McQueen
BigY3: 669937, BigY2: 669937MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 669937 | BigY2 669937 |
---|---|---|---|---|---|---|---|---|---|
15261133-A-T | 13149217-A-T | Y | Y | A* | |||||
25611910-C-T | 23465763-C-T | P1_gr1 | A* | ||||||
18531567-T-C | 16419687-T-C | P6_Dst | A* | ||||||
19308071-G-T | 17196191-G-T | BY128112 | Y | Y | + | + | |||
10048239-G-A | 10210630-G-A | + | |||||||
9761543-G-A | 9923934-G-A | BY80852 | Y | + | + | ||||
4043881-T-C | 4175840-T-C | FT125710 | + | ||||||
7417823-G-T | 7549782-G-T | BY65110 | Y | Y | + | + | |||
4734555-C-T | 4866514-C-T | FT125869 | + | ||||||
5621899-C-T | 5753858-C-T | FT126102 | + | ||||||
7914070-G-A | 8046029-G-A | BY68722 | Y | Y | + | + | |||
2888598-C-T | 3020557-C-T | L1251 | Y | Y | + | + | |||
13690473-C-T | 11534797-C-T | BY3290 | BY31395 | ** | + | ||||
23612480-C-A | 21450594-C-A | ** | |||||||
15572384-C-A | 13460504-C-A | ** | |||||||
15966669-C-A | 13854789-C-A | ** | |||||||
15499437-C-A | 13387557-C-A | ** | |||||||
15964627-A-T | 13852747-A-T | ** | |||||||
15504216-C-A | 13392336-C-A | ** | |||||||
15898257-C-A | 13786377-C-A | ** | |||||||
15509575-C-A | 13397695-C-A | ** | |||||||
15859340-C-A | 13747460-C-A | ** | |||||||
15801705-A-T | 13689825-A-T | ** | |||||||
15798364-C-A | 13686484-C-A | ** | |||||||
15700537-C-A | 13588657-C-A | ** | |||||||
17919855-GAA-G | 15807975-GAA-G | 25×A | ** | ||||||
15739376-C-A | 13627496-C-A | ** | |||||||
15585130-GCCAA-G | 13473250-GCCAA-G | ** | |||||||
15615853-A-G | 13503973-A-G | ** | |||||||
15718392-T-A | 13606512-T-A | ** | |||||||
15619640-A-G | 13507760-A-G | ** | |||||||
15717125-C-A | 13605245-C-A | ** | |||||||
15711988-G-A | 13600108-G-A | ** | |||||||
15580390-C-A | 13468510-C-A | ** | |||||||
16051678-C-A | 13939798-C-A | ** | |||||||
15967643-C-A | 13855763-C-A | ** | |||||||
16514538-C-G | 14402658-C-G | ** | |||||||
23367249-A-C | 21205363-A-C | ** | |||||||
17215768-C-A | 15103888-C-A | ** | |||||||
23427066-G-A | 21265180-G-A | F26055 | ** | ||||||
17080627-C-A | 14968747-C-A | ** | |||||||
16989153-C-A | 14877273-C-A | ** | |||||||
16970315-C-A | 14858435-C-A | ** | |||||||
16834213-C-A | 14722333-C-A | ** | |||||||
23501876-T-C | 21339990-T-C | ** | |||||||
16761237-C-A | 14649357-C-A | ** | |||||||
16733688-C-A | 14621808-C-A | ** | |||||||
16535960-C-A | 14424080-C-A | ** | |||||||
16514515-C-A | 14402635-C-A | ** | |||||||
16007975-G-T | 13896095-G-T | ** | |||||||
16507156-C-A | 14395276-C-A | ** | |||||||
16462571-G-T | 14350691-G-T | ** | |||||||
16459515-TAGTTATTATTATTAAGAC-T | 14347635-TAGTTATTATTATTAAGAC-T | ** | |||||||
16458167-C-A | 14346287-C-A | ** | |||||||
16436003-C-A | 14324123-C-A | ** | |||||||
16430934-T-C | 14319054-T-C | ** | |||||||
16375942-C-A | 14264062-C-A | ** | |||||||
23550145-C-A | 21388259-C-A | ** | |||||||
16275945-G-T | 14164065-G-T | ** | |||||||
23579373-C-A | 21417487-C-A | ** | |||||||
16041256-C-A | 13929376-C-A | ** | |||||||
15426258-C-A | 13314378-C-A | ** | |||||||
15662168-C-A | 13550288-C-A | ** | |||||||
15379396-C-A | 13267516-C-A | ** | |||||||
11646343-G-T | ** | ||||||||
14358541-C-G | 12237836-C-G | ** | |||||||
14313541-G-A | 12192835-G-A | ** | |||||||
14294822-C-A | 12174116-C-A | ** | |||||||
