Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > BY3332 > BY22163 > BY22194 > BY35076 > BY35082 > BY51514

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
46619
BigY2
46619
25892291-A-G 23746144-A-G BY226451 P1_Y1 ***A*
13310362-C-T 11154686-C-T BY47051 ***+
7465445-A-G 7597404-A-G BY65390 IR1_L ++
19949608-G-GTT 17837728-G-GTT P5_Prx 16×T+
16607240-C-T 14495360-C-T Y96820 YY++
18603304-T-C 16491424-T-C BY122509 YY++
22039179-T-C 19877293-T-C BY137260 YY++
10817750-C-A **
13695555-G-T 11539879-G-T **
13606602-C-A 11450926-C-A **
13643788-A-T 11488112-A-T **
13695574-T-C 11539898-T-C **
13598992-A-G 11443316-A-G **
13698614-A-T 11542938-A-T **
13698627-A-T 11542951-A-T **
13723371-T-A 11567695-T-A **
13723380-T-A 11567704-T-A **
13723392-G-A 11567716-G-A **
23341371-G-T 21179485-G-T **
23290792-C-A 21128906-C-A **
11643987-G-T **
23373007-G-T 21211121-G-T **
13502557-A-G 11346881-A-G **
13557037-G-T 11401361-G-T **
13282294-T-G 11126618-T-G **
11038231-C-A **
23600230-C-A 21438344-C-A **
13207887-C-A 11052211-C-A **
13217247-T-TTA 11061571-T-TTA **
13225748-T-A 11070072-T-A **
13255383-A-T 11099707-A-T **
13255872-C-G 11100196-C-G **
13360162-C-A 11204486-C-A **
11646613-T-A **
13360205-C-A 11204529-C-A **
13360206-C-G 11204530-C-G **
13410542-C-A 11254866-C-A **
13429711-C-A 11274035-C-A **
13468012-A-T 11312336-A-T **
13493209-T-G 11337533-T-G **
13496680-A-C 11341004-A-C **
11644708-G-T **
13893368-C-A 11772662-C-A **
11663491-C-A **
14371413-T-G 12250709-T-G **
23210048-T-G 21048162-T-G **
14269528-G-T 12148822-G-T **
14292543-C-A 12171837-C-A **
14292556-C-A 12171850-C-A **
14292576-A-C 12171870-A-C **
14312112-C-A 12191406-C-A **
14458249-A-T 12337522-A-T **
14128437-T-G 12007731-T-G **
14490362-T-G 12369631-T-G **
12371192-C-A **
14554776-C-A 12442977-C-A **
14557140-C-A 12445341-C-A **
14586209-C-A 12474409-C-A **
14622790-C-A 12510988-C-A **
14212370-C-A 12091664-C-A **
14100173-G-T 11979467-G-T **
13800902-G-T 11680196-G-T **
13961661-C-A 11840955-C-A **
13860252-A-G 11739546-A-G **
11035284-A-G **
13901965-C-A 11781259-C-A **
13940308-T-A 11819602-T-A **
13940673-G-C 11819967-G-C **
13940716-G-T 11820010-G-T **
13963345-C-A 11842639-C-A **
14080229-C-A 11959523-C-A **
14011287-G-T 11890581-G-T **
23225523-C-A 21063637-C-A **
14023002-G-C 11902296-G-C **
14023030-A-C 11902324-A-C **
14034981-T-G 11914275-T-G **
14034986-A-C 11914280-A-C **
14035007-A-C 11914301-A-C **
11035299-C-G **
11000182-G-C **
11012413-C-A **
23837791-G-T 21675905-G-T **
24310285-T-G 22164138-T-G P3_t1 **
10820319-C-A **
10820384-C-A **
10821812-C-A **
