Howard
BigY2: 666368MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 666368 |
---|---|---|---|---|---|---|---|---|
15336048-AAGT-A | 13224166-AAGT-A | ** | ||||||
17218600-T-C | 15106720-T-C | ** | ||||||
17883764-C-A | 15771884-C-A | FT54267 | ** | |||||
17879471-A-C | 15767591-A-C | ** | ||||||
17864194-G-T | 15752314-G-T | ** | ||||||
17713828-G-T | 15601948-G-T | ** | ||||||
17648213-G-T | 15536333-G-T | ** | ||||||
17638290-C-A | 15526410-C-A | ** | ||||||
17572054-T-A | 15460174-T-A | ** | ||||||
17551900-C-A | 15440020-C-A | ** | ||||||
17419398-C-A | 15307518-C-A | ** | ||||||
17374784-T-G | 15262904-T-G | ** | ||||||
17317417-T-A | 15205537-T-A | ** | ||||||
17313389-G-T | 15201509-G-T | ** | ||||||
17242142-C-G | 15130262-C-G | ** | ||||||
17211595-C-A | 15099715-C-A | ** | ||||||
18261595-C-A | 16149715-C-A | ** | ||||||
17211120-A-T | 15099240-A-T | ** | ||||||
17093861-C-A | 14981981-C-A | ** | ||||||
16800807-A-T | 14688927-A-T | ** | ||||||
16766412-C-A | 14654532-C-A | ** | ||||||
16720190-A-T | 14608310-A-T | ** | ||||||
16720188-A-T | 14608308-A-T | ** | ||||||
16654837-A-C | 14542957-A-C | ** | ||||||
16628582-C-A | 14516702-C-A | ** | ||||||
16524826-A-C | 14412946-A-C | ** | ||||||
16492582-C-A | 14380702-C-A | ** | ||||||
16476359-C-A | 14364479-C-A | ** | ||||||
16418604-C-A | 14306724-C-A | ** | ||||||
16416811-C-A | 14304931-C-A | ** | ||||||
16373617-C-A | 14261737-C-A | ** | ||||||
18253959-C-A | 16142079-C-A | ** | ||||||
18270591-C-A | 16158711-C-A | ** | ||||||
16351812-G-T | 14239932-G-T | ** | ||||||
18872290-CTTTCTT-C | 16760410-CTTTCTT-C | ** | ||||||
19393320-C-A | 17281440-C-A | ** | ||||||
19377979-C-A | 17266099-C-A | ** | ||||||
19275299-A-C | 17163419-A-C | ** | ||||||
19258978-C-A | 17147098-C-A | ** | ||||||
19181560-A-T | 17069680-A-T | ** | ||||||
19181557-G-T | 17069677-G-T | ** | ||||||
19161091-C-A | 17049211-C-A | ** | ||||||
19138904-C-A | 17027024-C-A | ** | ||||||
19048056-A-C | 16936176-A-C | ** | ||||||
19043902-A-T | 16932022-A-T | ** | ||||||
19013705-G-T | 16901825-G-T | ** | ||||||
18924898-C-A | 16813018-C-A | ** | ||||||
18872325-C-A | 16760445-C-A | ** | ||||||
18871885-T-A | 16760005-T-A | ** | ||||||
18370552-T-A | 16258672-T-A | P6_Prx | ** | |||||
18852729-C-A | 16740849-C-A | ** | ||||||
18844028-C-A | 16732148-C-A | ** | ||||||
18826710-C-A | 16714830-C-A | ** | ||||||
18814810-C-A | 16702930-C-A | ** | ||||||
18806121-C-A | 16694241-C-A | ** | ||||||
18775568-T-G | 16663688-T-G | ** | ||||||
18768677-G-T | 16656797-G-T | ** | ||||||
18746887-C-A | 16635007-C-A | ** | ||||||
18741562-T-A | 16629682-T-A | ** | ||||||
18707190-C-A | 16595310-C-A | ** | ||||||
18611687-A-T | 16499807-A-T | ** | ||||||
18611685-G-T | 16499805-G-T | ** | ||||||
18605296-C-A | 16493416-C-A | ** | ||||||
18370607-A-C | 16258727-A-C | P6_Prx | ** | |||||
16354704-G-T | 14242824-G-T | ** | ||||||
16345087-C-A | 14233207-C-A | ** | ||||||
19413238-A-T | 17301358-A-T | ** | ||||||