14213902-T-A | 12093196-T-A | ** | |||||||
14187901-A-G | 12067195-A-G | ** | |||||||
14149487-A-T | 12028781-A-T | ** | |||||||
14142969-C-A | 12022263-C-A | ** | |||||||
14080473-C-A | 11959767-C-A | ** | |||||||
14054867-C-A | 11934161-C-A | ** | |||||||
14050720-C-A | 11930014-C-A | ** | |||||||
11656228-C-T | FT200073 | ** | |||||||
11642921-C-A | ** | ||||||||
14440180-A-C | 12319453-A-C | ** | |||||||
13596386-G-T | 11440710-G-T | ** | |||||||
24384017-C-A | 22237870-C-A | ** | |||||||
13527369-C-A | 11371693-C-A | ** | |||||||
13497948-A-T | 11342272-A-T | ** | |||||||
13486650-G-A | 11330974-G-A | ** | |||||||
13486641-G-T | 11330965-G-T | ** | |||||||
24417022-GAA-G | 22270875-GAA-G | ** | |||||||
24447306-G-T | 22301159-G-T | ** | |||||||
13433474-C-A | 11277798-C-A | ** | |||||||
13327174-C-A | 11171498-C-A | ** | |||||||
22032674-C-A | 19870788-C-A | ** | |||||||
24494218-G-T | 22348071-G-T | ** | |||||||
14427726-C-A | 12307001-C-A | ** | |||||||
14501119-C-A | 12389324-C-A | ** | |||||||
17363326-C-A | 15251446-C-A | ** | |||||||
14788966-C-A | 12677037-C-A | ** | |||||||
23633372-TTTTTTTTTTTTTTTTTTTTTGAGATGGAG-T | 21471486-TTTTTTTTTTTTTTTTTTTTTGAGATGGAG-T | ** | |||||||
23742281-C-A | 21580395-C-A | ** | |||||||
15134481-C-A | 13022568-C-A | ** | |||||||
15129289-C-A | 13017376-C-A | ** | |||||||
15056902-G-T | 12944994-G-T | ** | |||||||
14984200-C-A | 12872268-C-A | ** | |||||||
23818128-C-A | 21656242-C-A | ** | |||||||
23869966-G-T | 21708080-G-T | ** | |||||||
23954282-C-A | 21808135-C-A | ** | |||||||
23955006-G-T | 21808859-G-T | ** | |||||||
14807476-C-CA | 12695547-C-CA | 9×A | ** | ||||||
14788905-A-C | 12676976-A-C | ** | |||||||
23958425-G-T | 21812278-G-T | ** | |||||||
14776912-T-G | 12664981-T-G | ** | |||||||
14776877-A-C | 12664946-A-C | ** | |||||||
14757512-T-A | 12645581-T-A | ** | |||||||
14701544-T-A | 12589610-T-A | ** | |||||||
14701538-C-A | 12589604-C-A | ** | |||||||
14671853-G-T | 12559919-G-T | ** | |||||||
14627902-G-C | 12515970-G-C | ** | |||||||
14593861-C-A | 12482061-C-A | ** | |||||||
14558194-G-T | 12446395-G-T | ** | |||||||
14519455-C-A | 12407656-C-A | ** | |||||||
14506725-A-C | 12394930-A-C | ** | |||||||
14506093-C-A | 12394298-C-A | ** | |||||||
17285163-T-G | 15173283-T-G | ** | |||||||
17483811-C-A | 15371931-C-A | ** | |||||||
17375593-C-A | 15263713-C-A | ** | |||||||
20473453-A-T | 18311567-A-T | P5_Dst | ** | ||||||
21138551-T-G | 18976665-T-G | ** | |||||||
22561794-C-A | 20399908-C-A | ** | |||||||
22598159-T-G | 20436273-T-G | ** | |||||||
21087349-C-A | 18925463-C-A | ** | |||||||
20932595-A-C | 18770709-A-C | P4_Dst | ** | ||||||
22722414-C-A | 20560528-C-A | ** | |||||||
20685924-C-A | 18524038-C-A | P4_Prx | ** | ||||||
20679997-C-A | 18518111-C-A | P4_Prx | ** | ||||||
20679958-T-A | 18518072-T-A | P4_Prx | ** | ||||||
20679942-C-A | 18518056-C-A | P4_Prx | ** | ||||||
20473447-A-T | 18311561-A-T | P5_Dst | ** | ||||||
21155150-A-C | 18993264-A-C | ** | |||||||
20473446-A-T | 18311560-A-T | P5_Dst | ** | ||||||
20473443-A-T | 18311557-A-T | P5_Dst | ** | ||||||
20473424-A-T | 18311538-A-T | P5_Dst | ** | ||||||
20473418-A-T | 18311532-A-T | P5_Dst | ** | ||||||
22775994-C-A | 20614108-C-A | ** | |||||||
19668831-G-T | 17556951-G-T | P5_Prx | ** | ||||||
