Pletcher

BigY2: 269087, FTDNA: 269087

Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > Z295/S1217 > S25783 > CTS4065 > 15548847GACAC-G > FGC15710 > CTS10029 > BY3190 > Y130729

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
269087		FTDNA
269087
22234175-G-T 20072289-G-T DYZ19 A****
26080940-A-T 23934793-A-T P1_Y1 A****
19577686-T-C 17465806-T-C P5_Prx YA*
19577696-C-T 17465816-C-T BY211842 P5_Prx YA*
19577706-A-T 17465826-A-T BY211843 P5_Prx YA*
19577718-A-C 17465838-A-C BY211845 P5_Prx YA*
13712773-G-A 11557097-G-A A*
19653450-T-TA 17541570-T-TA P5_Prx 9×AA*
2765173-A-G 2897132-A-G BY56332 YY++
2869329-A-C 3001288-A-C BY56931 YY++
2894283-T-G 3026242-T-G BY57175 YY++
6972230-C-T 7104189-C-T BY62647 YY++
7832153-TTCTG-T 7964112-TTCTG-T ++
8795893-T-A 8927852-T-A BY75957 YY++
9847287-C-A 10009678-C-A BY81400 YY++
13645966-G-T 11490290-G-T BY86867 ++
15181490-A-C 13069576-A-C BY100061 YY++
15829088-G-A 13717208-G-A BY104409 YY++
16744722-C-A 14632842-C-A BY109745 YY++
17514790-C-A 15402910-C-A BY115387 YY++
17809483-C-A 15697603-C-A BY117552 YY++
17945588-G-A 15833708-G-A BY118629 YY++
18414585-G-A 16302705-G-A FGC19712 Z23860 Y14016 P6_Gap ++
21472301-G-T 19310415-G-T Z1416 YY**+
22139620-A-C 19977734-A-C BY137935 YY++
22515432-C-A 20353546-C-A BY138608 Y++
23039992-C-A 20878106-C-A BY142489 YY++
23233819-G-A 21071933-G-A BY143873 Y++
23427571-G-A 21265685-G-A BY145226 YY++
23763932-G-A 21602046-G-A BY147517 Y++
24428622-A-G 22282475-A-G BY149831 Y++
21562329-TA-T 19400443-TA-T 9×A++
13470697-T-A 11315021-T-A ****
6373582-A-G 6505541-A-G FTB55003 ****
13868060-C-T 11747354-C-T *
13883884-A-T 11763178-A-T Y*
13960675-A-G 11839969-A-G M4664 PF5407 **
13654398-A-G 11498722-A-G **
17644385-C-A 15532505-C-A ****
10059515-C-A 10221906-C-A **
19543393-C-A 17431513-C-A ****
13821312-A-T 11700606-A-T **
13473797-C-A 11318121-C-A **
13480009-A-G 11324333-A-G **
3436452-A-G 3568411-A-G L799 ****
3436453-A-C 3568412-A-C L355 ****
7017951-T-TC 7149910-T-TC ****
15587746-C-A 13475866-C-A PR1911 ****
17839473-G-C 15727593-G-C CTS8112 ****
22428937-T-C 20267051-T-C DYZ19 *****
22961990-T-G 20800104-T-G FTB84047 6×TTG**
17218202-C-A 15106322-C-A **
16522306-CG-C 14410426-CG-C **
13482582-G-T 11326906-G-T **
7219239-G-A 7351198-G-A FT333764 **
14300267-G-T 12179561-G-T FGC63032 **
23818024-C-A 21656138-C-A **
24415769-TA-T 22269622-TA-T **
58974541-C-T 56828394-C-T **
21446310-C-A 19284424-C-A **
19811649-CAA-C 17699769-CAA-C P5_Prx 22×A**
19668723-G-A 17556843-G-A P5_Prx **
15236182-C-T 13124268-C-T FGC5029FGC5043 **
6698962-T-C 6830921-T-C **
13488505-G-A 11332829-G-A **
14389805-T-A 12269101-T-A **
7008302-CAAT-C 7140261-CAAT-C 11×AAT**
15585091-A-G 13473211-A-G **
14073541-C-A 11952835-C-A **
15040973-C-G 12929063-C-G **
15040980-T-A 12929070-T-A **
15040982-T-C 12929072-T-C **