10823987-C-A **
24283416-C-T 22137269-C-T BY226035 P3_t1 **
10834558-C-G **
10804996-T-C **
10837827-A-T **
10841980-A-ATTT **
10841996-C-G **
10842024-CGATAT-C **
10842047-T-C **
10846666-C-A **
10812343-T-G **
10799735-C-G **
10858507-C-A **
10767865-G-GCATTCTGTTCCATTC **
10751069-C-A **
10756559-C-A **
10756574-CATTCT-C **
10763215-C-A **
10766499-C-A **
10767858-T-TTCCATTCCAG **
10767871-C-T **
10797725-T-A **
10769465-C-A **
10772447-A-G **
10773007-C-A **
10773505-C-A **
10785863-T-G **
24389834-C-A 22243687-C-A **
10794823-C-A **
10849778-G-A **
10860684-T-A **
11012008-A-G **
10963230-C-T **
10939987-C-A **
10944715-T-A **
10946222-C-T **
10950454-C-G **
10950455-T-G **
10950509-T-TTCCTC **
10963824-G-T **
10934882-C-A **
10967513-C-G **
23837712-G-T 21675826-G-T **
10986386-T-G **
12675898-ATTTTTTTT-A 27×T**
11006691-C-A **
11007060-C-A **
10939939-A-T **
10929723-A-T **
10865277-C-A **
10885436-C-A **
10866509-C-A **
10867595-T-G **
10874450-C-A **
10879746-C-A **
10884930-C-T **
10885136-C-A **
10887584-C-A **
10922461-C-A **
10889785-C-TGGTTT **
10894461-C-A **
10900572-T-G **
10909704-T-C **
10914027-G-T **
10915648-A-C **
10921427-A-T **
14715750-G-T 12603817-G-T Y92038 **
15066140-T-G 12954232-T-G **
14986381-C-A 12874449-C-A **
20650595-A-T 18488709-A-T P4_Prx **
20277569-G-T 18115683-G-T P5_Dst **
20277570-A-T 18115684-A-T P5_Dst **
20314183-T-A 18152297-T-A P5_Dst **
20340659-G-T 18178773-G-T P5_Dst **
20424732-C-A 18262846-C-A P5_Dst **
20640272-G-T 18478386-G-T P4_Prx **
20650604-A-T 18488718-A-T P4_Prx **
20028237-A-C 17916357-A-C P5_Prx **
20650620-G-T 18488734-G-T P4_Prx **
20650624-C-G 18488738-C-G P4_Prx **
20650630-A-T 18488744-A-T P4_Prx **
20650634-A-T 18488748-A-T P4_Prx **
20692908-C-A 18531022-C-A P4_Prx **
20692924-A-T 18531038-A-T P4_Prx **
20277559-T-A 18115673-T-A P5_Dst **
20028218-A-T 17916338-A-T P5_Prx **
20762328-C-G 18600442-C-G P4_Prx **
19009390-C-T 16897510-C-T **
18429161-G-T 16317281-G-T P6_Dst **
18429197-A-AAT 16317317-A-AAT P6_Dst **
18766730-C-A 16654850-C-A **
18864546-C-T 16752666-C-T **
18879932-C-A 16768052-C-A **
18987043-G-T 16875163-G-T **
19031366-G-T 16919486-G-T **
19949645-A-T 17837765-A-T P5_Prx **
19127733-C-A 17015853-C-A **
19300400-C-A 17188520-C-A **
19302433-G-T 17190553-G-T **
19302582-G-T 17190702-G-T **
19460369-C-A 17348489-C-A **
19673505-A-T 17561625-A-T P5_Prx **
20751878-T-G 18589992-T-G P4_Prx **
20870531-C-A 18708645-C-A P4_Dst **
18345953-TAC-T 16234073-TAC-T P6_Prx **
22253090-G-C 20091204-G-C DYZ19 **
21911178-C-A 19749292-C-A **
21946389-A-T 19784503-A-T **