19649431-C-A | 17537551-C-A | P5_Prx | ** | ||||||
22816351-A-T | 20654465-A-T | ** | |||||||
19509218-C-A | 17397338-C-A | ** | |||||||
19479176-A-C | 17367296-A-C | ** | |||||||
19444857-C-A | 17332977-C-A | ** | |||||||
21149687-C-A | 18987801-C-A | ** | |||||||
22529528-C-A | 20367642-C-A | FT194247 | ** | ||||||
19344561-C-A | 17232681-C-A | ** | |||||||
21596541-C-T | 19434655-C-T | ** | |||||||
21959799-C-A | 19797913-C-A | ** | |||||||
21928743-C-A | 19766857-C-A | ** | |||||||
21885766-A-C | 19723880-A-C | ** | |||||||
21818918-T-A | 19657032-T-A | ** | |||||||
21731539-C-A | 19569653-C-A | ** | |||||||
22202048-C-A | 20040162-C-A | ** | |||||||
21700709-G-A | 19538823-G-A | ** | |||||||
21653825-A-C | 19491939-A-C | ** | |||||||
22202577-A-C | 20040691-A-C | ** | |||||||
21603939-A-C | 19442053-A-C | ** | |||||||
21603919-C-A | 19442033-C-A | ** | |||||||
21589656-C-A | 19427770-C-A | ** | |||||||
22297897-T-A | 20136011-T-A | DYZ19 | ** | ||||||
22203364-C-A | 20041478-C-A | ** | |||||||
21554930-C-A | 19393044-C-A | ** | |||||||
21500272-C-A | 19338386-C-A | ** | |||||||
21472337-C-A | 19310451-C-A | ** | |||||||
22229621-G-A | 20067735-G-A | BY29949 | DYZ19 | ** | |||||
21464256-T-G | 19302370-T-G | ** | |||||||
21464248-A-C | 19302362-A-C | ** | |||||||
21435353-ATT-A | 19273467-ATT-A | ** | |||||||
21394859-T-G | 19232973-T-G | ** | |||||||
21306179-C-A | 19144293-C-A | ** | |||||||
22229662-A-T | 20067776-A-T | DYZ19 | ** | ||||||
19391169-C-A | 17279289-C-A | ** | |||||||
19321325-C-A | 17209445-C-A | ** | |||||||
17375727-G-T | 15263847-G-T | ** | |||||||
17808127-A-C | 15696247-A-C | ** | |||||||
18421526-C-A | 16309646-C-A | P6_Gap | ** | ||||||
18382913-C-A | 16271033-C-A | P6_Gap | ** | ||||||
18266891-C-A | 16155011-C-A | ** | |||||||
23194817-CTTTT-C | 21032931-CTTTT-C | 24×T | ** | ||||||
18137393-C-A | 16025513-C-A | ** | |||||||
18119476-C-A | 16007596-C-A | ** | |||||||
17983502-C-A | 15871622-C-A | ** | |||||||
17962807-C-A | 15850927-C-A | ** | |||||||
17912614-T-C | 15800734-T-C | ** | |||||||
23256481-C-A | 21094595-C-A | ** | |||||||
17808120-A-C | 15696240-A-C | ** | |||||||
18630129-C-A | 16518249-C-A | ** | |||||||
17763785-C-A | 15651905-C-A | ** | |||||||
23298688-T-A | 21136802-T-A | ** | |||||||
17675410-C-A | 15563530-C-A | ** | |||||||
23309454-T-A | 21147568-T-A | ** | |||||||
17654988-C-A | 15543108-C-A | ** | |||||||
17505761-C-A | 15393881-C-A | ** | |||||||
25145145-C-A | 22998998-C-A | g1 | ** | ||||||
17483790-T-A | 15371910-T-A | ** | |||||||
23341186-G-T | 21179300-G-T | ** | |||||||
17420906-G-A | 15309026-G-A | ** | |||||||
17402263-T-G | 15290383-T-G | ** | |||||||
18556098-T-C | 16444218-T-C | ** | |||||||
18635414-C-T | 16523534-C-T | ** | |||||||
22948262-C-A | 20786376-C-A | ** | |||||||
23058669-C-A | 20896783-C-A | ** | |||||||
19133272-A-C | 17021392-A-C | ** | |||||||
19131514-T-G | 17019634-T-G | ** | |||||||
19127845-C-A | 17015965-C-A | ** | |||||||
22962186-C-A | 20800300-C-A | ** | |||||||
19041232-C-A | 16929352-C-A | ** | |||||||
22963284-C-A | 20801398-C-A | ** | |||||||
18966043-C-A | 16854163-C-A | ** | |||||||
18966042-T-A | 16854162-T-A | ** | |||||||
18856432-C-A | 16744552-C-A | ** | |||||||
18844194-G-T | 16732314-G-T | ** | |||||||