14450501-C-A | 12329774-C-A | ** | ||||||
15128196-T-G | 13016283-T-G | ** | ||||||
15122550-C-A | 13010637-C-A | ** | ||||||
14998165-C-A | 12886250-C-A | ** | ||||||
14994408-G-T | 12882493-G-T | ** | ||||||
14994391-A-C | 12882476-A-C | ** | ||||||
14792739-T-G | 12680810-T-G | ** | ||||||
14762373-A-G | 12650442-A-G | ** | ||||||
14715087-C-A | 12603154-C-A | ** | ||||||
14656176-AAAG-A | 12544241-AAAG-A | ** | ||||||
14592652-T-A | 12480852-T-A | ** | ||||||
21713454-AC-A | 19551568-AC-A | ** | ||||||
14454989-T-A | 12334262-T-A | ** | ||||||
14451341-T-C | 12330614-T-C | ** | ||||||
14428746-C-A | 12308021-C-A | ** | ||||||
15171489-A-G | 13059575-A-G | ** | ||||||
14361984-C-A | 12241279-C-A | F18864 | ** | |||||
14356497-C-A | 12235792-C-A | ** | ||||||
14241174-C-A | 12120468-C-A | ** | ||||||
14177936-C-A | 12057230-C-A | ** | ||||||
14107351-C-A | 11986645-C-A | ** | ||||||
14107220-A-C | 11986514-A-C | ** | ||||||
14005915-A-G | 11885209-A-G | ** | ||||||
13962297-G-T | 11841591-G-T | ** | ||||||
13962291-C-A | 11841585-C-A | ** | ||||||
13948125-G-T | 11827419-G-T | ** | ||||||
13940735-C-A | 11820029-C-A | ** | ||||||
13939563-G-A | 11818857-G-A | ** | ||||||
13937454-C-A | 11816748-C-A | ** | ||||||
13899436-T-A | 11778730-T-A | ** | ||||||
15171459-T-C | 13059545-T-C | ** | ||||||
15171490-A-T | 13059576-A-T | ** | ||||||
16264936-C-A | 14153056-C-A | ** | ||||||
15911525-C-A | 13799645-C-A | ** | ||||||
16245022-T-A | 14133142-T-A | ** | ||||||
16226394-G-C | 14114514-G-C | ** | ||||||
16117516-G-T | 14005636-G-T | P8_Prx | ** | |||||
16056892-A-C | 13945012-A-C | ** | ||||||
16049070-C-A | 13937190-C-A | ** | ||||||
16039773-C-A | 13927893-C-A | ** | ||||||
16037134-C-A | 13925254-C-A | ** | ||||||
16035766-A-C | 13923886-A-C | ** | ||||||
16027828-T-C | 13915948-T-C | ** | ||||||
16006115-T-G | 13894235-T-G | ** | ||||||
15986644-C-A | 13874764-C-A | ** | ||||||
15967475-T-G | 13855595-T-G | ** | ||||||
15927877-T-A | 13815997-T-A | ** | ||||||
15831933-C-A | 13720053-C-A | ** | ||||||
15177453-C-A | 13065539-C-A | ** | ||||||
15816368-T-G | 13704488-T-G | ** | ||||||
15758688-G-T | 13646808-G-T | ** | ||||||
15735731-T-G | 13623851-T-G | ** | ||||||
15698488-T-A | 13586608-T-A | ** | ||||||
15677291-G-A | 13565411-G-A | ** | ||||||
15584133-G-A | 13472253-G-A | ** | ||||||
15579964-C-A | 13468084-C-A | ** | ||||||
15430456-T-G | 13318576-T-G | ** | ||||||
15420211-C-A | 13308331-C-A | ** | ||||||
15397407-A-C | 13285527-A-C | ** | ||||||
15333435-G-T | 13221553-G-T | ** | ||||||
15332376-A-T | 13220494-A-T | ** | ||||||
15302710-C-A | 13190809-C-A | ** | ||||||
15258884-C-A | 13146968-C-A | ** | ||||||
19411863-C-A | 17299983-C-A | ** | ||||||
19413240-A-T | 17301360-A-T | ** | ||||||
13882232-G-T | 11761526-G-T | ** | ||||||
24461643-C-A | 22315496-C-A | ** | ||||||
26000453-A-T | 23854306-A-T | P1_Y1 | ** | |||||
26000444-C-A | 23854297-C-A | P1_Y1 | ** | |||||