10765238-T-C **
13485587-C-T 11329911-C-T **
13485598-G-T 11329922-G-T **
10923608-C-T **
19429832-C-A 17317952-C-A **
3836352-C-A 3968311-C-A **
8631408-TTG-T 8763367-TTG-T **
15599936-C-A 13488056-C-A **
22739695-C-G 20577809-C-G **
10959190-G-C **
16056907-C-G 13945027-C-G **
11657425-C-A **
24621257-TG-T 22475110-TG-T P3_t2 **
19110998-C-A 16999118-C-A **
7243169-C-A 7375128-C-A **
13473812-A-G 11318136-A-G **
17136893-C-A 15025013-C-A FT337231 **
5448773-C-A 5580732-C-A **
56685529-T-C **
28534554-C-CT 26388407-C-CT 9×T**
16188176-C-T 14076296-C-T **
11019423-C-CTAATG **
11019466-T-A **
13691881-C-A 11536205-C-A **
15193430-AT-A 13081516-AT-A 8×T**
16552783-C-A 14440903-C-A **
11676761-G-C **
9461740-C-A 9624131-C-A **
13258774-C-A 11103098-C-A **
15252779-C-A 13140865-C-A **
14754067-CTTTT-C 12642136-CTTTT-C 27×T**
19183843-G-GT 17071963-G-GT **
21211824-C-A 19049938-C-A FT25175 **
7341189-C-T 7473148-C-T **
10971945-T-C **
14088392-C-A 11967686-C-A **
7314322-C-A 7446281-C-A **
14198321-C-A 12077615-C-A **
8850332-C-A 8982291-C-A **
10994377-C-A **
10987812-T-TA **
10987814-CA-C **
10987827-T-TTA **
16232433-C-A 14120553-C-A **
24382053-A-G 22235906-A-G **
10997713-C-G **
10997724-C-CAATAT **
8314342-C-T 8446301-C-T **
10880339-C-CTCTTT **
11673614-G-C **
10689541-C-G **
10999975-A-T FT252845 **
14495730-C-CAA 12383927-C-CAA 11×A**
22659402-C-A 20497516-C-A **
11003972-T-C **
21462690-C-A 19300804-C-A **
6090932-C-A 6222891-C-A **
21111687-C-A 18949801-C-A **
28657516-C-A 26511369-C-A **
10994378-G-C **
10671033-T-G **
6782683-C-T 6914642-C-T Y132097 **
9312280-G-T 9474671-G-T **
18204216-G-T 16092336-G-T **
28781987-C-A 26635840-C-A **
16666119-T-C 14554239-T-C **
14741530-C-A 12629598-C-A Y92078 **
6734887-T-G 6866846-T-G **
10803826-T-C **
10803837-C-A **
7312635-A-G 7444594-A-G **
4936691-C-A 5068650-C-A **
11031632-G-T **
21084468-C-T 18922582-C-T **
21084473-A-C 18922587-A-C **
14774278-TTTTG-T 12662347-TTTTG-T **
13698528-G-T 11542852-G-T **
10803836-G-C **
22951102-C-CTT 20789216-C-CTT 13×T**
16507570-C-A 14395690-C-A **
11004437-TTC-GAA **
10796901-C-G **
10682578-A-T **
15410612-C-G 13298732-C-G **
16410213-C-A 14298333-C-A **
19293767-TC-T 17181887-TC-T **
5785883-C-A 5917842-C-A **
22079488-C-A 19917602-C-A **
8822680-C-A 8954639-C-A **
16205691-C-T 14093811-C-T **
3622185-C-A 3754144-C-A **
17494625-C-A 15382745-C-A **
16703659-G-T 14591779-G-T **
5459830-C-A 5591789-C-A **
17211692-C-A 15099812-C-A Y36750 **
4129660-C-A 4261619-C-A **
13194631-C-A 11038955-C-A **
23442806-C-A 21280920-C-A **
3032544-A-G 3164503-A-G **
10769852-GTTCCA-G **
7969461-G-T 8101420-G-T **
14098894-C-A 11978188-C-A **
7756204-C-A 7888163-C-A **
18080558-T-A 15968678-T-A **
21318402-A-C 19156516-A-C **
13319546-C-A 11163870-C-A **
6752635-C-A 6884594-C-A **
