Murray
BigY3: 644289, BigY2: 644289Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 644289 | BigY2 644289 |
---|---|---|---|---|---|---|---|---|---|
20653936-C-A | 18492050-C-A | P4_Prx | A* | A* | |||||
19720787-C-T | 17608907-C-T | P5_Prx | A* | ||||||
28816764-A-T | 26670617-A-T | A* | A* | ||||||
5400291-G-A | 5532250-G-A | FT120968 | + | ||||||
28664573-G-T | 26518426-G-T | FT122993 | + | ||||||
7792828-G-A | 7924787-G-A | BY67680 | Y | Y | + | + | |||
22178313-A-G | 20016427-A-G | BY138180 | Y | Y | + | + | |||
16258897-G-A | 14147017-G-A | BY106454 | Y | Y | + | + | |||
18017108-GATATATATATATATATATAT-G,GAT | 15905228-GATATATATATATATATATAT-G,GAT | 22×AT | * | ||||||
5937661-C-CCACA | 6069620-C-CCACA | 15×CA | * | ||||||
16296738-AT-A | 14184858-AT-A | 8×T | ** | ||||||
16215293-T-G | 14103413-T-G | ** | |||||||
16319858-G-T | 14207978-G-T | ** | |||||||
16164502-T-G | 14052622-T-G | P8_Dst | ** | ||||||
16104282-A-T | 13992402-A-T | P8_Prx | ** | ||||||
16090453-C-A | 13978573-C-A | ** | |||||||
16044780-C-A | 13932900-C-A | ** | |||||||
16041350-AT-A | 13929470-AT-A | ** | |||||||
16033493-C-A | 13921613-C-A | ** | |||||||
16021233-C-A | 13909353-C-A | ** | |||||||
16017607-A-T | 13905727-A-T | ** | |||||||
15999863-G-T | 13887983-G-T | FT22429 | ** | ||||||
15971412-T-G | 13859532-T-G | ** | |||||||
11022651-A-C | ** | ||||||||
15932019-T-G | 13820139-T-G | ** | |||||||
15081071-A-T | 12969161-A-T | ** | |||||||
14959830-C-A | 12847905-C-A | ** | |||||||
14986311-C-A | 12874379-C-A | ** | |||||||
14989200-C-A | 12877266-C-A | ** | |||||||
14990774-G-T | 12878859-G-T | ** | |||||||
3764665-C-T | 3896624-C-T | ** | |||||||
15081061-A-T | 12969151-A-T | ** | |||||||
15221887-C-A | 13109973-C-A | ** | |||||||
15832166-C-A | 13720286-C-A | ** | |||||||
15268925-C-T | 13157014-C-T | FT180284 | ** | ** | |||||
15332326-C-A | 13220444-C-A | ** | |||||||
15450199-T-A | 13338319-T-A | ** | |||||||
15503348-C-A | 13391468-C-A | ** | |||||||
15728841-A-G | 13616961-A-G | ** | |||||||
15729162-C-A | 13617282-C-A | ** | |||||||
16320394-CAA-C | 14208514-CAA-C | 10×A | ** | ||||||
15791135-C-A | 13679255-C-A | ** | |||||||
16428535-C-A | 14316655-C-A | ** | |||||||
16394461-C-A | 14282581-C-A | ** | |||||||
17993945-C-A | 15882065-C-A | P7_Prx | ** | ||||||
17521767-C-A | 15409887-C-A | ** | |||||||
17535327-C-A | 15423447-C-A | ** | |||||||
17548690-C-A | 15436810-C-A | ** | |||||||
17561760-C-A | 15449880-C-A | ** | |||||||
17779416-C-A | 15667536-C-A | ** | |||||||
17993944-T-A | 15882064-T-A | P7_Prx | ** | ||||||
18155844-T-C | 16043964-T-C | ** | |||||||
17492302-G-T | 15380422-G-T | ** | |||||||
18185339-G-T | 16073459-G-T | ** | |||||||
18185408-G-T | 16073528-G-T | ** | |||||||
18186309-G-T | 16074429-G-T | ** | |||||||
18211626-G-T | 16099746-G-T | ** | |||||||
18329043-C-CTTTT | 16217163-C-CTTTT | P6_Prx | 17×T | ** | |||||
18390100-AAAG-A | 16278220-AAAG-A | P6_Gap | ** | ||||||
18503193-T-TC | 16391313-T-TC | P6_Dst | ** | ||||||
17492322-C-A | 15380442-C-A | ** | |||||||
17492291-A-C | 15380411-A-C | ** | |||||||
16421249-C-A | 14309369-C-A | ** | |||||||
16703634-G-T | 14591754-G-T | ** | |||||||
16616861-C-A | 14504981-C-A | ** | |||||||
16654630-G-T | 14542750-G-T | ** | |||||||
16657914-A-C | 14546034-A-C | ** | |||||||
16662683-T-G | 14550803-T-G | ** | |||||||
16662689-T-A | 14550809-T-A | ** | |||||||
16662705-A-C | 14550825-A-C | ** | |||||||
16724609-G-T | 14612729-G-T | ** | |||||||
17451524-C-A | 15339644-C-A | ** | |||||||
16848351-G-T | 14736471-G-T | ** | |||||||