23029708-C-A | 20867822-C-A | ** | |||||||
18826755-G-A | 16714875-G-A | ** | |||||||
23185078-C-T | 21023192-C-T | ** | |||||||
18804054-G-A | 16692174-G-A | ** | |||||||
18780115-C-A | 16668235-C-A | ** | |||||||
18769527-C-A | 16657647-C-A | ** | |||||||
18753418-G-T | 16641538-G-T | ** | |||||||
18753214-G-T | 16641334-G-T | ** | |||||||
18746957-C-A | 16635077-C-A | ** | |||||||
18717808-G-T | 16605928-G-T | ** | |||||||
18710659-C-A | 16598779-C-A | ** | |||||||
23137353-G-T | 20975467-G-T | ** | |||||||
23157363-C-A | 20995477-C-A | ** | |||||||
18692526-C-A | 16580646-C-A | ** | |||||||
24523945-G-T | 22377798-G-T | ** | |||||||
13296294-C-A | 11140618-C-A | ** | |||||||
13229510-C-A | 11073834-C-A | ** | |||||||
7086955-T-G | 7218914-T-G | ** | |||||||
7352170-G-T | 7484129-G-T | ** | |||||||
7336356-T-A | 7468315-T-A | ** | |||||||
7321459-C-A | 7453418-C-A | ** | |||||||
7311339-C-A | 7443298-C-A | ** | |||||||
7217758-G-T | 7349717-G-T | ** | |||||||
7187825-C-A | 7319784-C-A | ** | |||||||
4226643-A-T | 4358602-A-T | ** | |||||||
4421855-T-C | 4553814-T-C | ** | |||||||
7138068-C-A | 7270027-C-A | ** | |||||||
7090540-C-A | 7222499-C-A | ** | |||||||
7086941-A-T | 7218900-A-T | ** | |||||||
22540536-G-A | 20378650-G-A | ** | |||||||
7079297-C-A | 7211256-C-A | ** | |||||||
7075022-A-C | 7206981-A-C | ** | |||||||
7031693-G-GA | 7163652-G-GA | 8×A | ** | ||||||
6940026-C-A | 7071985-C-A | ** | |||||||
6916969-A-C | 7048928-A-C | ** | |||||||
6827100-G-T | 6959059-G-T | ** | |||||||
6784310-C-A | 6916269-C-A | ** | |||||||
6767940-G-T | 6899899-G-T | ** | |||||||
6689471-C-A | 6821430-C-A | ** | |||||||
6676208-C-A | 6808167-C-A | ** | |||||||
6435682-G-T | 6567641-G-T | ** | |||||||
15658162-A-G | 13546282-A-G | ** | |||||||
22540529-T-C | 20378643-T-C | ** | |||||||
6385589-C-A | 6517548-C-A | ** | |||||||
8118329-C-G | 8250288-C-G | ** | |||||||
8441086-C-A | 8573045-C-A | ** | |||||||
13338128-G-C | 11182452-G-C | ** | |||||||
13338138-T-C | 11182462-T-C | ** | |||||||
8221319-C-A | 8353278-C-A | ** | |||||||
11031372-T-C | ** | ||||||||
8171023-C-A | 8302982-C-A | ** | |||||||
8130641-C-A | 8262600-C-A | ** | |||||||
8130613-T-C | 8262572-T-C | ** | |||||||
8124720-C-A | 8256679-C-A | ** | |||||||
8119478-C-G | 8251437-C-G | ** | |||||||
8117209-C-A | 8249168-C-A | ** | |||||||
7646403-T-A | 7778362-T-A | ** | |||||||
8092359-C-A | 8224318-C-A | ** | |||||||
8054663-C-A | 8186622-C-A | ** | |||||||
4577093-CAA-C | 4709052-CAA-C | 13×A | ** | ||||||
15658163-C-T | 13546283-C-T | ** | |||||||
8027060-C-A | 8159019-C-A | ** | |||||||
8001879-C-A | 8133838-C-A | ** | |||||||
8000841-C-A | 8132800-C-A | ** | |||||||
7916965-C-A | 8048924-C-A | ** | |||||||
7863735-C-A | 7995694-C-A | ** | |||||||
24616594-A-AG | 22470447-A-AG | P3_t2 | ** | ||||||
7701116-A-T | 7833075-A-T | ** | |||||||
6426861-C-A | 6558820-C-A | ** | |||||||
6114994-C-A | 6246953-C-A | ** | |||||||
56858744-T-A | ** | ||||||||
10760732-C-G | ** | ||||||||
28617740-A-G | 26471593-A-G | ** | |||||||
13489134-G-A | 11333458-G-A | ** | |||||||
10692341-C-A | ** | ||||||||
10791268-T-C | ** | ||||||||
10971970-TC-T | ** | ||||||||
19424267-A-G | 17312387-A-G | ** | |||||||
14105213-C-A | 11984507-C-A | ** | |||||||