19318372-G-A 17206492-G-A **
7247568-T-C 7379527-T-C **
7247571-G-C 7379530-G-C **
16297424-C-A 14185544-C-A **
56756797-T-C **
21446406-T-A 19284520-T-A **
21446411-T-C 19284525-T-C **
21446412-G-A 19284526-G-A **
15866268-C-A 13754388-C-A 43×A**
20442454-A-AG 18280568-A-AG P5_Dst **
25524742-T-C 23378595-T-C P1_gr1 **
8913683-G-T 9045642-G-T **
56836123-C-A **
21407863-C-A 19245977-C-A **
14032574-C-A 11911868-C-A **
17826376-T-G 15714496-T-G **
18836234-G-A 16724354-G-A **
6877960-T-C 7009919-T-C **
18165635-C-A 16053755-C-A **
6888553-G-A 7020512-G-A **
8061733-C-A 8193692-C-A **
10988041-G-T **
19530334-C-A 17418454-C-A **
14047290-C-A 11926584-C-A **
10808637-A-C **
9979133-G-A 10141524-G-A **
8295387-C-A 8427346-C-A FTB39734 **
15863155-TAAAAAA-T 13751275-TAAAAAA-T 17×A**
7941748-C-A 8073707-C-A **
13234394-G-A 11078718-G-A **
11003957-T-C **
10928826-C-A **
10889735-T-A FGC78471 **
10889736-A-T **
12370671-C-A **
17863498-A-T 15751618-A-T **
7382483-A-C 7514442-A-C **
7382488-T-TC 7514447-T-TC **
18740817-C-A 16628937-C-A **
8269707-T-G 8401666-T-G FTB45126 **
17428225-C-A 15316345-C-A **
10860351-C-A **
5073746-C-A 5205705-C-A **
14568327-C-A 12456527-C-A **
13611095-C-A 11455419-C-A **
16056888-G-T 13945008-G-T **
16056903-G-A 13945023-G-A FT260918 **
28774387-C-A 26628240-C-A **
17301230-T-A 15189350-T-A **
9311340-G-T 9473731-G-T **
16018906-C-A 13907026-C-A **
23745436-G-T 21583550-G-T **
14546809-C-A 12435010-C-A **
15657125-TA-T 13545245-TA-T 8×A**
11031535-C-A **
21211807-C-A 19049921-C-A **
10009922-C-A 10172313-C-A **
23570325-C-A 21408439-C-A **
17302165-C-A 15190285-C-A **
7325699-G-T 7457658-G-T **
7382502-CA-C 7514461-CA-C **
6698947-A-T 6830906-A-T **
10988043-C-A **
10988044-C-G **
7042897-C-A 7174856-C-A **
5459785-G-A 5591744-G-A **
15424814-G-T 13312934-G-T **
8673682-C-A 8805641-C-A **
9873789-C-A 10036180-C-A **
3345570-C-A 3477529-C-A **
19370360-AT-A 17258480-AT-A 8×T**
28460888-C-A 26314741-C-A **
26201451-G-T 24055304-G-T P1_Y1 **
26454719-C-A 24308572-C-A P1_Y1 **
18984098-C-T 16872218-C-T **
2862782-C-A 2994741-C-A **
10682567-C-T **
10691088-A-C **
22128659-C-A 19966773-C-A **
28762609-C-A 26616462-C-A **
2684745-T-G 2816704-T-G **
2685097-C-A 2817056-C-A **
2688857-C-A 2820816-C-A **
2693364-C-T 2825323-C-T **
2697323-A-C 2829282-A-C **
2702694-C-A 2834653-C-A **
2707035-A-T 2838994-A-T **
2707040-G-T 2838999-G-T **
2707041-G-T 2839000-G-T **
2744747-G-T 2876706-G-T **
2745221-G-A 2877180-G-A **
2753134-C-A 2885093-C-A **
2762073-C-A 2894032-C-A **
2788194-T-C 2920153-T-C **
2790567-C-A 2922526-C-A **
2812968-A-G 2944927-A-G **
2853608-T-A 2985567-T-A **
2854955-C-A 2986914-C-A **
2873790-T-G 3005749-T-G **
2873965-G-T 3005924-G-T **
2884736-G-A 3016695-G-A **
2884797-G-C 3016756-G-C **
2971273-A-T 3103232-A-T **
2977532-C-A 3109491-C-A **