22091332-G-T 19929446-G-T **
22134218-C-A 19972332-C-A **
22168664-G-T 20006778-G-T **
22215257-C-G 20053371-C-G **
22253110-T-C 20091224-T-C DYZ19 **
21819287-C-A 19657401-C-A **
22253162-A-T 20091276-A-T DYZ19 **
22427491-C-A 20265605-C-A DYZ19 **
22518207-A-G 20356321-A-G **
22666090-G-T 20504204-G-T **
22692144-A-C 20530258-A-C **
22692348-C-A 20530462-C-A **
21824733-T-G 19662847-T-G **
21791482-C-T 19629596-C-T **
20870566-C-A 18708680-C-A P4_Dst **
21268147-C-A 19106261-C-A **
20888495-G-T 18726609-G-T P4_Dst **
21108340-G-T 18946454-G-T **
21108376-G-T 18946490-G-T **
21141270-C-A 18979384-C-A **
21154999-G-T 18993113-G-T **
21155063-C-A 18993177-C-A **
21297608-C-A 19135722-C-A **
21552795-T-A 19390909-T-A **
21320121-A-G 19158235-A-G **
21323558-C-G 19161672-C-G **
21325709-C-A 19163823-C-A **
21382618-C-A 19220732-C-A **
21427448-C-A 19265562-C-A **
21495580-C-A 19333694-C-A **
21522388-T-A 19360502-T-A **
18403133-C-A 16291253-C-A P6_Gap **
18345949-TAC-T 16234069-TAC-T P6_Prx **
14988971-A-T 12877037-A-T **
15788248-C-T 13676368-C-T **
15686872-G-C 13574992-G-C **
15699838-T-G 13587958-T-G **
15712082-G-T 13600202-G-T **
15743660-C-A 13631780-C-A **
15748955-C-A 13637075-C-A **
15788176-C-A 13676296-C-A **
15792969-A-C 13681089-A-C **
15565967-A-T 13454087-A-T **
15798169-C-A 13686289-C-A **
15942913-G-T 13831033-G-T **
15942977-T-G 13831097-T-G **
15987449-C-A 13875569-C-A **
16039175-C-A 13927295-C-A **
16044739-T-A 13932859-T-A **
15574921-G-A 13463041-G-A **
23019659-C-A 20857773-C-A **
16052154-T-A 13940274-T-A **
15189532-C-A 13077618-C-A **
14992609-C-A 12880694-C-A **
10749175-T-C **
15081299-C-A 12969389-C-A **
15150730-T-A 13038817-T-A **
15157479-T-A 13045566-T-A **
15179250-C-A 13067336-C-A **
15218668-G-T 13106754-G-T **
15504113-C-A 13392233-C-A **
15285744-T-A 13173843-T-A **
15355206-G-T 13243325-G-T **
15368623-C-A 13256743-C-A **
15401109-A-T 13289229-A-T **
15401165-T-A 13289285-T-A **
23097001-A-C 20935115-A-C **
15445538-C-A 13333658-C-A **
16046688-C-A 13934808-C-A **
16070755-C-A 13958875-C-A **
18324039-C-G 16212159-C-G P6_Prx **
17849820-C-A 15737940-C-A **
17466768-G-GAAA 15354888-G-GAAA 18×A**
17486200-C-A 15374320-C-A **
17492236-A-C 15380356-A-C **
17501330-G-T 15389450-G-T **
17538224-T-C 15426344-T-C **
17622769-A-C 15510889-A-C **
17884539-G-A 15772659-G-A **
17254758-C-A 15142878-C-A **
17886410-C-A 15774530-C-A **
18003097-T-A 15891217-T-A P7_Gap **
18086206-T-A 15974326-T-A **
18185544-T-G 16073664-T-G **
18309215-G-T 16197335-G-T P6_Prx **
18324005-A-T 16212125-A-T P6_Prx **
17402397-C-A 15290517-C-A **