18737472-C-A | 16625592-C-A | ** | |||||||
19678074-T-G | 17566194-T-G | P5_Prx | ** | ||||||
15538112-G-GA | 13426232-G-GA | 9×A | ** | ||||||
10974810-C-T | ** | ||||||||
10969969-C-CACCT | ** | ||||||||
9958941-C-A | 10121332-C-A | ** | |||||||
16047285-C-A | 13935405-C-A | ** | |||||||
24379033-A-G | 22232886-A-G | ** | |||||||
20426081-G-A | 18264195-G-A | P5_Dst | ** | ||||||
26467195-G-A | 24321048-G-A | P1_Y1 | ** | ||||||
19463643-C-A | 17351763-C-A | ** | |||||||
7137292-CAT-C | 7269251-CAT-C | ** | |||||||
4159974-C-A | 4291933-C-A | Y17182 | ** | ||||||
2687198-G-C | 2819157-G-C | CTS47 Z2220 PF5159 AM01359 | ** | ||||||
17324138-T-G | 15212258-T-G | ** | |||||||
21564193-C-CA | 19402307-C-CA | S450 | ** | ||||||
3407434-C-A | 3539393-C-A | ** | |||||||
23252809-C-A | 21090923-C-A | ** | |||||||
6114088-C-A | 6246047-C-A | ** | |||||||
4444789-C-T | 4576748-C-T | ** | |||||||
6050329-G-T | 6182288-G-T | ** | |||||||
5956895-C-A | 6088854-C-A | ** | |||||||
5924286-G-T | 6056245-G-T | ** | |||||||
5782146-C-A | 5914105-C-A | ** | |||||||
5586564-C-A | 5718523-C-A | ** | |||||||
5393471-T-C | 5525430-T-C | FT63950 | ** | ||||||
10622328-CAAAAAA-C | 20×A | ** | |||||||
5080531-C-A | 5212490-C-A | ** | |||||||
13326275-C-T | 11170599-C-T | ** | |||||||
13338127-G-C | 11182451-G-C | ** | |||||||
13338142-C-G | 11182466-C-G | ** | |||||||
13453248-CC-AT | 11297572-CC-AT | ** | |||||||
17781480-C-T | 15669600-C-T | ** | |||||||
4133555-C-A | 4265514-C-A | ** | |||||||
4069663-C-A | 4201622-C-A | ** | |||||||
4021696-C-A | 4153655-C-A | ** | |||||||
3689204-C-A | 3821163-C-A | ** | |||||||
3544384-C-A | 3676343-C-A | ** | |||||||
3436617-A-G | 3568576-A-G | ** | |||||||
2905846-C-A | 3037805-C-A | ** | |||||||
14862951-TG-T | 12751017-TG-T | ** | |||||||
16945359-T-C | 14833479-T-C | ** | |||||||
2800714-C-CT | 2932673-C-CT | 8×T | ** | ||||||
17268937-T-C | 15157057-T-C | ** | |||||||
8466171-A-T | 8598130-A-T | ** | |||||||
8216497-C-A | 8348456-C-A | ** | |||||||
22020628-C-A | 19858742-C-A | ** | |||||||
28588863-C-A | 26442716-C-A | ** | |||||||
10818708-C-A | ** | ||||||||
10815917-T-G | ** | ||||||||
10805616-G-T | ** | ||||||||
10803181-C-T | ** | ||||||||
10801673-A-AATTCT | ** | ||||||||
10791251-T-G | ** | ||||||||
10786043-C-A | ** | ||||||||
10781188-C-A | ** | ||||||||
10779422-C-A | ** | ||||||||
28560213-C-A | 26414066-C-A | ** | |||||||
10763280-C-CG | ** | ||||||||
10826896-T-G | ** | ||||||||
10763276-CA-C | ** | ||||||||
28617738-C-T | 26471591-C-T | ** | |||||||
10760735-T-G | ** | ||||||||
10760725-T-C | ** | ||||||||
10760715-T-A | ** | ||||||||
10759806-A-ACTGCT | ** | ||||||||
10747505-G-T | ** | ||||||||
10746505-T-G | ** | ||||||||
28617756-C-A | 26471609-C-A | ** | |||||||
28617775-TC-T | 26471628-TC-T | ** | |||||||
10687839-C-A | ** | ||||||||
10823851-C-A | ** | ||||||||
10826898-A-T | ** | ||||||||
10669509-C-CGGATG | ** | ||||||||
26730248-A-G | 24584101-A-G | P1_g2 | ** | ||||||
11027149-C-A | ** | ||||||||
25173658-A-G | 23027511-A-G | g1 | ** | ||||||
25902229-C-A | 23756082-C-A | P1_Y1 | ** | ||||||
11004428-T-G | ** | ||||||||
26345908-A-C | 24199761-A-C | P1_Y1 | ** | ||||||
10997190-C-A | ** | ||||||||
10988916-C-A | ** | ||||||||
10979614-T-C | ** | ||||||||