3012275-G-T 3144234-G-T **
3027426-A-G 3159385-A-G FTB78583 **
3046362-A-C 3178321-A-C **
3046373-T-C 3178332-T-C **
3092662-T-A 3224621-T-A **
3145038-C-T 3276997-C-T **
3164189-A-C 3296148-A-C **
3171902-CAAA-C 3303861-CAAA-C 13×A**
3194282-AT-A 3326241-AT-A 9×T**
3206641-G-T 3338600-G-T **
3250768-C-G 3382727-C-G **
3275822-T-A 3407781-T-A **
3337347-C-T 3469306-C-T **
3392298-G-T 3524257-G-T **
3437033-C-A 3568992-C-A **
3495198-A-G 3627157-A-G **
3546039-G-T 3677998-G-T **
3590953-C-A 3722912-C-A **
3683505-G-T 3815464-G-T **
3732698-G-C 3864657-G-C **
3865521-C-G 3997480-C-G **
3950913-C-G 4082872-C-G **
3987611-C-A 4119570-C-A **
4067493-A-T 4199452-A-T **
4138887-A-C 4270846-A-C **
4154555-G-T 4286514-G-T **
4208743-T-A 4340702-T-A **
4223280-C-A 4355239-C-A **
4244964-C-A 4376923-C-A **
4251033-CTTTTTTT-C 4382992-CTTTTTTT-C 24×T**
4374792-C-A 4506751-C-A **
4377725-A-C 4509684-A-C **
4425928-C-A 4557887-C-A **
4505240-A-C 4637199-A-C **
4505830-C-A 4637789-C-A **
4533728-T-G 4665687-T-G **
4604543-G-T 4736502-G-T **
4691804-C-A 4823763-C-A **
4699300-C-A 4831259-C-A **
4770192-T-A 4902151-T-A **
4788828-G-T 4920787-G-T **
4840258-G-T 4972217-G-T **
4840586-C-A 4972545-C-A **
4888185-C-A 5020144-C-A **
4889259-C-A 5021218-C-A **
4920338-T-A 5052297-T-A **
4929511-A-T 5061470-A-T **
4932033-A-C 5063992-A-C **
4961108-G-T 5093067-G-T **
4974109-A-G 5106068-A-G **
5073550-T-G 5205509-T-G **
5084756-C-A 5216715-C-A **
5186909-A-C 5318868-A-C **
5205051-C-A 5337010-C-A **
5220648-G-T 5352607-G-T **
5220999-T-TAAA 5352958-T-TAAA 10×A**
5241695-C-A 5373654-C-A **
5310639-A-G 5442598-A-G **
5471728-G-T 5603687-G-T **
5489164-C-A 5621123-C-A **
5622250-A-G 5754209-A-G **
5641587-G-T 5773546-G-T **
5641608-G-T 5773567-G-T **
5641609-G-T 5773568-G-T **
5645033-C-A 5776992-C-A **
5690878-G-A 5822837-G-A **
5713879-A-G 5845838-A-G **
5720761-C-A 5852720-C-A **
5755105-C-A 5887064-C-A **
5757235-C-A 5889194-C-A **
5761465-A-C 5893424-A-C **
5785968-C-A 5917927-C-A **
5867403-C-G 5999362-C-G **
5946321-G-T 6078280-G-T **
6103625-A-G 6235584-A-G **
6103632-G-T 6235591-G-T **
6115341-T-G 6247300-T-G **
6115400-G-C 6247359-G-C **
6115408-C-A 6247367-C-A **
6119366-C-A 6251325-C-A **
6119665-A-G 6251624-A-G **
6126486-A-C 6258445-A-C **
6130554-T-G 6262513-T-G **
6148587-C-A 6280546-C-A IR3_Dst **
6177611-C-A 6309570-C-A IR3_Dst **
6305853-C-A 6437812-C-A IR3_Dst **
6352028-A-C 6483987-A-C **
6360655-C-A 6492614-C-A **
6367416-A-C 6499375-A-C **
6384579-G-T 6516538-G-T **
6411024-C-A 6542983-C-A **
6512114-T-G 6644073-T-G **
6630587-C-A 6762546-C-A **
6646733-G-T 6778692-G-T **
6647930-C-A 6779889-C-A **
6654016-C-A 6785975-C-A **
6672445-G-T 6804404-G-T **
6692960-T-G 6824919-T-G **
6698948-G-A 6830907-G-A **
6698949-G-A 6830908-G-A **
6698958-C-T 6830917-C-T **
6707352-C-A 6839311-C-A **