17071003-C-A | 14959123-C-A | ** | |||||||
17260354-C-A | 15148474-C-A | ** | |||||||
17367726-A-G | 15255846-A-G | ** | |||||||
17372325-C-A | 15260445-C-A | ** | |||||||
17379834-C-A | 15267954-C-A | ** | |||||||
17428365-C-A | 15316485-C-A | ** | |||||||
14764999-C-A | 12653068-C-A | ** | |||||||
14716065-A-C | 12604132-A-C | ** | |||||||
14764974-G-A | 12653043-G-A | ** | |||||||
13509738-G-T | 11354062-G-T | ** | |||||||
13269209-T-G | 11113533-T-G | ** | |||||||
13293965-G-T | 11138289-G-T | ** | |||||||
13306060-C-A | 11150384-C-A | ** | |||||||
13439118-GA-G | 11283442-GA-G | ** | |||||||
13460275-C-A | 11304599-C-A | ** | |||||||
13485691-G-T | 11330015-G-T | ** | |||||||
13540301-A-C | 11384625-A-C | ** | |||||||
13199242-C-A | 11043566-C-A | ** | |||||||
13557763-CATTTACAAAAACTAAACCTAGAT-C | 11402087-CATTTACAAAAACTAAACCTAGAT-C | ** | |||||||
13571859-T-G | 11416183-T-G | ** | |||||||
13586222-C-A | 11430546-C-A | ** | |||||||
13594625-G-T | 11438949-G-T | ** | |||||||
13594720-C-A | 11439044-C-A | ** | |||||||
13601838-C-A | 11446162-C-A | ** | |||||||
13624678-C-A | 11469002-C-A | ** | |||||||
13256285-T-G | 11100609-T-G | ** | |||||||
11033137-GCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTC-G | ** | ||||||||
13697847-C-G | 11542171-C-G | ** | |||||||
10988537-T-C | ** | ||||||||
10969607-G-T | ** | ||||||||
10970747-C-A | ** | ||||||||
10972216-T-A | ** | ||||||||
10977412-T-A | ** | ||||||||
10981253-C-G | ** | ||||||||
10981351-C-A | ** | ||||||||
10988495-C-A | ** | ||||||||
10988546-A-ACTCCG | ** | ||||||||
11026867-C-A | ** | ||||||||
10991974-T-A | ** | ||||||||
10997112-CTCCATTCCATTCCATTCCATTCCATTCCAT-C | ** | ||||||||
11002188-A-G | ** | ||||||||
11004773-GCATTC-G | ** | ||||||||
11007347-C-A | ** | ||||||||
11022628-A-C | ** | ||||||||
4662991-A-T | 4794950-A-T | ** | |||||||
13640516-C-A | 11484840-C-A | ** | |||||||
13697860-T-A | 11542184-T-A | ** | |||||||
14755622-A-G | 12643691-A-G | ** | |||||||
14283781-C-A | 12163075-C-A | ** | |||||||
14123568-G-T | 12002862-G-T | ** | |||||||
14123936-T-G | 12003230-T-G | ** | |||||||
14123977-T-G | 12003271-T-G | FT186332 | ** | ||||||
14196199-A-T | 12075493-A-T | ** | |||||||
14218527-T-A | 12097821-T-A | ** | |||||||
14229877-C-CA | 12109171-C-CA | ** | |||||||
14451808-A-C | 12331081-A-C | ** | |||||||
14050249-C-A | 11929543-C-A | ** | |||||||
14494582-A-T | 12382779-A-T | ** | |||||||
14511954-C-A | 12400159-C-A | ** | |||||||
14527511-A-G | 12415712-A-G | ** | |||||||
14554993-G-T | 12443194-G-T | ** | |||||||
14566514-T-C | 12454714-T-C | ** | |||||||
14715628-T-A | 12603695-T-A | ** | |||||||
18793890-C-A | 16682010-C-A | ** | |||||||
14067128-T-G | 11946422-T-G | ** | |||||||
13995212-G-T | 11874506-G-T | ** | |||||||
13697861-T-A | 11542185-T-A | ** | |||||||
11659128-A-T | ** | ||||||||
13697876-C-A | 11542200-C-A | ** | |||||||
13697886-T-A | 11542210-T-A | ** | |||||||
13697888-G-C | 11542212-G-C | ** | |||||||
13697900-A-C | 11542224-A-C | ** | |||||||
13697954-T-A | 11542278-T-A | ** | |||||||
13710384-A-C | 11554708-A-C | ** | |||||||
13726322-A-T | 11570646-A-T | ** | |||||||
11673211-C-A | ** | ||||||||
13975519-G-T | 11854813-G-T | ** | |||||||
13801146-A-C | 11680440-A-C | ** | |||||||
13854817-G-T | 11734111-G-T | ** | |||||||
13894390-T-G | 11773684-T-G | ** | |||||||
13895921-C-A | 11775215-C-A | ** | |||||||
13908586-C-A | 11787880-C-A | ** | |||||||
13928821-T-G | 11808115-T-G | ** | |||||||
13974920-T-G | 11854214-T-G | ** | |||||||
18710305-A-T | 16598425-A-T | ** | |||||||