25980371-C-A | 23834224-C-A | P1_Y1 | ** | |||||
25953773-T-TA | 23807626-T-TA | P1_Y1 | ** | |||||
25931564-G-T | 23785417-G-T | P1_Y1 | ** | |||||
25931552-A-T | 23785405-A-T | P1_Y1 | ** | |||||
25246364-T-G | 23100217-T-G | P2_r1 | ** | |||||
25246355-T-G | 23100208-T-G | P2_r1 | ** | |||||
24880171-C-A | 22734024-C-A | g1 | ** | |||||
24878432-G-T | 22732285-G-T | g1 | ** | |||||
24614265-C-A | 22468118-C-A | P3_t2 | ** | |||||
24513619-C-A | 22367472-C-A | ** | ||||||
24494288-A-G | 22348141-A-G | ** | ||||||
24359551-G-T | 22213404-G-T | ** | ||||||
26000474-A-T | 23854327-A-T | P1_Y1 | ** | |||||
24286643-C-A | 22140496-C-A | P3_t1 | ** | |||||
24286637-C-A | 22140490-C-A | P3_t1 | ** | |||||
24286625-C-A | 22140478-C-A | P3_t1 | ** | |||||
24286622-C-G | 22140475-C-G | P3_t1 | ** | |||||
24286617-A-T | 22140470-A-T | P3_t1 | ** | |||||
24286598-A-T | 22140451-A-T | P3_t1 | ** | |||||
23801652-G-A | 21639766-G-A | ** | ||||||
23651629-C-A | 21489743-C-A | ** | ||||||
23509152-T-G | 21347266-T-G | ** | ||||||
23504092-C-A | 21342206-C-A | ** | ||||||
23455068-G-T | 21293182-G-T | ** | ||||||
23419008-A-G | 21257122-A-G | ** | ||||||
23317645-A-T | 21155759-A-T | ** | ||||||
23315968-C-A | 21154082-C-A | ** | ||||||
26000456-A-T | 23854309-A-T | P1_Y1 | ** | |||||
26000481-A-T | 23854334-A-T | P1_Y1 | ** | |||||
23185942-T-C | 21024056-T-C | ** | ||||||
28506063-CTTT-C | 26359916-CTTT-C | 11×T | ** | |||||
56835160-A-C | ** | |||||||
56741094-G-A | ** | |||||||
28798453-A-C | 26652306-A-C | ** | ||||||
28798060-G-T | 26651913-G-T | ** | ||||||
28779579-C-A | 26633432-C-A | ** | ||||||
28770429-C-A | 26624282-C-A | ** | ||||||
28764378-T-G | 26618231-T-G | ** | ||||||
28716281-C-A | 26570134-C-A | ** | ||||||
28712079-C-G | 26565932-C-G | ** | ||||||
28683837-G-T | 26537690-G-T | ** | ||||||
28583573-C-A | 26437426-C-A | ** | ||||||
28562288-C-G | 26416141-C-G | ** | ||||||
28556377-A-C | 26410230-A-C | ** | ||||||
28449522-C-A | 26303375-C-A | P1_gr2 | ** | |||||
26024706-G-T | 23878559-G-T | P1_Y1 | ** | |||||
28449518-C-A | 26303371-C-A | P1_gr2 | ** | |||||
28449516-G-T | 26303369-G-T | P1_gr2 | ** | |||||
28449515-A-T | 26303368-A-T | P1_gr2 | ** | |||||
28449513-A-T | 26303366-A-T | P1_gr2 | ** | |||||
28449494-A-T | 26303347-A-T | P1_gr2 | ** | |||||
28449492-A-T | 26303345-A-T | P1_gr2 | ** | |||||
27914984-T-A | 25768837-T-A | P1_Y2 | ** | |||||
27914972-G-T | 25768825-G-T | P1_Y2 | ** | |||||
27495162-A-C | 25349015-A-C | P1_Y2 | ** | |||||
26478108-A-G | 24331961-A-G | P1_Y1 | 19×AAAG | ** | ||||
26409329-T-G | 24263182-T-G | P1_Y1 | ** | |||||
26366436-G-T | 24220289-G-T | P1_Y1 | ** | |||||
26328592-C-A | 24182445-C-A | P1_Y1 | ** | |||||
26117860-A-T | 23971713-A-T | P1_Y1 | ** | |||||
23258136-C-A | 21096250-C-A | ** | ||||||
23185455-A-G | 21023569-A-G | ** | ||||||
19448369-A-G | 17336489-A-G | ** | ||||||
19957714-G-T | 17845834-G-T | P5_Prx | ** | |||||
20815885-A-C | 18653999-A-C | P4_Gap | ** | |||||