6747034-A-C 6878993-A-C **
6748128-G-A 6880087-G-A **
6752641-T-G 6884600-T-G **
6764074-T-A 6896033-T-A **
6784546-G-A 6916505-G-A **
6784581-G-A 6916540-G-A **
6784582-T-A 6916541-T-A **
6789322-C-A 6921281-C-A **
6814712-C-A 6946671-C-A **
6839792-A-G 6971751-A-G **
6839798-T-A 6971757-T-A **
6850425-A-T 6982384-A-T **
6874787-C-G 7006746-C-G **
6881015-C-A 7012974-C-A **
6897486-A-G 7029445-A-G FT215364 **
6905553-G-A 7037512-G-A BY89 ZS1541 **
6910434-C-A 7042393-C-A **
6930490-A-C 7062449-A-C **
6976547-C-G 7108506-C-G **
6976552-C-T 7108511-C-T **
6995036-A-C 7126995-A-C **
6996795-T-G 7128754-T-G **
6996801-C-T 7128760-C-T **
7011555-A-C 7143514-A-C **
7013262-A-C 7145221-A-C **
7014638-T-G 7146597-T-G **
7020247-C-A 7152206-C-A **
7020315-C-A 7152274-C-A **
7029939-G-T 7161898-G-T **
7032886-A-G 7164845-A-G **
7058147-T-A 7190106-T-A **
7061306-C-A 7193265-C-A **
7083783-G-C 7215742-G-C **
7083787-C-CT 7215746-C-CT **
7095254-G-T 7227213-G-T **
7111661-T-G 7243620-T-G **
7130285-G-A 7262244-G-A **
7146073-G-A 7278032-G-A **
7151431-G-T 7283390-G-T **
7151439-G-T 7283398-G-T **
7154451-G-A 7286410-G-A **
7160408-A-C 7292367-A-C **
7170871-G-T 7302830-G-T **
7188215-C-A 7320174-C-A **
7188470-C-A 7320429-C-A **
7199481-G-T 7331440-G-T **
7211288-T-G 7343247-T-G **
7217415-C-A 7349374-C-A **
7233190-T-C 7365149-T-C **
7233193-A-G 7365152-A-G **
7247558-G-A 7379517-G-A FT218897 **
7247573-C-T 7379532-C-T **
7252128-A-C 7384087-A-C **
7252131-G-T 7384090-G-T **
7277413-A-C 7409372-A-C **
7309971-G-A 7441930-G-A **
7323727-C-A 7455686-C-A **
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27341611-A-C 25195464-A-C P1_g3 **
27507674-A-G 25361527-A-G P1_Y2 **
27762782-C-CCCGT 25616635-C-CCCGT P1_Y2 **
27791904-C-G 25645757-C-G P1_Y2 25×TCT**
27791983-T-TCTG 25645836-T-TCTG P1_Y2 **
27881469-T-A 25735322-T-A P1_Y2 **
28479718-C-A 26333571-C-A **
28506876-C-T 26360729-C-T **
28521188-A-G 26375041-A-G **
28521197-G-T 26375050-G-T **
28524825-A-G 26378678-A-G **
28536989-T-C 26390842-T-C **
28546919-G-T 26400772-G-T **
28546946-G-T 26400799-G-T **
28548067-C-A 26401920-C-A **
28558219-G-C 26412072-G-C **
28575298-T-C 26429151-T-C **
28581275-A-C 26435128-A-C **
28581298-A-C 26435151-A-C **
28583663-C-A 26437516-C-A **
28586434-C-A 26440287-C-A **
28590481-C-A 26444334-C-A **
28596722-T-A 26450575-T-A **
28598830-A-G 26452683-A-G **
28601047-G-A 26454900-G-A **
28622052-A-G 26475905-A-G **
28622144-T-C 26475997-T-C **
28622145-G-A 26475998-G-A **
28622214-G-T 26476067-G-T **
28631583-G-T 26485436-G-T **
28633112-C-A 26486965-C-A **
28645742-C-A 26499595-C-A **
28655614-C-T 26509467-C-T **
28656026-C-A 26509879-C-A **
28706750-A-C 26560603-A-C **
28733893-G-A 26587746-G-A **
28742003-T-C 26595856-T-C **
28745098-G-A 26598951-G-A **
28755702-A-C 26609555-A-C **