18997201-C-A | 16885321-C-A | ** | |||||||
18799647-G-T | 16687767-G-T | ** | |||||||
28491813-C-A | 26345666-C-A | ** | |||||||
26308494-C-A | 24162347-C-A | P1_Y1 | ** | ||||||
27966786-A-T | 25820639-A-T | P1_Y2 | ** | ||||||
28438088-G-T | 26291941-G-T | P1_gr2 | ** | ||||||
28438251-TG-T | 26292104-TG-T | P1_gr2 | ** | ||||||
28438254-G-GT | 26292107-G-GT | P1_gr2 | ** | ||||||
28484441-C-T | 26338294-C-T | ** | |||||||
28529735-G-T | 26383588-G-T | ** | |||||||
26230146-C-A | 24083999-C-A | P1_Y1 | ** | ||||||
28532800-C-A | 26386653-C-A | ** | |||||||
28540550-G-A | 26394403-G-A | ** | |||||||
28545699-A-C | 26399552-A-C | ** | |||||||
28546162-C-A | 26400015-C-A | ** | |||||||
28549431-C-A | 26403284-C-A | ** | |||||||
28585691-C-A | 26439544-C-A | ** | |||||||
28594364-C-A | 26448217-C-A | ** | |||||||
26230149-G-T | 24084002-G-T | P1_Y1 | ** | ||||||
26230143-C-G | 24083996-C-G | P1_Y1 | ** | ||||||
28614811-G-T | 26468664-G-T | ** | |||||||
24408882-G-T | 22262735-G-T | ** | |||||||
23512377-T-A | 21350491-T-A | ** | |||||||
23787022-G-T | 21625136-G-T | ** | |||||||
23802075-T-A | 21640189-T-A | ** | |||||||
23802078-ATCTC-A | 21640192-ATCTC-A | ** | |||||||
23832852-A-T | 21670966-A-T | ** | |||||||
21783747-G-T | ** | ||||||||
24408964-G-T | 22262817-G-T | ** | |||||||
26230132-A-T | 24083985-A-T | P1_Y1 | ** | ||||||
24535355-A-C | 22389208-A-C | P3_t2 | ** | ||||||
24666254-C-A | 22520107-C-A | P3_b2 | ** | ||||||
26062913-A-T | 23916766-A-T | P1_Y1 | ** | ||||||
26062915-A-T | 23916768-A-T | P1_Y1 | ** | ||||||
26230108-A-T | 24083961-A-T | P1_Y1 | ** | ||||||
26230120-G-T | 24083973-G-T | P1_Y1 | ** | ||||||
26230126-A-T | 24083979-A-T | P1_Y1 | ** | ||||||
28612247-T-G | 26466100-T-G | ** | |||||||
28614837-C-T | 26468690-C-T | ** | |||||||
23339676-A-T | 21177790-A-T | ** | |||||||
56846245-A-C | ** | ||||||||
28818970-G-T | 26672823-G-T | ** | |||||||
28818973-G-T | 26672826-G-T | ** | |||||||
28818981-T-C | 26672834-T-C | ** | |||||||
56838179-C-A | ** | ||||||||
56846210-C-G | ** | ||||||||
56846229-C-A | ** | ||||||||
56850828-G-T | ** | ||||||||
28818967-A-C | 26672820-A-C | ** | |||||||
56850851-T-C | ** | ||||||||
56850857-A-G | ** | ||||||||
56850865-C-G | ** | ||||||||
56850870-C-A | ** | ||||||||
56850873-G-A | ** | ||||||||
56857981-A-T | ** | ||||||||
56862543-T-C | ** | ||||||||
28818969-A-C | 26672822-A-C | ** | |||||||
28818962-G-A | 26672815-G-A | ** | |||||||
28614843-TC-T | 26468696-TC-T | ** | |||||||
28642854-AGT-A | 26496707-AGT-A | ** | |||||||
28617684-G-C | 26471537-G-C | ** | |||||||
28621913-G-T | 26475766-G-T | ** | |||||||
28623355-C-A | 26477208-C-A | ** | |||||||
28639835-G-A | 26493688-G-A | ** | |||||||
28641630-T-C | 26495483-T-C | ** | |||||||
6444836-C-CTATA | 6576795-C-CTATA | 12×TA | ** | ||||||
28642853-C-G | 26496706-C-G | ** | |||||||
28700483-C-A | 26554336-C-A | ** | |||||||
28818333-A-T | 26672186-A-T | ** | |||||||
28708462-C-A | 26562315-C-A | ** | |||||||
28723942-G-T | 26577795-G-T | ** | |||||||
28747700-G-T | 26601553-G-T | ** | |||||||
28747822-T-G | 26601675-T-G | ** | |||||||
28763200-C-A | 26617053-C-A | ** | |||||||
28794195-G-C | 26648048-G-C | ** | |||||||
28818323-A-T | 26672176-A-T | ** | |||||||
23441377-C-A | 21279491-C-A | ** | |||||||
23050488-A-T | 20888602-A-T | ** | |||||||
18990419-G-T | 16878539-G-T | ** | |||||||
20045286-G-A | 17933406-G-A | P5_Prx | ** | ||||||
19793377-G-A | 17681497-G-A | P5_Prx | ** | ||||||
19902152-A-T | 17790272-A-T | P5_Prx | ** | ||||||
19902192-A-T | 17790312-A-T | P5_Prx | ** | ||||||