20807165-C-G | 18645279-C-G | P4_Gap | ** | |||||
20771944-T-G | 18610058-T-G | P4_Prx | ** | |||||
20506498-A-T | 18344612-A-T | P5_Dst | ** | |||||
20506495-C-A | 18344609-C-A | P5_Dst | ** | |||||
20506494-G-T | 18344608-G-T | P5_Dst | ** | |||||
20506485-G-T | 18344599-G-T | P5_Dst | ** | |||||
20506471-G-T | 18344585-G-T | P5_Dst | ** | |||||
20506470-G-C | 18344584-G-C | P5_Dst | ** | |||||
20506458-G-C | 18344572-G-C | P5_Dst | ** | |||||
20506449-C-T | 18344563-C-T | P5_Dst | ** | |||||
19957719-G-T | 17845839-G-T | P5_Prx | ** | |||||
19957717-G-T | 17845837-G-T | P5_Prx | ** | |||||
19957709-G-T | 17845829-G-T | P5_Prx | ** | |||||
21012152-A-C | 18850266-A-C | P4_Dst | ** | |||||
19957698-C-A | 17845818-C-A | P5_Prx | ** | |||||
19957676-C-A | 17845796-C-A | P5_Prx | ** | |||||
19957672-C-A | 17845792-C-A | P5_Prx | ** | |||||
19957655-G-T | 17845775-G-T | P5_Prx | ** | |||||
19800042-G-T | 17688162-G-T | P5_Prx | ** | |||||
19673694-A-T | 17561814-A-T | P5_Prx | ** | |||||
19673682-T-A | 17561802-T-A | P5_Prx | ** | |||||
19673681-T-G | 17561801-T-G | P5_Prx | ** | |||||
19673673-C-T | 17561793-C-T | P5_Prx | ** | |||||
19563293-A-C | 17451413-A-C | ** | ||||||
19536670-A-T | 17424790-A-T | ** | ||||||
19524716-T-G | 17412836-T-G | ** | ||||||
19509805-T-A | 17397925-T-A | ** | ||||||
19496237-C-A | 17384357-C-A | ** | ||||||
20861381-A-T | 18699495-A-T | P4_Dst | ** | |||||
21104872-C-A | 18942986-C-A | ** | ||||||
23142447-C-A | 20980561-C-A | ** | ||||||
22069581-C-A | 19907695-C-A | ** | ||||||
23128656-C-A | 20966770-C-A | ** | ||||||
23111714-C-A | 20949828-C-A | ** | ||||||
23061164-C-A | 20899278-C-A | ** | ||||||
23047665-A-C | 20885779-A-C | ** | ||||||
22963396-A-C | 20801510-A-C | ** | ||||||
22849613-C-A | 20687727-C-A | ** | ||||||
22760842-C-A | 20598956-C-A | ** | ||||||
22591898-A-T | 20430012-A-T | ** | ||||||
22591711-T-A | 20429825-T-A | ** | ||||||
22591643-T-A | 20429757-T-A | ** | ||||||
22564902-T-C | 20403016-T-C | ** | ||||||
22518402-A-C | 20356516-A-C | ** | ||||||
22165106-C-T | 20003220-C-T | Y22211 | ** | |||||
21932440-T-A | 19770554-T-A | ** | ||||||
21132830-C-A | 18970944-C-A | ** | ||||||
21920685-C-A | 19758799-C-A | ** | ||||||
21911311-C-A | 19749425-C-A | ** | ||||||
21909296-C-A | 19747410-C-A | ** | ||||||
21784995-A-G | 19623109-A-G | ** | ||||||
21742637-G-T | 19580751-G-T | ** | ||||||
21552089-C-A | 19390203-C-A | ** | ||||||
21551906-C-A | 19390020-C-A | ** | ||||||
21485908-T-G | 19324022-T-G | ** | ||||||
21457464-G-T | 19295578-G-T | ** | ||||||
21444514-C-A | 19282628-C-A | ** | ||||||
21300113-A-T | 19138227-A-T | ** | ||||||
21285576-C-A | 19123690-C-A | ** | ||||||
21187965-G-T | 19026079-G-T | ** | ||||||
21164552-C-A | 19002666-C-A | ** | ||||||
13884221-T-G | 11763515-T-G | ** | ||||||
14483729-T-A | 12362998-T-A | ** | ||||||
13865970-G-GAATGT | 11745264-G-GAATGT | ** | ||||||
7437370-G-T | 7569329-G-T | ** | ||||||
8283928-AT-A | 8415887-AT-A | ** | ||||||