28759964-C-A 26613817-C-A **
28761177-A-T 26615030-A-T **
28761187-T-G 26615040-T-G **
28762586-C-T 26616439-C-T **
28762594-T-C 26616447-T-C **
28772865-GC-G 26626718-GC-G **
28780928-C-A 26634781-C-A **
28790162-A-C 26644015-A-C **
28800967-T-G 26654820-T-G **
28800982-T-G 26654835-T-G **
56750025-G-T **
56771158-G-T **
56771170-A-G **
56830826-ACTCCA-C **
56834926-T-A **
56846361-G-A **
56849143-G-T **
56850048-T-G **
56850574-A-G **
56877676-C-A **
35815-C-T **
9222464-C-A 9384855-C-A ***
13660285-A-G 11504609-A-G ***
13275600-T-C 11119924-T-C ***
13275601-A-T 11119925-A-T ***
13856705-G-A 11735999-G-A ***
19947235-G-T 17835355-G-T P5_Prx ***
19947236-A-C 17835356-A-C P5_Prx ***
19947238-G-T 17835358-G-T P5_Prx ***
13859918-T-G 11739212-T-G ***
28808174-T-G 26662027-T-G ZS4481 A3029 ***
5084606-C-T 5216565-C-T ***
14026036-A-G 11905330-A-G BY6826 ***
9989606-A-T 10151997-A-T ***
13294450-A-G 11138774-A-G ***
19947243-C-T 17835363-C-T P5_Prx ***
19947249-A-T 17835369-A-T P5_Prx ***
19947250-G-T 17835370-G-T P5_Prx ***
13727919-T-A 11572243-T-A ***
13862167-A-T 11741461-A-T ***
22428927-C-G 20267041-C-G DYZ19 ***
9654347-G-GA 9816738-G-GA IR3_Prx ***
18147509-C-CT 16035629-C-CT 28×T***
17781569-AT-A 15669689-AT-A ***
8026919-CTT-C 8158878-CTT-C 14×T***
22559226-G-A 20397340-G-A FGC28954 Y11609 F13512 ***
9839538-T-C 10001929-T-C ***
9983928-TC-T 10146319-TC-T ***
9989327-A-G 10151718-A-G ***
13488384-G-C 11332708-G-C ******
13697995-C-A 11542319-C-A ***
13697998-G-A 11542322-G-A ***
19967420-G-A 17855540-G-A P5_Prx ***
22489701-G-C 20327815-G-C DYZ19 ***
22506925-C-G 20345039-C-G DYZ19 ***
17794108-CCT-C 15682228-CCT-C ***
58905338-C-A 56685533-G-T ***
18890606-AAG-A 16778726-AAG-A ***
14772676-A-ATT 12660745-A-ATT 21×T***
2750581-G-A 2882540-G-A BY39001BY39001 ***
7359767-A-T 7491726-A-T ***
28801659-GTGGAA-G 26655512-GTGGAA-G 8×TGGAA***
13478734-G-T 11323058-G-T ***
10036545-T-A,C 10198936-T-A,C ***
15984459-T-TG 13872579-T-TG 10×G***
15951900-TTGTG-T 13840020-TTGTG-T 13×TG***
13473829-C-T 11318153-C-T ***
15612018-C-A 13500138-C-A ***
9094811-C-CATAT 9257202-C-CATAT 10×AT***
13447876-C-A 11292200-C-A ***
13483317-G-A 11327641-G-A ***
13811184-G-A 11690478-G-A ***
27791898-C-A 25645751-C-A P1_Y2 ***
14103251-ATATG-A 11982545-ATATG-A 6×TATG***
10889254-A-T ***
56861824-A-AAC ***
14026028-AAGAAAGAA-A,AAGAAAGAG 11905322-AAGAAAGAA-A,AAGAAAGAG ***
11643804-G-T ***
10769436-T-GGATGA ***
10934806-C-G ***
13483311-A-G 11327635-A-G ***
8555830-C-A 8687789-C-A ***
7426329-GCA-G 7558288-GCA-G ***
21238066-C-A 19076180-C-A ***
15622748-C-A 13510868-C-A ***
13489694-A-C 11334018-A-C ***
7336792-C-A 7468751-C-A ***
13868054-T-A 11747348-T-A ***
8399178-C-T 8531137-C-T FT19843 ***
2892542-ATTTTT-A 3024501-ATTTTT-A 18×T***
10934822-T-C ***
7097215-G-T 7229174-G-T ***
14487656-G-T 12366925-G-T ***