17218442-A-C 15106562-A-C **
16271241-A-T 14159361-A-T **
16562864-T-A 14450984-T-A **
16354125-C-A 14242245-C-A **
16421335-T-A 14309455-T-A **
16432842-T-G 14320962-T-G **
16437438-A-C 14325558-A-C **
16462617-G-T 14350737-G-T **
16562843-T-A 14450963-T-A **
16652104-C-A 14540224-C-A **
17159580-C-A 15047700-C-A **
16678627-C-A 14566747-C-A **
16784448-T-C 14672568-T-C **
16993570-A-C 14881690-A-C **
17090840-T-G 14978960-T-G **
17098741-C-A 14986861-C-A **
17127151-A-T 15015271-A-T **
17127180-C-T 15015300-C-T **
10751058-C-G **
10749164-C-T **
10749174-T-A **
11011973-G-A **
10909711-A-G **
11011955-C-T **
10647352-T-A **
4358064-G-T 4490023-G-T **
13456691-C-A 11301015-C-A **
5200096-T-G 5332055-T-G **
11011994-G-A **
10841980-A-G **
4875416-G-T 5007375-G-T **
23875437-G-T 21713551-G-T **
7401995-C-A 7533954-C-A **
13460684-C-G 11305008-C-G **
28645812-C-A 26499665-C-A **
16114665-TTATA-T 14002785-TTATA-T P8_Prx 9×TA**
11035257-C-T **
4778369-C-A 4910328-C-A **
6580499-C-A 6712458-C-A **
8076109-C-A 8208068-C-A **
5221074-C-A 5353033-C-A **
9056443-C-A **
28529585-C-A 26383438-C-A **
10018299-C-A 10180690-C-A **
22171555-G-T 20009669-G-T **
4472399-C-A 4604358-C-A **
9190309-C-A 9352700-C-A **
23825064-ATTTTTT-A 21663178-ATTTTTT-A 25×T**
19532609-C-A 17420729-C-A **
21919404-C-A 19757518-C-A 16×T**
13273009-C-A 11117333-C-A **
10894789-G-T **
23837731-G-T 21675845-G-T **
9926734-C-A 10089125-C-A **
10668685-C-A **
16942104-C-A 14830224-C-A **
5246388-C-A 5378347-C-A **
2683417-C-A 2815376-C-A **
26391612-C-A 24245465-C-A P1_Y1 **
14036108-C-A 11915402-C-A **
19299207-C-A 17187327-C-A **
14099838-C-A 11979132-C-A **
2676869-C-A 2808828-C-A **
2683347-C-G 2815306-C-G **
2790309-T-G 2922268-T-G **
19610270-C-A 17498390-C-A P5_Prx **
2814834-T-G 2946793-T-G **
2950139-C-A 3082098-C-A **
2979655-T-G 3111614-T-G **
3015488-C-A 3147447-C-A **
3045617-C-A 3177576-C-A **
3048251-C-A 3180210-C-A **
14571268-C-A 12459468-C-A Y27054 **
7990881-C-A 8122840-C-A **
19298892-C-A 17187012-C-A **
27885141-A-T 25738994-A-T P1_Y2 **
11671690-C-A **
11031651-C-A **
10889792-T-A **
17306326-C-A 15194446-C-A **
27889297-ATATATAT-A 25743150-ATATATAT-A P1_Y2 **
10986371-T-A **
4159904-C-A 4291863-C-A **
8314166-T-C 8446125-T-C **
18381844-C-A 16269964-C-A P6_Gap **
15158294-C-A 13046380-C-A **
21201219-C-A 19039333-C-A **
10775822-G-T **
10889794-C-T **
17372323-A-C 15260443-A-C **
10782699-C-A **
4115029-C-A 4246988-C-A **
10693843-A-T **
10749169-T-C **
28667994-C-A 26521847-C-A **
28776704-A-T 26630557-A-T **
15422969-AAAAA-C 13311089-AAAAA-C **
16035328-C-A 13923448-C-A ****