19902203-G-T | 17790323-G-T | P5_Prx | ** | ||||||
19902207-C-A | 17790327-C-A | P5_Prx | ** | ||||||
20025445-CT-C | 17913565-CT-C | P5_Prx | ** | ||||||
20426038-G-T | 18264152-G-T | P5_Dst | ** | ||||||
19739894-G-T | 17628014-G-T | P5_Prx | ** | ||||||
20448648-A-T | 18286762-A-T | P5_Dst | ** | ||||||
20448669-A-T | 18286783-A-T | P5_Dst | ** | ||||||
20448676-A-T | 18286790-A-T | P5_Dst | ** | ||||||
20448683-A-T | 18286797-A-T | P5_Dst | ** | ||||||
20448696-G-T | 18286810-G-T | P5_Dst | ** | ||||||
20448697-A-T | 18286811-A-T | P5_Dst | ** | ||||||
20449471-G-T | 18287585-G-T | P5_Dst | ** | ||||||
19793301-G-C | 17681421-G-C | P5_Prx | ** | ||||||
19718129-G-T | 17606249-G-T | P5_Prx | ** | ||||||
20449518-A-T | 18287632-A-T | P5_Dst | ** | ||||||
19377126-A-C | 17265246-A-C | ** | |||||||
19043664-A-C | 16931784-A-C | ** | |||||||
19088209-T-G | 16976329-T-G | ** | |||||||
19121891-G-T | 17010011-G-T | ** | |||||||
19121920-C-CTTT | 17010040-C-CTTT | 17×T | ** | ||||||
19377093-A-C | 17265213-A-C | ** | |||||||
19377105-A-C | 17265225-A-C | ** | |||||||
19416486-C-A | 17304606-C-A | ** | |||||||
19718110-A-T | 17606230-A-T | P5_Prx | ** | ||||||
19528519-C-A | 17416639-C-A | ** | |||||||
19575789-G-T | 17463909-G-T | P5_Prx | ** | ||||||
19718063-G-T | 17606183-G-T | P5_Prx | ** | ||||||
19718078-A-T | 17606198-A-T | P5_Prx | ** | ||||||
19718096-G-T | 17606216-G-T | P5_Prx | ** | ||||||
19718103-G-T | 17606223-G-T | P5_Prx | ** | ||||||
19718104-A-T | 17606224-A-T | P5_Prx | ** | ||||||
20449480-A-T | 18287594-A-T | P5_Dst | ** | ||||||
20449523-A-T | 18287637-A-T | P5_Dst | ** | ||||||
23038012-C-A | 20876126-C-A | ** | |||||||
22080594-C-A | 19918708-C-A | ** | |||||||
21409459-CCAA-C | 19247573-CCAA-C | ** | |||||||
21500428-T-G | 19338542-T-G | ** | |||||||
21561440-C-A | 19399554-C-A | ** | |||||||
21677422-G-T | 19515536-G-T | ** | |||||||
21993963-A-T | 19832077-A-T | ** | |||||||
22013312-G-T | 19851426-G-T | ** | |||||||
22193197-C-A | 20031311-C-A | ** | |||||||
21353006-C-A | 19191120-C-A | ** | |||||||
22253029-C-T | 20091143-C-T | DYZ19 | ** | ||||||
22263925-C-A | 20102039-C-A | DYZ19 | ** | ||||||
22319810-G-T | 20157924-G-T | DYZ19 | ** | ||||||
22485251-C-A | 20323365-C-A | DYZ19 | ** | ||||||
22782848-C-A | 20620962-C-A | ** | |||||||
22851622-G-T | 20689736-G-T | ** | |||||||
23013864-C-A | 20851978-C-A | ** | |||||||
21371420-C-T | 19209534-C-T | ** | |||||||
21346479-C-A | 19184593-C-A | ** | |||||||
20449524-G-T | 18287638-G-T | P5_Dst | ** | ||||||
20991021-A-T | 18829135-A-T | P4_Dst | ** | ||||||
20449533-A-T | 18287647-A-T | P5_Dst | ** | ||||||
20449545-G-T | 18287659-G-T | P5_Dst | ** | ||||||
20452360-A-T | 18290474-A-T | P5_Dst | ** | ||||||
20452386-C-A | 18290500-C-A | P5_Dst | ** | ||||||
20690154-G-T | 18528268-G-T | P4_Prx | ** | ||||||
20988746-T-TTTCC | 18826860-T-TTTCC | P4_Dst | ** | ||||||
20991019-C-T | 18829133-C-T | P4_Dst | ** | ||||||
20991029-A-T | 18829143-A-T | P4_Dst | ** | ||||||
21320201-C-A | 19158315-C-A | ** | |||||||
20991039-A-T | 18829153-A-T | P4_Dst | ** | ||||||
20991043-A-T | 18829157-A-T | P4_Dst | ** | ||||||
20991058-A-T | 18829172-A-T | P4_Dst | ** | ||||||
21125572-A-C | 18963686-A-C | ** | |||||||
21241772-TCAC-T | 19079886-TCAC-T | ** | |||||||
21247987-A-C | 19086101-A-C | ** | |||||||
21275328-T-A | 19113442-T-A | ** | |||||||
10964044-C-A | ** | ||||||||
13453249-C-A | 11297573-C-A | ** | |||||||
10948721-C-A | ** | ||||||||
20452387-A-T | 18290501-A-T | P5_Dst | ** | ||||||