10934750-C-G ***
2788994-G-T 2920953-G-T ***
3046308-C-A 3178267-C-A ***
3343705-T-A 3475664-T-A ***
3500924-G-A 3632883-G-A ***
3834899-C-A 3966858-C-A ***
4412344-T-C 4544303-T-C ***
4473387-G-T 4605346-G-T ***
4788759-C-A 4920718-C-A ***
4968725-C-A 5100684-C-A ***
5200000-G-C 5331959-G-C FTB54856 ***
6399691-G-GA 6531650-G-GA 10×A***
6831796-C-A 6963755-C-A ***
7008587-C-A 7140546-C-A ***
7148013-CTTTTTTT-C 7279972-CTTTTTTT-C 17×T***
7153756-A-G 7285715-A-G ***
7251296-C-A 7383255-C-A ***
7270112-G-A 7402071-G-A ***
7287365-C-A 7419324-C-A ***
7371819-G-T 7503778-G-T ***
7426334-C-A 7558293-C-A ***
7542333-G-T 7674292-G-T ***
7636010-TAA-T,TA 7767969-TAA-T,TA 15×A***
7658464-C-A 7790423-C-A ***
7776670-A-G 7908629-A-G ***
7878009-C-A 8009968-C-A ***
7911286-G-T 8043245-G-T FTB35550 ***
8001450-C-A 8133409-C-A ***
8117227-G-T 8249186-G-T ***
8267166-C-A 8399125-C-A Y86320 ***
8334289-C-A 8466248-C-A ***
8427576-A-G 8559535-A-G ***
8575539-T-G 8707498-T-G ***
8635300-C-A 8767259-C-A ***
8798908-C-A 8930867-C-A ***
8846692-G-T 8978651-G-T ***
9110963-C-A ***
9075438-T-C 9237829-T-C ***
9097948-C-A 9260339-C-A ***
9140875-G-T 9303266-G-T ***
9386039-G-A 9548430-G-A ***
9404625-T-A 9567016-T-A ***
9418259-G-A 9580650-G-A ***
9654389-AGAAG-A,AGAAA 9816780-AGAAG-A,AGAAA IR3_Prx ***
9760593-G-A 9922984-G-A ***
9840049-G-T 10002440-G-T ***
9841925-C-A 10004316-C-A ***
9841940-T-C 10004331-T-C ***
9859552-C-A 10021943-C-A ***
9874104-C-A 10036495-C-A ***
9874376-G-A 10036767-G-A ***
9874820-G-T 10037211-G-T ***
10035322-C-A 10197713-C-A ***
10834371-C-T ***
10956594-C-CGGAAG,CGGATG ***
10965609-C-CTAATG ***
10993024-C-T ***
13194623-A-T 11038947-A-T ***
13194624-G-C 11038948-G-C ***
13218966-CAA-C,CA 11063290-CAA-C,CA 21×A***
13232663-C-A 11076987-C-A ***
13316589-C-A 11160913-C-A ***
13446667-C-A 11290991-C-A ***
13452027-C-A 11296351-C-A ***
13453339-C-A 11297663-C-A ***
13454098-T-A 11298422-T-A ***
13463795-A-T 11308119-A-T ***
13472995-C-T 11317319-C-T ***
13488244-C-A 11332568-C-A ***
13489686-C-A 11334010-C-A ***
13575927-T-A 11420251-T-A ***
13620628-G-A 11464952-G-A ***
13627043-G-A 11471367-G-A ***
13672568-A-T 11516892-A-T ***
13939548-G-A 11818842-G-A ***
14024350-C-A 11903644-C-A ***
14029644-C-A 11908938-C-A ***
14061991-T-G 11941285-T-G ***
14090810-T-C 11970104-T-C ***
14169285-C-A 12048579-C-A ***
14185839-C-A 12065133-C-A ***
14340707-C-A 12220002-C-A ***
14439287-C-A 12318560-C-A ***
14481589-C-A 12360858-C-A ***
14508868-C-A 12397073-C-A ***
14530979-G-T 12419180-G-T ***
14538143-C-A 12426344-C-A ***
14701798-A-T 12589864-A-T ***
14751513-C-A 12639582-C-A ***
14770003-C-A 12658072-C-A ***
14904165-G-A 12792232-G-A ***
14931673-TTA-T 12819738-TTA-T ***
14936929-T-A 12824994-T-A ***
14936932-G-T 12824997-G-T ***
14959452-C-A 12847527-C-A ***