28720922-C-A 26574775-C-A **
28700367-G-T 26554220-G-T **
28687960-G-T 26541813-G-T **
19673514-T-A 17561634-T-A P5_Prx **
13703226-G-C 11547550-G-C **
3599555-C-A 3731514-C-A **
5336829-G-T 5468788-G-T **
10841975-A-G **
10873368-C-A **
7110475-C-A 7242434-C-A **
13453278-C-A 11297602-C-A **
28802789-G-T 26656642-G-T **
56832162-C-A **
27966907-G-GTA 25820760-G-GTA P1_Y2 10×TA**
15495248-C-T 13383368-C-T FGC22756 **
15422968-CAAAA-C 13311088-CAAAA-C 14×A**
9909092-A-C 10071483-A-C **
56877729-G-T **
56862337-T-A **
13643010-C-A 11487334-C-A **
56862289-C-G **
14292560-G-T 12171854-G-T **
56835919-A-T **
56858019-G-T **
13860745-G-A 11740039-G-A **
13860748-T-C 11740042-T-C **
56841191-T-A **
56841122-A-C **
56835936-T-A **
13466396-T-A 11310720-T-A **
19673513-T-G 17561633-T-G P5_Prx **
10929756-T-C **
10894041-C-A **
9361093-C-A 9523484-C-A **
10749162-A-C **
10744206-G-T **
28006373-T-TAG 25860226-T-TAG P1_Y2 16×AC**
4222608-C-A 4354567-C-A **
13462345-A-C 11306669-A-C **
17737618-CAAA-C 15625738-CAAA-C 14×A**
15648814-C-A 13536934-C-A **
11004187-C-A **
10877532-C-A **
10939718-A-T **
14550126-C-A 12438327-C-A **
10884967-C-A **
5562369-C-A 5694328-C-A **
6582854-C-A 6714813-C-A **
11030223-C-T **
10849768-C-A **
28667844-G-T 26521697-G-T **
28486251-G-T 26340104-G-T **
10799562-TTCTATTTCATTCCTC-T **
28633131-C-A 26486984-C-A **
23050521-C-A 20888635-C-A **
26428127-C-A 24281980-C-A P1_Y1 **
20998386-T-A 18836500-T-A P4_Dst **
28565947-G-T 26419800-G-T **
28659689-C-A 26513542-C-A **
4873722-C-A 5005681-C-A **
28481285-A-T 26335138-A-T **
28464901-C-CTTT 26318754-C-CTTT 15×T**
2738763-C-A 2870722-C-A 17×T**
16041871-C-A 13929991-C-A **
27997470-A-AT 25851323-A-AT P1_Y2 **
28155853-G-T 26009706-G-T P1_b4 **
19949651-A-T 17837771-A-T P5_Prx **
3091836-T-C 3223795-T-C **
3092485-C-A 3224444-C-A **
3092698-T-G 3224657-T-G **
7160802-C-A 7292761-C-A **
6976391-GGA-G 7108350-GGA-G **
6978286-C-A 7110245-C-A **
7063774-A-C 7195733-A-C **
7063778-G-T 7195737-G-T **
7080097-C-A 7212056-C-A **
7114664-A-C 7246623-A-C **
7231442-A-T 7363401-A-T **
26243343-A-C 24097196-A-C P1_Y1 **
7309339-C-A 7441298-C-A **
7363435-C-A 7495394-C-A **
25995607-A-T 23849460-A-T P1_Y1 **
7650344-A-T 7782303-A-T **
7664407-C-A 7796366-C-A **
7717808-T-G 7849767-T-G **
6911536-C-A 7043495-C-A **
6714138-G-T 6846097-G-T **
7783183-T-G 7915142-T-G **
6277573-G-T 6409532-G-T IR3_Dst **
6092339-C-A 6224298-C-A **
6097288-A-C 6229247-A-C **
6170517-G-T 6302476-G-T IR3_Dst **
6170522-T-A 6302481-T-A IR3_Dst **
6170556-T-A 6302515-T-A IR3_Dst **
6202213-G-T 6334172-G-T IR3_Dst **