14157364-A-G | 12036658-A-G | ** | |||||||
3091854-C-A | 3223813-C-A | ** | |||||||
14490797-C-A | 12370066-C-A | ** | |||||||
5172242-C-A | 5304201-C-A | ** | |||||||
5061293-G-T | 5193252-G-T | ** | |||||||
20452381-A-T | 18290495-A-T | P5_Dst | ** | ||||||
9887237-A-G | 10049628-A-G | ** | |||||||
24643330-G-T | 22497183-G-T | P3_t2 | ** | ||||||
20452366-A-T | 18290480-A-T | P5_Dst | ** | ||||||
17993933-G-T | 15882053-G-T | P7_Prx | ** | ||||||
15290206-C-A | 13178305-C-A | Y50486 | ** | ||||||
10808652-A-ATTGTG | ** | ||||||||
22204464-G-T | 20042578-G-T | ** | |||||||
4996291-C-A | 5128250-C-A | ** | |||||||
25931682-T-A | 23785535-T-A | P1_Y1 | ** | ||||||
28818943-C-G | 26672796-C-G | ** | |||||||
22446898-C-A | 20285012-C-A | DYZ19 | ** | ||||||
10693480-G-C | ** | ||||||||
10081966-C-A | 10244357-C-A | ** | |||||||
10081971-G-T | 10244362-G-T | ** | |||||||
15742215-G-T | 13630335-G-T | ** | |||||||
7753108-C-A | 7885067-C-A | ** | |||||||
28818365-T-G | 26672218-T-G | ** | |||||||
23441351-C-A | 21279465-C-A | ** | |||||||
10693484-G-A | ** | ||||||||
10785258-C-T | ** | ||||||||
10693485-G-A | ** | ||||||||
14163729-C-A | 12043023-C-A | ** | |||||||
14420354-C-A | 12299629-C-A | ** | |||||||
21009173-T-TAAG | 18847287-T-TAAG | P4_Dst | ** | ||||||
6303548-A-C | 6435507-A-C | IR3_Dst | ** | ||||||
10965014-T-G | ** | ||||||||
2979037-C-A | 3110996-C-A | ** | |||||||
10761204-C-A | ** | ||||||||
10999966-C-T | ** | ||||||||
10081949-G-T | 10244340-G-T | ** | |||||||
3491660-C-A | 3623619-C-A | ** | |||||||
3345570-C-A | 3477529-C-A | ** | |||||||
3347603-T-G | 3479562-T-G | ** | |||||||
3389875-G-T | 3521834-G-T | ** | |||||||
3392321-G-T | 3524280-G-T | ** | |||||||
3438116-G-T | 3570075-G-T | ** | |||||||
3469863-T-A | 3601822-T-A | ** | |||||||
3576519-G-T | 3708478-G-T | ** | |||||||
3303577-C-A | 3435536-C-A | ** | |||||||
3586834-T-C | 3718793-T-C | ** | |||||||
3649287-A-T | 3781246-A-T | ** | |||||||
3654829-G-T | 3786788-G-T | ** | |||||||
10937896-G-T | ** | ||||||||
3677958-C-A | 3809917-C-A | ** | |||||||
3784854-A-G | 3916813-A-G | ** | |||||||
3934830-C-G | 4066789-C-G | ** | |||||||
3326519-C-A | 3458478-C-A | ** | |||||||
3303468-A-AT | 3435427-A-AT | 10×T | ** | ||||||
18970320-CAAA-C | 16858440-CAAA-C | 28×A | ** | ||||||
2925505-C-A | 3057464-C-A | ** | |||||||
3410322-C-A | 3542281-C-A | ** | |||||||
13217171-C-A | 11061495-C-A | ** | |||||||
13445395-C-A | 11289719-C-A | ** | |||||||
13253678-C-A | 11098002-C-A | ** | |||||||
28510367-C-A | 26364220-C-A | ** | |||||||
2688733-C-A | 2820692-C-A | ** | |||||||
2979020-C-A | 3110979-C-A | ** | |||||||
3250576-T-A | 3382535-T-A | ** | |||||||
3005662-G-T | 3137621-G-T | ** | |||||||
3061316-C-A | 3193275-C-A | ** | |||||||
3129122-A-T | 3261081-A-T | ** | |||||||
3141169-C-A | 3273128-C-A | ** | |||||||
3149810-C-A | 3281769-C-A | ** | |||||||
3172071-A-T | 3304030-A-T | ** | |||||||
3208967-C-A | 3340926-C-A | ** | |||||||
10081956-C-A | 10244347-C-A | ** | |||||||
10081937-T-C | 10244328-T-C | ** | |||||||
3988007-C-A | 4119966-C-A | ** | |||||||
28794210-G-C | 26648063-G-C | ** | |||||||
56750002-A-T | ** | ||||||||
10804735-C-A | ** | ||||||||
4957893-G-T | 5089852-G-T | ** | |||||||
8976867-A-T | 9139258-A-T | ** | |||||||
13596989-C-A | 11441313-C-A | ** | |||||||
10804747-T-C | ** | ||||||||
10673357-A-T | ** | ||||||||
15741552-T-C | 13629672-T-C | ** | |||||||
10673403-A-G | ** | ||||||||
5199635-C-A | 5331594-C-A | ** | |||||||
10795024-C-A | ** | ||||||||
3599657-C-A | 3731616-C-A | ** | |||||||