10979601-G-C | ** | ||||||||
10974616-TTCCAC-T | ** | ||||||||
26730233-GAA-G | 24584086-GAA-G | P1_g2 | ** | ||||||
10932747-C-A | ** | ||||||||
10826901-T-TTCCAA | ** | ||||||||
10931753-G-C | ** | ||||||||
10912469-C-A | ** | ||||||||
10899476-T-G | ** | ||||||||
10892565-T-TCTCC | ** | ||||||||
10859702-CTCGAT-C | ** | ||||||||
10849417-C-T | ** | ||||||||
10848083-A-T | ** | ||||||||
10842512-T-A | ** | ||||||||
10841091-C-A | ** | ||||||||
10839992-C-A | ** | ||||||||
10828244-C-A | ** | ||||||||
10673822-C-CCACGT | ** | ||||||||
10760705-T-C | ** | ||||||||
10669508-C-A | ** | ||||||||
9014261-A-G | 9176652-A-G | ** | |||||||
9602600-A-C | 9764991-A-C | IR3_Prx | ** | ||||||
9557584-A-AC | 9719975-A-AC | IR3_Prx | ** | ||||||
9516768-G-T | 9679159-G-T | ** | |||||||
9465263-C-A | 9627654-C-A | ** | |||||||
28773988-C-A | 26627841-C-A | ** | |||||||
9429914-C-A | 9592305-C-A | ** | |||||||
10669499-C-T | ** | ||||||||
9087335-C-A | 9249726-C-A | ** | |||||||
8987564-C-A | 9149955-C-A | ** | |||||||
9765473-C-A | 9927864-C-A | ** | |||||||
8856922-C-A | 8988881-C-A | ** | |||||||
8855219-A-C | 8987178-A-C | ** | |||||||
56724858-G-C | ** | ||||||||
8822427-C-A | 8954386-C-A | ** | |||||||
8776879-C-A | 8908838-C-A | ** | |||||||
8765931-A-C | 8897890-A-C | ** | |||||||
8750478-C-T | 8882437-C-T | ** | |||||||
8723622-C-A | 8855581-C-A | ** | |||||||
28770110-C-A | 26623963-C-A | ** | |||||||
9373552-C-A | 9535943-C-A | ** | |||||||
9772010-C-A | 9934401-C-A | ** | |||||||
9979259-A-T | 10141650-A-T | ** | |||||||
10647958-G-T | ** | ||||||||
28617785-C-A | 26471638-C-A | ** | |||||||
10647950-C-T | ** | ||||||||
10626475-C-A | ** | ||||||||
10625810-C-A | ** | ||||||||
28617788-G-T | 26471641-G-T | ** | |||||||
9997253-A-C | 10159644-A-C | ** | |||||||
10647997-C-A | ** | ||||||||
9941240-C-A | 10103631-C-A | ** | |||||||
9865413-C-A | 10027804-C-A | ** | |||||||
9810117-C-A | 9972508-C-A | ** | |||||||
28645735-A-T | 26499588-A-T | ** | |||||||
9832649-A-T | 9995040-A-T | ** | |||||||
23453444-C-A | 21291558-C-A | *** | |||||||
23430505-C-A | 21268619-C-A | *** | |||||||
22035921-C-A | 19874035-C-A | *** | |||||||
22474813-C-T | 20312927-C-T | FGC40171 | DYZ19 | *** | |||||
22160792-C-A | 19998906-C-A | *** | |||||||
23504866-C-A | 21342980-C-A | *** | |||||||
7411597-C-T | 7543556-C-T | *** | |||||||
56830173-C-A | *** | ||||||||
22876964-T-TAA | 20715078-T-TAA | 20×A | *** | ||||||
56830097-C-A | *** | ||||||||
23351487-A-AT | 21189601-A-AT | 9×T | *** | ||||||
22066140-G-A | 19904254-G-A | *** | |||||||
28477645-T-C | 26331498-T-C | *** | |||||||
23463276-G-T | 21301390-G-T | *** | |||||||
58982027-A-C | 56835880-A-C | *** | |||||||
2766688-A-AT | 2898647-A-AT | 9×T | *** | ||||||
23420924-C-A | 21259038-C-A | *** | |||||||
22200528-C-A | 20038642-C-A | *** | |||||||
23987086-C-A | 21840939-C-A | *** | |||||||
22212932-A-G | 20051046-A-G | *** | |||||||
22832633-C-A | 20670747-C-A | *** | |||||||
13338143-C-T | 11182467-C-T | *** | |||||||
28658256-C-A | 26512109-C-A | *** | |||||||
28687573-C-A | 26541426-C-A | *** | |||||||
13464553-G-T | 11308877-G-T | *** | |||||||
23207065-C-A | 21045179-C-A | *** | |||||||
23128401-C-A | 20966515-C-A | *** | |||||||
23963942-C-A | 21817795-C-A | *** | |||||||