6290642-C-A 6422601-C-A IR3_Dst **
6651479-G-A 6783438-G-A **
6401630-G-C 6533589-G-C **
6401637-C-A 6533596-C-A **
6408748-G-C 6540707-G-C **
6408985-G-T 6540944-G-T **
6445399-C-A 6577358-C-A **
6509330-C-A 6641289-C-A **
6642097-G-T 6774056-G-T **
7753432-C-A 7885391-C-A **
7861800-A-C 7993759-A-C **
3112516-C-A 3244475-C-A **
10690121-T-G **
10630889-C-A 4×CCACT**
10630903-C-A **
10656499-C-A **
10671513-TC-T **
10677096-C-A **
25892213-GT-G 23746066-GT-G P1_Y1 **
25873879-A-T 23727732-A-T P1_Y1 **
10055621-A-T 10218012-A-T **
10692255-G-T **
10692521-C-A **
10693859-T-A **
10747880-A-T **
22851520-C-A 20689634-C-A **
10749165-T-A **
10055631-A-T 10218022-A-T **
10052154-C-A 10214545-C-A **
7898081-C-A 8030040-C-A **
9015463-C-A 9177854-C-A **
7939389-C-A 8071348-C-A **
7991021-T-C 8122980-T-C **
8073844-C-A 8205803-C-A **
8697787-G-T 8829746-G-T **
8855441-C-A 8987400-C-A **
8914571-C-A 9046530-C-A **
9117005-AAAAACATTATAATAGAAATAAT-A 9279396-AAAAACATTATAATAGAAATAAT-A **
9965178-G-T 10127569-G-T **
9348861-C-CA 9511252-C-CA **
9348876-T-A 9511267-T-A **
25988876-G-T 23842729-G-T P1_Y1 **
9440500-C-A 9602891-C-A **
9602644-T-G 9765035-T-G IR3_Prx **
9930124-C-T 10092515-C-T **
9945573-C-A 10107964-C-A **
6084538-G-T 6216497-G-T **
6018139-A-C 6150098-A-C **
6018128-A-C 6150087-A-C **
4178811-G-T 4310770-G-T **
3969111-T-A 4101070-T-A **
4016984-A-C 4148943-A-C **
4049014-C-A 4180973-C-A **
4094354-T-G 4226313-T-G **
4175151-A-C 4307110-A-C **
4178519-C-A 4310478-C-A **
4214885-C-G 4346844-C-G **
3820914-C-A 3952873-C-A **
4223508-C-A 4355467-C-A **
4223732-T-A 4355691-T-A **
4229392-A-T 4361351-A-T **
4254878-T-C 4386837-T-C **
4458119-G-T 4590078-G-T **
4458317-G-T 4590276-G-T **
3931315-G-T 4063274-G-T **
3770700-C-A 3902659-C-A **
6018125-A-T 6150084-A-T **
3559741-A-G 3691700-A-G **
3125297-C-G 3257256-C-G **
3148750-C-A 3280709-C-A **
3174355-C-A 3306314-C-A **
3178180-A-T 3310139-A-T **
3179071-C-A 3311030-C-A **
3516975-C-A 3648934-C-A **
3569226-G-T 3701185-G-T **
3711977-G-T 3843936-G-T **
3603312-T-A 3735271-T-A **
3681280-A-C 3813239-A-C **
3686597-G-T 3818556-G-T **
3686605-C-A 3818564-C-A **
3691505-A-G 3823464-A-G **
3705296-C-A 3837255-C-A **
4472448-T-C 4604407-T-C **
4504616-G-T 4636575-G-T **
4504634-T-A 4636593-T-A **
26243373-G-T 24097226-G-T P1_Y1 **
5336905-A-T 5468864-A-T **
5434603-C-A 5566562-C-A **
5435348-C-A 5567307-C-A **
5453249-G-T 5585208-G-T **
5560703-T-G 5692662-T-G **
5576855-C-G 5708814-C-G **
5612722-C-A 5744681-C-A **
4504647-T-G 4636606-T-G **
5621305-A-T 5753264-A-T **
5627801-T-G 5759760-T-G **