10753969-C-G | ** | ||||||||
10753971-T-A | ** | ||||||||
10754000-T-C | ** | ||||||||
28556377-A-T | 26410230-A-T | ** | |||||||
13859429-G-A | 11738723-G-A | ** | |||||||
10869971-C-CTACAA | ** | ||||||||
28818497-G-T | 26672350-G-T | ** | |||||||
5540254-CGT-C | 5672213-CGT-C | 10×GT | ** | ||||||
13616425-AGT-A | 11460749-AGT-A | ** | |||||||
17926575-C-A | 15814695-C-A | ** | |||||||
24388535-CTA-C | 22242388-CTA-C | ** | |||||||
14355254-C-A | 12234549-C-A | ** | |||||||
5686218-G-C | 5818177-G-C | Z2693 | ** | ||||||
13801204-G-T | 11680498-G-T | ** | |||||||
21788347-A-G | 19626461-A-G | ** | |||||||
10081982-C-T | 10244373-C-T | ** | |||||||
10082040-A-C | 10244431-A-C | ** | |||||||
22263743-G-T | 20101857-G-T | DYZ19 | ** | ||||||
19809861-GT-G | 17697981-GT-G | P5_Prx | 9×T | ** | |||||
3086273-C-A | 3218232-C-A | ** | |||||||
10081963-C-T | 10244354-C-T | ** | |||||||
10081968-C-T | 10244359-C-T | ** | |||||||
11001561-C-G | ** | ||||||||
14025608-AAG-A | 11904902-AAG-A | ** | |||||||
11645102-G-T | ** | ||||||||
13588346-C-A | 11432670-C-A | ** | |||||||
10860011-A-T | ** | ||||||||
28610439-G-T | 26464292-G-T | ** | |||||||
10744654-C-A | ** | ||||||||
10844199-A-G | ** | ||||||||
13461082-AG-A | 11305406-AG-A | ** | |||||||
12675898-AT-A | 27×T | ** | |||||||
10790368-C-A | ** | ||||||||
10927860-A-T | ** | ||||||||
18890964-T-G | 16779084-T-G | ** | |||||||
10982787-G-T | ** | ||||||||
56850856-C-A | ** | ||||||||
10844180-C-T | ** | ||||||||
6926306-C-A | 7058265-C-A | ** | |||||||
4240342-C-A | 4372301-C-A | ** | |||||||
10769667-C-A | ** | ||||||||
11001546-T-C | ** | ||||||||
21556945-C-G | 19395059-C-G | ** | |||||||
28818351-C-G | 26672204-C-G | ** | |||||||
20579347-C-A | 18417461-C-A | P5_Dst | ** | ||||||
15631705-T-G | 13519825-T-G | ** | |||||||
15518692-T-C | 13406812-T-C | ** | |||||||
28376023-C-A | 26229876-C-A | P1_gr2 | ** | ||||||
13485667-C-A | 11329991-C-A | ** | |||||||
10927825-T-A | ** | ||||||||
22881304-T-G | 20719418-T-G | ** | |||||||
28818179-G-C | 26672032-G-C | ** | |||||||
9991173-C-A | 10153564-C-A | ** | |||||||
7308286-C-A | 7440245-C-A | ** | |||||||
6326215-CA-C | 6458174-CA-C | IR3_Dst | ** | ||||||
10791199-C-A | ** | ||||||||
10804752-C-A | ** | ||||||||
11014530-T-A | ** | ||||||||
10804743-C-A | ** | ||||||||
28818348-A-T | 26672201-A-T | ** | |||||||
3985991-C-A | 4117950-C-A | ** | |||||||
3677927-C-A | 3809886-C-A | ** | |||||||
4087418-A-T | 4219377-A-T | ** | |||||||
9997987-C-A | 10160378-C-A | ** | |||||||
9700900-A-T | 9863291-A-T | IR3_Prx | ** | ||||||
9700912-G-T | 9863303-G-T | IR3_Prx | ** | ||||||
9717064-C-A | 9879455-C-A | IR3_Prx | ** | ||||||
9717072-C-A | 9879463-C-A | IR3_Prx | ** | ||||||
9967088-C-A | 10129479-C-A | ** | |||||||
9996357-C-A | 10158748-C-A | ** | |||||||
10024362-T-G | 10186753-T-G | ** | |||||||
9482320-A-C | 9644711-A-C | ** | |||||||
10658937-T-G | ** | ||||||||
10663261-T-A | ** | ||||||||
10663263-G-T | ** | ||||||||
10673354-C-A | ** | ||||||||
10674052-G-T | ** | ||||||||
10685849-C-A | ** | ||||||||
9625870-TG-T | 9788261-TG-T | IR3_Prx | ** | ||||||
9240796-C-A | 9403187-C-A | ** | |||||||
10744781-A-T | ** | ||||||||
8669749-C-A | 8801708-C-A | ** | |||||||
7590578-G-T | 7722537-G-T | ** | |||||||
8008081-C-A | 8140040-C-A | ** | |||||||
4132626-G-T | 4264585-G-T | ** | |||||||
8061816-G-T | 8193775-G-T | ** | |||||||
8085459-A-T | 8217418-A-T | ** | |||||||
8091035-T-G | 8222994-T-G | ** | |||||||
8678285-C-A | 8810244-C-A | ** | |||||||
9171218-T-C | 9333609-T-C | ** | |||||||