15053734-C-A 12941825-C-A ***
15078252-C-A 12966342-C-A ***
15318856-C-A 13206962-C-A ***
15322592-CAGGA-C 13210710-CAGGA-C ***
15325221-C-A 13213339-C-A ***
15493320-C-A 13381440-C-A ***
15497916-C-A 13386036-C-A ***
15700201-T-C 13588321-T-C ***
15747835-G-T 13635955-G-T ***
15776641-C-A 13664761-C-A ***
15777362-C-A 13665482-C-A ***
15877611-CT-C 13765731-CT-C ***
15974329-C-A 13862449-C-A ***
16060225-A-G 13948345-A-G ***
16242893-C-A 14131013-C-A FT122018 ***
16326319-C-A 14214439-C-A ***
16405214-G-A 14293334-G-A ***
16524127-C-A 14412247-C-A ***
16716714-C-A 14604834-C-A ***
16782708-A-G 14670828-A-G ***
16905668-C-A 14793788-C-A ***
16938117-G-T 14826237-G-T ***
16962950-T-A 14851070-T-A ***
16962962-T-G 14851082-T-G ***
16982715-T-C 14870835-T-C ***
16983844-C-A 14871964-C-A ***
17091859-C-A 14979979-C-A BY112236 ***
17159383-C-A 15047503-C-A ***
17206807-C-A 15094927-C-A ***
17287349-C-A 15175469-C-A ***
17314382-C-A 15202502-C-A ***
17338688-C-A 15226808-C-A ***
17413137-C-A 15301257-C-A ***
17417644-C-A 15305764-C-A ***
17470233-G-T 15358353-G-T ***
17479463-G-A 15367583-G-A ***
17755865-G-T 15643985-G-T ***
17793129-A-AT 15681249-A-AT 9×T***
17914976-C-T 15803096-C-T ***
17960304-C-A 15848424-C-A ***
18073052-C-A 15961172-C-A ***
18175222-A-G 16063342-A-G ***
18175664-C-A 16063784-C-A ***
18267103-T-C 16155223-T-C ***
18564316-CTTT-C,CT 16452436-CTTT-C,CT 19×T***
18681561-C-A 16569681-C-A ***
18715585-T-A 16603705-T-A ***
18730271-C-A 16618391-C-A ***
18759098-C-T 16647218-C-T ***
18759107-C-G 16647227-C-G ***
18759114-T-G 16647234-T-G ***
18814794-G-T 16702914-G-T ***
18947526-C-A 16835646-C-A ***
19103880-G-GT,GTT 16992000-G-GT,GTT 13×T***
19205819-C-A 17093939-C-A ***
19508151-C-A 17396271-C-A ***
21090258-C-A 18928372-C-A ***
21259322-C-A 19097436-C-A ***
21282038-C-A 19120152-C-A ***
21362542-GAA-G,GA 19200656-GAA-G,GA 13×A***
21428210-G-A 19266324-G-A ***
21533656-T-C 19371770-T-C ***
21566859-C-A 19404973-C-A ***
21813913-C-A 19652027-C-A ***
21971989-C-A 19810103-C-A ***
22436893-G-T 20275007-G-T DYZ19 ***
22472472-T-G 20310586-T-G DYZ19 ***
22631483-C-A 20469597-C-A ***
22734168-G-T 20572282-G-T ***
22855361-C-A 20693475-C-A ***
22876037-G-A 20714151-G-A ***
23128902-AT-A 20967016-AT-A ***
23131206-C-A 20969320-C-A ***
23294106-A-G 21132220-A-G ***
23374399-T-C 21212513-T-C ***
23545679-G-A 21383793-G-A ***
23756687-G-A 21594801-G-A ***
23807861-T-C 21645975-T-C ***
23996798-C-T 21850651-C-T FTA43230 ***
24361177-C-A 22215030-C-A ***
24476297-C-G 22330150-C-G ***
27791862-T-C 25645715-T-C P1_Y2 ***
27791895-T-G 25645748-T-G P1_Y2 ***
27855115-G-T 25708968-G-T P1_Y2 ***
28234398-T-TTATA,TTATATATA 26088251-T-TTATA,TTATATATA P1_b4 18×TA***
28583306-C-A 26437159-C-A ***
56685550-GGAATG-G,GGAATA ***
56884277-G-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.