8238280-A-G | 8370239-A-G | ** | ||||||
8238248-C-G | 8370207-C-G | ** | ||||||
8072215-C-A | 8204174-C-A | ** | ||||||
8051971-A-G | 8183930-A-G | ** | ||||||
8046504-C-A | 8178463-C-A | ** | ||||||
7896865-A-G | 8028824-A-G | ** | ||||||
7775476-C-A | 7907435-C-A | ** | ||||||
7774043-A-T | 7906002-A-T | ** | ||||||
7774040-A-T | 7905999-A-T | ** | ||||||
7664678-C-A | 7796637-C-A | ** | ||||||
7630011-C-A | 7761970-C-A | ** | ||||||
7505999-G-T | 7637958-G-T | IR1_L | ** | |||||
7430546-A-T | 7562505-A-T | ** | ||||||
8690512-C-A | 8822471-C-A | FT67393 | ** | |||||
7409726-C-A | 7541685-C-A | ** | ||||||
7389260-C-A | 7521219-C-A | ** | ||||||
7389126-G-T | 7521085-G-T | ** | ||||||
7311334-A-T | 7443293-A-T | ** | ||||||
7294601-C-A | 7426560-C-A | ** | ||||||
7285916-C-A | 7417875-C-A | ** | ||||||
7242552-A-T | 7374511-A-T | ** | ||||||
7224096-A-C | 7356055-A-C | ** | ||||||
7214292-T-G | 7346251-T-G | ** | ||||||
7201936-C-A | 7333895-C-A | FT75732 | ** | |||||
7189806-CTA-C | 7321765-CTA-C | ** | ||||||
7188370-G-A | 7320329-G-A | ** | ||||||
7150747-C-A | 7282706-C-A | ** | ||||||
8346769-C-A | 8478728-C-A | ** | ||||||
8699727-C-A | 8831686-C-A | ** | ||||||
6835530-A-G | 6967489-A-G | ** | ||||||
10671109-C-A | ** | |||||||
10756337-G-T | ** | |||||||
10756319-T-A | ** | |||||||
10756315-T-A | ** | |||||||
10755448-ATTACTGT-A | ** | |||||||
10755442-CATT-C | ** | |||||||
10746603-C-A | ** | |||||||
10745712-T-A | ** | |||||||
10745116-A-T | ** | |||||||
10745095-C-G | ** | |||||||
10745053-A-G | ** | |||||||
10745046-C-T | ** | |||||||
10693442-ATTCT-A | ** | |||||||
10686854-A-T | ** | |||||||
10624475-C-A | ** | |||||||
8974773-G-T | 9137164-G-T | ** | ||||||
10050704-C-A | 10213095-C-A | ** | ||||||
10034102-C-A | 10196493-C-A | ** | ||||||
10028727-T-C | 10191118-T-C | ** | ||||||
9978508-G-T | 10140899-G-T | ** | ||||||
13862378-T-A | 11741672-T-A | ** | ||||||
9952512-C-A | 10114903-C-A | ** | ||||||
9891143-C-A | 10053534-C-A | ** | ||||||
9849934-C-A | 10012325-C-A | ** | ||||||
9735582-T-A | 9897973-T-A | IR3_Prx | ** | |||||
9735525-G-C | 9897916-G-C | IR3_Prx | ** | |||||
9300135-A-G | 9462526-A-G | ** | ||||||
9139097-G-A | 9301488-G-A | ** | ||||||
8977711-A-T | 9140102-A-T | ** | ||||||
7141894-C-A | 7273853-C-A | ** | ||||||
6798702-C-A | 6930661-C-A | ** | ||||||
10764890-T-A | ** | |||||||
2687084-T-A | 2819043-T-A | ** | ||||||
3628638-A-T | 3760597-A-T | ** | ||||||
3602861-G-C | 3734820-G-C | ** | ||||||
3332170-C-A | 3464129-C-A | ** | ||||||
3327930-A-T | 3459889-A-T | ** | ||||||
3178289-A-T | 3310248-A-T | ** | ||||||
3178211-C-G | 3310170-C-G | ** | ||||||
2979313-G-A | 3111272-G-A | ** | ||||||
2814631-C-A | 2946590-C-A | ** | ||||||
2806251-G-C | 2938210-G-C | ** | ||||||
2785077-T-C | 2917036-T-C | ** | ||||||
2783663-A-T | 2915622-A-T | ** | ||||||
2772512-CAAA-C | 2904471-CAAA-C | 25×A | ** | |||||
2707000-C-A | 2838959-C-A | ** | ||||||
2683551-A-G | 2815510-A-G | ** | ||||||