8725127-T-G | 8857086-T-G | ** | |||||||
8734210-A-T | 8866169-A-T | ** | |||||||
8736773-C-A | 8868732-C-A | ** | |||||||
9117171-C-A | ** | ||||||||
8978126-T-A | 9140517-T-A | ** | |||||||
8988565-A-T | 9150956-A-T | ** | |||||||
9015755-C-A | 9178146-C-A | ** | |||||||
10691126-TC-T | ** | ||||||||
10759859-C-A | ** | ||||||||
7377593-A-T | 7509552-A-T | ** | |||||||
10887213-C-T | ** | ||||||||
10842138-C-A | ** | ||||||||
10860042-A-C | ** | ||||||||
10860043-C-T | ** | ||||||||
10860390-C-A | ** | ||||||||
10869016-T-C | ** | ||||||||
10882833-C-A | ** | ||||||||
10889383-C-A | ** | ||||||||
10838750-T-A | ** | ||||||||
10893095-C-A | ** | ||||||||
10894288-T-G | ** | ||||||||
10896091-C-A | FT165010 | ** | |||||||
10908113-C-A | ** | ||||||||
10918752-A-C | ** | ||||||||
10936714-T-G | ** | ||||||||
10936724-T-G | ** | ||||||||
10840152-C-A | ** | ||||||||
10837075-C-A | ** | ||||||||
10772110-T-A | ** | ||||||||
10780613-A-T | ** | ||||||||
10772909-G-T | ** | ||||||||
10772910-A-T | ** | ||||||||
10772933-C-A | ** | ||||||||
10775141-C-A | ** | ||||||||
10777816-C-A | ** | ||||||||
10780591-G-A | ** | ||||||||
10784501-C-A | ** | ||||||||
10835391-C-A | ** | ||||||||
10801619-C-A | ** | ||||||||
10804758-A-T | ** | ||||||||
10804765-C-T | ** | ||||||||
10814929-C-A | ** | ||||||||
10815649-T-A | ** | ||||||||
10823440-A-T | ** | ||||||||
10826327-C-A | ** | ||||||||
7384697-C-T | 7516656-C-T | FT167370 | ** | ||||||
8058466-T-G | 8190425-T-G | ** | |||||||
7347593-C-G | 7479552-C-G | ** | |||||||
5358980-G-T | 5490939-G-T | ** | |||||||
5017335-GCAATGATTTCAGGCAGCA-G | 5149294-GCAATGATTTCAGGCAGCA-G | ** | |||||||
5176718-C-A | 5308677-C-A | ** | |||||||
5190698-C-A | 5322657-C-A | ** | |||||||
5220300-C-A | 5352259-C-A | ** | |||||||
5257693-C-A | 5389652-C-A | ** | |||||||
5270295-C-A | 5402254-C-A | ** | |||||||
5444172-C-A | 5576131-C-A | ** | |||||||
4958541-T-A | 5090500-T-A | ** | |||||||
5454736-T-A | 5586695-T-A | ** | |||||||
5524055-C-A | 5656014-C-A | ** | |||||||
5547277-T-G | 5679236-T-G | ** | |||||||
5547285-T-A | 5679244-T-A | ** | |||||||
7306407-A-C | 7438366-A-C | ** | |||||||
5609605-A-T | 5741564-A-T | ** | |||||||
5650587-C-A | 5782546-C-A | ** | |||||||
5017299-C-A | 5149258-C-A | ** | |||||||
4937344-G-T | 5069303-G-T | ** | |||||||
5770226-G-T | 5902185-G-T | ** | |||||||
4522298-C-A | 4654257-C-A | ** | |||||||
4180924-G-T | 4312883-G-T | ** | |||||||
4201617-C-A | 4333576-C-A | ** | |||||||
4229410-G-T | 4361369-G-T | ** | |||||||
4229434-G-T | 4361393-G-T | ** | |||||||
4296084-C-A | 4428043-C-A | ** | |||||||
4316076-G-T | 4448035-G-T | ** | |||||||
4499867-C-A | 4631826-C-A | ** | |||||||
4586107-C-A | 4718066-C-A | ** | |||||||
4937339-C-A | 5069298-C-A | ** | |||||||
4604383-T-C | 4736342-T-C | ** | |||||||
4651487-C-A | 4783446-C-A | ** | |||||||
4839368-G-T | 4971327-G-T | ** | |||||||
4839771-G-T | 4971730-G-T | ** | |||||||
4863602-C-A | 4995561-C-A | ** | |||||||
4898838-C-A | 5030797-C-A | ** | |||||||
4928899-TA-T | 5060858-TA-T | ** | |||||||
5714803-T-C | 5846762-T-C | ** | |||||||
5609599-A-T | 5741558-A-T | ** | |||||||
5869430-C-A | 6001389-C-A | ** | |||||||
7156651-C-A | 7288610-C-A | ** | |||||||
7127679-C-A | 7259638-C-A | ** | |||||||
7123468-C-A | 7255427-C-A | ** | |||||||
7164417-A-G | 7296376-A-G | ** | |||||||
7185312-C-A | 7317271-C-A | ** | |||||||
7186580-A-C | 7318539-A-C | ** | |||||||
7115592-C-A | 7247551-C-A | ** | |||||||
7058621-T-G | 7190580-T-G | ** | |||||||
7235317-G-T | 7367276-G-T | ** | |||||||
7058561-T-G | 7190520-T-G | ** | |||||||