19127737-A-G | 17015857-A-G | *** | |||||||
23996835-C-A | 21850688-C-A | *** | |||||||
8379330-C-T | 8511289-C-T | *** | |||||||
23435216-C-A | 21273330-C-A | *** | |||||||
22274977-G-T | 20113091-G-T | DYZ19 | *** | ||||||
28085802-A-G | 25939655-A-G | P1_Y2 | *** | ||||||
23542951-C-A | 21381065-C-A | *** | |||||||
28649992-C-A | 26503845-C-A | *** | |||||||
23059725-C-A | 20897839-C-A | *** | |||||||
26730255-A-C | 24584108-A-C | P1_g2 | *** | ||||||
56839342-G-T | *** | ||||||||
13846224-T-TGAATG | 11725518-T-TGAATG | 11×GAATG | *** | *** | |||||
21994680-C-A | 19832794-C-A | *** | |||||||
9674251-G-T | 9836642-G-T | IR3_Prx | *** | ||||||
8033938-C-A | 8165897-C-A | *** | |||||||
8040599-T-C | 8172558-T-C | *** | |||||||
8232148-C-A | 8364107-C-A | *** | |||||||
8374902-C-T | 8506861-C-T | *** | |||||||
8488097-C-A | 8620056-C-A | *** | |||||||
8622153-C-A | 8754112-C-A | *** | |||||||
8622765-C-A | 8754724-C-A | *** | |||||||
8675040-C-A | 8806999-C-A | *** | |||||||
8706675-CAGAGAG-C,CAGAG | 8838634-CAGAGAG-C,CAGAG | 15×AG | *** | ||||||
8753827-G-T | 8885786-G-T | *** | |||||||
8822877-A-G | 8954836-A-G | *** | |||||||
9439516-C-A | 9601907-C-A | *** | |||||||
9645653-CTTTTTT-C,CTTTTT | 9808044-CTTTTTT-C,CTTTTT | IR3_Prx | 20×T | *** | |||||
9764387-AAAAG-A | 9926778-AAAAG-A | 4×AAAG | *** | ||||||
7424062-C-A | 7556021-C-A | *** | |||||||
9770014-C-A | 9932405-C-A | *** | |||||||
9893198-C-A | 10055589-C-A | *** | |||||||
10021801-C-A | 10184192-C-A | *** | |||||||
10658337-C-A | *** | ||||||||
10691178-A-G | *** | ||||||||
10693980-C-A | *** | ||||||||
10763175-T-A | *** | ||||||||
10772433-T-A,C | *** | ||||||||
10772438-T-A,C | *** | ||||||||
10864333-C-A | *** | ||||||||
10916021-G-T | *** | ||||||||
10937417-C-A | *** | ||||||||
10964749-T-TTGGAC | *** | ||||||||
7762187-C-A | 7894146-C-A | 13×A | *** | ||||||
7424053-C-A | 7556012-C-A | *** | |||||||
11014343-A-T | *** | ||||||||
3836588-C-A | 3968547-C-A | *** | |||||||
8801361-AGAAG-A | 8933320-AGAAG-A | 6×GAAG | *** | ||||||
2948624-G-GTA | 3080583-G-GTA | *** | |||||||
2888870-CAA-C | 3020829-CAA-C | 32×A | *** | ||||||
3432966-T-TTA | 3564925-T-TTA | 10×TA | *** | ||||||
10887984-TTCCAC-T | *** | ||||||||
7783780-GAA-G,GA | 7915739-GAA-G,GA | 12×A | *** | ||||||
11003950-A-C | *** | ||||||||
14376298-C-A | 12255594-C-A | A12786 | *** | ||||||
8061561-C-A | 8193520-C-A | *** | |||||||
10999885-A-T | *** | ||||||||
2668316-A-T | 2800275-A-T | *** | |||||||
2824070-C-A | 2956029-C-A | FT197511 | *** | ||||||
2834161-CA-C | 2966120-CA-C | 9×A | *** | ||||||
4174852-C-A | 4306811-C-A | *** | |||||||
7389185-C-T | 7521144-C-T | *** | |||||||
4212795-C-A | 4344754-C-A | *** | |||||||
4769366-G-A | 4901325-G-A | *** | |||||||
4925703-C-A | 5057662-C-A | *** | |||||||
4931786-G-T | 5063745-G-T | *** | |||||||
5367220-C-A | 5499179-C-A | *** | |||||||
5999694-C-A | 6131653-C-A | *** | |||||||
6000559-G-T | 6132518-G-T | *** | |||||||
6693284-C-A | 6825243-C-A | *** | |||||||
6983026-C-A | 7114985-C-A | *** | |||||||
7011412-C-A | 7143371-C-A | *** | |||||||
7141943-C-A | 7273902-C-A | *** | |||||||
7183234-C-A | 7315193-C-A | *** | |||||||
7358040-C-A | 7489999-C-A | *** | |||||||
7389082-A-G | 7521041-A-G | *** | |||||||
11003966-A-C | *** | ||||||||