3732265-A-C | 3864224-A-C | ** | ||||||
2669066-G-A | 2801025-G-A | ** | ||||||
2649800-CTCA-C | 2781759-CTCA-C | ** | ||||||
6829397-C-A | 6961356-C-A | ** | ||||||
3279760-C-A | 3411719-C-A | ** | ||||||
14844582-C-A | 12732648-C-A | ** | ||||||
10986465-A-T | ** | |||||||
10688055-C-T | ** | |||||||
16070120-C-A | 13958240-C-A | ** | ||||||
19231345-A-T | 17119465-A-T | ** | ||||||
10942479-A-T | ** | |||||||
9958108-C-A | 10120499-C-A | ** | ||||||
23840783-C-CA | 21678897-C-CA | 23840783-C-CA | 9×A | ** | ||||
14366754-C-A | 12246049-C-A | ** | ||||||
3641367-C-A | 3773326-C-A | ** | ||||||
3848600-C-A | 3980559-C-A | ** | ||||||
6772364-C-A | 6904323-C-A | ** | ||||||
5267453-C-A | 5399412-C-A | ** | ||||||
6698816-C-A | 6830775-C-A | ** | ||||||
6534757-G-A | 6666716-G-A | ** | ||||||
5926961-G-T | 6058920-G-T | ** | ||||||
5900043-T-A | 6032002-T-A | ** | ||||||
5900025-G-T | 6031984-G-T | ** | ||||||
5887651-C-A | 6019610-C-A | ** | ||||||
5873723-C-A | 6005682-C-A | ** | ||||||
5753996-C-A | 5885955-C-A | ** | ||||||
5710442-C-A | 5842401-C-A | ** | ||||||
5560166-C-A | 5692125-C-A | ** | ||||||
5462411-A-T | 5594370-A-T | ** | ||||||
5412166-C-A | 5544125-C-A | ** | ||||||
5316961-C-A | 5448920-C-A | ** | ||||||
5215846-T-A | 5347805-T-A | ** | ||||||
3848741-C-A | 3980700-C-A | ** | ||||||
4872368-C-A | 5004327-C-A | ** | ||||||
4781063-A-T | 4913022-A-T | ** | ||||||
4756657-A-T | 4888616-A-T | ** | ||||||
4585945-C-A | 4717904-C-A | ** | ||||||
4580698-C-A | 4712657-C-A | ** | ||||||
4537875-G-C | 4669834-G-C | ** | ||||||
4533788-T-C | 4665747-T-C | ** | ||||||
4389375-G-T | 4521334-G-T | ** | ||||||
4215683-G-T | 4347642-G-T | ** | ||||||
4172205-C-A | 4304164-C-A | ** | ||||||
4123525-G-C | 4255484-G-C | ** | ||||||
4070064-T-C | 4202023-T-C | ** | ||||||
4002551-C-A | 4134510-C-A | ** | ||||||
3951496-C-A | 4083455-C-A | ** | ||||||
10756357-T-C | ** | |||||||
9959966-C-A | 10122357-C-A | ** | ||||||
10764899-C-G | ** | |||||||
10976261-C-A | ** | |||||||
10999945-ATTCCT-A | ** | |||||||
10997954-C-A | ** | |||||||
10993860-C-A | ** | |||||||
10991533-C-A | ** | |||||||
10990193-G-T | ** | |||||||
10990189-G-A | ** | |||||||
10990160-T-C | ** | |||||||
10990153-T-A | ** | |||||||
10987331-T-C | ** | |||||||
10987328-C-G | ** | |||||||
10987293-C-G | ** | |||||||
10986592-C-T | ** | |||||||
10983962-T-TGCAA | ** | |||||||
10981348-C-A | ** | |||||||
10974045-T-TCCATTC | ** | |||||||
11013183-C-T | ** | |||||||
10971259-C-G | ** | |||||||
10971245-C-CGGAAG | ** | |||||||
10764927-A-C | ** | |||||||
10958853-T-A | ** | |||||||
10958828-T-A | ** | |||||||
10958788-T-A | ** | |||||||
10958342-TCCATTC-T | ** | |||||||
10958302-T-C | ** | |||||||
10953403-A-T | ** | |||||||
10944793-A-T | ** | |||||||
10944791-C-A | ** | |||||||
10942758-A-T | ** | |||||||
10942722-C-T | ** | |||||||
10942710-T-A | ** | |||||||
11008231-T-G | ** | |||||||
11014321-G-T | ** | |||||||
10942685-T-C | ** | |||||||