5895175-A-G | 6027134-A-G | ** | |||||||
7015324-C-A | 7147283-C-A | FT211884 | 23×T | ** | |||||
6977227-T-A | 7109186-T-A | ** | |||||||
6816654-T-G | 6948613-T-G | ** | |||||||
7062325-A-G | 7194284-A-G | ** | |||||||
6682352-A-C | 6814311-A-C | ** | |||||||
6665246-G-T | 6797205-G-T | ** | |||||||
6354442-C-A | 6486401-C-A | ** | |||||||
5937240-CTCTATATA-C | 6069199-CTCTATATA-C | ** | |||||||
5999417-C-A | 6131376-C-A | ** | |||||||
6085147-C-A | 6217106-C-A | ** | |||||||
6259389-C-A | 6391348-C-A | IR3_Dst | ** | ||||||
6303546-G-T | 6435505-G-T | IR3_Dst | ** | ||||||
6321387-C-CAA | 6453346-C-CAA | IR3_Dst | ** | ||||||
6022259-C-T | 6154218-C-T | ** | |||||||
6490414-T-G | 6622373-T-G | ** | |||||||
6540891-C-A | 6672850-C-A | ** | |||||||
7243373-C-A | 7375332-C-A | ** | |||||||
6582486-C-A | 6714445-C-A | ** | |||||||
7369954-A-G | 7501913-A-G | *** | |||||||
5956237-G-A | 6088196-G-A | 8×T | *** | ||||||
4663001-A-ATT | 4794960-A-ATT | *** | |||||||
4654838-A-G | 4786797-A-G | *** | |||||||
24659488-T-C | 22513341-T-C | P3_b2 | *** | ||||||
21502782-CTTT-C | 19340896-CTTT-C | 16×T | *** | ||||||
56828725-A-G | *** | ||||||||
14449822-C-T | 12329095-C-T | *** | |||||||
23440228-T-A | 21278342-T-A | *** | |||||||
14449831-A-T | 12329104-A-T | *** | |||||||
19802671-T-C | 17690791-T-C | P5_Prx | *** | ||||||
19138057-A-G | 17026177-A-G | *** | |||||||
5073305-C-T | 5205264-C-T | *** | |||||||
4764783-A-T | 4896742-A-T | *** | |||||||
15980721-TAA-T,TA | 13868841-TAA-T,TA | 17×A | *** | ||||||
16818702-G-A | 14706822-G-A | *** | |||||||
9771940-CTT-C,CTTTT | 9934331-CTT-C,CTTTT | 18×T | *** | ||||||
4663000-T-A | 4794959-T-A | *** | |||||||
13457683-T-A | 11302007-T-A | *** | |||||||
21620538-TATACTATACT-T,TATACTATACC | 19458652-TATACTATACT-T,TATACTATACC | *** | |||||||
4222670-C-A | 4354629-C-A | *** | |||||||
13808739-G-A | 11688033-G-A | *** | |||||||
8481498-T-A | 8613457-T-A | *** | |||||||
13485438-A-T | 11329762-A-T | *** | |||||||
21852574-C-A | 19690688-C-A | *** | |||||||
14294262-C-A | 12173556-C-A | *** | |||||||
9321871-C-A | 9484262-C-A | *** | |||||||
11655424-A-C | *** | ||||||||
2738754-C-A | 2870713-C-A | 8×T | *** | ||||||
11006872-A-C | *** | ||||||||
10926702-C-G | *** | ||||||||
17718412-GTTTTT-G | 15606532-GTTTTT-G | 20×T | *** | ||||||
13485405-G-A | 11329729-G-A | *** | |||||||
13504981-G-T | 11349305-G-T | *** | |||||||
15324343-TTG-T | 13212461-TTG-T | *** | |||||||
6756933-AAG-A | 6888892-AAG-A | *** | |||||||
21755795-C-CTT | *** | ||||||||
14567718-T-C | 12455918-T-C | *** | |||||||
28642788-CCTCT-C,CCT | 26496641-CCTCT-C,CCT | 8×CT | *** | ||||||
28632239-C-A | 26486092-C-A | *** | |||||||
24604578-G-T | 22458431-G-T | P3_t2 | *** | ||||||
21582366-G-T | 19420480-G-T | *** | |||||||
21182397-CTTTTT-C,CTT | 19020511-CTTTTT-C,CTT | 20×T | *** | ||||||
14992527-C-A | 12880612-C-A | *** | |||||||
20824599-CTA-C | 18662713-CTA-C | P4_Gap | *** | ||||||
7142536-G-A | 7274495-G-A | *** | |||||||
10954970-C-A | *** | ||||||||
10896284-CT-C | *** | ||||||||
10796681-C-A | *** | ||||||||
10770634-T-A,C | *** | ||||||||
7338629-C-A | 7470588-C-A | *** | |||||||
7241834-A-G | 7373793-A-G | *** | |||||||
28522376-CTTTTTTT-C,CTTTTTT | 26376229-CTTTTTTT-C,CTTTTTT | 18×T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 644289 | 10138116 | 8228197 | 8084451 |
Kit: 644289 | 14728648 | 9247958 | 8245712 |
Used in age calculations | 14728648 | 9247958 | 8245712 |
Counts of SNPs | 3 | 3 |
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