5669259-C-A 5801218-C-A **
5845263-A-C 5977222-A-C **
5870368-T-C 6002327-T-C **
5923483-C-A 6055442-C-A **
5976236-C-A 6108195-C-A **
5336873-T-C 5468832-T-C **
5267530-TGTAGAA-T 5399489-TGTAGAA-T **
5200118-A-T 5332077-A-T **
5172256-T-A 5304215-T-A **
4522023-C-A 4653982-C-A **
4553660-G-T 4685619-G-T **
4559295-T-A 4691254-T-A **
4559347-G-T 4691306-G-T **
4645812-T-A 4777771-T-A **
4756566-C-A 4888525-C-A **
4778381-C-A 4910340-C-A **
26243402-G-T 24097255-G-T P1_Y1 **
4890447-C-A 5022406-C-A **
4906500-C-A 5038459-C-A **
4925420-A-C 5057379-A-C **
4999697-C-A 5131656-C-A **
5022480-C-A 5154439-C-A **
5172218-T-A 5304177-T-A **
22842137-T-A 20680251-T-A **
56835923-C-G ***
24404563-T-C 22258416-T-C ***
27971726-CA-C,CAA 25825579-CA-C,CAA P1_Y2 27×A***
22287503-A-G 20125617-A-G DYZ19 ***
15565939-CAAA-C,CA 13454059-CAAA-C,CA 16×A***
13714371-G-C 11558695-G-C ***
11643785-A-G ***
18825629-CAA-C,CA 16713749-CAA-C,CA 20×A***
11643734-G-C ***
23274739-CTTT-C,CTT 21112853-CTTT-C,CTT 18×T***
13456901-C-A 11301225-C-A ***
25073693-G-A 22927546-G-A g1 ***
25026030-T-A 22879883-T-A g1 ***
25013589-A-G 22867442-A-G g1 ***
24722474-A-G 22576327-A-G P3_b2 ***
13714370-T-C 11558694-T-C ***
13570964-C-A 11415288-C-A ***
13476341-TAAA-T 11320665-TAAA-T ***
9943288-G-A 10105679-G-A ***
22484667-C-T 20322781-C-T DYZ19 ***
22768819-CTTTTT-C 20606933-CTTTTT-C 20×T***
13674737-A-T 11519061-A-T ***
16462516-G-T 14350636-G-T ***
22484672-C-A 20322786-C-A DYZ19 ***
23898785-G-A 21736899-G-A ***
22484658-A-G 20322772-A-G DYZ19 ***
22484614-G-A 20322728-G-A DYZ19 ***
14366295-C-A 12245590-C-A ***
14391874-TAAAA-T,TAA 12271170-TAAAA-T,TAA 15×A***
15420132-CAAAAA-C,CAAA 13308252-CAAAAA-C,CAAA 18×A***
10789387-T-G ***
14232359-C-A 12111653-C-A ***
14021216-T-G 11900510-T-G ***
11643767-T-C ***
11643762-T-C ***
13600884-C-A 11445208-C-A ***
13194903-T-TC 11039227-T-TC ***
10974017-C-T ***
10825243-T-A ***
10825234-C-G ***
22288774-T-G 20126888-T-G DYZ19 ***
10789345-CA-C ***
56846361-G-A ***
10691374-T-C,TGCCAC ***
10688075-C-A ***
9357069-C-T 9519460-C-T ***
7645202-ATTTT-A,ATTT 7777161-ATTTT-A,ATTT 17×T***
6765640-GTTT-G,GTTTTT 6897599-GTTT-G,GTTTTT 21×T***
5603674-C-A 5735633-C-A ***
4805030-C-A 4936989-C-A ***
22855090-G-T 20693204-G-T ***
13471972-T-A,C 11316296-T-A,C ***
10671978-C-A ***
16929-T-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 466191095345279924708090880
Kit: 46619997249581532228023739
Used in age calculations1095345281532228090880
Counts of SNPs33
Variant counts last updated 2019-08-07 00:57:22.



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