13489726-C-A hg38:Y:11334050-C-A | *** | |||||||
hg19:Y:2842335-G-T hg38:Y:2974294-G-T | *** | |||||||
hg19:Y:3271644-CTT-C,CT hg38:Y:3403603-CTT-C,CT | 11×T | *** | ||||||
hg19:Y:5170274-G-A hg38:Y:5302233-G-A | *** | |||||||
hg19:Y:5829135-C-G hg38:Y:5961094-C-G | *** | |||||||
hg19:Y:8151329-G-T hg38:Y:8283288-G-T | *** | |||||||
hg38:Y:9124391-C-T | *** | |||||||
hg19:Y:10021950-C-A hg38:Y:10184341-C-A | *** | |||||||
hg38:Y:10657402-T-A | *** | |||||||
hg38:Y:10796661-CCA-AGA,C | *** | |||||||
hg38:Y:10958549-T-C | *** | |||||||
hg19:Y:13453416-T-C hg38:Y:11297740-T-C | *** | |||||||
hg19:Y:14005970-T-C hg38:Y:11885264-T-C | *** | |||||||
hg19:Y:14005986-T-TA hg38:Y:11885280-T-TA | *** | |||||||
hg19:Y:14377238-C-A hg38:Y:12256534-C-A | *** | |||||||
hg19:Y:16278711-A-G hg38:Y:14166831-A-G | *** | |||||||
hg19:Y:16519316-CAAAAAA-C hg38:Y:14407436-CAAAAAA-C | 15×A | *** | ||||||
hg19:Y:17030990-T-C hg38:Y:14919110-T-C | *** | |||||||
hg19:Y:17646907-AAAAT-A hg38:Y:15535027-AAAAT-A | 4×AAAT | *** | ||||||
hg19:Y:18819721-A-G hg38:Y:16707841-A-G | *** | |||||||
hg19:Y:19293961-T-A hg38:Y:17182081-T-A | *** | |||||||
hg19:Y:21529714-C-A hg38:Y:19367828-C-A | *** | |||||||
hg19:Y:22722355-TTTTTTTTG-T,TG hg38:Y:20560469-TTTTTTTTG-T,TG | *** | |||||||
hg19:Y:22997384-C-A hg38:Y:20835498-C-A | *** | |||||||
hg19:Y:23563667-C-A hg38:Y:21401781-C-A | *** | |||||||
hg38:Y:56835101-C-A | *** | |||||||
hg38:Y:56835120-ACTCCACCCCA-A,ACTCCACCCCT | *** | |||||||
hg19:Y:3878644-C-CA,CAAA hg38:Y:4010603-C-CA,CAAA | 15×A | *** | ||||||
hg38:Y:56851274-A-T | *** | |||||||
hg19:Y:6586786-CTTT-C hg38:Y:6718745-CTTT-C | 22×T | *** | ||||||
hg19:Y:5792505-GT-G hg38:Y:5924464-GT-G | 11×T | *** | ||||||
hg19:Y:28385926-T-TACAC hg38:Y:26239779-T-TACAC | P1_gr2 | 20×AC | *** | |||||
hg19:Y:13222434-G-GGT hg38:Y:11066758-G-GGT | *** | |||||||
hg19:Y:13222436-A-AG hg38:Y:11066760-A-AG | *** | |||||||
hg19:Y:5557238-CAA-C,CA hg38:Y:5689197-CAA-C,CA | 23×A | *** | ||||||
hg19:Y:13489615-ACCCACCCCCACCACCACCCA-A,ACCCCGTCCTCACCCTCACCAC hg38:Y:11333939-ACCCACCCCCACCACCACCCA-A,ACCCCGTCCTCACCCTCACCAC | *** | |||||||
hg19:Y:6708940-T-A hg38:Y:6840899-T-A | *** | |||||||
hg19:Y:6806837-T-A hg38:Y:6938796-T-A | *** | |||||||
hg19:Y:15385817-A-G hg38:Y:13273937-A-G | *** | |||||||
hg19:Y:16687686-C-A hg38:Y:14575806-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 732728 | 9597834 | 7858580 | 7758318 |
Kit: 732728 | 14758587 | 9253376 | 8250307 |
Used in age calculations | 14758587 | 9253376 | 8250307 |
Counts of SNPs | 10 | 10 |
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