13545397-A-C | 11389721-A-C | ** | ||||||
13859581-A-T | 11738875-A-T | ** | ||||||
13857152-A-G | 11736446-A-G | ** | ||||||
13857151-A-G | 11736445-A-G | ** | ||||||
13857139-G-A | 11736433-G-A | ** | ||||||
13857137-G-A | 11736431-G-A | ** | ||||||
13857136-G-C | 11736430-G-C | ** | ||||||
13857124-A-T | 11736418-A-T | ** | ||||||
13857121-T-G | 11736415-T-G | ** | ||||||
13857117-C-T | 11736411-C-T | FT20710 | ** | |||||
11672949-A-C | ** | |||||||
11670898-G-T | ** | |||||||
11647009-C-A | ** | |||||||
13625201-C-A | 11469525-C-A | ** | ||||||
13556289-C-A | 11400613-C-A | ** | ||||||
13287152-C-A | 11131476-C-A | ** | ||||||
11022136-C-A | ** | |||||||
13255071-C-A | 11099395-C-A | ** | ||||||
13252461-C-A | 11096785-C-A | ** | ||||||
13249207-C-A | 11093531-C-A | ** | ||||||
13222102-G-T | 11066426-G-T | ** | ||||||
13207934-G-T | 11052258-G-T | ** | ||||||
13205354-A-ACT | 11049678-A-ACT | ** | ||||||
13205339-C-T | 11049663-C-T | ** | ||||||
13205337-T-G | 11049661-T-G | ** | ||||||
11038190-C-CACTAA | ** | |||||||
11038190-C-A | ** | |||||||
11032027-C-A | ** | |||||||
11030983-C-A | ** | |||||||
11027242-G-T | ** | |||||||
11025842-C-A | ** | |||||||
10942700-T-A | ** | |||||||
10971220-A-C | ** | |||||||
10942672-C-A | ** | |||||||
10799241-T-A | ** | |||||||
10881845-C-G | ** | |||||||
10870552-T-G | ** | |||||||
10839782-C-A | ** | |||||||
10826235-C-A | ** | |||||||
10814147-C-A | ** | |||||||
10813425-A-T | ** | |||||||
10800977-C-A | ** | |||||||
10800924-C-A | ** | |||||||
10799489-C-A | ** | |||||||
10799253-T-C | ** | |||||||
10799205-T-C | ** | |||||||
10884777-C-A | ** | |||||||
10794289-C-G | ** | |||||||
10785145-C-A | ** | |||||||
10783488-G-T | ** | |||||||
10776024-GC-G | ** | |||||||
10770846-T-A | ** | |||||||
10768157-T-A | ** | |||||||
10768147-A-T | ** | |||||||
10768140-C-T | ** | |||||||
10768126-C-A | ** | |||||||
10768101-C-T | ** | |||||||
10767831-C-A | ** | |||||||
10881861-A-T | ** | |||||||
10826259-T-A | ** | |||||||
9449-C-A | ** | |||||||
10942658-AC-A | ** | |||||||
10912273-T-A | ** | |||||||
10927626-C-G | ** | |||||||
10887315-C-G | ** | |||||||
10941200-C-A | ** | |||||||
10941639-T-G | ** | |||||||
10942506-G-C | ** | |||||||
10900260-T-G | ** | |||||||
10903051-A-T | ** | |||||||
21983608-C-A | 19821722-C-A | *** | ||||||
2800805-C-A | 2932764-C-A | Z15068 | *** | |||||
13513098-C-A | 11357422-C-A | *** | ||||||
13509403-C-A | 11353727-C-A | *** | ||||||
21950265-C-A | 19788379-C-A | *** | ||||||
2859262-G-T | 2991221-G-T | *** | ||||||
2907424-C-A | 3039383-C-A | *** | ||||||
7995557-G-T | 8127516-G-T | *** | ||||||
17864364-C-A | 15752484-C-A | *** | ||||||
22117829-C-A | 19955943-C-A | *** | ||||||
19340688-C-A | 17228808-C-A | *** | ||||||
14745320-A-C | 12633389-A-C | *** | ||||||
19377934-T-C | 17266054-T-C | *** | ||||||
10023950-C-A | 10186341-C-A | *** | ||||||
14887580-C-A | 12775646-C-A | *** | ||||||
14376969-C-A | 12256265-C-A | *** | ||||||