11014346-C-G | *** | ||||||||
21948726-T-A | 19786840-T-A | *** | |||||||
19523559-C-A | 17411679-C-A | *** | |||||||
17911862-C-A | 15799982-C-A | *** | |||||||
18222027-A-T | 16110147-A-T | *** | |||||||
18668092-C-A | 16556212-C-A | FT181473 | *** | ||||||
18693813-C-A | 16581933-C-A | *** | |||||||
18693979-C-A | 16582099-C-A | SK511 | *** | ||||||
18698528-C-A | 16586648-C-A | *** | |||||||
18761507-C-A | 16649627-C-A | *** | |||||||
18826956-C-A | 16715076-C-A | *** | |||||||
18832164-C-A | 16720284-C-A | *** | |||||||
19023409-C-A | 16911529-C-A | *** | |||||||
19050375-CTT-C,CT | 16938495-CTT-C,CT | 18×T | *** | ||||||
19221011-C-A | 17109131-C-A | *** | |||||||
19293933-C-A | 17182053-C-A | *** | |||||||
20066350-T-A | 17954470-T-A | P5_Gap | *** | ||||||
17703217-C-A | 15591337-C-A | *** | |||||||
20811813-C-A | 18649927-C-A | P4_Gap | *** | ||||||
21126205-C-A | 18964319-C-A | *** | |||||||
21133300-C-A | 18971414-C-A | *** | |||||||
21164435-C-A | 19002549-C-A | *** | |||||||
21175338-AT-A | 19013452-AT-A | 8×T | *** | ||||||
21189306-A-G | 19027420-A-G | *** | |||||||
21267639-C-A | 19105753-C-A | *** | |||||||
21468603-C-A | 19306717-C-A | *** | |||||||
21531614-C-A | 19369728-C-A | *** | |||||||
21561609-C-A | 19399723-C-A | *** | |||||||
21604488-C-A | 19442602-C-A | *** | |||||||
21706095-C-A | 19544209-C-A | *** | |||||||
21751690-C-A | 19589804-C-A | *** | |||||||
21925724-C-A | 19763838-C-A | Y20797 | *** | ||||||
17880250-C-A | 15768370-C-A | *** | |||||||
17655341-C-A | 15543461-C-A | *** | |||||||
13231879-C-A | 11076203-C-A | *** | |||||||
15309893-C-A | 13197998-C-A | *** | |||||||
13275405-C-A | 11119729-C-A | *** | |||||||
13294144-C-A | 11138468-C-A | *** | |||||||
13463663-C-A | 11307987-C-A | *** | |||||||
13478222-C-A,T | 11322546-C-A,T | *** | |||||||
13542477-C-A | 11386801-C-A | *** | |||||||
11643720-A-C | *** | ||||||||
13927583-C-A | 11806877-C-A | *** | |||||||
14385065-C-A | 12264361-C-A | *** | |||||||
14504794-AAAAAG-A | 12392999-AAAAAG-A | 4×AAAAG | *** | ||||||
14812066-AAAG-A | 12700137-AAAG-A | *** | |||||||
14817042-C-A | 12705113-C-A | BY97756 | *** | ||||||
14870429-G-T | 12758499-G-T | *** | |||||||
14879123-C-T | 12767193-C-T | *** | |||||||
15360537-C-A | 13248657-C-A | *** | |||||||
17438540-C-A | 15326660-C-A | *** | |||||||
15684982-C-A | 13573102-C-A | *** | |||||||
16071684-C-A | 13959804-C-A | *** | |||||||
16330508-C-A | 14218628-C-A | *** | |||||||
16481731-ATTTTT-A | 14369851-ATTTTT-A | 18×T | *** | ||||||
16744833-C-A | 14632953-C-A | *** | |||||||
16772435-AT-A,ATT | 14660555-AT-A,ATT | 17×T | *** | ||||||
16775971-C-A | 14664091-C-A | *** | |||||||
16888920-T-C | 14777040-T-C | *** | |||||||
16962272-C-A | 14850392-C-A | *** | |||||||
17040672-C-A | 14928792-C-A | *** | |||||||
17132962-C-A | 15021082-C-A | *** | |||||||
17210182-A-G | 15098302-A-G | *** | |||||||
17238346-C-A | 15126466-C-A | *** | |||||||
17276002-C-A | 15164122-C-A | *** | |||||||
28596472-A-G | 26450325-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 669937 | 8286932 | 6824789 | 6786913 |
Kit: 669937 | 14890597 | 9326782 | 8292659 |
Used in age calculations | 14890597 | 9326782 | 8292659 |
Counts of SNPs | 6 | 5 |
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