7360395-C-A | 7492354-C-A | *** | ||||||
21185196-T-G | 19023310-T-G | *** | ||||||
21890523-C-A | 19728637-C-A | *** | ||||||
28701459-C-A | 26555312-C-A | *** | ||||||
28698565-C-A | 26552418-C-A | *** | ||||||
18649721-C-A | 16537841-C-A | *** | ||||||
28596944-A-G | 26450797-A-G | *** | ||||||
23193369-GA-G | 21031483-GA-G | 10×A | *** | |||||
21814234-C-A | 19652348-C-A | *** | ||||||
16432616-C-A | 14320736-C-A | *** | ||||||
16094230-C-A | 13982350-C-A | *** | ||||||
14147589-C-A | 12026883-C-A | *** | ||||||
9871539-C-A | 10033930-C-A | *** | ||||||
18088684-C-A | 15976804-C-A | *** | ||||||
9972611-A-G | 10135002-A-G | *** | ||||||
14208889-C-A | 12088183-C-A | *** | ||||||
8459392-ATTAT-A | 8591351-ATTAT-A | 6×TTAT | *** | |||||
2690847-C-A | 2822806-C-A | *** | ||||||
6786566-C-A | 6918525-C-A | *** | ||||||
17528345-A-G | 15416465-A-G | *** | ||||||
8600009-CTT-C,CT | 8731968-CTT-C,CT | 13×T | *** | |||||
5708639-G-A | 5840598-G-A | *** | ||||||
8751412-T-C | 8883371-T-C | *** | ||||||
23312981-C-A | 21151095-C-A | *** | ||||||
8142674-C-A | 8274633-C-A | *** | ||||||
23205233-C-A | 21043347-C-A | *** | ||||||
23186420-C-A | 21024534-C-A | *** | ||||||
16874628-C-A | 14762748-C-A | *** | ||||||
8498338-CAAAAAA-C | 8630297-CAAAAAA-C | 16×A | *** | |||||
15592550-CAAAA-C,CAAAAA | 13480670-CAAAA-C,CAAAAA | 22×A | *** | |||||
17186726-TAAAA-T,TAAA | 15074846-TAAAA-T,TAAA | 19×A | *** | |||||
8287217-C-A | 8419176-C-A | *** | ||||||
22756146-C-A | 20594260-C-A | *** | ||||||
15976466-C-A | 13864586-C-A | *** | ||||||
23004049-G-A | 20842163-G-A | *** | ||||||
6759306-C-A | 6891265-C-A | *** | ||||||
22962273-T-C | 20800387-T-C | *** | ||||||
22962271-T-G | 20800385-T-G | *** | ||||||
23335909-C-A | 21174023-C-A | *** | ||||||
9029909-T-C | 9192300-T-C | *** | ||||||
17049952-T-C | 14938072-T-C | *** | ||||||
19538049-C-A | 17426169-C-A | *** | ||||||
15061231-A-G | 12949323-A-G | *** | ||||||
22174353-C-A | 20012467-C-A | BY163056 | *** | |||||
17387708-A-G | 15275828-A-G | *** | ||||||
7167482-C-A | 7299441-C-A | *** | ||||||
9789275-CGTGTGTGT-C,CGT | 9951666-CGTGTGTGT-C,CGT | 22×GT | *** | |||||
4243581-C-A | 4375540-C-A | *** | ||||||
17357243-C-A | 15245363-C-A | *** | ||||||
22562596-AAATA-A,AAATT | 20400710-AAATA-A,AAATT | *** | ||||||
9427692-C-T | 9590083-C-T | *** | ||||||
15462298-C-A | 13350418-C-A | *** | ||||||
9424292-C-A | 9586683-C-A | *** | ||||||
9399796-C-A | 9562187-C-A | *** | ||||||
21218736-GAA-G | 19056850-GAA-G | 11×A | *** | |||||
17303137-C-A | 15191257-C-A | *** | ||||||
23952839-G-T | 21806692-G-T | *** | ||||||
23855114-T-TA | 21693228-T-TA | 9×A | *** | |||||
9036011-A-G | 9198402-A-G | *** | ||||||
23782124-C-A | 21620238-C-A | *** | ||||||
15057613-C-A | 12945705-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 666368 | 8893958 | 7326426 | 7272129 |
Used in age calculations | 8893958 | 7326426 | 7272129 |
Counts of SNPs | 1 | 1 |
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